HEADER TRANSFERASE 11-DEC-12 4ID0 TITLE CRYSTAL STRUCTURE OF A GLUTATHIONE TRANSFERASE FAMILY MEMBER FROM TITLE 2 PSEUDOMONAS FLUORESCENS PF-5, TARGET EFI-900011, WITH BOUND TITLE 3 GLUTATHIONE SULFINIC ACID (GSO2H) AND ACETATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE S-TRANSFERASE-LIKE PROTEIN YIBF; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS FLUORESCENS; SOURCE 3 ORGANISM_TAXID: 1218948; SOURCE 4 STRAIN: PF-5; SOURCE 5 GENE: YIBF, PFL_5710; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS GST, GLUTATHIONE S-TRANSFERASE, ENZYME FUNCTION INITIATIVE, EFI, KEYWDS 2 STRUCTURAL GENOMICS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.W.VETTING,J.M.SAUDER,L.L.MORISCO,S.R.WASSERMAN,S.SOJITRA,H.J.IMKER, AUTHOR 2 S.K.BURLEY,J.A.GERLT,S.C.ALMO,ENZYME FUNCTION INITIATIVE (EFI) REVDAT 6 06-DEC-23 4ID0 1 REMARK REVDAT 5 20-SEP-23 4ID0 1 REMARK REVDAT 4 10-FEB-21 4ID0 1 AUTHOR JRNL REMARK SEQADV REVDAT 4 2 1 LINK REVDAT 3 21-NOV-18 4ID0 1 AUTHOR REVDAT 2 06-MAR-13 4ID0 1 JRNL TITLE REVDAT 1 26-DEC-12 4ID0 0 JRNL AUTH M.W.VETTING,J.M.SAUDER,L.L.MORISCO,S.R.WASSERMAN,S.SOJITRA, JRNL AUTH 2 H.J.IMKER,S.K.BURLEY,J.A.GERLT,S.C.ALMO, JRNL AUTH 3 ENZYME FUNCTION INITIATIVE (EFI) JRNL TITL CRYSTAL STRUCTURE OF A GLUTATHIONE TRANSFERASE FAMILY MEMBER JRNL TITL 2 FROM PSEUDOMONAS FLUORESCENS PF-5, TARGET EFI-900011, WITH JRNL TITL 3 BOUND GLUTATHIONE SULFINIC ACID (GSO2H) AND ACETATE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.02 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.3 REMARK 3 NUMBER OF REFLECTIONS : 142239 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.172 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 7132 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 22.0196 - 3.4138 0.99 5205 254 0.1627 0.1840 REMARK 3 2 3.4138 - 2.7113 1.00 5085 254 0.1650 0.1698 REMARK 3 3 2.7113 - 2.3690 1.00 5030 255 0.1702 0.1868 REMARK 3 4 2.3690 - 2.1526 1.00 4984 278 0.1585 0.1697 REMARK 3 5 2.1526 - 1.9984 1.00 4941 281 0.1497 0.1640 REMARK 3 6 1.9984 - 1.8807 1.00 4964 255 0.1545 0.1527 REMARK 3 7 1.8807 - 1.7865 1.00 4958 242 0.1495 0.1639 REMARK 3 8 1.7865 - 1.7088 1.00 4914 269 0.1470 0.1532 REMARK 3 9 1.7088 - 1.6430 1.00 4950 275 0.1409 0.1758 REMARK 3 10 1.6430 - 1.5863 0.99 4918 227 0.1377 0.1423 REMARK 3 11 1.5863 - 1.5368 0.99 4935 259 0.1334 0.1531 REMARK 3 12 1.5368 - 1.4928 0.99 4867 257 0.1362 0.1494 REMARK 3 13 1.4928 - 1.4535 0.99 4840 271 0.1414 0.1485 REMARK 3 14 1.4535 - 1.4181 0.99 4828 301 0.1470 0.1645 REMARK 3 15 1.4181 - 1.3859 0.99 4875 247 0.1526 0.1771 REMARK 3 16 1.3859 - 1.3564 0.99 4822 257 0.1509 0.1599 REMARK 3 17 1.3564 - 1.3292 0.99 4862 245 0.1508 0.1702 REMARK 3 18 1.3292 - 1.3042 0.98 4793 252 0.1552 0.1921 REMARK 3 19 1.3042 - 1.2809 0.98 4845 252 0.1577 0.1612 REMARK 3 20 1.2809 - 1.2592 0.98 4794 276 0.1685 0.1757 REMARK 3 21 1.2592 - 1.2388 0.98 4764 260 0.1718 0.1944 REMARK 3 22 1.2388 - 1.2198 0.98 4741 270 0.1728 0.1891 REMARK 3 23 1.2198 - 1.2019 0.95 4646 256 0.1831 0.1999 REMARK 3 24 1.2019 - 1.1849 0.88 4309 213 0.1937 0.2015 REMARK 3 25 1.1849 - 1.1689 0.79 3821 213 0.1843 0.1968 REMARK 3 26 1.1689 - 1.1537 0.72 3538 185 0.1844 0.2089 REMARK 3 27 1.1537 - 1.1393 0.65 3189 145 0.1845 0.1689 REMARK 3 28 1.1393 - 1.1256 0.60 2916 140 0.1849 0.1845 REMARK 3 29 1.1256 - 1.1125 0.52 2572 128 0.2018 0.1975 REMARK 3 30 1.1125 - 1.1000 0.45 2201 115 0.2177 0.2354 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.080 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 7.88 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 3507 REMARK 3 ANGLE : 1.656 4798 REMARK 3 CHIRALITY : 0.099 520 REMARK 3 PLANARITY : 0.010 644 REMARK 3 DIHEDRAL : 13.648 1307 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.8239 -0.5978 -6.5052 REMARK 3 T TENSOR REMARK 3 T11: 0.0616 T22: 0.0653 REMARK 3 T33: 0.0678 T12: -0.0014 REMARK 3 T13: 0.0053 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 0.5390 L22: 0.9346 REMARK 3 L33: 0.7980 L12: 0.0688 REMARK 3 L13: 0.0830 L23: 0.4382 REMARK 3 S TENSOR REMARK 3 S11: -0.0095 S12: -0.0525 S13: 0.0558 REMARK 3 S21: 0.0592 S22: -0.0161 S23: 0.1536 REMARK 3 S31: -0.0151 S32: -0.0890 S33: 0.0249 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 53 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.6493 -8.2631 -1.4698 REMARK 3 T TENSOR REMARK 3 T11: 0.0396 T22: 0.0517 REMARK 3 T33: 0.0475 T12: -0.0118 REMARK 3 T13: 0.0037 T23: 0.0146 REMARK 3 L TENSOR REMARK 3 L11: 1.0223 L22: 1.6569 REMARK 3 L33: 1.4901 L12: -0.2091 REMARK 3 L13: -0.0097 L23: 0.3990 REMARK 3 S TENSOR REMARK 3 S11: -0.0086 S12: -0.1038 S13: -0.1329 REMARK 3 S21: 0.1440 S22: 0.0003 S23: 0.1301 REMARK 3 S31: 0.0889 S32: -0.1135 S33: -0.0007 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 78 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.7360 -19.3502 -9.1390 REMARK 3 T TENSOR REMARK 3 T11: 0.1381 T22: 0.0642 REMARK 3 T33: 0.1809 T12: -0.0088 REMARK 3 T13: 0.0106 T23: 0.0197 REMARK 3 L TENSOR REMARK 3 L11: 3.2540 L22: 0.2229 REMARK 3 L33: 1.5495 L12: 0.5311 REMARK 3 L13: -0.0358 L23: 0.4449 REMARK 3 S TENSOR REMARK 3 S11: 0.0624 S12: -0.0790 S13: -0.6962 REMARK 3 S21: 0.2717 S22: -0.0321 S23: -0.1645 REMARK 3 S31: 0.4125 S32: -0.0106 S33: -0.0917 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 88 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.7794 1.1472 -8.4241 REMARK 3 T TENSOR REMARK 3 T11: 0.0447 T22: 0.0539 REMARK 3 T33: 0.0601 T12: -0.0080 REMARK 3 T13: -0.0043 T23: 0.0022 REMARK 3 L TENSOR REMARK 3 L11: 0.6251 L22: 3.3100 REMARK 3 L33: 0.5126 L12: -0.7308 REMARK 3 L13: 0.1958 L23: -0.0879 REMARK 3 S TENSOR REMARK 3 S11: 0.0430 S12: 0.0341 S13: -0.1115 REMARK 3 S21: 0.0153 S22: -0.0274 S23: 0.2754 REMARK 3 S31: 0.0325 S32: -0.0206 S33: -0.0179 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 118 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.2228 6.4059 -14.9834 REMARK 3 T TENSOR REMARK 3 T11: 0.0540 T22: 0.0521 REMARK 3 T33: 0.0407 T12: -0.0076 REMARK 3 T13: 0.0089 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 0.4242 L22: 0.8614 REMARK 3 L33: 0.3914 L12: 0.1012 REMARK 3 L13: 0.0973 L23: 0.4347 REMARK 3 S TENSOR REMARK 3 S11: -0.0111 S12: 0.0832 S13: 0.0167 REMARK 3 S21: -0.0734 S22: 0.0592 S23: -0.0815 REMARK 3 S31: -0.0520 S32: 0.0397 S33: -0.0449 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 182 THROUGH 203 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.1649 -3.0576 -23.8242 REMARK 3 T TENSOR REMARK 3 T11: 0.0695 T22: 0.0627 REMARK 3 T33: 0.0518 T12: -0.0101 REMARK 3 T13: 0.0021 T23: -0.0086 REMARK 3 L TENSOR REMARK 3 L11: 1.9382 L22: 0.3890 REMARK 3 L33: 0.8484 L12: 0.2481 REMARK 3 L13: -0.4892 L23: 0.0982 REMARK 3 S TENSOR REMARK 3 S11: 0.0114 S12: -0.0763 S13: 0.0415 REMARK 3 S21: -0.0566 S22: 0.0288 S23: 0.0013 REMARK 3 S31: -0.0461 S32: 0.0405 S33: -0.0463 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 0 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.8909 -3.8063 3.6434 REMARK 3 T TENSOR REMARK 3 T11: 0.0350 T22: 0.0480 REMARK 3 T33: 0.0539 T12: 0.0113 REMARK 3 T13: -0.0045 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 0.7455 L22: 0.8475 REMARK 3 L33: 1.2681 L12: 0.1264 REMARK 3 L13: -0.0320 L23: -0.5196 REMARK 3 S TENSOR REMARK 3 S11: -0.0154 S12: -0.0406 S13: -0.0301 REMARK 3 S21: 0.0121 S22: -0.0050 S23: -0.0690 REMARK 3 S31: 0.0334 S32: 0.0747 S33: 0.0155 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 77 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.5502 -3.7323 6.6292 REMARK 3 T TENSOR REMARK 3 T11: 0.0532 T22: 0.0616 REMARK 3 T33: 0.0731 T12: 0.0067 REMARK 3 T13: -0.0038 T23: 0.0191 REMARK 3 L TENSOR REMARK 3 L11: 0.5200 L22: 0.2188 REMARK 3 L33: 0.4907 L12: -0.3279 REMARK 3 L13: 0.0953 L23: -0.1478 REMARK 3 S TENSOR REMARK 3 S11: 0.0076 S12: -0.1131 S13: -0.1555 REMARK 3 S21: -0.0473 S22: -0.0161 S23: -0.0797 REMARK 3 S31: 0.0572 S32: -0.0186 S33: -0.0213 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 118 THROUGH 147 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.0980 14.1368 7.6397 REMARK 3 T TENSOR REMARK 3 T11: 0.0604 T22: 0.0680 REMARK 3 T33: 0.0429 T12: 0.0134 REMARK 3 T13: -0.0053 T23: -0.0119 REMARK 3 L TENSOR REMARK 3 L11: 1.5689 L22: 2.1721 REMARK 3 L33: 1.6940 L12: 0.9258 REMARK 3 L13: -1.0372 L23: -1.2929 REMARK 3 S TENSOR REMARK 3 S11: 0.0500 S12: -0.0702 S13: 0.1538 REMARK 3 S21: 0.1275 S22: 0.0758 S23: 0.1637 REMARK 3 S31: -0.1115 S32: -0.0810 S33: -0.1120 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 148 THROUGH 203 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.1550 1.3171 18.9943 REMARK 3 T TENSOR REMARK 3 T11: 0.0632 T22: 0.1054 REMARK 3 T33: 0.0344 T12: 0.0123 REMARK 3 T13: -0.0013 T23: 0.0090 REMARK 3 L TENSOR REMARK 3 L11: 0.7977 L22: 0.9696 REMARK 3 L33: 1.2382 L12: -0.0727 REMARK 3 L13: -0.1455 L23: 0.0985 REMARK 3 S TENSOR REMARK 3 S11: 0.0154 S12: -0.1551 S13: -0.0238 REMARK 3 S21: 0.1532 S22: 0.0245 S23: 0.0316 REMARK 3 S31: 0.0210 S32: -0.0495 S33: -0.0308 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ID0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-DEC-12. REMARK 100 THE DEPOSITION ID IS D_1000076597. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 1904924 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.100 REMARK 200 RESOLUTION RANGE LOW (A) : 22.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.5 REMARK 200 DATA REDUNDANCY : 13.40 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 57.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.00 REMARK 200 R MERGE FOR SHELL (I) : 0.05230 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 3TOU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (10 MM HEPES PH 7.5, 100 MM REMARK 280 NACL + 5 MM REDUCED GLUTATHIONE); RESERVOIR (200 MM AMACETATE, REMARK 280 100 MM NA3CITRATE PH 5.6, 25% PEG4000, 15% GLYCEROL); REMARK 280 CRYOPROTECTION (90% RESERVOIR, 10% GLYCEROL), VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.27100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.09100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.87050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.09100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.27100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.87050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -1 REMARK 465 VAL A 204 REMARK 465 GLU A 205 REMARK 465 GLY A 206 REMARK 465 HIS A 207 REMARK 465 HIS A 208 REMARK 465 HIS A 209 REMARK 465 HIS A 210 REMARK 465 HIS A 211 REMARK 465 HIS A 212 REMARK 465 MSE B -1 REMARK 465 VAL B 204 REMARK 465 GLU B 205 REMARK 465 GLY B 206 REMARK 465 HIS B 207 REMARK 465 HIS B 208 REMARK 465 HIS B 209 REMARK 465 HIS B 210 REMARK 465 HIS B 211 REMARK 465 HIS B 212 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 176 O HOH B 686 1.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 669 O HOH B 649 2554 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 132 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG A 201 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG B 118 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 38 -87.44 -123.71 REMARK 500 ASN A 81 100.30 -51.68 REMARK 500 ASN A 81 100.30 1.14 REMARK 500 ASP A 155 -159.82 -117.67 REMARK 500 ALA B 148 -41.73 -154.55 REMARK 500 ASP B 155 -161.00 -118.84 REMARK 500 GLU B 176 57.08 37.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSF B 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-900011 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: 4IBP RELATED DB: PDB DBREF 4ID0 A 2 204 UNP Q4K4R5 Q4K4R5_PSEF5 7 209 DBREF 4ID0 B 2 204 UNP Q4K4R5 Q4K4R5_PSEF5 7 209 SEQADV 4ID0 MSE A -1 UNP Q4K4R5 EXPRESSION TAG SEQADV 4ID0 SER A 0 UNP Q4K4R5 EXPRESSION TAG SEQADV 4ID0 LEU A 1 UNP Q4K4R5 EXPRESSION TAG SEQADV 4ID0 GLU A 205 UNP Q4K4R5 EXPRESSION TAG SEQADV 4ID0 GLY A 206 UNP Q4K4R5 EXPRESSION TAG SEQADV 4ID0 HIS A 207 UNP Q4K4R5 EXPRESSION TAG SEQADV 4ID0 HIS A 208 UNP Q4K4R5 EXPRESSION TAG SEQADV 4ID0 HIS A 209 UNP Q4K4R5 EXPRESSION TAG SEQADV 4ID0 HIS A 210 UNP Q4K4R5 EXPRESSION TAG SEQADV 4ID0 HIS A 211 UNP Q4K4R5 EXPRESSION TAG SEQADV 4ID0 HIS A 212 UNP Q4K4R5 EXPRESSION TAG SEQADV 4ID0 MSE B -1 UNP Q4K4R5 EXPRESSION TAG SEQADV 4ID0 SER B 0 UNP Q4K4R5 EXPRESSION TAG SEQADV 4ID0 LEU B 1 UNP Q4K4R5 EXPRESSION TAG SEQADV 4ID0 GLU B 205 UNP Q4K4R5 EXPRESSION TAG SEQADV 4ID0 GLY B 206 UNP Q4K4R5 EXPRESSION TAG SEQADV 4ID0 HIS B 207 UNP Q4K4R5 EXPRESSION TAG SEQADV 4ID0 HIS B 208 UNP Q4K4R5 EXPRESSION TAG SEQADV 4ID0 HIS B 209 UNP Q4K4R5 EXPRESSION TAG SEQADV 4ID0 HIS B 210 UNP Q4K4R5 EXPRESSION TAG SEQADV 4ID0 HIS B 211 UNP Q4K4R5 EXPRESSION TAG SEQADV 4ID0 HIS B 212 UNP Q4K4R5 EXPRESSION TAG SEQRES 1 A 214 MSE SER LEU THR LEU PHE HIS ASN PRO ALA SER PRO TYR SEQRES 2 A 214 VAL ARG LYS VAL MSE VAL LEU LEU HIS GLU THR GLY GLN SEQRES 3 A 214 LEU ASN ARG VAL ALA LEU GLN ALA SER GLN LEU SER PRO SEQRES 4 A 214 VAL ALA PRO ASP ALA ALA LEU ASN GLN ASP ASN PRO LEU SEQRES 5 A 214 GLY LYS ILE PRO ALA LEU ARG LEU ASP ASN GLY GLN VAL SEQRES 6 A 214 LEU TYR ASP SER ARG VAL ILE LEU ASP TYR LEU ASP GLN SEQRES 7 A 214 GLN HIS VAL GLY ASN PRO LEU ILE PRO ARG ASP GLY SER SEQRES 8 A 214 ALA ARG TRP ARG ARG LEU THR LEU ALA ALA LEU ALA ASP SEQRES 9 A 214 GLY ILE MSE ASP ALA SER VAL LEU VAL ARG TYR GLU LEU SEQRES 10 A 214 ALA LEU ARG ALA PRO GLU LYS HIS TRP GLU GLN TRP LEU SEQRES 11 A 214 ASP GLY GLN ARG ASP LYS ILE ARG ARG ALA LEU ALA VAL SEQRES 12 A 214 LEU GLU ALA GLU ALA ILE ALA GLU LEU ALA SER HIS PHE SEQRES 13 A 214 ASP ILE ALA ALA ILE SER VAL ALA CYS ALA LEU GLY TYR SEQRES 14 A 214 LEU ASP PHE ARG HIS PRO ASP LEU GLU TRP ARG GLN ASP SEQRES 15 A 214 HIS PRO GLN LEU ALA ALA TRP TYR PHE GLU ILE SER GLN SEQRES 16 A 214 ARG PRO SER MSE LEU ALA THR ARG PRO PRO VAL GLU GLY SEQRES 17 A 214 HIS HIS HIS HIS HIS HIS SEQRES 1 B 214 MSE SER LEU THR LEU PHE HIS ASN PRO ALA SER PRO TYR SEQRES 2 B 214 VAL ARG LYS VAL MSE VAL LEU LEU HIS GLU THR GLY GLN SEQRES 3 B 214 LEU ASN ARG VAL ALA LEU GLN ALA SER GLN LEU SER PRO SEQRES 4 B 214 VAL ALA PRO ASP ALA ALA LEU ASN GLN ASP ASN PRO LEU SEQRES 5 B 214 GLY LYS ILE PRO ALA LEU ARG LEU ASP ASN GLY GLN VAL SEQRES 6 B 214 LEU TYR ASP SER ARG VAL ILE LEU ASP TYR LEU ASP GLN SEQRES 7 B 214 GLN HIS VAL GLY ASN PRO LEU ILE PRO ARG ASP GLY SER SEQRES 8 B 214 ALA ARG TRP ARG ARG LEU THR LEU ALA ALA LEU ALA ASP SEQRES 9 B 214 GLY ILE MSE ASP ALA SER VAL LEU VAL ARG TYR GLU LEU SEQRES 10 B 214 ALA LEU ARG ALA PRO GLU LYS HIS TRP GLU GLN TRP LEU SEQRES 11 B 214 ASP GLY GLN ARG ASP LYS ILE ARG ARG ALA LEU ALA VAL SEQRES 12 B 214 LEU GLU ALA GLU ALA ILE ALA GLU LEU ALA SER HIS PHE SEQRES 13 B 214 ASP ILE ALA ALA ILE SER VAL ALA CYS ALA LEU GLY TYR SEQRES 14 B 214 LEU ASP PHE ARG HIS PRO ASP LEU GLU TRP ARG GLN ASP SEQRES 15 B 214 HIS PRO GLN LEU ALA ALA TRP TYR PHE GLU ILE SER GLN SEQRES 16 B 214 ARG PRO SER MSE LEU ALA THR ARG PRO PRO VAL GLU GLY SEQRES 17 B 214 HIS HIS HIS HIS HIS HIS MODRES 4ID0 MSE A 16 MET SELENOMETHIONINE MODRES 4ID0 MSE A 105 MET SELENOMETHIONINE MODRES 4ID0 MSE A 197 MET SELENOMETHIONINE MODRES 4ID0 MSE B 16 MET SELENOMETHIONINE MODRES 4ID0 MSE B 105 MET SELENOMETHIONINE MODRES 4ID0 MSE B 197 MET SELENOMETHIONINE HET MSE A 16 8 HET MSE A 105 8 HET MSE A 197 8 HET MSE B 16 8 HET MSE B 105 8 HET MSE B 197 8 HET ACT A 301 4 HET ACT A 302 4 HET ACT A 303 4 HET GOL A 304 6 HET ACT B 301 4 HET GSF B 302 22 HETNAM MSE SELENOMETHIONINE HETNAM ACT ACETATE ION HETNAM GOL GLYCEROL HETNAM GSF L-GAMMA-GLUTAMYL-3-SULFINO-L-ALANYLGLYCINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN GSF GLUTATHIONE SULFINATE FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 ACT 4(C2 H3 O2 1-) FORMUL 6 GOL C3 H8 O3 FORMUL 8 GSF C10 H17 N3 O8 S FORMUL 9 HOH *614(H2 O) HELIX 1 1 SER A 9 THR A 22 1 14 HELIX 2 2 GLN A 24 ASN A 26 5 3 HELIX 3 3 ASP A 66 GLN A 77 1 12 HELIX 4 4 ASP A 87 ARG A 118 1 32 HELIX 5 5 ALA A 119 HIS A 123 5 5 HELIX 6 6 TRP A 124 ALA A 146 1 23 HELIX 7 7 ALA A 146 HIS A 153 1 8 HELIX 8 8 ASP A 155 HIS A 172 1 18 HELIX 9 9 HIS A 181 SER A 192 1 12 HELIX 10 10 ARG A 194 ALA A 199 1 6 HELIX 11 11 SER B 9 THR B 22 1 14 HELIX 12 12 GLN B 24 ASN B 26 5 3 HELIX 13 13 ASP B 41 ASN B 48 1 8 HELIX 14 14 ASP B 66 GLN B 76 1 11 HELIX 15 15 ASP B 87 ARG B 118 1 32 HELIX 16 16 ALA B 119 HIS B 123 5 5 HELIX 17 17 TRP B 124 ALA B 146 1 23 HELIX 18 18 ILE B 147 ALA B 148 5 2 HELIX 19 19 GLU B 149 HIS B 153 5 5 HELIX 20 20 ASP B 155 HIS B 172 1 18 HELIX 21 21 PRO B 173 ASP B 180 5 8 HELIX 22 22 HIS B 181 SER B 192 1 12 HELIX 23 23 ARG B 194 ALA B 199 1 6 SHEET 1 A 4 VAL A 28 ALA A 32 0 SHEET 2 A 4 LEU A 1 HIS A 5 1 N LEU A 3 O GLN A 31 SHEET 3 A 4 ALA A 55 ARG A 57 -1 O ARG A 57 N THR A 2 SHEET 4 A 4 VAL A 63 LEU A 64 -1 O LEU A 64 N LEU A 56 SHEET 1 B 4 VAL B 28 ALA B 32 0 SHEET 2 B 4 LEU B 1 HIS B 5 1 N LEU B 3 O ALA B 29 SHEET 3 B 4 ALA B 55 ARG B 57 -1 O ARG B 57 N THR B 2 SHEET 4 B 4 VAL B 63 LEU B 64 -1 O LEU B 64 N LEU B 56 LINK C VAL A 15 N MSE A 16 1555 1555 1.34 LINK C MSE A 16 N VAL A 17 1555 1555 1.33 LINK C ILE A 104 N MSE A 105 1555 1555 1.32 LINK C MSE A 105 N ASP A 106 1555 1555 1.34 LINK C SER A 196 N MSE A 197 1555 1555 1.34 LINK C MSE A 197 N LEU A 198 1555 1555 1.33 LINK C VAL B 15 N MSE B 16 1555 1555 1.33 LINK C MSE B 16 N VAL B 17 1555 1555 1.34 LINK C ILE B 104 N MSE B 105 1555 1555 1.33 LINK C MSE B 105 N ASP B 106 1555 1555 1.33 LINK C SER B 196 N MSE B 197 1555 1555 1.35 LINK C MSE B 197 N LEU B 198 1555 1555 1.33 CISPEP 1 ILE A 53 PRO A 54 0 -2.64 CISPEP 2 TYR A 65 ASP A 66 0 -3.89 CISPEP 3 ILE B 53 PRO B 54 0 2.46 CISPEP 4 TYR B 65 ASP B 66 0 -5.69 SITE 1 AC1 6 TYR A 11 PRO A 54 ASP A 66 SER A 67 SITE 2 AC1 6 HOH A 411 HOH A 711 SITE 1 AC2 4 TYR A 113 HOH A 590 HOH A 628 HOH A 708 SITE 1 AC3 6 LEU A 35 TYR A 113 TYR A 167 ARG A 171 SITE 2 AC3 6 HOH A 500 HOH A 591 SITE 1 AC4 11 ARG A 132 ALA A 151 SER A 152 HIS A 153 SITE 2 AC4 11 PHE A 154 ASP A 174 HOH A 439 HOH A 484 SITE 3 AC4 11 HOH A 491 HOH A 568 HOH A 648 SITE 1 AC5 5 TYR B 167 ARG B 171 GSF B 302 HOH B 625 SITE 2 AC5 5 HOH B 631 SITE 1 AC6 25 LYS A 134 SER B 9 PRO B 10 TYR B 11 SITE 2 AC6 25 LEU B 35 SER B 36 PRO B 37 GLY B 51 SITE 3 AC6 25 LYS B 52 ILE B 53 PRO B 54 ASP B 66 SITE 4 AC6 25 SER B 67 TYR B 113 ACT B 301 HOH B 401 SITE 5 AC6 25 HOH B 403 HOH B 419 HOH B 421 HOH B 435 SITE 6 AC6 25 HOH B 484 HOH B 487 HOH B 515 HOH B 544 SITE 7 AC6 25 HOH B 688 CRYST1 68.542 69.741 80.182 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014590 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014339 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012472 0.00000