HEADER PROTEIN BINDING 12-DEC-12 4IDI TITLE CRYSTAL STRUCTURE OF RURM1-RELATED PROTEIN FROM PLASMODIUM YOELII, TITLE 2 PY06420 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ORYZA SATIVA RURM1-RELATED; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM YOELII YOELII; SOURCE 3 ORGANISM_TAXID: 73239; SOURCE 4 GENE: PY06420; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, BETA GRASP, KEYWDS 2 PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR A.K.WERNIMONT,W.TEMPEL,J.LEW,J.WALKER,C.H.ARROWSMITH,A.M.EDWARDS, AUTHOR 2 M.SCHAPIRA,C.BOUNTRA,R.HUI,J.D.ARTZ,STRUCTURAL GENOMICS CONSORTIUM AUTHOR 3 (SGC) REVDAT 1 25-DEC-13 4IDI 0 JRNL AUTH A.K.WERNIMONT,W.TEMPEL,J.LEW,J.WALKER,C.H.ARROWSMITH, JRNL AUTH 2 A.M.EDWARDS,M.SCHAPIRA,C.BOUNTRA,R.HUI,J.D.ARTZ JRNL TITL CRYSTAL STRUCTURE OF RURM1-RELATED PROTEIN FROM PLASMODIUM JRNL TITL 2 YOELII, PY06420 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.20 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 39123 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.227 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1971 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.95 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.79 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2541 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2193 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2396 REMARK 3 BIN R VALUE (WORKING SET) : 0.2175 REMARK 3 BIN FREE R VALUE : 0.2486 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.71 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 145 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3846 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 238 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.56 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.75630 REMARK 3 B22 (A**2) : 0.78440 REMARK 3 B33 (A**2) : -4.54060 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.26380 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.286 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.194 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.935 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4028 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5436 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1491 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 123 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 561 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4028 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 536 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4654 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.07 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.29 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 18.32 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 22.8975 51.9081 94.3765 REMARK 3 T TENSOR REMARK 3 T11: -0.1226 T22: -0.0783 REMARK 3 T33: 0.0218 T12: -0.0056 REMARK 3 T13: 0.0122 T23: 0.0185 REMARK 3 L TENSOR REMARK 3 L11: 2.8882 L22: 2.6376 REMARK 3 L33: 1.5878 L12: -0.6126 REMARK 3 L13: -0.1280 L23: -0.6260 REMARK 3 S TENSOR REMARK 3 S11: -0.0464 S12: -0.0777 S13: -0.1931 REMARK 3 S21: -0.1177 S22: -0.0289 S23: 0.0074 REMARK 3 S31: 0.2155 S32: 0.0435 S33: 0.0752 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 16.1294 81.6081 94.4276 REMARK 3 T TENSOR REMARK 3 T11: -0.1410 T22: -0.0870 REMARK 3 T33: 0.0316 T12: -0.0042 REMARK 3 T13: -0.0038 T23: -0.0153 REMARK 3 L TENSOR REMARK 3 L11: 3.8840 L22: 2.9936 REMARK 3 L33: 1.4797 L12: -0.6734 REMARK 3 L13: 0.0529 L23: 0.7111 REMARK 3 S TENSOR REMARK 3 S11: -0.0624 S12: -0.0559 S13: 0.2765 REMARK 3 S21: -0.1218 S22: 0.0151 S23: -0.0418 REMARK 3 S31: -0.2081 S32: -0.0538 S33: 0.0472 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): 25.5488 62.8727 66.6940 REMARK 3 T TENSOR REMARK 3 T11: -0.0382 T22: -0.1003 REMARK 3 T33: -0.0569 T12: -0.0034 REMARK 3 T13: -0.0025 T23: 0.0091 REMARK 3 L TENSOR REMARK 3 L11: 2.9325 L22: 3.1296 REMARK 3 L33: 1.7042 L12: 0.7981 REMARK 3 L13: -0.1824 L23: -1.0997 REMARK 3 S TENSOR REMARK 3 S11: -0.0094 S12: 0.0425 S13: 0.2535 REMARK 3 S21: 0.1248 S22: -0.0525 S23: 0.0558 REMARK 3 S31: -0.2438 S32: 0.0727 S33: 0.0619 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { D|* } REMARK 3 ORIGIN FOR THE GROUP (A): 18.1913 33.6582 66.6420 REMARK 3 T TENSOR REMARK 3 T11: -0.0500 T22: -0.0905 REMARK 3 T33: -0.0398 T12: 0.0028 REMARK 3 T13: 0.0119 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 3.1572 L22: 2.7731 REMARK 3 L33: 1.4841 L12: 0.6172 REMARK 3 L13: -0.0455 L23: 0.7043 REMARK 3 S TENSOR REMARK 3 S11: -0.0412 S12: 0.0423 S13: -0.2794 REMARK 3 S21: 0.1011 S22: -0.0105 S23: 0.0175 REMARK 3 S31: 0.1645 S32: -0.0633 S33: 0.0516 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4IDI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-DEC-12. REMARK 100 THE RCSB ID CODE IS RCSB076615. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-NOV-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97942 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39268 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.14200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.51000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.140 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25 % PEG 3350, 0.2 M NACL, 0.1 M NA REMARK 280 CACODYLATE, 0.1 UG/ML CHYMOTRYPSIN, PH 5.8, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.36000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE BIOLOGICAL ASSEMBLY IS UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -18 REMARK 465 GLY A -17 REMARK 465 SER A -16 REMARK 465 SER A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 SER A -8 REMARK 465 SER A -7 REMARK 465 GLY A -6 REMARK 465 LEU A -5 REMARK 465 VAL A -4 REMARK 465 PRO A -3 REMARK 465 ARG A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 VAL A 60 REMARK 465 SER A 61 REMARK 465 ALA A 62 REMARK 465 HIS A 123 REMARK 465 GLY A 124 REMARK 465 GLY A 125 REMARK 465 MSE B -18 REMARK 465 GLY B -17 REMARK 465 SER B -16 REMARK 465 SER B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 SER B -8 REMARK 465 SER B -7 REMARK 465 GLY B -6 REMARK 465 LEU B -5 REMARK 465 VAL B -4 REMARK 465 PRO B -3 REMARK 465 ARG B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 ASP B 58 REMARK 465 ILE B 59 REMARK 465 VAL B 60 REMARK 465 SER B 61 REMARK 465 ALA B 62 REMARK 465 HIS B 123 REMARK 465 GLY B 124 REMARK 465 GLY B 125 REMARK 465 MSE C -18 REMARK 465 GLY C -17 REMARK 465 SER C -16 REMARK 465 SER C -15 REMARK 465 HIS C -14 REMARK 465 HIS C -13 REMARK 465 HIS C -12 REMARK 465 HIS C -11 REMARK 465 HIS C -10 REMARK 465 HIS C -9 REMARK 465 SER C -8 REMARK 465 SER C -7 REMARK 465 GLY C -6 REMARK 465 LEU C -5 REMARK 465 VAL C -4 REMARK 465 PRO C -3 REMARK 465 ARG C -2 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 VAL C 60 REMARK 465 SER C 61 REMARK 465 ALA C 62 REMARK 465 HIS C 123 REMARK 465 GLY C 124 REMARK 465 GLY C 125 REMARK 465 MSE D -18 REMARK 465 GLY D -17 REMARK 465 SER D -16 REMARK 465 SER D -15 REMARK 465 HIS D -14 REMARK 465 HIS D -13 REMARK 465 HIS D -12 REMARK 465 HIS D -11 REMARK 465 HIS D -10 REMARK 465 HIS D -9 REMARK 465 SER D -8 REMARK 465 SER D -7 REMARK 465 GLY D -6 REMARK 465 LEU D -5 REMARK 465 VAL D -4 REMARK 465 PRO D -3 REMARK 465 ARG D -2 REMARK 465 GLY D -1 REMARK 465 SER D 0 REMARK 465 MSE D 1 REMARK 465 ASP D 58 REMARK 465 ILE D 59 REMARK 465 VAL D 60 REMARK 465 SER D 61 REMARK 465 ALA D 62 REMARK 465 HIS D 123 REMARK 465 GLY D 124 REMARK 465 GLY D 125 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MSE A 1 CG SE CE REMARK 470 ILE A 59 CG1 CG2 CD1 REMARK 470 LYS A 115 CE NZ REMARK 470 LEU A 122 CG CD1 CD2 REMARK 470 MSE B 1 CG SE CE REMARK 470 LYS B 2 CG CD CE NZ REMARK 470 ASP B 63 CG OD1 OD2 REMARK 470 GLU B 64 CG CD OE1 OE2 REMARK 470 LEU B 122 CG CD1 CD2 REMARK 470 MSE C 1 CG SE CE REMARK 470 LYS C 2 CG CD CE NZ REMARK 470 ASP C 63 CG OD1 OD2 REMARK 470 LYS C 74 CD CE NZ REMARK 470 LYS C 82 CD CE NZ REMARK 470 LEU C 122 CG CD1 CD2 REMARK 470 LYS D 2 CG CD CE NZ REMARK 470 LYS D 32 CD CE NZ REMARK 470 ASP D 63 CG OD1 OD2 REMARK 470 LYS D 68 CG CD CE NZ REMARK 470 ASN D 73 CG OD1 ND2 REMARK 470 LYS D 74 CG CD CE NZ REMARK 470 LYS D 82 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS D 8 O HOH D 252 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 30 75.00 -119.40 REMARK 500 PHE A 52 -2.74 67.08 REMARK 500 ASP A 72 -125.57 54.71 REMARK 500 THR A 105 -115.13 40.52 REMARK 500 ASP B 30 71.33 -113.74 REMARK 500 PHE B 52 -3.95 69.54 REMARK 500 ASP B 72 -125.10 55.98 REMARK 500 THR B 105 -119.38 50.56 REMARK 500 ASP C 30 73.30 -116.02 REMARK 500 PHE C 52 -3.65 68.21 REMARK 500 ASP C 72 -120.33 52.18 REMARK 500 THR C 105 -114.92 40.97 REMARK 500 PHE D 52 -3.14 68.17 REMARK 500 ASP D 72 -124.42 56.24 REMARK 500 THR D 105 -115.42 40.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 201 DBREF 4IDI A 1 125 UNP Q7RAS9 Q7RAS9_PLAYO 1 125 DBREF 4IDI B 1 125 UNP Q7RAS9 Q7RAS9_PLAYO 1 125 DBREF 4IDI C 1 125 UNP Q7RAS9 Q7RAS9_PLAYO 1 125 DBREF 4IDI D 1 125 UNP Q7RAS9 Q7RAS9_PLAYO 1 125 SEQADV 4IDI MSE A -18 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI GLY A -17 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI SER A -16 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI SER A -15 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS A -14 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS A -13 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS A -12 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS A -11 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS A -10 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS A -9 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI SER A -8 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI SER A -7 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI GLY A -6 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI LEU A -5 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI VAL A -4 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI PRO A -3 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI ARG A -2 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI GLY A -1 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI SER A 0 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI MSE A 70 UNP Q7RAS9 LEU 70 ENGINEERED MUTATION SEQADV 4IDI MSE B -18 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI GLY B -17 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI SER B -16 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI SER B -15 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS B -14 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS B -13 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS B -12 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS B -11 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS B -10 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS B -9 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI SER B -8 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI SER B -7 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI GLY B -6 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI LEU B -5 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI VAL B -4 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI PRO B -3 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI ARG B -2 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI GLY B -1 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI SER B 0 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI MSE B 70 UNP Q7RAS9 LEU 70 ENGINEERED MUTATION SEQADV 4IDI MSE C -18 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI GLY C -17 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI SER C -16 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI SER C -15 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS C -14 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS C -13 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS C -12 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS C -11 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS C -10 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS C -9 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI SER C -8 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI SER C -7 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI GLY C -6 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI LEU C -5 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI VAL C -4 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI PRO C -3 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI ARG C -2 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI GLY C -1 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI SER C 0 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI MSE C 70 UNP Q7RAS9 LEU 70 ENGINEERED MUTATION SEQADV 4IDI MSE D -18 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI GLY D -17 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI SER D -16 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI SER D -15 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS D -14 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS D -13 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS D -12 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS D -11 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS D -10 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI HIS D -9 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI SER D -8 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI SER D -7 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI GLY D -6 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI LEU D -5 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI VAL D -4 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI PRO D -3 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI ARG D -2 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI GLY D -1 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI SER D 0 UNP Q7RAS9 EXPRESSION TAG SEQADV 4IDI MSE D 70 UNP Q7RAS9 LEU 70 ENGINEERED MUTATION SEQRES 1 A 144 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 144 LEU VAL PRO ARG GLY SER MSE LYS VAL LYS ILE GLU LEU SEQRES 3 A 144 LYS PHE LEU GLY GLY LEU GLU SER TYR LEU GLU ASP LYS SEQRES 4 A 144 SER LYS ASN TYR VAL THR LEU GLU ILE ASP SER LYS GLU SEQRES 5 A 144 LEU ASN PHE GLU ASN LEU ILE ALA PHE ILE ARG ASP ASN SEQRES 6 A 144 ILE ILE GLU LYS LYS PHE VAL PHE SER ASP TYR ASP ILE SEQRES 7 A 144 VAL SER ALA ASP GLU LYS LEU CYS LYS VAL MSE VAL ASP SEQRES 8 A 144 ASN LYS GLU TYR SER ASN TYR ASN LEU LYS ASP LYS ALA SEQRES 9 A 144 LYS ILE LYS PRO GLY ILE ILE VAL LEU VAL ASN GLU TYR SEQRES 10 A 144 ASP TRP GLU ILE LEU GLY THR TYR SER TYR GLN ILE LYS SEQRES 11 A 144 ASN ASP ASP LYS ILE CYS PHE LEU SER THR LEU HIS GLY SEQRES 12 A 144 GLY SEQRES 1 B 144 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 144 LEU VAL PRO ARG GLY SER MSE LYS VAL LYS ILE GLU LEU SEQRES 3 B 144 LYS PHE LEU GLY GLY LEU GLU SER TYR LEU GLU ASP LYS SEQRES 4 B 144 SER LYS ASN TYR VAL THR LEU GLU ILE ASP SER LYS GLU SEQRES 5 B 144 LEU ASN PHE GLU ASN LEU ILE ALA PHE ILE ARG ASP ASN SEQRES 6 B 144 ILE ILE GLU LYS LYS PHE VAL PHE SER ASP TYR ASP ILE SEQRES 7 B 144 VAL SER ALA ASP GLU LYS LEU CYS LYS VAL MSE VAL ASP SEQRES 8 B 144 ASN LYS GLU TYR SER ASN TYR ASN LEU LYS ASP LYS ALA SEQRES 9 B 144 LYS ILE LYS PRO GLY ILE ILE VAL LEU VAL ASN GLU TYR SEQRES 10 B 144 ASP TRP GLU ILE LEU GLY THR TYR SER TYR GLN ILE LYS SEQRES 11 B 144 ASN ASP ASP LYS ILE CYS PHE LEU SER THR LEU HIS GLY SEQRES 12 B 144 GLY SEQRES 1 C 144 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 C 144 LEU VAL PRO ARG GLY SER MSE LYS VAL LYS ILE GLU LEU SEQRES 3 C 144 LYS PHE LEU GLY GLY LEU GLU SER TYR LEU GLU ASP LYS SEQRES 4 C 144 SER LYS ASN TYR VAL THR LEU GLU ILE ASP SER LYS GLU SEQRES 5 C 144 LEU ASN PHE GLU ASN LEU ILE ALA PHE ILE ARG ASP ASN SEQRES 6 C 144 ILE ILE GLU LYS LYS PHE VAL PHE SER ASP TYR ASP ILE SEQRES 7 C 144 VAL SER ALA ASP GLU LYS LEU CYS LYS VAL MSE VAL ASP SEQRES 8 C 144 ASN LYS GLU TYR SER ASN TYR ASN LEU LYS ASP LYS ALA SEQRES 9 C 144 LYS ILE LYS PRO GLY ILE ILE VAL LEU VAL ASN GLU TYR SEQRES 10 C 144 ASP TRP GLU ILE LEU GLY THR TYR SER TYR GLN ILE LYS SEQRES 11 C 144 ASN ASP ASP LYS ILE CYS PHE LEU SER THR LEU HIS GLY SEQRES 12 C 144 GLY SEQRES 1 D 144 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 D 144 LEU VAL PRO ARG GLY SER MSE LYS VAL LYS ILE GLU LEU SEQRES 3 D 144 LYS PHE LEU GLY GLY LEU GLU SER TYR LEU GLU ASP LYS SEQRES 4 D 144 SER LYS ASN TYR VAL THR LEU GLU ILE ASP SER LYS GLU SEQRES 5 D 144 LEU ASN PHE GLU ASN LEU ILE ALA PHE ILE ARG ASP ASN SEQRES 6 D 144 ILE ILE GLU LYS LYS PHE VAL PHE SER ASP TYR ASP ILE SEQRES 7 D 144 VAL SER ALA ASP GLU LYS LEU CYS LYS VAL MSE VAL ASP SEQRES 8 D 144 ASN LYS GLU TYR SER ASN TYR ASN LEU LYS ASP LYS ALA SEQRES 9 D 144 LYS ILE LYS PRO GLY ILE ILE VAL LEU VAL ASN GLU TYR SEQRES 10 D 144 ASP TRP GLU ILE LEU GLY THR TYR SER TYR GLN ILE LYS SEQRES 11 D 144 ASN ASP ASP LYS ILE CYS PHE LEU SER THR LEU HIS GLY SEQRES 12 D 144 GLY MODRES 4IDI MSE A 1 MET SELENOMETHIONINE MODRES 4IDI MSE A 70 MET SELENOMETHIONINE MODRES 4IDI MSE B 1 MET SELENOMETHIONINE MODRES 4IDI MSE B 70 MET SELENOMETHIONINE MODRES 4IDI MSE C 1 MET SELENOMETHIONINE MODRES 4IDI MSE C 70 MET SELENOMETHIONINE MODRES 4IDI MSE D 70 MET SELENOMETHIONINE HET MSE A 1 5 HET MSE A 70 8 HET MSE B 1 5 HET MSE B 70 8 HET MSE C 1 5 HET MSE C 70 8 HET MSE D 70 8 HET GOL B 201 6 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 7(C5 H11 N O2 SE) FORMUL 5 GOL C3 H8 O3 FORMUL 6 HOH *238(H2 O) HELIX 1 1 GLY A 12 LEU A 17 5 6 HELIX 2 2 ASN A 35 ILE A 47 1 13 HELIX 3 3 GLU A 101 LEU A 103 5 3 HELIX 4 4 GLY A 104 TYR A 108 5 5 HELIX 5 5 GLY B 12 LEU B 17 5 6 HELIX 6 6 ASN B 35 ILE B 47 1 13 HELIX 7 7 GLU B 101 TYR B 108 5 8 HELIX 8 8 GLY C 12 LEU C 17 5 6 HELIX 9 9 ASN C 35 ILE C 47 1 13 HELIX 10 10 GLU C 101 LEU C 103 5 3 HELIX 11 11 GLY C 104 TYR C 108 5 5 HELIX 12 12 GLY D 12 LEU D 17 5 6 HELIX 13 13 ASN D 35 ILE D 47 1 13 HELIX 14 14 GLU D 101 TYR D 108 5 8 SHEET 1 A 7 LYS A 74 ASN A 80 0 SHEET 2 A 7 LEU A 66 VAL A 71 -1 N VAL A 71 O LYS A 74 SHEET 3 A 7 TYR A 24 ASP A 30 -1 N GLU A 28 O MSE A 70 SHEET 4 A 7 LYS A 2 LEU A 10 -1 N ILE A 5 O LEU A 27 SHEET 5 A 7 LYS A 115 SER A 120 1 O ILE A 116 N LYS A 8 SHEET 6 A 7 ILE A 91 VAL A 95 -1 N ILE A 92 O LEU A 119 SHEET 7 A 7 TYR A 98 ASP A 99 -1 O TYR A 98 N VAL A 95 SHEET 1 B 7 LYS B 74 ASN B 80 0 SHEET 2 B 7 LEU B 66 VAL B 71 -1 N VAL B 71 O LYS B 74 SHEET 3 B 7 TYR B 24 ASP B 30 -1 N GLU B 28 O MSE B 70 SHEET 4 B 7 LYS B 2 LEU B 10 -1 N LEU B 7 O VAL B 25 SHEET 5 B 7 LYS B 115 SER B 120 1 O ILE B 116 N LYS B 8 SHEET 6 B 7 ILE B 91 VAL B 95 -1 N ILE B 92 O LEU B 119 SHEET 7 B 7 TYR B 98 ASP B 99 -1 O TYR B 98 N VAL B 95 SHEET 1 C 7 LYS C 74 ASN C 80 0 SHEET 2 C 7 LEU C 66 VAL C 71 -1 N VAL C 69 O TYR C 76 SHEET 3 C 7 TYR C 24 ASP C 30 -1 N GLU C 28 O MSE C 70 SHEET 4 C 7 LYS C 2 LEU C 10 -1 N LEU C 7 O VAL C 25 SHEET 5 C 7 LYS C 115 SER C 120 1 O ILE C 116 N LYS C 8 SHEET 6 C 7 ILE C 91 VAL C 95 -1 N ILE C 92 O LEU C 119 SHEET 7 C 7 TYR C 98 ASP C 99 -1 O TYR C 98 N VAL C 95 SHEET 1 D 7 LYS D 74 ASN D 80 0 SHEET 2 D 7 LEU D 66 VAL D 71 -1 N VAL D 69 O TYR D 76 SHEET 3 D 7 TYR D 24 ILE D 29 -1 N GLU D 28 O MSE D 70 SHEET 4 D 7 VAL D 3 LEU D 10 -1 N LEU D 7 O VAL D 25 SHEET 5 D 7 LYS D 115 SER D 120 1 O ILE D 116 N LYS D 8 SHEET 6 D 7 ILE D 91 VAL D 95 -1 N ILE D 92 O LEU D 119 SHEET 7 D 7 TYR D 98 ASP D 99 -1 O TYR D 98 N VAL D 95 LINK C MSE A 1 N LYS A 2 1555 1555 1.35 LINK C VAL A 69 N MSE A 70 1555 1555 1.34 LINK C MSE A 70 N VAL A 71 1555 1555 1.35 LINK C MSE B 1 N LYS B 2 1555 1555 1.35 LINK C VAL B 69 N MSE B 70 1555 1555 1.33 LINK C MSE B 70 N VAL B 71 1555 1555 1.35 LINK C MSE C 1 N LYS C 2 1555 1555 1.35 LINK C VAL C 69 N MSE C 70 1555 1555 1.34 LINK C MSE C 70 N VAL C 71 1555 1555 1.34 LINK C VAL D 69 N MSE D 70 1555 1555 1.34 LINK C MSE D 70 N VAL D 71 1555 1555 1.33 SITE 1 AC1 5 GLU B 49 LEU B 103 SER B 107 TYR B 108 SITE 2 AC1 5 GLN B 109 CRYST1 32.590 72.720 107.510 90.00 92.64 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.030684 0.000000 0.001415 0.00000 SCALE2 0.000000 0.013751 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009311 0.00000 HETATM 1 N MSE A 1 13.591 41.317 84.640 1.00 45.20 N ANISOU 1 N MSE A 1 5786 4257 7131 -868 -919 -1113 N HETATM 2 CA MSE A 1 13.597 42.088 83.398 1.00 44.65 C ANISOU 2 CA MSE A 1 5818 4346 6802 -818 -1030 -1228 C HETATM 3 C MSE A 1 14.797 43.055 83.322 1.00 42.44 C ANISOU 3 C MSE A 1 5601 4229 6296 -654 -877 -1144 C HETATM 4 O MSE A 1 15.377 43.418 84.352 1.00 39.22 O ANISOU 4 O MSE A 1 5109 3851 5941 -602 -721 -979 O HETATM 5 CB MSE A 1 12.270 42.850 83.218 1.00 47.35 C ANISOU 5 CB MSE A 1 6017 4807 7168 -919 -1210 -1193 C