data_4ID2 # _entry.id 4ID2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4ID2 pdb_00004id2 10.2210/pdb4id2/pdb RCSB RCSB076599 ? ? WWPDB D_1000076599 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id JCSG-416984 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 4ID2 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-12-11 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a hypothetical protein (BACOVA_05496) from Bacteroides ovatus ATCC 8483 at 2.15 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 4ID2 _cell.length_a 67.254 _cell.length_b 74.421 _cell.length_c 71.206 _cell.angle_alpha 90.000 _cell.angle_beta 117.310 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4ID2 _symmetry.Int_Tables_number 5 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uncharacterized protein' 18471.895 2 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 4 water nat water 18.015 109 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GCGGKKGSSDNTSTLA(MSE)IDSVDAHGLQR(MSE)QTSKSETDFKFKGKDYHSLVSRTPDDNLPHVTNELGDTYVDNK IVLHLTRGNETVLNKTFTKNDFSSVVDANFLSKSILEGIVYDKTTPQGIVYAASVCYPQTDLY(MSE)PLSITITADGK (MSE)SIQKVDILEEDYDDEAPN ; _entity_poly.pdbx_seq_one_letter_code_can ;GCGGKKGSSDNTSTLAMIDSVDAHGLQRMQTSKSETDFKFKGKDYHSLVSRTPDDNLPHVTNELGDTYVDNKIVLHLTRG NETVLNKTFTKNDFSSVVDANFLSKSILEGIVYDKTTPQGIVYAASVCYPQTDLYMPLSITITADGKMSIQKVDILEEDY DDEAPN ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier JCSG-416984 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 CYS n 1 3 GLY n 1 4 GLY n 1 5 LYS n 1 6 LYS n 1 7 GLY n 1 8 SER n 1 9 SER n 1 10 ASP n 1 11 ASN n 1 12 THR n 1 13 SER n 1 14 THR n 1 15 LEU n 1 16 ALA n 1 17 MSE n 1 18 ILE n 1 19 ASP n 1 20 SER n 1 21 VAL n 1 22 ASP n 1 23 ALA n 1 24 HIS n 1 25 GLY n 1 26 LEU n 1 27 GLN n 1 28 ARG n 1 29 MSE n 1 30 GLN n 1 31 THR n 1 32 SER n 1 33 LYS n 1 34 SER n 1 35 GLU n 1 36 THR n 1 37 ASP n 1 38 PHE n 1 39 LYS n 1 40 PHE n 1 41 LYS n 1 42 GLY n 1 43 LYS n 1 44 ASP n 1 45 TYR n 1 46 HIS n 1 47 SER n 1 48 LEU n 1 49 VAL n 1 50 SER n 1 51 ARG n 1 52 THR n 1 53 PRO n 1 54 ASP n 1 55 ASP n 1 56 ASN n 1 57 LEU n 1 58 PRO n 1 59 HIS n 1 60 VAL n 1 61 THR n 1 62 ASN n 1 63 GLU n 1 64 LEU n 1 65 GLY n 1 66 ASP n 1 67 THR n 1 68 TYR n 1 69 VAL n 1 70 ASP n 1 71 ASN n 1 72 LYS n 1 73 ILE n 1 74 VAL n 1 75 LEU n 1 76 HIS n 1 77 LEU n 1 78 THR n 1 79 ARG n 1 80 GLY n 1 81 ASN n 1 82 GLU n 1 83 THR n 1 84 VAL n 1 85 LEU n 1 86 ASN n 1 87 LYS n 1 88 THR n 1 89 PHE n 1 90 THR n 1 91 LYS n 1 92 ASN n 1 93 ASP n 1 94 PHE n 1 95 SER n 1 96 SER n 1 97 VAL n 1 98 VAL n 1 99 ASP n 1 100 ALA n 1 101 ASN n 1 102 PHE n 1 103 LEU n 1 104 SER n 1 105 LYS n 1 106 SER n 1 107 ILE n 1 108 LEU n 1 109 GLU n 1 110 GLY n 1 111 ILE n 1 112 VAL n 1 113 TYR n 1 114 ASP n 1 115 LYS n 1 116 THR n 1 117 THR n 1 118 PRO n 1 119 GLN n 1 120 GLY n 1 121 ILE n 1 122 VAL n 1 123 TYR n 1 124 ALA n 1 125 ALA n 1 126 SER n 1 127 VAL n 1 128 CYS n 1 129 TYR n 1 130 PRO n 1 131 GLN n 1 132 THR n 1 133 ASP n 1 134 LEU n 1 135 TYR n 1 136 MSE n 1 137 PRO n 1 138 LEU n 1 139 SER n 1 140 ILE n 1 141 THR n 1 142 ILE n 1 143 THR n 1 144 ALA n 1 145 ASP n 1 146 GLY n 1 147 LYS n 1 148 MSE n 1 149 SER n 1 150 ILE n 1 151 GLN n 1 152 LYS n 1 153 VAL n 1 154 ASP n 1 155 ILE n 1 156 LEU n 1 157 GLU n 1 158 GLU n 1 159 ASP n 1 160 TYR n 1 161 ASP n 1 162 ASP n 1 163 GLU n 1 164 ALA n 1 165 PRO n 1 166 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 8483' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacteroides ovatus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 411476 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain PB1 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A7M5V0_BACOV _struct_ref.pdbx_db_accession A7M5V0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;CGGKKGSSDNTSTLAMIDSVDAHGLQRMQTSKSETDFKFKGKDYHSLVSRTPDDNLPHVTNELGDTYVDNKIVLHLTRGN ETVLNKTFTKNDFSSVVDANFLSKSILEGIVYDKTTPQGIVYAASVCYPQTDLYMPLSITITADGKMSIQKVDILEEDYD DEAPN ; _struct_ref.pdbx_align_begin 19 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4ID2 A 2 ? 166 ? A7M5V0 19 ? 183 ? 19 183 2 1 4ID2 B 2 ? 166 ? A7M5V0 19 ? 183 ? 19 183 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4ID2 GLY A 1 ? UNP A7M5V0 ? ? 'expression tag' 18 1 2 4ID2 GLY B 1 ? UNP A7M5V0 ? ? 'expression tag' 18 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 4ID2 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 42.60 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '2.0 M ammonium sulfate, 0.01 M TCEP Hydrochloride, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.details 'KOHZU: Double Crystal Si(111)' _diffrn_detector.pdbx_collection_date 2012-10-18 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double Crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.918401 1.0 2 0.979485 1.0 3 0.979268 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline 8.2.2 _diffrn_source.type 'ALS BEAMLINE 8.2.2' _diffrn_source.pdbx_wavelength_list '0.918401, 0.979485, 0.979268' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ALS # _reflns.entry_id 4ID2 _reflns.d_resolution_high 2.15 _reflns.d_resolution_low 24.947 _reflns.number_obs 16940 _reflns.pdbx_Rmerge_I_obs 0.048 _reflns.pdbx_netI_over_sigmaI 10.010 _reflns.percent_possible_obs 96.500 _reflns.B_iso_Wilson_estimate 44.273 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.150 2.230 5725 ? 3127 0.766 1.2 ? ? ? ? ? 89.400 1 1 2.230 2.320 6074 ? 3250 0.587 1.6 ? ? ? ? ? 97.300 2 1 2.320 2.420 5870 ? 3136 0.449 2.0 ? ? ? ? ? 97.200 3 1 2.420 2.550 6184 ? 3329 0.396 2.4 ? ? ? ? ? 97.700 4 1 2.550 2.710 6118 ? 3276 0.239 3.6 ? ? ? ? ? 97.600 5 1 2.710 2.920 6279 ? 3344 0.154 5.4 ? ? ? ? ? 98.200 6 1 2.920 3.210 6059 ? 3232 0.076 9.9 ? ? ? ? ? 97.700 7 1 3.210 3.670 6084 ? 3260 0.039 17.3 ? ? ? ? ? 97.100 8 1 3.670 4.610 6005 ? 3234 0.027 24.9 ? ? ? ? ? 96.500 9 1 4.610 ? 6203 ? 3324 0.018 31.2 ? ? ? ? ? 96.800 10 1 # _refine.entry_id 4ID2 _refine.ls_d_res_high 2.1500 _refine.ls_d_res_low 24.947 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.2900 _refine.ls_number_reflns_obs 16913 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. ZERO OCCUPANCY HYDROGENS WERE INCLUDED DURING REFINEMENT TO IMPROVE THE ANTI-BUMPING RESTRAINTS. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. 3. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 4. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 5. NCS RESTRAINTS WERE APPLIED DURING REFINEMENT USING LSSR (-AUTONCS) IN BUSTER. 6. MAD PHASE RESTRAINTS WERE USED DURING REFINEMENT. 7. SULPFATE (SO4) IONS AND EDO (ETHYLENE GLYCOL) MOLECULES FROM THE CRYSTALLIZATION/CRYOPROTECTION SOLUTION ARE MODELED. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2086 _refine.ls_R_factor_R_work 0.2070 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2332 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.5200 _refine.ls_number_reflns_R_free 933 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 61.5614 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -4.0304 _refine.aniso_B[2][2] 11.0061 _refine.aniso_B[3][3] -6.9757 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.3249 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9387 _refine.correlation_coeff_Fo_to_Fc_free 0.9162 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 155.640 _refine.B_iso_min 29.510 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4ID2 _refine_analyze.Luzzati_coordinate_error_obs 0.412 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2094 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.number_atoms_solvent 109 _refine_hist.number_atoms_total 2216 _refine_hist.d_res_high 2.1500 _refine_hist.d_res_low 24.947 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id t_dihedral_angle_d 1190 ? ? 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' t_trig_c_planes 52 ? ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_gen_planes 610 ? ? 5.000 HARMONIC 'X-RAY DIFFRACTION' t_it 4202 ? ? 20.000 HARMONIC 'X-RAY DIFFRACTION' t_nbd ? ? ? ? ? 'X-RAY DIFFRACTION' t_improper_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_pseud_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_chiral_improper_torsion 303 ? ? 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_sum_occupancies ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_distance ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_ideal_dist_contact 4310 ? ? 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_bond_d 4202 0.007 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_angle_deg 7597 1.000 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_omega_torsion ? 3.110 ? ? ? 'X-RAY DIFFRACTION' t_other_torsion ? 2.700 ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.1500 _refine_ls_shell.d_res_low 2.2800 _refine_ls_shell.pdbx_total_number_of_bins_used 9 _refine_ls_shell.percent_reflns_obs 99.2900 _refine_ls_shell.number_reflns_R_work 2534 _refine_ls_shell.R_factor_all 0.2290 _refine_ls_shell.R_factor_R_work 0.2277 _refine_ls_shell.R_factor_R_free 0.2519 _refine_ls_shell.percent_reflns_R_free 4.9900 _refine_ls_shell.number_reflns_R_free 133 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2667 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.title 'Crystal structure of a DUF4738 family protein (BACOVA_05496) from Bacteroides ovatus ATCC 8483 at 2.15 A resolution' _struct.entry_id 4ID2 _struct.pdbx_model_type_details ? _struct.pdbx_model_details ? _struct.pdbx_CASP_flag Y # _struct_keywords.text ;beta barrel like fold, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, UNKNOWN FUNCTION ; _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.entry_id 4ID2 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 90 ? SER A 95 ? THR A 107 SER A 112 5 ? 6 HELX_P HELX_P2 2 ASP A 99 ? LYS A 105 ? ASP A 116 LYS A 122 1 ? 7 HELX_P HELX_P3 3 THR B 90 ? SER B 95 ? THR B 107 SER B 112 5 ? 6 HELX_P HELX_P4 4 ASP B 99 ? LYS B 105 ? ASP B 116 LYS B 122 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ARG 28 C ? ? ? 1_555 A MSE 29 N ? ? A ARG 45 A MSE 46 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale2 covale both ? A MSE 29 C ? ? ? 1_555 A GLN 30 N ? ? A MSE 46 A GLN 47 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale3 covale both ? A TYR 135 C ? ? ? 1_555 A MSE 136 N ? ? A TYR 152 A MSE 153 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale4 covale both ? A MSE 136 C ? ? ? 1_555 A PRO 137 N ? ? A MSE 153 A PRO 154 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale5 covale both ? A LYS 147 C ? ? ? 1_555 A MSE 148 N ? ? A LYS 164 A MSE 165 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale6 covale both ? A MSE 148 C ? ? ? 1_555 A SER 149 N ? ? A MSE 165 A SER 166 1_555 ? ? ? ? ? ? ? 1.348 ? ? covale7 covale both ? B ARG 28 C ? ? ? 1_555 B MSE 29 N ? ? B ARG 45 B MSE 46 1_555 ? ? ? ? ? ? ? 1.363 ? ? covale8 covale both ? B MSE 29 C ? ? ? 1_555 B GLN 30 N ? ? B MSE 46 B GLN 47 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale9 covale both ? B TYR 135 C ? ? ? 1_555 B MSE 136 N ? ? B TYR 152 B MSE 153 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale10 covale both ? B MSE 136 C ? ? ? 1_555 B PRO 137 N ? ? B MSE 153 B PRO 154 1_555 ? ? ? ? ? ? ? 1.348 ? ? covale11 covale both ? B LYS 147 C ? ? ? 1_555 B MSE 148 N ? ? B LYS 164 B MSE 165 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale12 covale both ? B MSE 148 C ? ? ? 1_555 B SER 149 N ? ? B MSE 165 B SER 166 1_555 ? ? ? ? ? ? ? 1.346 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 8 ? C ? 4 ? D ? 2 ? E ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 26 ? GLN A 27 ? LEU A 43 GLN A 44 A 2 THR A 67 ? TYR A 68 ? THR A 84 TYR A 85 A 3 VAL A 60 ? THR A 61 ? VAL A 77 THR A 78 B 1 GLU A 82 ? PHE A 89 ? GLU A 99 PHE A 106 B 2 ASN A 71 ? ARG A 79 ? ASN A 88 ARG A 96 B 3 LYS A 43 ? PRO A 53 ? LYS A 60 PRO A 70 B 4 LYS A 33 ? PHE A 40 ? LYS A 50 PHE A 57 B 5 LYS B 33 ? PHE B 40 ? LYS B 50 PHE B 57 B 6 LYS B 43 ? PRO B 53 ? LYS B 60 PRO B 70 B 7 ASN B 71 ? ARG B 79 ? ASN B 88 ARG B 96 B 8 GLU B 82 ? PHE B 89 ? GLU B 99 PHE B 106 C 1 ILE A 107 ? THR A 116 ? ILE A 124 THR A 133 C 2 ILE A 121 ? CYS A 128 ? ILE A 138 CYS A 145 C 3 TYR A 135 ? ILE A 142 ? TYR A 152 ILE A 159 C 4 MSE A 148 ? LYS A 152 ? MSE A 165 LYS A 169 D 1 VAL B 60 ? THR B 61 ? VAL B 77 THR B 78 D 2 THR B 67 ? TYR B 68 ? THR B 84 TYR B 85 E 1 ILE B 107 ? THR B 116 ? ILE B 124 THR B 133 E 2 ILE B 121 ? CYS B 128 ? ILE B 138 CYS B 145 E 3 TYR B 135 ? ILE B 142 ? TYR B 152 ILE B 159 E 4 MSE B 148 ? LYS B 152 ? MSE B 165 LYS B 169 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 27 ? N GLN A 44 O THR A 67 ? O THR A 84 A 2 3 O TYR A 68 ? O TYR A 85 N VAL A 60 ? N VAL A 77 B 1 2 O PHE A 89 ? O PHE A 106 N ILE A 73 ? N ILE A 90 B 2 3 O HIS A 76 ? O HIS A 93 N LEU A 48 ? N LEU A 65 B 3 4 O TYR A 45 ? O TYR A 62 N PHE A 38 ? N PHE A 55 B 4 5 N ASP A 37 ? N ASP A 54 O GLU B 35 ? O GLU B 52 B 5 6 N PHE B 38 ? N PHE B 55 O TYR B 45 ? O TYR B 62 B 6 7 N LEU B 48 ? N LEU B 65 O HIS B 76 ? O HIS B 93 B 7 8 N ILE B 73 ? N ILE B 90 O PHE B 89 ? O PHE B 106 C 1 2 N VAL A 112 ? N VAL A 129 O ALA A 124 ? O ALA A 141 C 2 3 N ILE A 121 ? N ILE A 138 O ILE A 142 ? O ILE A 159 C 3 4 N THR A 141 ? N THR A 158 O SER A 149 ? O SER A 166 D 1 2 N VAL B 60 ? N VAL B 77 O TYR B 68 ? O TYR B 85 E 1 2 N LYS B 115 ? N LYS B 132 O VAL B 122 ? O VAL B 139 E 2 3 N ILE B 121 ? N ILE B 138 O ILE B 142 ? O ILE B 159 E 3 4 N THR B 141 ? N THR B 158 O SER B 149 ? O SER B 166 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 201 ? 7 'BINDING SITE FOR RESIDUE SO4 A 201' AC2 Software A EDO 202 ? 3 'BINDING SITE FOR RESIDUE EDO A 202' AC3 Software B EDO 201 ? 6 'BINDING SITE FOR RESIDUE EDO B 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 ASP A 54 ? ASP A 71 . ? 1_555 ? 2 AC1 7 ASN A 56 ? ASN A 73 . ? 1_555 ? 3 AC1 7 HOH F . ? HOH A 301 . ? 1_555 ? 4 AC1 7 HOH F . ? HOH A 314 . ? 1_555 ? 5 AC1 7 ASP B 54 ? ASP B 71 . ? 3_545 ? 6 AC1 7 ASN B 56 ? ASN B 73 . ? 3_545 ? 7 AC1 7 LYS B 72 ? LYS B 89 . ? 3_545 ? 8 AC2 3 CYS A 128 ? CYS A 145 . ? 1_555 ? 9 AC2 3 PRO A 130 ? PRO A 147 . ? 1_555 ? 10 AC2 3 HOH F . ? HOH A 343 . ? 1_555 ? 11 AC3 6 THR A 83 ? THR A 100 . ? 4_556 ? 12 AC3 6 ASN A 86 ? ASN A 103 . ? 4_556 ? 13 AC3 6 THR B 83 ? THR B 100 . ? 1_555 ? 14 AC3 6 ASN B 86 ? ASN B 103 . ? 1_555 ? 15 AC3 6 HOH G . ? HOH B 328 . ? 1_555 ? 16 AC3 6 HOH G . ? HOH B 330 . ? 1_555 ? # _atom_sites.entry_id 4ID2 _atom_sites.fract_transf_matrix[1][1] 0.014869 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007678 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013437 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015805 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 18 ? ? ? A . n A 1 2 CYS 2 19 ? ? ? A . n A 1 3 GLY 3 20 ? ? ? A . n A 1 4 GLY 4 21 ? ? ? A . n A 1 5 LYS 5 22 ? ? ? A . n A 1 6 LYS 6 23 ? ? ? A . n A 1 7 GLY 7 24 ? ? ? A . n A 1 8 SER 8 25 ? ? ? A . n A 1 9 SER 9 26 ? ? ? A . n A 1 10 ASP 10 27 ? ? ? A . n A 1 11 ASN 11 28 ? ? ? A . n A 1 12 THR 12 29 ? ? ? A . n A 1 13 SER 13 30 ? ? ? A . n A 1 14 THR 14 31 ? ? ? A . n A 1 15 LEU 15 32 ? ? ? A . n A 1 16 ALA 16 33 ? ? ? A . n A 1 17 MSE 17 34 ? ? ? A . n A 1 18 ILE 18 35 ? ? ? A . n A 1 19 ASP 19 36 ? ? ? A . n A 1 20 SER 20 37 ? ? ? A . n A 1 21 VAL 21 38 ? ? ? A . n A 1 22 ASP 22 39 ? ? ? A . n A 1 23 ALA 23 40 ? ? ? A . n A 1 24 HIS 24 41 ? ? ? A . n A 1 25 GLY 25 42 42 GLY GLY A . n A 1 26 LEU 26 43 43 LEU LEU A . n A 1 27 GLN 27 44 44 GLN GLN A . n A 1 28 ARG 28 45 45 ARG ARG A . n A 1 29 MSE 29 46 46 MSE MSE A . n A 1 30 GLN 30 47 47 GLN GLN A . n A 1 31 THR 31 48 48 THR THR A . n A 1 32 SER 32 49 49 SER SER A . n A 1 33 LYS 33 50 50 LYS LYS A . n A 1 34 SER 34 51 51 SER SER A . n A 1 35 GLU 35 52 52 GLU GLU A . n A 1 36 THR 36 53 53 THR THR A . n A 1 37 ASP 37 54 54 ASP ASP A . n A 1 38 PHE 38 55 55 PHE PHE A . n A 1 39 LYS 39 56 56 LYS LYS A . n A 1 40 PHE 40 57 57 PHE PHE A . n A 1 41 LYS 41 58 58 LYS LYS A . n A 1 42 GLY 42 59 59 GLY GLY A . n A 1 43 LYS 43 60 60 LYS LYS A . n A 1 44 ASP 44 61 61 ASP ASP A . n A 1 45 TYR 45 62 62 TYR TYR A . n A 1 46 HIS 46 63 63 HIS HIS A . n A 1 47 SER 47 64 64 SER SER A . n A 1 48 LEU 48 65 65 LEU LEU A . n A 1 49 VAL 49 66 66 VAL VAL A . n A 1 50 SER 50 67 67 SER SER A . n A 1 51 ARG 51 68 68 ARG ARG A . n A 1 52 THR 52 69 69 THR THR A . n A 1 53 PRO 53 70 70 PRO PRO A . n A 1 54 ASP 54 71 71 ASP ASP A . n A 1 55 ASP 55 72 72 ASP ASP A . n A 1 56 ASN 56 73 73 ASN ASN A . n A 1 57 LEU 57 74 74 LEU LEU A . n A 1 58 PRO 58 75 75 PRO PRO A . n A 1 59 HIS 59 76 76 HIS HIS A . n A 1 60 VAL 60 77 77 VAL VAL A . n A 1 61 THR 61 78 78 THR THR A . n A 1 62 ASN 62 79 79 ASN ASN A . n A 1 63 GLU 63 80 80 GLU GLU A . n A 1 64 LEU 64 81 81 LEU LEU A . n A 1 65 GLY 65 82 82 GLY GLY A . n A 1 66 ASP 66 83 83 ASP ASP A . n A 1 67 THR 67 84 84 THR THR A . n A 1 68 TYR 68 85 85 TYR TYR A . n A 1 69 VAL 69 86 86 VAL VAL A . n A 1 70 ASP 70 87 87 ASP ASP A . n A 1 71 ASN 71 88 88 ASN ASN A . n A 1 72 LYS 72 89 89 LYS LYS A . n A 1 73 ILE 73 90 90 ILE ILE A . n A 1 74 VAL 74 91 91 VAL VAL A . n A 1 75 LEU 75 92 92 LEU LEU A . n A 1 76 HIS 76 93 93 HIS HIS A . n A 1 77 LEU 77 94 94 LEU LEU A . n A 1 78 THR 78 95 95 THR THR A . n A 1 79 ARG 79 96 96 ARG ARG A . n A 1 80 GLY 80 97 97 GLY GLY A . n A 1 81 ASN 81 98 98 ASN ASN A . n A 1 82 GLU 82 99 99 GLU GLU A . n A 1 83 THR 83 100 100 THR THR A . n A 1 84 VAL 84 101 101 VAL VAL A . n A 1 85 LEU 85 102 102 LEU LEU A . n A 1 86 ASN 86 103 103 ASN ASN A . n A 1 87 LYS 87 104 104 LYS LYS A . n A 1 88 THR 88 105 105 THR THR A . n A 1 89 PHE 89 106 106 PHE PHE A . n A 1 90 THR 90 107 107 THR THR A . n A 1 91 LYS 91 108 108 LYS LYS A . n A 1 92 ASN 92 109 109 ASN ASN A . n A 1 93 ASP 93 110 110 ASP ASP A . n A 1 94 PHE 94 111 111 PHE PHE A . n A 1 95 SER 95 112 112 SER SER A . n A 1 96 SER 96 113 113 SER SER A . n A 1 97 VAL 97 114 114 VAL VAL A . n A 1 98 VAL 98 115 115 VAL VAL A . n A 1 99 ASP 99 116 116 ASP ASP A . n A 1 100 ALA 100 117 117 ALA ALA A . n A 1 101 ASN 101 118 118 ASN ASN A . n A 1 102 PHE 102 119 119 PHE PHE A . n A 1 103 LEU 103 120 120 LEU LEU A . n A 1 104 SER 104 121 121 SER SER A . n A 1 105 LYS 105 122 122 LYS LYS A . n A 1 106 SER 106 123 123 SER SER A . n A 1 107 ILE 107 124 124 ILE ILE A . n A 1 108 LEU 108 125 125 LEU LEU A . n A 1 109 GLU 109 126 126 GLU GLU A . n A 1 110 GLY 110 127 127 GLY GLY A . n A 1 111 ILE 111 128 128 ILE ILE A . n A 1 112 VAL 112 129 129 VAL VAL A . n A 1 113 TYR 113 130 130 TYR TYR A . n A 1 114 ASP 114 131 131 ASP ASP A . n A 1 115 LYS 115 132 132 LYS LYS A . n A 1 116 THR 116 133 133 THR THR A . n A 1 117 THR 117 134 134 THR THR A . n A 1 118 PRO 118 135 135 PRO PRO A . n A 1 119 GLN 119 136 136 GLN GLN A . n A 1 120 GLY 120 137 137 GLY GLY A . n A 1 121 ILE 121 138 138 ILE ILE A . n A 1 122 VAL 122 139 139 VAL VAL A . n A 1 123 TYR 123 140 140 TYR TYR A . n A 1 124 ALA 124 141 141 ALA ALA A . n A 1 125 ALA 125 142 142 ALA ALA A . n A 1 126 SER 126 143 143 SER SER A . n A 1 127 VAL 127 144 144 VAL VAL A . n A 1 128 CYS 128 145 145 CYS CYS A . n A 1 129 TYR 129 146 146 TYR TYR A . n A 1 130 PRO 130 147 147 PRO PRO A . n A 1 131 GLN 131 148 148 GLN GLN A . n A 1 132 THR 132 149 149 THR THR A . n A 1 133 ASP 133 150 150 ASP ASP A . n A 1 134 LEU 134 151 151 LEU LEU A . n A 1 135 TYR 135 152 152 TYR TYR A . n A 1 136 MSE 136 153 153 MSE MSE A . n A 1 137 PRO 137 154 154 PRO PRO A . n A 1 138 LEU 138 155 155 LEU LEU A . n A 1 139 SER 139 156 156 SER SER A . n A 1 140 ILE 140 157 157 ILE ILE A . n A 1 141 THR 141 158 158 THR THR A . n A 1 142 ILE 142 159 159 ILE ILE A . n A 1 143 THR 143 160 160 THR THR A . n A 1 144 ALA 144 161 161 ALA ALA A . n A 1 145 ASP 145 162 162 ASP ASP A . n A 1 146 GLY 146 163 163 GLY GLY A . n A 1 147 LYS 147 164 164 LYS LYS A . n A 1 148 MSE 148 165 165 MSE MSE A . n A 1 149 SER 149 166 166 SER SER A . n A 1 150 ILE 150 167 167 ILE ILE A . n A 1 151 GLN 151 168 168 GLN GLN A . n A 1 152 LYS 152 169 169 LYS LYS A . n A 1 153 VAL 153 170 170 VAL VAL A . n A 1 154 ASP 154 171 171 ASP ASP A . n A 1 155 ILE 155 172 172 ILE ILE A . n A 1 156 LEU 156 173 173 LEU LEU A . n A 1 157 GLU 157 174 174 GLU GLU A . n A 1 158 GLU 158 175 175 GLU GLU A . n A 1 159 ASP 159 176 176 ASP ASP A . n A 1 160 TYR 160 177 177 TYR TYR A . n A 1 161 ASP 161 178 ? ? ? A . n A 1 162 ASP 162 179 ? ? ? A . n A 1 163 GLU 163 180 ? ? ? A . n A 1 164 ALA 164 181 ? ? ? A . n A 1 165 PRO 165 182 ? ? ? A . n A 1 166 ASN 166 183 ? ? ? A . n B 1 1 GLY 1 18 ? ? ? B . n B 1 2 CYS 2 19 ? ? ? B . n B 1 3 GLY 3 20 ? ? ? B . n B 1 4 GLY 4 21 ? ? ? B . n B 1 5 LYS 5 22 ? ? ? B . n B 1 6 LYS 6 23 ? ? ? B . n B 1 7 GLY 7 24 ? ? ? B . n B 1 8 SER 8 25 ? ? ? B . n B 1 9 SER 9 26 ? ? ? B . n B 1 10 ASP 10 27 ? ? ? B . n B 1 11 ASN 11 28 ? ? ? B . n B 1 12 THR 12 29 ? ? ? B . n B 1 13 SER 13 30 ? ? ? B . n B 1 14 THR 14 31 ? ? ? B . n B 1 15 LEU 15 32 ? ? ? B . n B 1 16 ALA 16 33 ? ? ? B . n B 1 17 MSE 17 34 ? ? ? B . n B 1 18 ILE 18 35 ? ? ? B . n B 1 19 ASP 19 36 ? ? ? B . n B 1 20 SER 20 37 ? ? ? B . n B 1 21 VAL 21 38 ? ? ? B . n B 1 22 ASP 22 39 ? ? ? B . n B 1 23 ALA 23 40 ? ? ? B . n B 1 24 HIS 24 41 ? ? ? B . n B 1 25 GLY 25 42 42 GLY GLY B . n B 1 26 LEU 26 43 43 LEU LEU B . n B 1 27 GLN 27 44 44 GLN GLN B . n B 1 28 ARG 28 45 45 ARG ARG B . n B 1 29 MSE 29 46 46 MSE MSE B . n B 1 30 GLN 30 47 47 GLN GLN B . n B 1 31 THR 31 48 48 THR THR B . n B 1 32 SER 32 49 49 SER SER B . n B 1 33 LYS 33 50 50 LYS LYS B . n B 1 34 SER 34 51 51 SER SER B . n B 1 35 GLU 35 52 52 GLU GLU B . n B 1 36 THR 36 53 53 THR THR B . n B 1 37 ASP 37 54 54 ASP ASP B . n B 1 38 PHE 38 55 55 PHE PHE B . n B 1 39 LYS 39 56 56 LYS LYS B . n B 1 40 PHE 40 57 57 PHE PHE B . n B 1 41 LYS 41 58 58 LYS LYS B . n B 1 42 GLY 42 59 59 GLY GLY B . n B 1 43 LYS 43 60 60 LYS LYS B . n B 1 44 ASP 44 61 61 ASP ASP B . n B 1 45 TYR 45 62 62 TYR TYR B . n B 1 46 HIS 46 63 63 HIS HIS B . n B 1 47 SER 47 64 64 SER SER B . n B 1 48 LEU 48 65 65 LEU LEU B . n B 1 49 VAL 49 66 66 VAL VAL B . n B 1 50 SER 50 67 67 SER SER B . n B 1 51 ARG 51 68 68 ARG ARG B . n B 1 52 THR 52 69 69 THR THR B . n B 1 53 PRO 53 70 70 PRO PRO B . n B 1 54 ASP 54 71 71 ASP ASP B . n B 1 55 ASP 55 72 72 ASP ASP B . n B 1 56 ASN 56 73 73 ASN ASN B . n B 1 57 LEU 57 74 74 LEU LEU B . n B 1 58 PRO 58 75 75 PRO PRO B . n B 1 59 HIS 59 76 76 HIS HIS B . n B 1 60 VAL 60 77 77 VAL VAL B . n B 1 61 THR 61 78 78 THR THR B . n B 1 62 ASN 62 79 79 ASN ASN B . n B 1 63 GLU 63 80 80 GLU GLU B . n B 1 64 LEU 64 81 81 LEU LEU B . n B 1 65 GLY 65 82 82 GLY GLY B . n B 1 66 ASP 66 83 83 ASP ASP B . n B 1 67 THR 67 84 84 THR THR B . n B 1 68 TYR 68 85 85 TYR TYR B . n B 1 69 VAL 69 86 86 VAL VAL B . n B 1 70 ASP 70 87 87 ASP ASP B . n B 1 71 ASN 71 88 88 ASN ASN B . n B 1 72 LYS 72 89 89 LYS LYS B . n B 1 73 ILE 73 90 90 ILE ILE B . n B 1 74 VAL 74 91 91 VAL VAL B . n B 1 75 LEU 75 92 92 LEU LEU B . n B 1 76 HIS 76 93 93 HIS HIS B . n B 1 77 LEU 77 94 94 LEU LEU B . n B 1 78 THR 78 95 95 THR THR B . n B 1 79 ARG 79 96 96 ARG ARG B . n B 1 80 GLY 80 97 97 GLY GLY B . n B 1 81 ASN 81 98 98 ASN ASN B . n B 1 82 GLU 82 99 99 GLU GLU B . n B 1 83 THR 83 100 100 THR THR B . n B 1 84 VAL 84 101 101 VAL VAL B . n B 1 85 LEU 85 102 102 LEU LEU B . n B 1 86 ASN 86 103 103 ASN ASN B . n B 1 87 LYS 87 104 104 LYS LYS B . n B 1 88 THR 88 105 105 THR THR B . n B 1 89 PHE 89 106 106 PHE PHE B . n B 1 90 THR 90 107 107 THR THR B . n B 1 91 LYS 91 108 108 LYS LYS B . n B 1 92 ASN 92 109 109 ASN ASN B . n B 1 93 ASP 93 110 110 ASP ASP B . n B 1 94 PHE 94 111 111 PHE PHE B . n B 1 95 SER 95 112 112 SER SER B . n B 1 96 SER 96 113 113 SER SER B . n B 1 97 VAL 97 114 114 VAL VAL B . n B 1 98 VAL 98 115 115 VAL VAL B . n B 1 99 ASP 99 116 116 ASP ASP B . n B 1 100 ALA 100 117 117 ALA ALA B . n B 1 101 ASN 101 118 118 ASN ASN B . n B 1 102 PHE 102 119 119 PHE PHE B . n B 1 103 LEU 103 120 120 LEU LEU B . n B 1 104 SER 104 121 121 SER SER B . n B 1 105 LYS 105 122 122 LYS LYS B . n B 1 106 SER 106 123 123 SER SER B . n B 1 107 ILE 107 124 124 ILE ILE B . n B 1 108 LEU 108 125 125 LEU LEU B . n B 1 109 GLU 109 126 126 GLU GLU B . n B 1 110 GLY 110 127 127 GLY GLY B . n B 1 111 ILE 111 128 128 ILE ILE B . n B 1 112 VAL 112 129 129 VAL VAL B . n B 1 113 TYR 113 130 130 TYR TYR B . n B 1 114 ASP 114 131 131 ASP ASP B . n B 1 115 LYS 115 132 132 LYS LYS B . n B 1 116 THR 116 133 133 THR THR B . n B 1 117 THR 117 134 134 THR THR B . n B 1 118 PRO 118 135 135 PRO PRO B . n B 1 119 GLN 119 136 136 GLN GLN B . n B 1 120 GLY 120 137 137 GLY GLY B . n B 1 121 ILE 121 138 138 ILE ILE B . n B 1 122 VAL 122 139 139 VAL VAL B . n B 1 123 TYR 123 140 140 TYR TYR B . n B 1 124 ALA 124 141 141 ALA ALA B . n B 1 125 ALA 125 142 142 ALA ALA B . n B 1 126 SER 126 143 143 SER SER B . n B 1 127 VAL 127 144 144 VAL VAL B . n B 1 128 CYS 128 145 145 CYS CYS B . n B 1 129 TYR 129 146 146 TYR TYR B . n B 1 130 PRO 130 147 147 PRO PRO B . n B 1 131 GLN 131 148 148 GLN GLN B . n B 1 132 THR 132 149 149 THR THR B . n B 1 133 ASP 133 150 150 ASP ASP B . n B 1 134 LEU 134 151 151 LEU LEU B . n B 1 135 TYR 135 152 152 TYR TYR B . n B 1 136 MSE 136 153 153 MSE MSE B . n B 1 137 PRO 137 154 154 PRO PRO B . n B 1 138 LEU 138 155 155 LEU LEU B . n B 1 139 SER 139 156 156 SER SER B . n B 1 140 ILE 140 157 157 ILE ILE B . n B 1 141 THR 141 158 158 THR THR B . n B 1 142 ILE 142 159 159 ILE ILE B . n B 1 143 THR 143 160 160 THR THR B . n B 1 144 ALA 144 161 161 ALA ALA B . n B 1 145 ASP 145 162 162 ASP ASP B . n B 1 146 GLY 146 163 163 GLY GLY B . n B 1 147 LYS 147 164 164 LYS LYS B . n B 1 148 MSE 148 165 165 MSE MSE B . n B 1 149 SER 149 166 166 SER SER B . n B 1 150 ILE 150 167 167 ILE ILE B . n B 1 151 GLN 151 168 168 GLN GLN B . n B 1 152 LYS 152 169 169 LYS LYS B . n B 1 153 VAL 153 170 170 VAL VAL B . n B 1 154 ASP 154 171 171 ASP ASP B . n B 1 155 ILE 155 172 172 ILE ILE B . n B 1 156 LEU 156 173 173 LEU LEU B . n B 1 157 GLU 157 174 174 GLU GLU B . n B 1 158 GLU 158 175 175 GLU GLU B . n B 1 159 ASP 159 176 176 ASP ASP B . n B 1 160 TYR 160 177 177 TYR TYR B . n B 1 161 ASP 161 178 ? ? ? B . n B 1 162 ASP 162 179 ? ? ? B . n B 1 163 GLU 163 180 ? ? ? B . n B 1 164 ALA 164 181 ? ? ? B . n B 1 165 PRO 165 182 ? ? ? B . n B 1 166 ASN 166 183 ? ? ? B . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 1 201 200 SO4 SO4 A . D 3 EDO 1 202 202 EDO EDO A . E 3 EDO 1 201 201 EDO EDO B . F 4 HOH 1 301 203 HOH HOH A . F 4 HOH 2 302 206 HOH HOH A . F 4 HOH 3 303 207 HOH HOH A . F 4 HOH 4 304 209 HOH HOH A . F 4 HOH 5 305 210 HOH HOH A . F 4 HOH 6 306 211 HOH HOH A . F 4 HOH 7 307 212 HOH HOH A . F 4 HOH 8 308 213 HOH HOH A . F 4 HOH 9 309 215 HOH HOH A . F 4 HOH 10 310 218 HOH HOH A . F 4 HOH 11 311 220 HOH HOH A . F 4 HOH 12 312 222 HOH HOH A . F 4 HOH 13 313 223 HOH HOH A . F 4 HOH 14 314 224 HOH HOH A . F 4 HOH 15 315 235 HOH HOH A . F 4 HOH 16 316 237 HOH HOH A . F 4 HOH 17 317 239 HOH HOH A . F 4 HOH 18 318 240 HOH HOH A . F 4 HOH 19 319 243 HOH HOH A . F 4 HOH 20 320 246 HOH HOH A . F 4 HOH 21 321 251 HOH HOH A . F 4 HOH 22 322 252 HOH HOH A . F 4 HOH 23 323 253 HOH HOH A . F 4 HOH 24 324 254 HOH HOH A . F 4 HOH 25 325 257 HOH HOH A . F 4 HOH 26 326 260 HOH HOH A . F 4 HOH 27 327 265 HOH HOH A . F 4 HOH 28 328 266 HOH HOH A . F 4 HOH 29 329 268 HOH HOH A . F 4 HOH 30 330 270 HOH HOH A . F 4 HOH 31 331 273 HOH HOH A . F 4 HOH 32 332 274 HOH HOH A . F 4 HOH 33 333 275 HOH HOH A . F 4 HOH 34 334 276 HOH HOH A . F 4 HOH 35 335 277 HOH HOH A . F 4 HOH 36 336 279 HOH HOH A . F 4 HOH 37 337 280 HOH HOH A . F 4 HOH 38 338 284 HOH HOH A . F 4 HOH 39 339 287 HOH HOH A . F 4 HOH 40 340 288 HOH HOH A . F 4 HOH 41 341 290 HOH HOH A . F 4 HOH 42 342 291 HOH HOH A . F 4 HOH 43 343 294 HOH HOH A . F 4 HOH 44 344 298 HOH HOH A . F 4 HOH 45 345 299 HOH HOH A . F 4 HOH 46 346 302 HOH HOH A . F 4 HOH 47 347 303 HOH HOH A . F 4 HOH 48 348 304 HOH HOH A . F 4 HOH 49 349 305 HOH HOH A . F 4 HOH 50 350 310 HOH HOH A . F 4 HOH 51 351 311 HOH HOH A . G 4 HOH 1 301 204 HOH HOH B . G 4 HOH 2 302 205 HOH HOH B . G 4 HOH 3 303 208 HOH HOH B . G 4 HOH 4 304 214 HOH HOH B . G 4 HOH 5 305 216 HOH HOH B . G 4 HOH 6 306 217 HOH HOH B . G 4 HOH 7 307 219 HOH HOH B . G 4 HOH 8 308 221 HOH HOH B . G 4 HOH 9 309 225 HOH HOH B . G 4 HOH 10 310 226 HOH HOH B . G 4 HOH 11 311 227 HOH HOH B . G 4 HOH 12 312 228 HOH HOH B . G 4 HOH 13 313 229 HOH HOH B . G 4 HOH 14 314 230 HOH HOH B . G 4 HOH 15 315 231 HOH HOH B . G 4 HOH 16 316 232 HOH HOH B . G 4 HOH 17 317 233 HOH HOH B . G 4 HOH 18 318 234 HOH HOH B . G 4 HOH 19 319 236 HOH HOH B . G 4 HOH 20 320 238 HOH HOH B . G 4 HOH 21 321 241 HOH HOH B . G 4 HOH 22 322 242 HOH HOH B . G 4 HOH 23 323 244 HOH HOH B . G 4 HOH 24 324 245 HOH HOH B . G 4 HOH 25 325 247 HOH HOH B . G 4 HOH 26 326 248 HOH HOH B . G 4 HOH 27 327 249 HOH HOH B . G 4 HOH 28 328 250 HOH HOH B . G 4 HOH 29 329 255 HOH HOH B . G 4 HOH 30 330 256 HOH HOH B . G 4 HOH 31 331 258 HOH HOH B . G 4 HOH 32 332 259 HOH HOH B . G 4 HOH 33 333 261 HOH HOH B . G 4 HOH 34 334 262 HOH HOH B . G 4 HOH 35 335 263 HOH HOH B . G 4 HOH 36 336 264 HOH HOH B . G 4 HOH 37 337 267 HOH HOH B . G 4 HOH 38 338 269 HOH HOH B . G 4 HOH 39 339 271 HOH HOH B . G 4 HOH 40 340 272 HOH HOH B . G 4 HOH 41 341 278 HOH HOH B . G 4 HOH 42 342 281 HOH HOH B . G 4 HOH 43 343 282 HOH HOH B . G 4 HOH 44 344 283 HOH HOH B . G 4 HOH 45 345 285 HOH HOH B . G 4 HOH 46 346 286 HOH HOH B . G 4 HOH 47 347 289 HOH HOH B . G 4 HOH 48 348 292 HOH HOH B . G 4 HOH 49 349 293 HOH HOH B . G 4 HOH 50 350 295 HOH HOH B . G 4 HOH 51 351 296 HOH HOH B . G 4 HOH 52 352 297 HOH HOH B . G 4 HOH 53 353 300 HOH HOH B . G 4 HOH 54 354 301 HOH HOH B . G 4 HOH 55 355 306 HOH HOH B . G 4 HOH 56 356 307 HOH HOH B . G 4 HOH 57 357 308 HOH HOH B . G 4 HOH 58 358 309 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 29 A MSE 46 ? MET SELENOMETHIONINE 2 A MSE 136 A MSE 153 ? MET SELENOMETHIONINE 3 A MSE 148 A MSE 165 ? MET SELENOMETHIONINE 4 B MSE 29 B MSE 46 ? MET SELENOMETHIONINE 5 B MSE 136 B MSE 153 ? MET SELENOMETHIONINE 6 B MSE 148 B MSE 165 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 9040 ? 1 MORE -47 ? 1 'SSA (A^2)' 24710 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-02-13 2 'Structure model' 1 1 2014-12-24 3 'Structure model' 1 2 2017-11-15 4 'Structure model' 1 3 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' database_2 3 4 'Structure model' struct_conn 4 4 'Structure model' struct_ref_seq_dif 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 5.4498 3.2450 16.1178 -0.0756 -0.2837 -0.0011 0.0620 -0.1011 0.0203 2.2447 3.7067 2.6072 0.0122 0.2290 -0.1810 -0.0953 0.0011 0.0942 0.0608 -0.1334 -0.1527 -0.1562 0.3490 0.1049 'X-RAY DIFFRACTION' 2 ? refined -4.2189 20.7631 16.2740 -0.0759 -0.2987 -0.0494 0.0570 -0.1116 -0.0105 2.6632 5.1265 3.1113 -1.0235 0.3712 0.3007 0.0257 -0.0752 0.0496 0.0389 0.0235 0.0120 -0.3387 -0.2486 -0.1162 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 ? ? ? ? '{ A|42-177 }' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 ? ? ? ? '{ B|42-177 }' ? ? ? ? ? # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 5 XSCALE 'March 15, 2012' ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 6 BUSTER-TNT 2.10.0 ? program 'Gerard Bricogne' buster-develop@GlobalPhasing.com refinement http://www.globalphasing.com/buster/ ? ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 BUSTER 2.10.0 ? ? ? ? refinement ? ? ? # _pdbx_entry_details.entry_id 4ID2 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 19-183 OF THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 131 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -109.83 _pdbx_validate_torsion.psi -64.33 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 47 ? CG ? A GLN 30 CG 2 1 Y 1 A GLN 47 ? CD ? A GLN 30 CD 3 1 Y 1 A GLN 47 ? OE1 ? A GLN 30 OE1 4 1 Y 1 A GLN 47 ? NE2 ? A GLN 30 NE2 5 1 Y 1 A GLU 80 ? CG ? A GLU 63 CG 6 1 Y 1 A GLU 80 ? CD ? A GLU 63 CD 7 1 Y 1 A GLU 80 ? OE1 ? A GLU 63 OE1 8 1 Y 1 A GLU 80 ? OE2 ? A GLU 63 OE2 9 1 Y 1 A LEU 81 ? CG ? A LEU 64 CG 10 1 Y 1 A LEU 81 ? CD1 ? A LEU 64 CD1 11 1 Y 1 A LEU 81 ? CD2 ? A LEU 64 CD2 12 1 Y 1 A ASN 118 ? CG ? A ASN 101 CG 13 1 Y 1 A ASN 118 ? OD1 ? A ASN 101 OD1 14 1 Y 1 A ASN 118 ? ND2 ? A ASN 101 ND2 15 1 Y 1 A PHE 119 ? CG ? A PHE 102 CG 16 1 Y 1 A PHE 119 ? CD1 ? A PHE 102 CD1 17 1 Y 1 A PHE 119 ? CD2 ? A PHE 102 CD2 18 1 Y 1 A PHE 119 ? CE1 ? A PHE 102 CE1 19 1 Y 1 A PHE 119 ? CE2 ? A PHE 102 CE2 20 1 Y 1 A PHE 119 ? CZ ? A PHE 102 CZ 21 1 Y 1 A GLN 148 ? CG ? A GLN 131 CG 22 1 Y 1 A GLN 148 ? CD ? A GLN 131 CD 23 1 Y 1 A GLN 148 ? OE1 ? A GLN 131 OE1 24 1 Y 1 A GLN 148 ? NE2 ? A GLN 131 NE2 25 1 Y 1 A ASP 150 ? CG ? A ASP 133 CG 26 1 Y 1 A ASP 150 ? OD1 ? A ASP 133 OD1 27 1 Y 1 A ASP 150 ? OD2 ? A ASP 133 OD2 28 1 Y 1 B GLU 80 ? CG ? B GLU 63 CG 29 1 Y 1 B GLU 80 ? CD ? B GLU 63 CD 30 1 Y 1 B GLU 80 ? OE1 ? B GLU 63 OE1 31 1 Y 1 B GLU 80 ? OE2 ? B GLU 63 OE2 32 1 Y 1 B LEU 81 ? CG ? B LEU 64 CG 33 1 Y 1 B LEU 81 ? CD1 ? B LEU 64 CD1 34 1 Y 1 B LEU 81 ? CD2 ? B LEU 64 CD2 35 1 Y 1 B ASP 83 ? CG ? B ASP 66 CG 36 1 Y 1 B ASP 83 ? OD1 ? B ASP 66 OD1 37 1 Y 1 B ASP 83 ? OD2 ? B ASP 66 OD2 38 1 Y 1 B ASN 118 ? CG ? B ASN 101 CG 39 1 Y 1 B ASN 118 ? OD1 ? B ASN 101 OD1 40 1 Y 1 B ASN 118 ? ND2 ? B ASN 101 ND2 41 1 Y 1 B GLN 148 ? CG ? B GLN 131 CG 42 1 Y 1 B GLN 148 ? CD ? B GLN 131 CD 43 1 Y 1 B GLN 148 ? OE1 ? B GLN 131 OE1 44 1 Y 1 B GLN 148 ? NE2 ? B GLN 131 NE2 45 1 Y 1 B ASP 176 ? CG ? B ASP 159 CG 46 1 Y 1 B ASP 176 ? OD1 ? B ASP 159 OD1 47 1 Y 1 B ASP 176 ? OD2 ? B ASP 159 OD2 48 1 Y 1 B TYR 177 ? CG ? B TYR 160 CG 49 1 Y 1 B TYR 177 ? CD1 ? B TYR 160 CD1 50 1 Y 1 B TYR 177 ? CD2 ? B TYR 160 CD2 51 1 Y 1 B TYR 177 ? CE1 ? B TYR 160 CE1 52 1 Y 1 B TYR 177 ? CE2 ? B TYR 160 CE2 53 1 Y 1 B TYR 177 ? CZ ? B TYR 160 CZ 54 1 Y 1 B TYR 177 ? OH ? B TYR 160 OH # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 18 ? A GLY 1 2 1 Y 1 A CYS 19 ? A CYS 2 3 1 Y 1 A GLY 20 ? A GLY 3 4 1 Y 1 A GLY 21 ? A GLY 4 5 1 Y 1 A LYS 22 ? A LYS 5 6 1 Y 1 A LYS 23 ? A LYS 6 7 1 Y 1 A GLY 24 ? A GLY 7 8 1 Y 1 A SER 25 ? A SER 8 9 1 Y 1 A SER 26 ? A SER 9 10 1 Y 1 A ASP 27 ? A ASP 10 11 1 Y 1 A ASN 28 ? A ASN 11 12 1 Y 1 A THR 29 ? A THR 12 13 1 Y 1 A SER 30 ? A SER 13 14 1 Y 1 A THR 31 ? A THR 14 15 1 Y 1 A LEU 32 ? A LEU 15 16 1 Y 1 A ALA 33 ? A ALA 16 17 1 Y 1 A MSE 34 ? A MSE 17 18 1 Y 1 A ILE 35 ? A ILE 18 19 1 Y 1 A ASP 36 ? A ASP 19 20 1 Y 1 A SER 37 ? A SER 20 21 1 Y 1 A VAL 38 ? A VAL 21 22 1 Y 1 A ASP 39 ? A ASP 22 23 1 Y 1 A ALA 40 ? A ALA 23 24 1 Y 1 A HIS 41 ? A HIS 24 25 1 Y 1 A ASP 178 ? A ASP 161 26 1 Y 1 A ASP 179 ? A ASP 162 27 1 Y 1 A GLU 180 ? A GLU 163 28 1 Y 1 A ALA 181 ? A ALA 164 29 1 Y 1 A PRO 182 ? A PRO 165 30 1 Y 1 A ASN 183 ? A ASN 166 31 1 Y 1 B GLY 18 ? B GLY 1 32 1 Y 1 B CYS 19 ? B CYS 2 33 1 Y 1 B GLY 20 ? B GLY 3 34 1 Y 1 B GLY 21 ? B GLY 4 35 1 Y 1 B LYS 22 ? B LYS 5 36 1 Y 1 B LYS 23 ? B LYS 6 37 1 Y 1 B GLY 24 ? B GLY 7 38 1 Y 1 B SER 25 ? B SER 8 39 1 Y 1 B SER 26 ? B SER 9 40 1 Y 1 B ASP 27 ? B ASP 10 41 1 Y 1 B ASN 28 ? B ASN 11 42 1 Y 1 B THR 29 ? B THR 12 43 1 Y 1 B SER 30 ? B SER 13 44 1 Y 1 B THR 31 ? B THR 14 45 1 Y 1 B LEU 32 ? B LEU 15 46 1 Y 1 B ALA 33 ? B ALA 16 47 1 Y 1 B MSE 34 ? B MSE 17 48 1 Y 1 B ILE 35 ? B ILE 18 49 1 Y 1 B ASP 36 ? B ASP 19 50 1 Y 1 B SER 37 ? B SER 20 51 1 Y 1 B VAL 38 ? B VAL 21 52 1 Y 1 B ASP 39 ? B ASP 22 53 1 Y 1 B ALA 40 ? B ALA 23 54 1 Y 1 B HIS 41 ? B HIS 24 55 1 Y 1 B ASP 178 ? B ASP 161 56 1 Y 1 B ASP 179 ? B ASP 162 57 1 Y 1 B GLU 180 ? B GLU 163 58 1 Y 1 B ALA 181 ? B ALA 164 59 1 Y 1 B PRO 182 ? B PRO 165 60 1 Y 1 B ASN 183 ? B ASN 166 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 1,2-ETHANEDIOL EDO 4 water HOH #