HEADER OXIDOREDUCTASE 12-DEC-12 4IDA TITLE STRUCTURE OF THE FRAGARIA X ANANASSA ENONE OXIDOREDUCTASE IN ITS APO TITLE 2 FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIPENING-INDUCED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 17-336; COMPND 5 SYNONYM: FAEO; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FRAGARIA VESCA; SOURCE 3 ORGANISM_COMMON: WOODLAND STRAWBERRY; SOURCE 4 ORGANISM_TAXID: 57918; SOURCE 5 GENE: GENE28406; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: JM83; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PASK-IBA5PLUS KEYWDS MEDIUM CHAIN DEHYDROGENASE/REDUCTASE FAMILY, ZINC-INDEPENDENT, KEYWDS 2 ROSSMANN FOLD, ENONE OXIDOREDUCTASE, FURANEOL, HYDRIDE TRANSFER, KEYWDS 3 NADPH, NADH, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.SCHIEFNER,A.SKERRA REVDAT 3 08-NOV-23 4IDA 1 REMARK SEQADV REVDAT 2 05-MAR-14 4IDA 1 JRNL REVDAT 1 17-APR-13 4IDA 0 JRNL AUTH A.SCHIEFNER,Q.SINZ,I.NEUMAIER,W.SCHWAB,A.SKERRA JRNL TITL STRUCTURAL BASIS FOR THE ENZYMATIC FORMATION OF THE KEY JRNL TITL 2 STRAWBERRY FLAVOR COMPOUND JRNL TITL 3 4-HYDROXY-2,5-DIMETHYL-3(2H)-FURANONE JRNL REF J.BIOL.CHEM. V. 288 16815 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 23589283 JRNL DOI 10.1074/JBC.M113.453852 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 58211 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.155 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.173 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1771 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4087 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.98 REMARK 3 BIN R VALUE (WORKING SET) : 0.2350 REMARK 3 BIN FREE R VALUE SET COUNT : 119 REMARK 3 BIN FREE R VALUE : 0.2200 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2405 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 306 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.68 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.53000 REMARK 3 B22 (A**2) : 0.53000 REMARK 3 B33 (A**2) : -1.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.062 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.062 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.041 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.276 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.964 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2534 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2498 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3456 ; 1.991 ; 2.001 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5801 ; 0.923 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 336 ; 6.654 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 87 ;36.247 ;25.057 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 426 ;11.534 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;19.545 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 409 ; 0.125 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2821 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 486 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 8 REMARK 3 ORIGIN FOR THE GROUP (A): -33.6097 7.4974 28.9130 REMARK 3 T TENSOR REMARK 3 T11: 0.3248 T22: 0.5845 REMARK 3 T33: 0.4480 T12: 0.0652 REMARK 3 T13: 0.0221 T23: 0.0799 REMARK 3 L TENSOR REMARK 3 L11: 22.4668 L22: 3.6010 REMARK 3 L33: 4.9432 L12: 1.4061 REMARK 3 L13: -5.0998 L23: -3.9658 REMARK 3 S TENSOR REMARK 3 S11: 0.1141 S12: -1.0875 S13: 0.4709 REMARK 3 S21: -0.0807 S22: 0.4466 S23: 0.4795 REMARK 3 S31: 0.0721 S32: -0.2857 S33: -0.5607 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 9 A 133 REMARK 3 ORIGIN FOR THE GROUP (A): -29.9988 20.5194 12.3114 REMARK 3 T TENSOR REMARK 3 T11: 0.0054 T22: 0.1234 REMARK 3 T33: 0.0613 T12: -0.0046 REMARK 3 T13: -0.0154 T23: 0.0207 REMARK 3 L TENSOR REMARK 3 L11: 1.3932 L22: 2.4566 REMARK 3 L33: 1.5686 L12: -0.3934 REMARK 3 L13: 0.5340 L23: -0.4850 REMARK 3 S TENSOR REMARK 3 S11: -0.0120 S12: -0.1855 S13: 0.0498 REMARK 3 S21: -0.0081 S22: -0.0018 S23: 0.0391 REMARK 3 S31: -0.0451 S32: 0.0482 S33: 0.0138 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 134 A 164 REMARK 3 ORIGIN FOR THE GROUP (A): -34.1752 11.6457 -5.0138 REMARK 3 T TENSOR REMARK 3 T11: 0.1714 T22: 0.0463 REMARK 3 T33: 0.1283 T12: 0.0112 REMARK 3 T13: -0.0643 T23: 0.0099 REMARK 3 L TENSOR REMARK 3 L11: 1.0371 L22: 0.0454 REMARK 3 L33: 4.5599 L12: 0.0912 REMARK 3 L13: 1.7512 L23: 0.0423 REMARK 3 S TENSOR REMARK 3 S11: 0.0938 S12: -0.0601 S13: -0.1923 REMARK 3 S21: -0.0703 S22: -0.0100 S23: 0.0071 REMARK 3 S31: 0.3939 S32: -0.0208 S33: -0.0838 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 165 A 222 REMARK 3 ORIGIN FOR THE GROUP (A): -26.5680 14.2830 -18.6594 REMARK 3 T TENSOR REMARK 3 T11: 0.1499 T22: 0.2282 REMARK 3 T33: 0.1588 T12: 0.0263 REMARK 3 T13: 0.0004 T23: -0.0509 REMARK 3 L TENSOR REMARK 3 L11: 2.9323 L22: 3.2803 REMARK 3 L33: 3.1187 L12: 0.3800 REMARK 3 L13: 0.5264 L23: -0.1559 REMARK 3 S TENSOR REMARK 3 S11: -0.0381 S12: 0.3218 S13: -0.0651 REMARK 3 S21: -0.2900 S22: 0.0797 S23: -0.5319 REMARK 3 S31: 0.1998 S32: 0.6241 S33: -0.0416 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 223 A 287 REMARK 3 ORIGIN FOR THE GROUP (A): -35.7128 18.6692 -13.5470 REMARK 3 T TENSOR REMARK 3 T11: 0.0949 T22: 0.0944 REMARK 3 T33: 0.0928 T12: -0.0146 REMARK 3 T13: -0.0353 T23: -0.0127 REMARK 3 L TENSOR REMARK 3 L11: 0.9450 L22: 1.3281 REMARK 3 L33: 3.6860 L12: -0.2451 REMARK 3 L13: 0.7775 L23: -0.4941 REMARK 3 S TENSOR REMARK 3 S11: 0.0108 S12: 0.1385 S13: -0.0515 REMARK 3 S21: -0.2565 S22: 0.0476 S23: -0.1058 REMARK 3 S31: 0.0764 S32: 0.1786 S33: -0.0583 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 288 A 321 REMARK 3 ORIGIN FOR THE GROUP (A): -16.2065 17.0011 2.8611 REMARK 3 T TENSOR REMARK 3 T11: 0.0425 T22: 0.2410 REMARK 3 T33: 0.1286 T12: 0.0287 REMARK 3 T13: 0.0348 T23: 0.0468 REMARK 3 L TENSOR REMARK 3 L11: 2.6587 L22: 4.9806 REMARK 3 L33: 2.6985 L12: -0.6059 REMARK 3 L13: -0.1365 L23: 1.0834 REMARK 3 S TENSOR REMARK 3 S11: 0.0638 S12: 0.2477 S13: 0.1150 REMARK 3 S21: -0.4431 S22: -0.0357 S23: -0.2881 REMARK 3 S31: -0.0390 S32: 0.4642 S33: -0.0282 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES: WITH TLS ADDED REMARK 4 REMARK 4 4IDA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-DEC-12. REMARK 100 THE DEPOSITION ID IS D_1000076607. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91841 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58211 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.640 REMARK 200 R MERGE (I) : 0.04700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.2400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.81300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.970 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4IDC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28-25 % (W/V) PEG3350, 0.2M LI2SO4, REMARK 280 0.1M CITRATE/NAOH PH 5.5-6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K, PH 6.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.44100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 35.18800 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 35.18800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 129.66150 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 35.18800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 35.18800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 43.22050 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 35.18800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.18800 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 129.66150 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 35.18800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.18800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 43.22050 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 86.44100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -10 REMARK 465 ALA A -9 REMARK 465 SER A -8 REMARK 465 TRP A -7 REMARK 465 SER A -6 REMARK 465 HIS A -5 REMARK 465 PRO A -4 REMARK 465 GLN A -3 REMARK 465 PHE A -2 REMARK 465 GLU A -1 REMARK 465 LYS A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 41 CG GLU A 41 CD 0.104 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 41 OE1 - CD - OE2 ANGL. DEV. = -7.4 DEGREES REMARK 500 ASP A 103 CB - CG - OD1 ANGL. DEV. = 6.4 DEGREES REMARK 500 ARG A 127 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 405 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IDB RELATED DB: PDB REMARK 900 RELATED ID: 4IDC RELATED DB: PDB REMARK 900 RELATED ID: 4IDD RELATED DB: PDB REMARK 900 RELATED ID: 4IDE RELATED DB: PDB REMARK 900 RELATED ID: 4IDF RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 NATURAL VARIANT AT THIS POSITION DBREF 4IDA A 2 321 UNP O23939 O23939_FRAVE 17 336 SEQADV 4IDA MET A -10 UNP O23939 EXPRESSION TAG SEQADV 4IDA ALA A -9 UNP O23939 EXPRESSION TAG SEQADV 4IDA SER A -8 UNP O23939 EXPRESSION TAG SEQADV 4IDA TRP A -7 UNP O23939 EXPRESSION TAG SEQADV 4IDA SER A -6 UNP O23939 EXPRESSION TAG SEQADV 4IDA HIS A -5 UNP O23939 EXPRESSION TAG SEQADV 4IDA PRO A -4 UNP O23939 EXPRESSION TAG SEQADV 4IDA GLN A -3 UNP O23939 EXPRESSION TAG SEQADV 4IDA PHE A -2 UNP O23939 EXPRESSION TAG SEQADV 4IDA GLU A -1 UNP O23939 EXPRESSION TAG SEQADV 4IDA LYS A 0 UNP O23939 EXPRESSION TAG SEQADV 4IDA GLY A 1 UNP O23939 EXPRESSION TAG SEQADV 4IDA ASP A 79 UNP O23939 TYR 94 SEE REMARK 999 SEQRES 1 A 332 MET ALA SER TRP SER HIS PRO GLN PHE GLU LYS GLY ALA SEQRES 2 A 332 ALA ALA PRO SER GLU SER ILE PRO SER VAL ASN LYS ALA SEQRES 3 A 332 TRP VAL TYR SER GLU TYR GLY LYS THR SER ASP VAL LEU SEQRES 4 A 332 LYS PHE ASP PRO SER VAL ALA VAL PRO GLU ILE LYS GLU SEQRES 5 A 332 ASP GLN VAL LEU ILE LYS VAL VAL ALA ALA SER LEU ASN SEQRES 6 A 332 PRO VAL ASP PHE LYS ARG ALA LEU GLY TYR PHE LYS ASP SEQRES 7 A 332 THR ASP SER PRO LEU PRO THR ILE PRO GLY TYR ASP VAL SEQRES 8 A 332 ALA GLY VAL VAL VAL LYS VAL GLY SER GLN VAL THR LYS SEQRES 9 A 332 PHE LYS VAL GLY ASP GLU VAL TYR GLY ASP LEU ASN GLU SEQRES 10 A 332 THR ALA LEU VAL ASN PRO THR ARG PHE GLY SER LEU ALA SEQRES 11 A 332 GLU TYR THR ALA ALA ASP GLU ARG VAL LEU ALA HIS LYS SEQRES 12 A 332 PRO LYS ASN LEU SER PHE ILE GLU ALA ALA SER LEU PRO SEQRES 13 A 332 LEU ALA ILE GLU THR ALA HIS GLU GLY LEU GLU ARG ALA SEQRES 14 A 332 GLU LEU SER ALA GLY LYS SER VAL LEU VAL LEU GLY GLY SEQRES 15 A 332 ALA GLY GLY VAL GLY THR HIS ILE ILE GLN LEU ALA LYS SEQRES 16 A 332 HIS VAL PHE GLY ALA SER LYS VAL ALA ALA THR ALA SER SEQRES 17 A 332 THR LYS LYS LEU ASP LEU LEU ARG THR LEU GLY ALA ASP SEQRES 18 A 332 LEU ALA ILE ASP TYR THR LYS GLU ASN PHE GLU ASP LEU SEQRES 19 A 332 PRO GLU LYS PHE ASP VAL VAL TYR ASP ALA VAL GLY GLU SEQRES 20 A 332 THR ASP LYS ALA VAL LYS ALA VAL LYS GLU GLY GLY LYS SEQRES 21 A 332 VAL VAL THR ILE VAL GLY PRO ALA THR PRO PRO ALA ILE SEQRES 22 A 332 LEU PHE VAL LEU THR SER LYS GLY SER VAL LEU GLU LYS SEQRES 23 A 332 LEU LYS PRO TYR LEU GLU SER GLY LYS VAL LYS PRO VAL SEQRES 24 A 332 LEU ASP PRO THR SER PRO TYR PRO PHE THR LYS VAL VAL SEQRES 25 A 332 GLU ALA PHE GLY TYR LEU GLU SER SER ARG ALA THR GLY SEQRES 26 A 332 LYS VAL VAL VAL TYR PRO ILE HET SO4 A 401 5 HET SO4 A 402 5 HET EDO A 403 4 HET EDO A 404 4 HET EDO A 405 4 HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 SO4 2(O4 S 2-) FORMUL 4 EDO 3(C2 H6 O2) FORMUL 7 HOH *306(H2 O) HELIX 1 1 PRO A 5 ILE A 9 5 5 HELIX 2 2 LYS A 23 LEU A 28 1 6 HELIX 3 3 ASN A 54 LEU A 62 1 9 HELIX 4 4 PHE A 65 ASP A 69 5 5 HELIX 5 5 SER A 137 SER A 143 1 7 HELIX 6 6 LEU A 144 ALA A 158 1 15 HELIX 7 7 GLY A 173 VAL A 186 1 14 HELIX 8 8 SER A 197 LYS A 199 5 3 HELIX 9 9 LYS A 200 GLY A 208 1 9 HELIX 10 10 ASN A 219 LEU A 223 5 5 HELIX 11 11 GLU A 236 VAL A 241 1 6 HELIX 12 12 LYS A 269 SER A 282 1 14 HELIX 13 13 PRO A 296 THR A 298 5 3 HELIX 14 14 LYS A 299 SER A 309 1 11 SHEET 1 A 2 VAL A 12 VAL A 17 0 SHEET 2 A 2 LYS A 29 ALA A 35 -1 O VAL A 34 N ASN A 13 SHEET 1 B 5 TYR A 121 ASP A 125 0 SHEET 2 B 5 GLN A 43 SER A 52 -1 N ILE A 46 O THR A 122 SHEET 3 B 5 ASP A 79 VAL A 87 -1 O VAL A 85 N LEU A 45 SHEET 4 B 5 GLU A 99 ASP A 103 -1 O VAL A 100 N GLY A 82 SHEET 5 B 5 LEU A 129 HIS A 131 -1 O ALA A 130 N TYR A 101 SHEET 1 C 3 TYR A 121 ASP A 125 0 SHEET 2 C 3 GLN A 43 SER A 52 -1 N ILE A 46 O THR A 122 SHEET 3 C 3 VAL A 317 VAL A 318 -1 O VAL A 318 N ALA A 51 SHEET 1 D 6 LEU A 211 ASP A 214 0 SHEET 2 D 6 LYS A 191 ALA A 196 1 N ALA A 194 O ILE A 213 SHEET 3 D 6 SER A 165 LEU A 169 1 N VAL A 166 O ALA A 193 SHEET 4 D 6 PHE A 227 ASP A 232 1 O TYR A 231 N LEU A 167 SHEET 5 D 6 VAL A 244 THR A 252 1 O VAL A 251 N ASP A 232 SHEET 6 D 6 ILE A 262 LEU A 263 1 O ILE A 262 N THR A 252 CISPEP 1 LEU A 72 PRO A 73 0 -5.68 CISPEP 2 GLY A 255 PRO A 256 0 -2.94 CISPEP 3 PRO A 259 PRO A 260 0 12.00 CISPEP 4 SER A 293 PRO A 294 0 1.08 CISPEP 5 TYR A 319 PRO A 320 0 -5.23 SITE 1 AC1 4 ARG A 127 SER A 271 HOH A 547 HOH A 721 SITE 1 AC2 6 ALA A 196 SER A 197 LYS A 200 TYR A 215 SITE 2 AC2 6 HOH A 549 HOH A 796 SITE 1 AC3 5 ASP A 228 LYS A 245 HOH A 569 HOH A 606 SITE 2 AC3 5 HOH A 695 SITE 1 AC4 5 SER A 137 PHE A 138 ILE A 139 HOH A 684 SITE 2 AC4 5 HOH A 702 SITE 1 AC5 6 ALA A 108 LEU A 146 HOH A 517 HOH A 532 SITE 2 AC5 6 HOH A 616 HOH A 719 CRYST1 70.376 70.376 172.882 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014209 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014209 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005784 0.00000