HEADER OXIDOREDUCTASE 12-DEC-12 4IDE TITLE STRUCTURE OF THE FRAGARIA X ANANASSA ENONE OXIDOREDUCTASE IN COMPLEX TITLE 2 WITH NADP+ AND EDHMF COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIPENING-INDUCED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 17-336; COMPND 5 SYNONYM: FAEO; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FRAGARIA VESCA; SOURCE 3 ORGANISM_COMMON: WOODLAND STRAWBERRY; SOURCE 4 ORGANISM_TAXID: 57918; SOURCE 5 GENE: GENE28406; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: JM83; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PASK-IBA5PLUS KEYWDS MEDIUM CHAIN DEHYDROGENASE/REDUCTASE FAMILY, ZINC-INDEPENDENT, KEYWDS 2 ROSSMANN FOLD, ENONE OXIDOREDUCTASE, FURANEOL, HYDRIDE TRANSFER, KEYWDS 3 NADPH, NADH, EDHMF, (2E)-ETHYLIDENE-4-HYDROXY-5-METHYL-3(2H)- KEYWDS 4 FURANONE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.SCHIEFNER,A.SKERRA REVDAT 4 08-NOV-23 4IDE 1 REMARK SEQADV REVDAT 3 15-NOV-17 4IDE 1 REMARK REVDAT 2 05-MAR-14 4IDE 1 JRNL REVDAT 1 17-APR-13 4IDE 0 JRNL AUTH A.SCHIEFNER,Q.SINZ,I.NEUMAIER,W.SCHWAB,A.SKERRA JRNL TITL STRUCTURAL BASIS FOR THE ENZYMATIC FORMATION OF THE KEY JRNL TITL 2 STRAWBERRY FLAVOR COMPOUND JRNL TITL 3 4-HYDROXY-2,5-DIMETHYL-3(2H)-FURANONE JRNL REF J.BIOL.CHEM. V. 288 16815 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 23589283 JRNL DOI 10.1074/JBC.M113.453852 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 58034 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1763 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4093 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.98 REMARK 3 BIN R VALUE (WORKING SET) : 0.2110 REMARK 3 BIN FREE R VALUE SET COUNT : 113 REMARK 3 BIN FREE R VALUE : 0.2760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2405 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 71 REMARK 3 SOLVENT ATOMS : 376 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.27000 REMARK 3 B22 (A**2) : 0.27000 REMARK 3 B33 (A**2) : -0.54000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.062 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.066 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.042 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.247 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.964 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2558 ; 0.019 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2494 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3496 ; 2.071 ; 2.024 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5787 ; 0.898 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 329 ; 6.745 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 84 ;35.775 ;25.119 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 416 ;11.913 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;19.322 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 414 ; 0.125 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2805 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 493 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 41 REMARK 3 ORIGIN FOR THE GROUP (A): -25.7212 22.1491 18.6267 REMARK 3 T TENSOR REMARK 3 T11: 0.0458 T22: 0.1422 REMARK 3 T33: 0.0548 T12: -0.0159 REMARK 3 T13: -0.0197 T23: -0.0245 REMARK 3 L TENSOR REMARK 3 L11: 2.1107 L22: 2.6639 REMARK 3 L33: 2.4306 L12: -0.9025 REMARK 3 L13: 0.9241 L23: -0.3770 REMARK 3 S TENSOR REMARK 3 S11: -0.0372 S12: -0.3782 S13: 0.0570 REMARK 3 S21: 0.2877 S22: 0.0382 S23: -0.0461 REMARK 3 S31: -0.1217 S32: 0.1428 S33: -0.0010 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 42 A 149 REMARK 3 ORIGIN FOR THE GROUP (A): -32.4321 16.8955 9.6094 REMARK 3 T TENSOR REMARK 3 T11: 0.0160 T22: 0.0617 REMARK 3 T33: 0.0166 T12: -0.0085 REMARK 3 T13: -0.0149 T23: 0.0187 REMARK 3 L TENSOR REMARK 3 L11: 1.4990 L22: 2.0118 REMARK 3 L33: 2.0767 L12: -0.7464 REMARK 3 L13: 0.4214 L23: -0.6064 REMARK 3 S TENSOR REMARK 3 S11: 0.0790 S12: -0.1570 S13: -0.0764 REMARK 3 S21: -0.1714 S22: 0.0087 S23: 0.1394 REMARK 3 S31: 0.0791 S32: -0.0163 S33: -0.0878 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 150 A 222 REMARK 3 ORIGIN FOR THE GROUP (A): -29.3682 13.3427 -16.7137 REMARK 3 T TENSOR REMARK 3 T11: 0.1246 T22: 0.1152 REMARK 3 T33: 0.0515 T12: 0.0358 REMARK 3 T13: -0.0109 T23: -0.0393 REMARK 3 L TENSOR REMARK 3 L11: 2.4361 L22: 1.6313 REMARK 3 L33: 3.1877 L12: -0.0276 REMARK 3 L13: 0.9278 L23: 0.3673 REMARK 3 S TENSOR REMARK 3 S11: 0.0381 S12: 0.2532 S13: -0.1200 REMARK 3 S21: -0.2107 S22: 0.0725 S23: -0.2058 REMARK 3 S31: 0.1739 S32: 0.5229 S33: -0.1106 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 223 A 279 REMARK 3 ORIGIN FOR THE GROUP (A): -36.3625 20.1211 -14.2842 REMARK 3 T TENSOR REMARK 3 T11: 0.0738 T22: 0.0498 REMARK 3 T33: 0.0366 T12: -0.0033 REMARK 3 T13: -0.0077 T23: -0.0200 REMARK 3 L TENSOR REMARK 3 L11: 1.0641 L22: 1.7406 REMARK 3 L33: 4.4282 L12: -0.2536 REMARK 3 L13: 0.8821 L23: -0.0247 REMARK 3 S TENSOR REMARK 3 S11: 0.0391 S12: 0.1517 S13: -0.0036 REMARK 3 S21: -0.2384 S22: 0.0754 S23: -0.1245 REMARK 3 S31: -0.1543 S32: 0.2306 S33: -0.1145 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 280 A 286 REMARK 3 ORIGIN FOR THE GROUP (A): -32.0065 0.8923 -5.3589 REMARK 3 T TENSOR REMARK 3 T11: 0.2171 T22: 0.0569 REMARK 3 T33: 0.1487 T12: 0.0458 REMARK 3 T13: -0.1022 T23: -0.0165 REMARK 3 L TENSOR REMARK 3 L11: 11.1285 L22: 20.5713 REMARK 3 L33: 13.2728 L12: 6.1286 REMARK 3 L13: -4.9786 L23: 2.3363 REMARK 3 S TENSOR REMARK 3 S11: -0.2634 S12: 0.3710 S13: -0.6571 REMARK 3 S21: -0.8701 S22: 0.2824 S23: 0.3028 REMARK 3 S31: 0.5369 S32: -0.0136 S33: -0.0190 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 287 A 321 REMARK 3 ORIGIN FOR THE GROUP (A): -17.6703 15.9902 2.5902 REMARK 3 T TENSOR REMARK 3 T11: 0.0349 T22: 0.1663 REMARK 3 T33: 0.0637 T12: 0.0235 REMARK 3 T13: 0.0308 T23: 0.0293 REMARK 3 L TENSOR REMARK 3 L11: 1.5404 L22: 2.6531 REMARK 3 L33: 1.8825 L12: 0.0948 REMARK 3 L13: 0.4384 L23: -0.2955 REMARK 3 S TENSOR REMARK 3 S11: 0.0597 S12: 0.1447 S13: 0.0878 REMARK 3 S21: -0.2509 S22: -0.0347 S23: -0.2016 REMARK 3 S31: 0.0605 S32: 0.4133 S33: -0.0250 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES: WITH TLS ADDED REMARK 4 REMARK 4 4IDE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-DEC-12. REMARK 100 THE DEPOSITION ID IS D_1000076611. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91841 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58034 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 8.050 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.4300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.80500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.370 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4IDC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 21-16% (W/V) PEG3350, 0.2M LI2SO4, REMARK 280 0.1M TRIS/HCL PH 7.0-8.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K, PH 8.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 87.25550 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 34.98100 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 34.98100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 130.88325 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 34.98100 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 34.98100 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 43.62775 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 34.98100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.98100 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 130.88325 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 34.98100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.98100 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 43.62775 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 87.25550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -10 REMARK 465 ALA A -9 REMARK 465 SER A -8 REMARK 465 TRP A -7 REMARK 465 SER A -6 REMARK 465 HIS A -5 REMARK 465 PRO A -4 REMARK 465 GLN A -3 REMARK 465 PHE A -2 REMARK 465 GLU A -1 REMARK 465 LYS A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 69 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP A 103 CB - CG - OD1 ANGL. DEV. = 7.0 DEGREES REMARK 500 ARG A 205 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 33 74.54 -151.74 REMARK 500 SER A 33 83.27 -154.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3XX A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 405 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IDA RELATED DB: PDB REMARK 900 RELATED ID: 4IDB RELATED DB: PDB REMARK 900 RELATED ID: 4IDC RELATED DB: PDB REMARK 900 RELATED ID: 4IDD RELATED DB: PDB REMARK 900 RELATED ID: 4IDF RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 NATURAL VARIANT AT THIS POSITION DBREF 4IDE A 2 321 UNP O23939 O23939_FRAVE 17 336 SEQADV 4IDE MET A -10 UNP O23939 EXPRESSION TAG SEQADV 4IDE ALA A -9 UNP O23939 EXPRESSION TAG SEQADV 4IDE SER A -8 UNP O23939 EXPRESSION TAG SEQADV 4IDE TRP A -7 UNP O23939 EXPRESSION TAG SEQADV 4IDE SER A -6 UNP O23939 EXPRESSION TAG SEQADV 4IDE HIS A -5 UNP O23939 EXPRESSION TAG SEQADV 4IDE PRO A -4 UNP O23939 EXPRESSION TAG SEQADV 4IDE GLN A -3 UNP O23939 EXPRESSION TAG SEQADV 4IDE PHE A -2 UNP O23939 EXPRESSION TAG SEQADV 4IDE GLU A -1 UNP O23939 EXPRESSION TAG SEQADV 4IDE LYS A 0 UNP O23939 EXPRESSION TAG SEQADV 4IDE GLY A 1 UNP O23939 EXPRESSION TAG SEQADV 4IDE ASP A 79 UNP O23939 TYR 94 SEE REMARK 999 SEQRES 1 A 332 MET ALA SER TRP SER HIS PRO GLN PHE GLU LYS GLY ALA SEQRES 2 A 332 ALA ALA PRO SER GLU SER ILE PRO SER VAL ASN LYS ALA SEQRES 3 A 332 TRP VAL TYR SER GLU TYR GLY LYS THR SER ASP VAL LEU SEQRES 4 A 332 LYS PHE ASP PRO SER VAL ALA VAL PRO GLU ILE LYS GLU SEQRES 5 A 332 ASP GLN VAL LEU ILE LYS VAL VAL ALA ALA SER LEU ASN SEQRES 6 A 332 PRO VAL ASP PHE LYS ARG ALA LEU GLY TYR PHE LYS ASP SEQRES 7 A 332 THR ASP SER PRO LEU PRO THR ILE PRO GLY TYR ASP VAL SEQRES 8 A 332 ALA GLY VAL VAL VAL LYS VAL GLY SER GLN VAL THR LYS SEQRES 9 A 332 PHE LYS VAL GLY ASP GLU VAL TYR GLY ASP LEU ASN GLU SEQRES 10 A 332 THR ALA LEU VAL ASN PRO THR ARG PHE GLY SER LEU ALA SEQRES 11 A 332 GLU TYR THR ALA ALA ASP GLU ARG VAL LEU ALA HIS LYS SEQRES 12 A 332 PRO LYS ASN LEU SER PHE ILE GLU ALA ALA SER LEU PRO SEQRES 13 A 332 LEU ALA ILE GLU THR ALA HIS GLU GLY LEU GLU ARG ALA SEQRES 14 A 332 GLU LEU SER ALA GLY LYS SER VAL LEU VAL LEU GLY GLY SEQRES 15 A 332 ALA GLY GLY VAL GLY THR HIS ILE ILE GLN LEU ALA LYS SEQRES 16 A 332 HIS VAL PHE GLY ALA SER LYS VAL ALA ALA THR ALA SER SEQRES 17 A 332 THR LYS LYS LEU ASP LEU LEU ARG THR LEU GLY ALA ASP SEQRES 18 A 332 LEU ALA ILE ASP TYR THR LYS GLU ASN PHE GLU ASP LEU SEQRES 19 A 332 PRO GLU LYS PHE ASP VAL VAL TYR ASP ALA VAL GLY GLU SEQRES 20 A 332 THR ASP LYS ALA VAL LYS ALA VAL LYS GLU GLY GLY LYS SEQRES 21 A 332 VAL VAL THR ILE VAL GLY PRO ALA THR PRO PRO ALA ILE SEQRES 22 A 332 LEU PHE VAL LEU THR SER LYS GLY SER VAL LEU GLU LYS SEQRES 23 A 332 LEU LYS PRO TYR LEU GLU SER GLY LYS VAL LYS PRO VAL SEQRES 24 A 332 LEU ASP PRO THR SER PRO TYR PRO PHE THR LYS VAL VAL SEQRES 25 A 332 GLU ALA PHE GLY TYR LEU GLU SER SER ARG ALA THR GLY SEQRES 26 A 332 LYS VAL VAL VAL TYR PRO ILE HET NAP A 401 48 HET 3XX A 402 10 HET SO4 A 403 5 HET EDO A 404 4 HET EDO A 405 4 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM 3XX (2E)-2-ETHYLIDENE-4-HYDROXY-5-METHYLFURAN-3(2H)-ONE HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 NAP C21 H28 N7 O17 P3 FORMUL 3 3XX C7 H8 O3 FORMUL 4 SO4 O4 S 2- FORMUL 5 EDO 2(C2 H6 O2) FORMUL 7 HOH *376(H2 O) HELIX 1 1 PRO A 5 ILE A 9 5 5 HELIX 2 2 LYS A 23 LEU A 28 1 6 HELIX 3 3 ASN A 54 LEU A 62 1 9 HELIX 4 4 PHE A 65 ASP A 69 5 5 HELIX 5 5 SER A 137 LEU A 144 1 8 HELIX 6 6 LEU A 144 ALA A 158 1 15 HELIX 7 7 VAL A 175 VAL A 186 1 12 HELIX 8 8 SER A 197 LYS A 199 5 3 HELIX 9 9 LYS A 200 GLY A 208 1 9 HELIX 10 10 ASN A 219 LEU A 223 5 5 HELIX 11 11 GLU A 236 VAL A 241 1 6 HELIX 12 12 LYS A 269 SER A 282 1 14 HELIX 13 13 PRO A 296 THR A 298 5 3 HELIX 14 14 LYS A 299 GLU A 308 1 10 SHEET 1 A 2 VAL A 12 VAL A 17 0 SHEET 2 A 2 LYS A 29 ALA A 35 -1 O LYS A 29 N VAL A 17 SHEET 1 B 5 TYR A 121 ASP A 125 0 SHEET 2 B 5 GLN A 43 SER A 52 -1 N ILE A 46 O THR A 122 SHEET 3 B 5 ASP A 79 VAL A 87 -1 O VAL A 83 N LYS A 47 SHEET 4 B 5 GLU A 99 ASP A 103 -1 O VAL A 100 N GLY A 82 SHEET 5 B 5 LEU A 129 HIS A 131 -1 O ALA A 130 N TYR A 101 SHEET 1 C 3 TYR A 121 ASP A 125 0 SHEET 2 C 3 GLN A 43 SER A 52 -1 N ILE A 46 O THR A 122 SHEET 3 C 3 VAL A 317 VAL A 318 -1 O VAL A 318 N ALA A 51 SHEET 1 D 6 LEU A 211 ASP A 214 0 SHEET 2 D 6 LYS A 191 ALA A 196 1 N ALA A 194 O ILE A 213 SHEET 3 D 6 SER A 165 LEU A 169 1 N VAL A 166 O ALA A 193 SHEET 4 D 6 PHE A 227 ASP A 232 1 O TYR A 231 N LEU A 167 SHEET 5 D 6 VAL A 244 THR A 252 1 O VAL A 251 N ASP A 232 SHEET 6 D 6 ILE A 262 LEU A 263 1 O ILE A 262 N THR A 252 CISPEP 1 LEU A 72 PRO A 73 0 -9.46 CISPEP 2 GLY A 255 PRO A 256 0 -7.48 CISPEP 3 PRO A 259 PRO A 260 0 16.96 CISPEP 4 SER A 293 PRO A 294 0 -6.60 CISPEP 5 TYR A 319 PRO A 320 0 -4.54 SITE 1 AC1 36 PRO A 55 LYS A 59 LEU A 146 THR A 150 SITE 2 AC1 36 GLY A 170 ALA A 172 GLY A 173 GLY A 174 SITE 3 AC1 36 VAL A 175 THR A 195 SER A 197 LYS A 200 SITE 4 AC1 36 TYR A 215 ALA A 233 VAL A 234 ILE A 253 SITE 5 AC1 36 VAL A 254 PHE A 264 VAL A 265 LEU A 266 SITE 6 AC1 36 SER A 310 ARG A 311 ALA A 312 3XX A 402 SITE 7 AC1 36 HOH A 502 HOH A 503 HOH A 504 HOH A 506 SITE 8 AC1 36 HOH A 507 HOH A 508 HOH A 546 HOH A 675 SITE 9 AC1 36 HOH A 746 HOH A 807 HOH A 818 HOH A 875 SITE 1 AC2 5 VAL A 56 LYS A 59 LEU A 146 NAP A 401 SITE 2 AC2 5 HOH A 501 SITE 1 AC3 5 ARG A 127 LYS A 269 SER A 271 HOH A 547 SITE 2 AC3 5 HOH A 868 SITE 1 AC4 8 VAL A 49 GLY A 163 SER A 190 ASP A 228 SITE 2 AC4 8 LYS A 245 HOH A 612 HOH A 834 HOH A 857 SITE 1 AC5 5 SER A 137 PHE A 138 ILE A 139 TYR A 319 SITE 2 AC5 5 HOH A 750 CRYST1 69.962 69.962 174.511 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014293 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014293 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005730 0.00000