HEADER GENE REGULATION 05-DEC-12 4I9C TITLE CRYSTAL STRUCTURE OF ASPARTYL PHOSPHATE PHOSPHATASE F FROM B.SUBTILIS TITLE 2 IN COMPLEX WITH ITS INHIBITORY PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: RESPONSE REGULATOR ASPARTATE PHOSPHATASE F; COMPND 3 CHAIN: A; COMPND 4 EC: 3.1.-.-; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PHRF; COMPND 8 CHAIN: C; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 224308; SOURCE 4 STRAIN: 168; SOURCE 5 GENE: BSU37460, RAPF, YWHJ; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPROEX; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 OTHER_DETAILS: PEPTIDE PURCHASED FROM GENESCRIPT KEYWDS COMA INHIBITOR, PHRF, GENE REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR A.MARINA,F.GALLEGO REVDAT 2 20-MAR-24 4I9C 1 REMARK REVDAT 1 20-NOV-13 4I9C 0 JRNL AUTH F.GALLEGO DEL SOL,A.MARINA JRNL TITL STRUCTURAL BASIS OF RAP PHOSPHATASE INHIBITION BY PHR JRNL TITL 2 PEPTIDES JRNL REF PLOS BIOL. V. 11 01511 2013 JRNL REFN ISSN 1544-9173 JRNL PMID 23526880 JRNL DOI 10.1371/JOURNAL.PBIO.1001511 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.07 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 15637 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1332 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.18 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1037 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2960 REMARK 3 BIN FREE R VALUE SET COUNT : 78 REMARK 3 BIN FREE R VALUE : 0.2870 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3187 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 18 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 107.9 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 96.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.639 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.328 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.243 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 27.984 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3263 ; 0.015 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4378 ; 1.711 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 375 ; 5.744 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 178 ;39.226 ;24.101 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 612 ;23.887 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;18.057 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 442 ; 0.108 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2500 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 374 REMARK 3 ORIGIN FOR THE GROUP (A): 8.1290 42.1680 2.1060 REMARK 3 T TENSOR REMARK 3 T11: 0.0575 T22: 0.3038 REMARK 3 T33: 0.2581 T12: 0.1019 REMARK 3 T13: -0.0255 T23: -0.1018 REMARK 3 L TENSOR REMARK 3 L11: 2.6038 L22: 2.5880 REMARK 3 L33: 2.3856 L12: -0.0256 REMARK 3 L13: -0.4174 L23: -1.6173 REMARK 3 S TENSOR REMARK 3 S11: 0.0868 S12: 0.3829 S13: -0.4364 REMARK 3 S21: 0.1530 S22: 0.0893 S23: 0.0203 REMARK 3 S31: 0.0745 S32: 0.0588 S33: -0.1761 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4I9C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-DEC-12. REMARK 100 THE DEPOSITION ID IS D_1000076467. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-SEP-12; 23-SEP-10 REMARK 200 TEMPERATURE (KELVIN) : 80; NULL REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : ALBA; ESRF REMARK 200 BEAMLINE : XALOC; BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.07220; 1.07131 REMARK 200 MONOCHROMATOR : SI(111) CHANNEL-CUT; NULL REMARK 200 OPTICS : CHANNEL-CUT SI(111) + KB REMARK 200 FOCUSING MIRRORS; NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL; CCD REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M; MARMOSAIC REMARK 200 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16991 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 49.370 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 22.00 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : 0.09500 REMARK 200 FOR THE DATA SET : 31.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 22.30 REMARK 200 R MERGE FOR SHELL (I) : 0.26500 REMARK 200 R SYM FOR SHELL (I) : 0.26500 REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1M AMMONIUM SULPHATE, 17% GLYCEROL, REMARK 280 0.1M TRIS PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 25555 X+1/2,Y+1/2,Z+1/2 REMARK 290 26555 -X,-Y+1/2,Z REMARK 290 27555 -X+1/2,Y,-Z REMARK 290 28555 X,-Y,-Z+1/2 REMARK 290 29555 Z+1/2,X+1/2,Y+1/2 REMARK 290 30555 Z,-X,-Y+1/2 REMARK 290 31555 -Z,-X+1/2,Y REMARK 290 32555 -Z+1/2,X,-Y REMARK 290 33555 Y+1/2,Z+1/2,X+1/2 REMARK 290 34555 -Y+1/2,Z,-X REMARK 290 35555 Y,-Z,-X+1/2 REMARK 290 36555 -Y,-Z+1/2,X REMARK 290 37555 Y+1/4,X+3/4,-Z+3/4 REMARK 290 38555 -Y+1/4,-X+1/4,-Z+1/4 REMARK 290 39555 Y+3/4,-X+3/4,Z+1/4 REMARK 290 40555 -Y+3/4,X+1/4,Z+3/4 REMARK 290 41555 X+1/4,Z+3/4,-Y+3/4 REMARK 290 42555 -X+3/4,Z+1/4,Y+3/4 REMARK 290 43555 -X+1/4,-Z+1/4,-Y+1/4 REMARK 290 44555 X+3/4,-Z+3/4,Y+1/4 REMARK 290 45555 Z+1/4,Y+3/4,-X+3/4 REMARK 290 46555 Z+3/4,-Y+3/4,X+1/4 REMARK 290 47555 -Z+3/4,Y+1/4,X+3/4 REMARK 290 48555 -Z+1/4,-Y+1/4,-X+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 110.39550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 110.39550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 110.39550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 110.39550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 110.39550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 110.39550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 110.39550 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 110.39550 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 110.39550 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 110.39550 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 110.39550 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 110.39550 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 110.39550 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 110.39550 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 110.39550 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 110.39550 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 110.39550 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 110.39550 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 165.59325 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 55.19775 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 55.19775 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 165.59325 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 165.59325 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 165.59325 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 55.19775 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 55.19775 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 165.59325 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 55.19775 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 165.59325 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 55.19775 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 165.59325 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 55.19775 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 55.19775 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 55.19775 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 165.59325 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 55.19775 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 165.59325 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 165.59325 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 165.59325 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 55.19775 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 55.19775 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 165.59325 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 165.59325 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 55.19775 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 55.19775 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 55.19775 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 55.19775 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 165.59325 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 55.19775 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 165.59325 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 55.19775 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 165.59325 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 165.59325 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 165.59325 REMARK 290 SMTRY1 25 1.000000 0.000000 0.000000 110.39550 REMARK 290 SMTRY2 25 0.000000 1.000000 0.000000 110.39550 REMARK 290 SMTRY3 25 0.000000 0.000000 1.000000 110.39550 REMARK 290 SMTRY1 26 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 26 0.000000 -1.000000 0.000000 110.39550 REMARK 290 SMTRY3 26 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 27 -1.000000 0.000000 0.000000 110.39550 REMARK 290 SMTRY2 27 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 27 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 28 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 28 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 28 0.000000 0.000000 -1.000000 110.39550 REMARK 290 SMTRY1 29 0.000000 0.000000 1.000000 110.39550 REMARK 290 SMTRY2 29 1.000000 0.000000 0.000000 110.39550 REMARK 290 SMTRY3 29 0.000000 1.000000 0.000000 110.39550 REMARK 290 SMTRY1 30 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 30 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 30 0.000000 -1.000000 0.000000 110.39550 REMARK 290 SMTRY1 31 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 31 -1.000000 0.000000 0.000000 110.39550 REMARK 290 SMTRY3 31 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 32 0.000000 0.000000 -1.000000 110.39550 REMARK 290 SMTRY2 32 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 32 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 33 0.000000 1.000000 0.000000 110.39550 REMARK 290 SMTRY2 33 0.000000 0.000000 1.000000 110.39550 REMARK 290 SMTRY3 33 1.000000 0.000000 0.000000 110.39550 REMARK 290 SMTRY1 34 0.000000 -1.000000 0.000000 110.39550 REMARK 290 SMTRY2 34 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 34 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 35 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 35 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 35 -1.000000 0.000000 0.000000 110.39550 REMARK 290 SMTRY1 36 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 36 0.000000 0.000000 -1.000000 110.39550 REMARK 290 SMTRY3 36 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 37 0.000000 1.000000 0.000000 55.19775 REMARK 290 SMTRY2 37 1.000000 0.000000 0.000000 165.59325 REMARK 290 SMTRY3 37 0.000000 0.000000 -1.000000 165.59325 REMARK 290 SMTRY1 38 0.000000 -1.000000 0.000000 55.19775 REMARK 290 SMTRY2 38 -1.000000 0.000000 0.000000 55.19775 REMARK 290 SMTRY3 38 0.000000 0.000000 -1.000000 55.19775 REMARK 290 SMTRY1 39 0.000000 1.000000 0.000000 165.59325 REMARK 290 SMTRY2 39 -1.000000 0.000000 0.000000 165.59325 REMARK 290 SMTRY3 39 0.000000 0.000000 1.000000 55.19775 REMARK 290 SMTRY1 40 0.000000 -1.000000 0.000000 165.59325 REMARK 290 SMTRY2 40 1.000000 0.000000 0.000000 55.19775 REMARK 290 SMTRY3 40 0.000000 0.000000 1.000000 165.59325 REMARK 290 SMTRY1 41 1.000000 0.000000 0.000000 55.19775 REMARK 290 SMTRY2 41 0.000000 0.000000 1.000000 165.59325 REMARK 290 SMTRY3 41 0.000000 -1.000000 0.000000 165.59325 REMARK 290 SMTRY1 42 -1.000000 0.000000 0.000000 165.59325 REMARK 290 SMTRY2 42 0.000000 0.000000 1.000000 55.19775 REMARK 290 SMTRY3 42 0.000000 1.000000 0.000000 165.59325 REMARK 290 SMTRY1 43 -1.000000 0.000000 0.000000 55.19775 REMARK 290 SMTRY2 43 0.000000 0.000000 -1.000000 55.19775 REMARK 290 SMTRY3 43 0.000000 -1.000000 0.000000 55.19775 REMARK 290 SMTRY1 44 1.000000 0.000000 0.000000 165.59325 REMARK 290 SMTRY2 44 0.000000 0.000000 -1.000000 165.59325 REMARK 290 SMTRY3 44 0.000000 1.000000 0.000000 55.19775 REMARK 290 SMTRY1 45 0.000000 0.000000 1.000000 55.19775 REMARK 290 SMTRY2 45 0.000000 1.000000 0.000000 165.59325 REMARK 290 SMTRY3 45 -1.000000 0.000000 0.000000 165.59325 REMARK 290 SMTRY1 46 0.000000 0.000000 1.000000 165.59325 REMARK 290 SMTRY2 46 0.000000 -1.000000 0.000000 165.59325 REMARK 290 SMTRY3 46 1.000000 0.000000 0.000000 55.19775 REMARK 290 SMTRY1 47 0.000000 0.000000 -1.000000 165.59325 REMARK 290 SMTRY2 47 0.000000 1.000000 0.000000 55.19775 REMARK 290 SMTRY3 47 1.000000 0.000000 0.000000 165.59325 REMARK 290 SMTRY1 48 0.000000 0.000000 -1.000000 55.19775 REMARK 290 SMTRY2 48 0.000000 -1.000000 0.000000 55.19775 REMARK 290 SMTRY3 48 -1.000000 0.000000 0.000000 55.19775 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 SER A 375 REMARK 465 LEU A 376 REMARK 465 TYR A 377 REMARK 465 GLU A 378 REMARK 465 ILE A 379 REMARK 465 GLU A 380 REMARK 465 VAL A 381 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CG2 ILE A 14 CE1 TYR A 52 1.54 REMARK 500 OD1 ASP A 83 N LEU A 84 1.61 REMARK 500 O ASP A 83 N LEU A 86 2.05 REMARK 500 CG GLN A 263 OH TYR A 300 2.19 REMARK 500 CB LEU A 70 O ASN A 256 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 69 C - N - CD ANGL. DEV. = -14.9 DEGREES REMARK 500 LYS A 72 N - CA - C ANGL. DEV. = -19.6 DEGREES REMARK 500 ARG A 165 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 44 -11.61 61.68 REMARK 500 GLU A 76 66.04 -154.55 REMARK 500 ARG A 80 -23.58 92.68 REMARK 500 LYS A 196 -3.15 77.07 REMARK 500 GLN A 197 70.02 -65.36 REMARK 500 SER A 236 -1.43 63.61 REMARK 500 SER A 313 11.20 80.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN C OF PHRF REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4I9E RELATED DB: PDB DBREF 4I9C A 1 381 UNP P71002 RAPF_BACSU 1 381 DBREF 4I9C C 44 48 PDB 4I9C 4I9C 44 48 SEQRES 1 A 381 MET THR GLY VAL ILE SER SER SER SER ILE GLY GLU LYS SEQRES 2 A 381 ILE ASN GLU TRP TYR MET TYR ILE ARG ARG PHE SER ILE SEQRES 3 A 381 PRO ASP ALA GLU TYR LEU ARG ARG GLU ILE LYS GLN GLU SEQRES 4 A 381 LEU ASP GLN MET GLU GLU ASP GLN ASP LEU HIS LEU TYR SEQRES 5 A 381 TYR SER LEU MET GLU PHE ARG HIS ASN LEU MET LEU GLU SEQRES 6 A 381 TYR LEU GLU PRO LEU GLU LYS MET ARG ILE GLU GLU GLN SEQRES 7 A 381 PRO ARG LEU SER ASP LEU LEU LEU GLU ILE ASP LYS LYS SEQRES 8 A 381 GLN ALA ARG LEU THR GLY LEU LEU GLU TYR TYR PHE ASN SEQRES 9 A 381 PHE PHE ARG GLY MET TYR GLU LEU ASP GLN ARG GLU TYR SEQRES 10 A 381 LEU SER ALA ILE LYS PHE PHE LYS LYS ALA GLU SER LYS SEQRES 11 A 381 LEU ILE PHE VAL LYS ASP ARG ILE GLU LYS ALA GLU PHE SEQRES 12 A 381 PHE PHE LYS MET SER GLU SER TYR TYR TYR MET LYS GLN SEQRES 13 A 381 THR TYR PHE SER MET ASP TYR ALA ARG GLN ALA TYR GLU SEQRES 14 A 381 ILE TYR LYS GLU HIS GLU ALA TYR ASN ILE ARG LEU LEU SEQRES 15 A 381 GLN CYS HIS SER LEU PHE ALA THR ASN PHE LEU ASP LEU SEQRES 16 A 381 LYS GLN TYR GLU ASP ALA ILE SER HIS PHE GLN LYS ALA SEQRES 17 A 381 TYR SER MET ALA GLU ALA GLU LYS GLN PRO GLN LEU MET SEQRES 18 A 381 GLY ARG THR LEU TYR ASN ILE GLY LEU CYS LYS ASN SER SEQRES 19 A 381 GLN SER GLN TYR GLU ASP ALA ILE PRO TYR PHE LYS ARG SEQRES 20 A 381 ALA ILE ALA VAL PHE GLU GLU SER ASN ILE LEU PRO SER SEQRES 21 A 381 LEU PRO GLN ALA TYR PHE LEU ILE THR GLN ILE HIS TYR SEQRES 22 A 381 LYS LEU GLY LYS ILE ASP LYS ALA HIS GLU TYR HIS SER SEQRES 23 A 381 LYS GLY MET ALA TYR SER GLN LYS ALA GLY ASP VAL ILE SEQRES 24 A 381 TYR LEU SER GLU PHE GLU PHE LEU LYS SER LEU TYR LEU SEQRES 25 A 381 SER GLY PRO ASP GLU GLU ALA ILE GLN GLY PHE PHE ASP SEQRES 26 A 381 PHE LEU GLU SER LYS MET LEU TYR ALA ASP LEU GLU ASP SEQRES 27 A 381 PHE ALA ILE ASP VAL ALA LYS TYR TYR HIS GLU ARG LYS SEQRES 28 A 381 ASN PHE GLN LYS ALA SER ALA TYR PHE LEU LYS VAL GLU SEQRES 29 A 381 GLN VAL ARG GLN LEU ILE GLN GLY GLY VAL SER LEU TYR SEQRES 30 A 381 GLU ILE GLU VAL SEQRES 1 C 5 GLN ARG GLY MET ILE FORMUL 3 HOH *18(H2 O) HELIX 1 1 SER A 6 ARG A 23 1 18 HELIX 2 2 SER A 25 GLU A 44 1 20 HELIX 3 3 ASP A 46 GLU A 68 1 23 HELIX 4 4 ARG A 80 LYS A 91 1 12 HELIX 5 5 GLN A 92 THR A 96 5 5 HELIX 6 6 GLY A 97 GLN A 114 1 18 HELIX 7 7 GLU A 116 LYS A 130 1 15 HELIX 8 8 LEU A 131 VAL A 134 5 4 HELIX 9 9 ASP A 136 MET A 154 1 19 HELIX 10 10 GLN A 156 GLU A 173 1 18 HELIX 11 11 TYR A 177 LEU A 195 1 19 HELIX 12 12 GLN A 197 LYS A 216 1 20 HELIX 13 13 GLN A 217 GLN A 235 1 19 HELIX 14 14 GLN A 237 SER A 255 1 19 HELIX 15 15 SER A 260 LEU A 275 1 16 HELIX 16 16 LYS A 277 ALA A 295 1 19 HELIX 17 17 ASP A 297 LEU A 312 1 16 HELIX 18 18 ASP A 316 LYS A 330 1 15 HELIX 19 19 LEU A 332 ARG A 350 1 19 HELIX 20 20 ASN A 352 GLN A 371 1 20 CISPEP 1 GLN A 78 PRO A 79 0 -24.72 CISPEP 2 GLY A 314 PRO A 315 0 -12.25 SITE 1 AC1 19 TYR A 66 TYR A 152 TYR A 153 LYS A 155 SITE 2 AC1 19 GLN A 183 LEU A 187 ASP A 194 ARG A 223 SITE 3 AC1 19 TYR A 226 ASN A 227 SER A 260 GLN A 263 SITE 4 AC1 19 PHE A 266 TYR A 300 GLU A 303 ALA A 334 SITE 5 AC1 19 ASP A 335 ASP A 338 HOH A 413 CRYST1 220.791 220.791 220.791 90.00 90.00 90.00 I 41 3 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004529 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004529 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004529 0.00000