data_4IAG # _entry.id 4IAG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4IAG RCSB RCSB076507 WWPDB D_1000076507 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type TargetTrack MCSG-apc109219 . unspecified TargetTrack NATPRO-GO.119782 . unspecified # _pdbx_database_status.entry_id 4IAG _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-12-06 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cuff, M.E.' 1 'Bigelow, L.' 2 'Bruno, C.J.P.' 3 'Clancy, S.' 4 'Babnigg, G.' 5 'Bingman, C.A.' 6 'Yennamalli, R.' 7 'Lohman, J.' 8 'Ma, M.' 9 'Shen, B.' 10 'Phillips Jr., G.N.' 11 'Joachimiak, A.' 12 'Midwest Center for Structural Genomics (MCSG)' 13 'Enzyme Discovery for Natural Product Biosynthesis (NatPro)' 14 # _citation.id primary _citation.title ;Crystal Structure of the Zorbamycin-Binding Protein ZbmA, the Primary Self-Resistance Element in Streptomyces flavoviridis ATCC21892. ; _citation.journal_abbrev Biochemistry _citation.journal_volume 54 _citation.page_first 6842 _citation.page_last 6851 _citation.year 2015 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26512730 _citation.pdbx_database_id_DOI 10.1021/acs.biochem.5b01008 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Rudolf, J.D.' 1 primary 'Bigelow, L.' 2 primary 'Chang, C.' 3 primary 'Cuff, M.E.' 4 primary 'Lohman, J.R.' 5 primary 'Chang, C.Y.' 6 primary 'Ma, M.' 7 primary 'Yang, D.' 8 primary 'Clancy, S.' 9 primary 'Babnigg, G.' 10 primary 'Joachimiak, A.' 11 primary 'Phillips, G.N.' 12 primary 'Shen, B.' 13 # _cell.length_a 38.787 _cell.length_b 38.787 _cell.length_c 268.524 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 4IAG _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.entry_id 4IAG _symmetry.Int_Tables_number 179 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Zbm binding protein' 15015.371 1 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 8 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 water nat water 18.015 55 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNA(MSE)AVLLSGVPVLAALDVSTTQ(ILY)FWIEVLGFTEEFLTEDFGGVSRDGVELFICSVEDQVVPDNTQAWLRVR DIDALHAEWSARVSSDYADASHPA(MSE)TAIREVPWGREFGLRDPAGNLVHFSELSEAAETTRTVR ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAMAVLLSGVPVLAALDVSTTQXFWIEVLGFTEEFLTEDFGGVSRDGVELFICSVEDQVVPDNTQAWLRVRDIDALHAE WSARVSSDYADASHPAMTAIREVPWGREFGLRDPAGNLVHFSELSEAAETTRTVR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 'MCSG-apc109219, NATPRO-GO.119782' # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 MSE n 1 5 ALA n 1 6 VAL n 1 7 LEU n 1 8 LEU n 1 9 SER n 1 10 GLY n 1 11 VAL n 1 12 PRO n 1 13 VAL n 1 14 LEU n 1 15 ALA n 1 16 ALA n 1 17 LEU n 1 18 ASP n 1 19 VAL n 1 20 SER n 1 21 THR n 1 22 THR n 1 23 GLN n 1 24 ILY n 1 25 PHE n 1 26 TRP n 1 27 ILE n 1 28 GLU n 1 29 VAL n 1 30 LEU n 1 31 GLY n 1 32 PHE n 1 33 THR n 1 34 GLU n 1 35 GLU n 1 36 PHE n 1 37 LEU n 1 38 THR n 1 39 GLU n 1 40 ASP n 1 41 PHE n 1 42 GLY n 1 43 GLY n 1 44 VAL n 1 45 SER n 1 46 ARG n 1 47 ASP n 1 48 GLY n 1 49 VAL n 1 50 GLU n 1 51 LEU n 1 52 PHE n 1 53 ILE n 1 54 CYS n 1 55 SER n 1 56 VAL n 1 57 GLU n 1 58 ASP n 1 59 GLN n 1 60 VAL n 1 61 VAL n 1 62 PRO n 1 63 ASP n 1 64 ASN n 1 65 THR n 1 66 GLN n 1 67 ALA n 1 68 TRP n 1 69 LEU n 1 70 ARG n 1 71 VAL n 1 72 ARG n 1 73 ASP n 1 74 ILE n 1 75 ASP n 1 76 ALA n 1 77 LEU n 1 78 HIS n 1 79 ALA n 1 80 GLU n 1 81 TRP n 1 82 SER n 1 83 ALA n 1 84 ARG n 1 85 VAL n 1 86 SER n 1 87 SER n 1 88 ASP n 1 89 TYR n 1 90 ALA n 1 91 ASP n 1 92 ALA n 1 93 SER n 1 94 HIS n 1 95 PRO n 1 96 ALA n 1 97 MSE n 1 98 THR n 1 99 ALA n 1 100 ILE n 1 101 ARG n 1 102 GLU n 1 103 VAL n 1 104 PRO n 1 105 TRP n 1 106 GLY n 1 107 ARG n 1 108 GLU n 1 109 PHE n 1 110 GLY n 1 111 LEU n 1 112 ARG n 1 113 ASP n 1 114 PRO n 1 115 ALA n 1 116 GLY n 1 117 ASN n 1 118 LEU n 1 119 VAL n 1 120 HIS n 1 121 PHE n 1 122 SER n 1 123 GLU n 1 124 LEU n 1 125 SER n 1 126 GLU n 1 127 ALA n 1 128 ALA n 1 129 GLU n 1 130 THR n 1 131 THR n 1 132 ARG n 1 133 THR n 1 134 VAL n 1 135 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene zbmA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 21892' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptomyces flavoviridis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 66889 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG57 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B9UIZ4_9ACTO _struct_ref.pdbx_db_accession B9UIZ4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAVLLSGVPVLAALDVSTTQKFWIEVLGFTEEFLTEDFGGVSRDGVELFICSVEDQVVPDNTQAWLRVRDIDALHAEWSA RVSSDYADASHPAMTAIREVPWGREFGLRDPAGNLVHFSELSEAAETTRTVR ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4IAG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 135 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession B9UIZ4 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 132 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 132 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4IAG SER A 1 ? UNP B9UIZ4 ? ? 'EXPRESSION TAG' -2 1 1 4IAG ASN A 2 ? UNP B9UIZ4 ? ? 'EXPRESSION TAG' -1 2 1 4IAG ALA A 3 ? UNP B9UIZ4 ? ? 'EXPRESSION TAG' 0 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 ILY non-polymer n N~6~-propan-2-yl-L-lysine ? 'C9 H20 N2 O2' 188.267 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4IAG _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.97 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 37.45 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 4 _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;protein subject to reductive isopropylation, 0.8M Ammonium Sulfate, 0.1M Sodium Sitrate: HCl pH 4, VAPOR DIFFUSION, SITTING DROP, temperature 289K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.details ? _diffrn_detector.type 'ADSC QUANTUM 210r' _diffrn_detector.pdbx_collection_date 2012-08-03 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol SAD _diffrn_radiation.monochromator 'SAGITALLY FOCUSED Si(111)' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97929 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-BM' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97929 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-BM # _reflns.pdbx_chi_squared 1.225 _reflns.pdbx_scaling_rejects ? _reflns.limit_k_max ? _reflns.d_resolution_high 1.900 _reflns.observed_criterion_F_min ? _reflns.pdbx_netI_over_sigmaI 11.200 _reflns.observed_criterion_F_max ? _reflns.pdbx_Rmerge_I_obs 0.068 _reflns.limit_l_max ? _reflns.limit_k_min ? _reflns.entry_id 4IAG _reflns.B_iso_Wilson_estimate 28.2 _reflns.percent_possible_obs 98.500 _reflns.pdbx_Rsym_value ? _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.limit_l_min ? _reflns.limit_h_min ? _reflns.R_free_details ? _reflns.number_all 10484 _reflns.d_resolution_low 50.000 _reflns.pdbx_redundancy 9.700 _reflns.number_obs 10484 _reflns.limit_h_max ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.900 1.930 ? ? ? 0.434 ? ? 0.910 4.000 ? 460 87.500 1 1 1.930 1.970 ? ? ? 0.397 ? ? 0.846 4.300 ? 463 93.200 2 1 1.970 2.010 ? ? ? 0.372 ? ? 0.867 5.000 ? 472 95.400 3 1 2.010 2.050 ? ? ? 0.348 ? ? 0.770 6.000 ? 518 97.900 4 1 2.050 2.090 ? ? ? 0.315 ? ? 0.931 6.600 ? 496 99.800 5 1 2.090 2.140 ? ? ? 0.277 ? ? 0.847 8.200 ? 503 100.000 6 1 2.140 2.190 ? ? ? 0.223 ? ? 0.898 9.400 ? 512 100.000 7 1 2.190 2.250 ? ? ? 0.186 ? ? 0.980 9.800 ? 520 100.000 8 1 2.250 2.320 ? ? ? 0.178 ? ? 1.204 10.600 ? 509 100.000 9 1 2.320 2.390 ? ? ? 0.129 ? ? 0.988 11.700 ? 515 100.000 10 1 2.390 2.480 ? ? ? 0.117 ? ? 1.027 12.400 ? 512 100.000 11 1 2.480 2.580 ? ? ? 0.118 ? ? 1.153 12.400 ? 535 100.000 12 1 2.580 2.700 ? ? ? 0.105 ? ? 1.101 12.400 ? 521 100.000 13 1 2.700 2.840 ? ? ? 0.090 ? ? 1.202 12.200 ? 524 100.000 14 1 2.840 3.020 ? ? ? 0.074 ? ? 1.147 12.400 ? 536 100.000 15 1 3.020 3.250 ? ? ? 0.067 ? ? 1.420 11.800 ? 545 100.000 16 1 3.250 3.580 ? ? ? 0.055 ? ? 1.540 12.000 ? 539 100.000 17 1 3.580 4.090 ? ? ? 0.050 ? ? 1.524 11.100 ? 553 100.000 18 1 4.090 5.160 ? ? ? 0.047 ? ? 1.615 10.600 ? 587 99.700 19 1 5.160 50.000 ? ? ? 0.057 ? ? 2.184 8.900 ? 664 97.100 20 1 # _refine.ls_percent_reflns_R_free 4.8000 _refine.overall_SU_B 7.7000 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_R_Free_selection_details RANDOM _refine.overall_FOM_free_R_set ? _refine.pdbx_data_cutoff_low_absF ? _refine.entry_id 4IAG _refine.aniso_B[2][3] 0.0000 _refine.overall_SU_R_Cruickshank_DPI 0.1613 _refine.overall_SU_ML 0.1070 _refine.pdbx_ls_sigma_I ? _refine.aniso_B[1][3] 0.0000 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.aniso_B[3][3] -1.8400 _refine.occupancy_max 1.000 _refine.ls_number_restraints ? _refine.aniso_B[1][1] 0.5700 _refine.pdbx_overall_ESU_R 0.1610 _refine.ls_R_factor_obs 0.1913 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_starting_model ? _refine.ls_wR_factor_R_free 0.2317 _refine.ls_wR_factor_R_work 0.1832 _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_method_to_determine_struct SAD _refine.solvent_model_param_ksol ? _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.correlation_coeff_Fo_to_Fc 0.9590 _refine.ls_number_reflns_R_free 492 _refine.correlation_coeff_Fo_to_Fc_free 0.9480 _refine.pdbx_ls_sigma_F 0.000 _refine.ls_percent_reflns_obs 97.9900 _refine.ls_R_factor_R_work 0.1893 _refine.overall_SU_R_free 0.1483 _refine.ls_d_res_high 1.9000 _refine.pdbx_overall_ESU_R_Free 0.1480 _refine.B_iso_min 20.070 _refine.occupancy_min 0.500 _refine.B_iso_mean 38.2635 _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_R_factor_all 0.1913 _refine.aniso_B[2][2] 0.5700 _refine.B_iso_max 97.970 _refine.ls_d_res_low 32.5900 _refine.pdbx_overall_phase_error ? _refine.solvent_model_details MASK _refine.aniso_B[1][2] 0.5700 _refine.ls_R_factor_R_free 0.2314 _refine.ls_R_factor_R_free_error ? _refine.ls_number_reflns_obs 10243 _refine.overall_FOM_work_R_set 0.8678 _refine.ls_number_parameters ? _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED' _refine.ls_number_reflns_all 10243 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.solvent_model_param_bsol ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 946 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 38 _refine_hist.number_atoms_solvent 55 _refine_hist.number_atoms_total 1039 _refine_hist.d_res_high 1.9000 _refine_hist.d_res_low 32.5900 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1021 0.016 0.019 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 968 0.005 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1379 1.836 1.967 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 2219 1.398 3.011 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 126 6.092 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 47 35.801 23.830 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 140 13.403 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 7 29.541 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 156 0.109 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1133 0.008 0.021 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 232 0.001 0.020 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.9000 _refine_ls_shell.d_res_low 1.9490 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 90.0000 _refine_ls_shell.number_reflns_R_work 639 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2850 _refine_ls_shell.R_factor_R_free 0.3680 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 36 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 675 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4IAG _struct.title 'Crystal structure of ZbmA, the zorbamycin binding protein from Streptomyces flavoviridis' _struct.pdbx_descriptor 'Zbm binding protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.pdbx_keywords 'Zorbamycin Binding Protein' _struct_keywords.text ;Structural Genomics, PSI-Biology, Midwest Center for Structural Genomics, MCSG, Enzyme Discovery for Natural Product Biosynthesis, NatPro, BLMA_like, zorbamycin, reductive isopropylation, Zorbamycin Binding Protein ; _struct_keywords.entry_id 4IAG # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? K N N 4 ? # _struct_biol.id 1 _struct_biol.details 'Likely forms a dimer with the crystallographic symmetry mate: x,y,z and 1-y, 1-x, 1/6-z.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 18 ? VAL A 29 ? ASP A 15 VAL A 26 1 ? 12 HELX_P HELX_P2 2 VAL A 61 ? ASN A 64 ? VAL A 58 ASN A 61 5 ? 4 HELX_P HELX_P3 3 ASP A 73 ? ALA A 83 ? ASP A 70 ALA A 80 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ALA 96 C ? ? ? 1_555 A MSE 97 N ? ? A ALA 93 A MSE 94 1_555 ? ? ? ? ? ? ? 1.312 ? covale2 covale ? ? A MSE 97 C ? ? ? 1_555 A THR 98 N ? ? A MSE 94 A THR 95 1_555 ? ? ? ? ? ? ? 1.324 ? covale3 covale ? ? A ILY 24 C ? ? ? 1_555 A PHE 25 N ? ? A ILY 21 A PHE 22 1_555 ? ? ? ? ? ? ? 1.316 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 13 ? ALA A 16 ? VAL A 10 ALA A 13 A 2 VAL A 49 ? SER A 55 ? VAL A 46 SER A 52 A 3 PHE A 41 ? ARG A 46 ? PHE A 38 ARG A 43 A 4 THR A 33 ? THR A 38 ? THR A 30 THR A 35 B 1 GLN A 66 ? ARG A 70 ? GLN A 63 ARG A 67 B 2 LEU A 118 ? LEU A 124 ? LEU A 115 LEU A 121 B 3 GLY A 106 ? ARG A 112 ? GLY A 103 ARG A 109 B 4 ALA A 96 ? MSE A 97 ? ALA A 93 MSE A 94 C 1 GLN A 66 ? ARG A 70 ? GLN A 63 ARG A 67 C 2 LEU A 118 ? LEU A 124 ? LEU A 115 LEU A 121 C 3 GLY A 106 ? ARG A 112 ? GLY A 103 ARG A 109 C 4 ARG A 101 ? GLU A 102 ? ARG A 98 GLU A 99 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 14 ? N LEU A 11 O PHE A 52 ? O PHE A 49 A 2 3 O ILE A 53 ? O ILE A 50 N GLY A 42 ? N GLY A 39 A 3 4 O SER A 45 ? O SER A 42 N THR A 33 ? N THR A 30 B 1 2 N LEU A 69 ? N LEU A 66 O HIS A 120 ? O HIS A 117 B 2 3 O VAL A 119 ? O VAL A 116 N LEU A 111 ? N LEU A 108 B 3 4 O ARG A 112 ? O ARG A 109 N ALA A 96 ? N ALA A 93 C 1 2 N LEU A 69 ? N LEU A 66 O HIS A 120 ? O HIS A 117 C 2 3 O VAL A 119 ? O VAL A 116 N LEU A 111 ? N LEU A 108 C 3 4 O GLU A 108 ? O GLU A 105 N ARG A 101 ? N ARG A 98 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE EDO A 201' AC2 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE EDO A 202' AC3 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE GOL A 203' AC4 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE EDO A 204' AC5 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE EDO A 205' AC6 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE EDO A 206' AC7 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE EDO A 207' AC8 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE EDO A 208' AC9 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE EDO A 209' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 PRO A 12 ? PRO A 9 . ? 10_665 ? 2 AC1 8 PRO A 12 ? PRO A 9 . ? 1_555 ? 3 AC1 8 VAL A 13 ? VAL A 10 . ? 1_555 ? 4 AC1 8 VAL A 13 ? VAL A 10 . ? 10_665 ? 5 AC1 8 GLN A 66 ? GLN A 63 . ? 10_665 ? 6 AC1 8 GLN A 66 ? GLN A 63 . ? 1_555 ? 7 AC1 8 ALA A 67 ? ALA A 64 . ? 10_665 ? 8 AC1 8 ALA A 67 ? ALA A 64 . ? 1_555 ? 9 AC2 3 TRP A 68 ? TRP A 65 . ? 1_555 ? 10 AC2 3 ARG A 70 ? ARG A 67 . ? 1_555 ? 11 AC2 3 TRP A 105 ? TRP A 102 . ? 1_555 ? 12 AC3 5 PRO A 62 ? PRO A 59 . ? 1_555 ? 13 AC3 5 ASP A 63 ? ASP A 60 . ? 1_555 ? 14 AC3 5 THR A 65 ? THR A 62 . ? 1_555 ? 15 AC3 5 GLY A 116 ? GLY A 113 . ? 1_555 ? 16 AC3 5 LEU A 118 ? LEU A 115 . ? 1_555 ? 17 AC4 5 ALA A 79 ? ALA A 76 . ? 1_555 ? 18 AC4 5 GLU A 80 ? GLU A 77 . ? 1_555 ? 19 AC4 5 GLU A 80 ? GLU A 77 . ? 9_765 ? 20 AC4 5 ARG A 84 ? ARG A 81 . ? 1_555 ? 21 AC4 5 HOH K . ? HOH A 325 . ? 9_765 ? 22 AC5 5 ASP A 75 ? ASP A 72 . ? 1_555 ? 23 AC5 5 HIS A 78 ? HIS A 75 . ? 1_555 ? 24 AC5 5 ALA A 79 ? ALA A 76 . ? 1_555 ? 25 AC5 5 SER A 82 ? SER A 79 . ? 1_555 ? 26 AC5 5 HOH K . ? HOH A 346 . ? 1_555 ? 27 AC6 4 ALA A 83 ? ALA A 80 . ? 1_555 ? 28 AC6 4 ARG A 84 ? ARG A 81 . ? 1_555 ? 29 AC6 4 VAL A 85 ? VAL A 82 . ? 1_555 ? 30 AC6 4 SER A 86 ? SER A 83 . ? 1_555 ? 31 AC7 3 GLU A 108 ? GLU A 105 . ? 1_555 ? 32 AC7 3 GLY A 110 ? GLY A 107 . ? 1_555 ? 33 AC7 3 HIS A 120 ? HIS A 117 . ? 1_555 ? 34 AC8 6 ALA A 92 ? ALA A 89 . ? 1_555 ? 35 AC8 6 HIS A 94 ? HIS A 91 . ? 1_555 ? 36 AC8 6 PRO A 95 ? PRO A 92 . ? 1_555 ? 37 AC8 6 ARG A 112 ? ARG A 109 . ? 1_555 ? 38 AC8 6 ASP A 113 ? ASP A 110 . ? 1_555 ? 39 AC8 6 GLY A 116 ? GLY A 113 . ? 1_555 ? 40 AC9 3 THR A 98 ? THR A 95 . ? 1_555 ? 41 AC9 3 ALA A 99 ? ALA A 96 . ? 1_555 ? 42 AC9 3 ARG A 101 ? ARG A 98 . ? 1_555 ? # _atom_sites.entry_id 4IAG _atom_sites.fract_transf_matrix[1][1] 0.025782 _atom_sites.fract_transf_matrix[1][2] 0.014885 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.029770 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003724 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 ? ? ? A . n A 1 3 ALA 3 0 ? ? ? A . n A 1 4 MSE 4 1 ? ? ? A . n A 1 5 ALA 5 2 2 ALA ALA A . n A 1 6 VAL 6 3 3 VAL VAL A . n A 1 7 LEU 7 4 4 LEU LEU A . n A 1 8 LEU 8 5 5 LEU LEU A . n A 1 9 SER 9 6 6 SER SER A . n A 1 10 GLY 10 7 7 GLY GLY A . n A 1 11 VAL 11 8 8 VAL VAL A . n A 1 12 PRO 12 9 9 PRO PRO A . n A 1 13 VAL 13 10 10 VAL VAL A . n A 1 14 LEU 14 11 11 LEU LEU A . n A 1 15 ALA 15 12 12 ALA ALA A . n A 1 16 ALA 16 13 13 ALA ALA A . n A 1 17 LEU 17 14 14 LEU LEU A . n A 1 18 ASP 18 15 15 ASP ASP A . n A 1 19 VAL 19 16 16 VAL VAL A . n A 1 20 SER 20 17 17 SER SER A . n A 1 21 THR 21 18 18 THR THR A . n A 1 22 THR 22 19 19 THR THR A . n A 1 23 GLN 23 20 20 GLN GLN A . n A 1 24 ILY 24 21 21 ILY ILY A . n A 1 25 PHE 25 22 22 PHE PHE A . n A 1 26 TRP 26 23 23 TRP TRP A . n A 1 27 ILE 27 24 24 ILE ILE A . n A 1 28 GLU 28 25 25 GLU GLU A . n A 1 29 VAL 29 26 26 VAL VAL A . n A 1 30 LEU 30 27 27 LEU LEU A . n A 1 31 GLY 31 28 28 GLY GLY A . n A 1 32 PHE 32 29 29 PHE PHE A . n A 1 33 THR 33 30 30 THR THR A . n A 1 34 GLU 34 31 31 GLU GLU A . n A 1 35 GLU 35 32 32 GLU GLU A . n A 1 36 PHE 36 33 33 PHE PHE A . n A 1 37 LEU 37 34 34 LEU LEU A . n A 1 38 THR 38 35 35 THR THR A . n A 1 39 GLU 39 36 36 GLU GLU A . n A 1 40 ASP 40 37 37 ASP ASP A . n A 1 41 PHE 41 38 38 PHE PHE A . n A 1 42 GLY 42 39 39 GLY GLY A . n A 1 43 GLY 43 40 40 GLY GLY A . n A 1 44 VAL 44 41 41 VAL VAL A . n A 1 45 SER 45 42 42 SER SER A . n A 1 46 ARG 46 43 43 ARG ARG A . n A 1 47 ASP 47 44 44 ASP ASP A . n A 1 48 GLY 48 45 45 GLY GLY A . n A 1 49 VAL 49 46 46 VAL VAL A . n A 1 50 GLU 50 47 47 GLU GLU A . n A 1 51 LEU 51 48 48 LEU LEU A . n A 1 52 PHE 52 49 49 PHE PHE A . n A 1 53 ILE 53 50 50 ILE ILE A . n A 1 54 CYS 54 51 51 CYS CYS A . n A 1 55 SER 55 52 52 SER SER A . n A 1 56 VAL 56 53 53 VAL VAL A . n A 1 57 GLU 57 54 54 GLU GLU A . n A 1 58 ASP 58 55 55 ASP ASP A . n A 1 59 GLN 59 56 56 GLN GLN A . n A 1 60 VAL 60 57 57 VAL VAL A . n A 1 61 VAL 61 58 58 VAL VAL A . n A 1 62 PRO 62 59 59 PRO PRO A . n A 1 63 ASP 63 60 60 ASP ASP A . n A 1 64 ASN 64 61 61 ASN ASN A . n A 1 65 THR 65 62 62 THR THR A . n A 1 66 GLN 66 63 63 GLN GLN A . n A 1 67 ALA 67 64 64 ALA ALA A . n A 1 68 TRP 68 65 65 TRP TRP A . n A 1 69 LEU 69 66 66 LEU LEU A . n A 1 70 ARG 70 67 67 ARG ARG A . n A 1 71 VAL 71 68 68 VAL VAL A . n A 1 72 ARG 72 69 69 ARG ARG A . n A 1 73 ASP 73 70 70 ASP ASP A . n A 1 74 ILE 74 71 71 ILE ILE A . n A 1 75 ASP 75 72 72 ASP ASP A . n A 1 76 ALA 76 73 73 ALA ALA A . n A 1 77 LEU 77 74 74 LEU LEU A . n A 1 78 HIS 78 75 75 HIS HIS A . n A 1 79 ALA 79 76 76 ALA ALA A . n A 1 80 GLU 80 77 77 GLU GLU A . n A 1 81 TRP 81 78 78 TRP TRP A . n A 1 82 SER 82 79 79 SER SER A . n A 1 83 ALA 83 80 80 ALA ALA A . n A 1 84 ARG 84 81 81 ARG ARG A . n A 1 85 VAL 85 82 82 VAL VAL A . n A 1 86 SER 86 83 83 SER SER A . n A 1 87 SER 87 84 84 SER SER A . n A 1 88 ASP 88 85 85 ASP ASP A . n A 1 89 TYR 89 86 86 TYR TYR A . n A 1 90 ALA 90 87 87 ALA ALA A . n A 1 91 ASP 91 88 88 ASP ASP A . n A 1 92 ALA 92 89 89 ALA ALA A . n A 1 93 SER 93 90 90 SER SER A . n A 1 94 HIS 94 91 91 HIS HIS A . n A 1 95 PRO 95 92 92 PRO PRO A . n A 1 96 ALA 96 93 93 ALA ALA A . n A 1 97 MSE 97 94 94 MSE MSE A . n A 1 98 THR 98 95 95 THR THR A . n A 1 99 ALA 99 96 96 ALA ALA A . n A 1 100 ILE 100 97 97 ILE ILE A . n A 1 101 ARG 101 98 98 ARG ARG A . n A 1 102 GLU 102 99 99 GLU GLU A . n A 1 103 VAL 103 100 100 VAL VAL A . n A 1 104 PRO 104 101 101 PRO PRO A . n A 1 105 TRP 105 102 102 TRP TRP A . n A 1 106 GLY 106 103 103 GLY GLY A . n A 1 107 ARG 107 104 104 ARG ARG A . n A 1 108 GLU 108 105 105 GLU GLU A . n A 1 109 PHE 109 106 106 PHE PHE A . n A 1 110 GLY 110 107 107 GLY GLY A . n A 1 111 LEU 111 108 108 LEU LEU A . n A 1 112 ARG 112 109 109 ARG ARG A . n A 1 113 ASP 113 110 110 ASP ASP A . n A 1 114 PRO 114 111 111 PRO PRO A . n A 1 115 ALA 115 112 112 ALA ALA A . n A 1 116 GLY 116 113 113 GLY GLY A . n A 1 117 ASN 117 114 114 ASN ASN A . n A 1 118 LEU 118 115 115 LEU LEU A . n A 1 119 VAL 119 116 116 VAL VAL A . n A 1 120 HIS 120 117 117 HIS HIS A . n A 1 121 PHE 121 118 118 PHE PHE A . n A 1 122 SER 122 119 119 SER SER A . n A 1 123 GLU 123 120 120 GLU GLU A . n A 1 124 LEU 124 121 121 LEU LEU A . n A 1 125 SER 125 122 122 SER SER A . n A 1 126 GLU 126 123 ? ? ? A . n A 1 127 ALA 127 124 ? ? ? A . n A 1 128 ALA 128 125 ? ? ? A . n A 1 129 GLU 129 126 ? ? ? A . n A 1 130 THR 130 127 ? ? ? A . n A 1 131 THR 131 128 ? ? ? A . n A 1 132 ARG 132 129 ? ? ? A . n A 1 133 THR 133 130 ? ? ? A . n A 1 134 VAL 134 131 ? ? ? A . n A 1 135 ARG 135 132 ? ? ? A . n # loop_ _pdbx_SG_project.project_name _pdbx_SG_project.full_name_of_center _pdbx_SG_project.initial_of_center _pdbx_SG_project.id PSI:Biology 'Midwest Center for Structural Genomics' MCSG 1 PSI:Biology 'Enzyme Discovery for Natural Product Biosynthesis' NatPro 2 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 201 1 EDO EDO A . C 2 EDO 1 202 1 EDO EDO A . D 3 GOL 1 203 1 GOL GOL A . E 2 EDO 1 204 1 EDO EDO A . F 2 EDO 1 205 1 EDO EDO A . G 2 EDO 1 206 1 EDO EDO A . H 2 EDO 1 207 1 EDO EDO A . I 2 EDO 1 208 1 EDO EDO A . J 2 EDO 1 209 1 EDO EDO A . K 4 HOH 1 301 1 HOH HOH A . K 4 HOH 2 302 2 HOH HOH A . K 4 HOH 3 303 3 HOH HOH A . K 4 HOH 4 304 4 HOH HOH A . K 4 HOH 5 305 5 HOH HOH A . K 4 HOH 6 306 6 HOH HOH A . K 4 HOH 7 307 7 HOH HOH A . K 4 HOH 8 308 8 HOH HOH A . K 4 HOH 9 309 9 HOH HOH A . K 4 HOH 10 310 10 HOH HOH A . K 4 HOH 11 311 11 HOH HOH A . K 4 HOH 12 312 12 HOH HOH A . K 4 HOH 13 313 13 HOH HOH A . K 4 HOH 14 314 14 HOH HOH A . K 4 HOH 15 315 15 HOH HOH A . K 4 HOH 16 316 16 HOH HOH A . K 4 HOH 17 317 17 HOH HOH A . K 4 HOH 18 318 18 HOH HOH A . K 4 HOH 19 319 19 HOH HOH A . K 4 HOH 20 320 20 HOH HOH A . K 4 HOH 21 321 21 HOH HOH A . K 4 HOH 22 322 22 HOH HOH A . K 4 HOH 23 323 23 HOH HOH A . K 4 HOH 24 324 24 HOH HOH A . K 4 HOH 25 325 25 HOH HOH A . K 4 HOH 26 326 26 HOH HOH A . K 4 HOH 27 327 27 HOH HOH A . K 4 HOH 28 328 28 HOH HOH A . K 4 HOH 29 329 29 HOH HOH A . K 4 HOH 30 330 30 HOH HOH A . K 4 HOH 31 331 31 HOH HOH A . K 4 HOH 32 332 32 HOH HOH A . K 4 HOH 33 333 33 HOH HOH A . K 4 HOH 34 334 34 HOH HOH A . K 4 HOH 35 335 35 HOH HOH A . K 4 HOH 36 336 36 HOH HOH A . K 4 HOH 37 337 37 HOH HOH A . K 4 HOH 38 338 38 HOH HOH A . K 4 HOH 39 339 40 HOH HOH A . K 4 HOH 40 340 41 HOH HOH A . K 4 HOH 41 341 42 HOH HOH A . K 4 HOH 42 342 43 HOH HOH A . K 4 HOH 43 343 44 HOH HOH A . K 4 HOH 44 344 45 HOH HOH A . K 4 HOH 45 345 46 HOH HOH A . K 4 HOH 46 346 47 HOH HOH A . K 4 HOH 47 347 48 HOH HOH A . K 4 HOH 48 348 49 HOH HOH A . K 4 HOH 49 349 50 HOH HOH A . K 4 HOH 50 350 51 HOH HOH A . K 4 HOH 51 351 52 HOH HOH A . K 4 HOH 52 352 53 HOH HOH A . K 4 HOH 53 353 54 HOH HOH A . K 4 HOH 54 354 55 HOH HOH A . K 4 HOH 55 355 56 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ILY 24 A ILY 21 ? LYS N~6~-PROPAN-2-YL-L-LYSINE 2 A MSE 97 A MSE 94 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5910 ? 1 MORE 9 ? 1 'SSA (A^2)' 11590 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5000000000 -0.8660254038 0.0000000000 19.3935000000 -0.8660254038 -0.5000000000 0.0000000000 33.5905273366 0.0000000000 0.0000000000 -1.0000000000 44.7540000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-02-20 2 'Structure model' 1 1 2013-12-25 3 'Structure model' 1 2 2015-11-11 4 'Structure model' 1 3 2015-12-02 5 'Structure model' 1 4 2017-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 5 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.900 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 10484 _diffrn_reflns.pdbx_Rmerge_I_obs 0.068 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.23 _diffrn_reflns.av_sigmaI_over_netI 33.01 _diffrn_reflns.pdbx_redundancy 9.70 _diffrn_reflns.pdbx_percent_possible_obs 98.50 _diffrn_reflns.number 101644 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 5.16 50.00 ? ? 0.057 ? 2.184 8.90 97.10 1 4.09 5.16 ? ? 0.047 ? 1.615 10.60 99.70 1 3.58 4.09 ? ? 0.050 ? 1.524 11.10 100.00 1 3.25 3.58 ? ? 0.055 ? 1.540 12.00 100.00 1 3.02 3.25 ? ? 0.067 ? 1.420 11.80 100.00 1 2.84 3.02 ? ? 0.074 ? 1.147 12.40 100.00 1 2.70 2.84 ? ? 0.090 ? 1.202 12.20 100.00 1 2.58 2.70 ? ? 0.105 ? 1.101 12.40 100.00 1 2.48 2.58 ? ? 0.118 ? 1.153 12.40 100.00 1 2.39 2.48 ? ? 0.117 ? 1.027 12.40 100.00 1 2.32 2.39 ? ? 0.129 ? 0.988 11.70 100.00 1 2.25 2.32 ? ? 0.178 ? 1.204 10.60 100.00 1 2.19 2.25 ? ? 0.186 ? 0.980 9.80 100.00 1 2.14 2.19 ? ? 0.223 ? 0.898 9.40 100.00 1 2.09 2.14 ? ? 0.277 ? 0.847 8.20 100.00 1 2.05 2.09 ? ? 0.315 ? 0.931 6.60 99.80 1 2.01 2.05 ? ? 0.348 ? 0.770 6.00 97.90 1 1.97 2.01 ? ? 0.372 ? 0.867 5.00 95.40 1 1.93 1.97 ? ? 0.397 ? 0.846 4.30 93.20 1 1.90 1.93 ? ? 0.434 ? 0.910 4.00 87.50 # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 46.1737 _pdbx_refine_tls.origin_y -2.9324 _pdbx_refine_tls.origin_z 32.3225 _pdbx_refine_tls.T[1][1] 0.1502 _pdbx_refine_tls.T[2][2] 0.1598 _pdbx_refine_tls.T[3][3] 0.0620 _pdbx_refine_tls.T[1][2] -0.1359 _pdbx_refine_tls.T[1][3] 0.0278 _pdbx_refine_tls.T[2][3] 0.0037 _pdbx_refine_tls.L[1][1] 1.9312 _pdbx_refine_tls.L[2][2] 1.7258 _pdbx_refine_tls.L[3][3] 1.4975 _pdbx_refine_tls.L[1][2] 0.6523 _pdbx_refine_tls.L[1][3] 0.1694 _pdbx_refine_tls.L[2][3] 0.2261 _pdbx_refine_tls.S[1][1] 0.2655 _pdbx_refine_tls.S[2][2] -0.2601 _pdbx_refine_tls.S[3][3] -0.0054 _pdbx_refine_tls.S[1][2] -0.3032 _pdbx_refine_tls.S[1][3] 0.0669 _pdbx_refine_tls.S[2][3] 0.0033 _pdbx_refine_tls.S[2][1] 0.1092 _pdbx_refine_tls.S[3][1] 0.0560 _pdbx_refine_tls.S[3][2] 0.0276 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 2 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 122 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _pdbx_phasing_MAD_set.id 1 _pdbx_phasing_MAD_set.d_res_high 2.00 _pdbx_phasing_MAD_set.d_res_low 44.75 _pdbx_phasing_MAD_set.reflns_acentric 6258 _pdbx_phasing_MAD_set.loc_acentric 0.000 _pdbx_phasing_MAD_set.power_acentric 0.000 _pdbx_phasing_MAD_set.R_cullis_acentric 2.070 _pdbx_phasing_MAD_set.reflns_centric 2742 _pdbx_phasing_MAD_set.loc_centric 0.000 _pdbx_phasing_MAD_set.power_centric 0.000 _pdbx_phasing_MAD_set.R_cullis_centric 1.000 # loop_ _pdbx_phasing_MAD_set_shell.id _pdbx_phasing_MAD_set_shell.d_res_high _pdbx_phasing_MAD_set_shell.d_res_low _pdbx_phasing_MAD_set_shell.reflns_acentric _pdbx_phasing_MAD_set_shell.loc_acentric _pdbx_phasing_MAD_set_shell.power_acentric _pdbx_phasing_MAD_set_shell.R_cullis_acentric _pdbx_phasing_MAD_set_shell.reflns_centric _pdbx_phasing_MAD_set_shell.loc_centric _pdbx_phasing_MAD_set_shell.power_centric _pdbx_phasing_MAD_set_shell.R_cullis_centric 1 12.19 44.75 6 0.300 0.000 3.950 53 0.100 0.000 1.000 1 7.05 12.19 74 0.100 0.000 2.230 134 0.100 0.000 1.000 1 4.96 7.05 213 0.100 0.000 2.460 217 0.000 0.000 1.000 1 3.83 4.96 432 0.100 0.000 1.300 308 0.100 0.000 1.000 1 3.12 3.83 746 0.100 0.000 1.490 391 0.000 0.000 1.000 1 2.63 3.12 1113 0.100 0.000 2.680 470 0.000 0.000 1.000 1 2.27 2.63 1558 0.000 0.000 2.780 548 0.000 0.000 1.000 1 2.00 2.27 2116 0.000 0.000 2.380 621 0.000 0.000 1.000 # _pdbx_phasing_MAD_set_site.id 1 _pdbx_phasing_MAD_set_site.atom_type_symbol Se _pdbx_phasing_MAD_set_site.fract_x 0.914 _pdbx_phasing_MAD_set_site.fract_y 0.714 _pdbx_phasing_MAD_set_site.fract_z 0.017 _pdbx_phasing_MAD_set_site.b_iso 53.9197 _pdbx_phasing_MAD_set_site.occupancy_iso 0.000 _pdbx_phasing_MAD_set_site.occupancy 4.230 # loop_ _pdbx_phasing_MAD_shell.d_res_high _pdbx_phasing_MAD_shell.d_res_low _pdbx_phasing_MAD_shell.reflns _pdbx_phasing_MAD_shell.fom _pdbx_phasing_MAD_shell.reflns_centric _pdbx_phasing_MAD_shell.fom_centric _pdbx_phasing_MAD_shell.reflns_acentric _pdbx_phasing_MAD_shell.fom_acentric 12.19 44.75 59 0.041 53 0.000 6 0.406 7.05 12.19 208 0.165 134 0.000 74 0.463 4.96 7.05 430 0.261 217 0.000 213 0.527 3.83 4.96 740 0.250 308 0.000 432 0.428 3.12 3.83 1137 0.275 391 0.000 746 0.418 2.63 3.12 1583 0.250 470 0.000 1113 0.355 2.27 2.63 2106 0.156 548 0.000 1558 0.211 2.00 2.27 2737 0.065 621 0.000 2116 0.084 # _pdbx_phasing_dm.entry_id 4IAG _pdbx_phasing_dm.method 'Solvent flattening and Histogram matching' _pdbx_phasing_dm.reflns 10313 # loop_ _pdbx_phasing_dm_shell.d_res_high _pdbx_phasing_dm_shell.d_res_low _pdbx_phasing_dm_shell.delta_phi_final _pdbx_phasing_dm_shell.delta_phi_initial _pdbx_phasing_dm_shell.fom_acentric _pdbx_phasing_dm_shell.fom_centric _pdbx_phasing_dm_shell.fom _pdbx_phasing_dm_shell.reflns_acentric _pdbx_phasing_dm_shell.reflns_centric _pdbx_phasing_dm_shell.reflns 5.580 100.000 73.900 ? ? ? 0.488 ? ? 506 4.350 5.580 70.600 ? ? ? 0.807 ? ? 506 3.760 4.350 69.500 ? ? ? 0.829 ? ? 506 3.390 3.760 70.400 ? ? ? 0.825 ? ? 503 3.140 3.390 72.000 ? ? ? 0.803 ? ? 502 2.940 3.140 69.800 ? ? ? 0.777 ? ? 507 2.780 2.940 70.500 ? ? ? 0.767 ? ? 505 2.650 2.780 72.200 ? ? ? 0.751 ? ? 509 2.540 2.650 76.300 ? ? ? 0.735 ? ? 501 2.450 2.540 81.300 ? ? ? 0.745 ? ? 506 2.370 2.450 79.200 ? ? ? 0.685 ? ? 511 2.300 2.370 81.200 ? ? ? 0.719 ? ? 502 2.230 2.300 84.900 ? ? ? 0.747 ? ? 507 2.180 2.230 80.800 ? ? ? 0.754 ? ? 512 2.120 2.180 91.600 ? ? ? 0.777 ? ? 522 2.080 2.120 82.500 ? ? ? 0.698 ? ? 506 2.030 2.080 85.200 ? ? ? 0.710 ? ? 515 1.990 2.030 87.200 ? ? ? 0.684 ? ? 501 1.950 1.990 91.500 ? ? ? 0.633 ? ? 507 1.900 1.950 88.700 ? ? ? 0.565 ? ? 679 # _phasing.method SAD # _phasing_MAD.entry_id 4IAG _phasing_MAD.pdbx_d_res_high 2.00 _phasing_MAD.pdbx_d_res_low 44.75 _phasing_MAD.pdbx_reflns 9000 _phasing_MAD.pdbx_fom 0.172 _phasing_MAD.pdbx_reflns_centric 2742 _phasing_MAD.pdbx_fom_centric 0.000 _phasing_MAD.pdbx_reflns_acentric 6258 _phasing_MAD.pdbx_fom_acentric 0.248 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 MLPHARE . ? other 'Eleanor J. Dodson' ccp4@ccp4.ac.uk phasing http://www.ccp4.ac.uk/dist/html/mlphare.html Fortran_77 ? 4 DM 6.1 ? program 'Kevin Cowtan' kowtan@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/dm.html Fortran_77 ? 5 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 6 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 7 SBC-Collect . ? ? ? ? 'data collection' ? ? ? 8 HKL-3000 . ? ? ? ? 'data reduction' ? ? ? 9 HKL-3000 . ? ? ? ? 'data scaling' ? ? ? 10 HKL-3000 SHELXD ? ? ? ? phasing ? ? ? 11 SHELXE . ? ? ? ? 'model building' ? ? ? 12 SOLVE . ? ? ? ? phasing ? ? ? 13 RESOLVE . ? ? ? ? phasing ? ? ? 14 ARP/wARP . ? ? ? ? 'model building' ? ? ? 15 CCP4 . ? ? ? ? phasing ? ? ? 16 O . ? ? ? ? 'model building' ? ? ? 17 Coot . ? ? ? ? 'model building' ? ? ? # _pdbx_entry_details.entry_id 4IAG _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details 'THE LYSINE RESIDUES IN THIS PROTEIN WERE SUBJECT TO REDUCTIVE ISOPROPYLATION' _pdbx_entry_details.source_details ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 43 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 43 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 43 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.33 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 3.03 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 70 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 67.15 _pdbx_validate_torsion.psi 60.86 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A ASN -1 ? A ASN 2 3 1 Y 1 A ALA 0 ? A ALA 3 4 1 Y 1 A MSE 1 ? A MSE 4 5 1 Y 1 A GLU 123 ? A GLU 126 6 1 Y 1 A ALA 124 ? A ALA 127 7 1 Y 1 A ALA 125 ? A ALA 128 8 1 Y 1 A GLU 126 ? A GLU 129 9 1 Y 1 A THR 127 ? A THR 130 10 1 Y 1 A THR 128 ? A THR 131 11 1 Y 1 A ARG 129 ? A ARG 132 12 1 Y 1 A THR 130 ? A THR 133 13 1 Y 1 A VAL 131 ? A VAL 134 14 1 Y 1 A ARG 132 ? A ARG 135 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 GLYCEROL GOL 4 water HOH #