HEADER TRANSFERASE/TRANSFERASE INHIBITOR 13-DEC-12 4IDT TITLE CRYSTAL STRUCTURE OF NIK WITH 11-BROMO-5,6,7,8-TETRAHYDROPYRIMIDO[4', TITLE 2 5':3,4]CYCLOHEPTA[1,2-B]INDOL-2-AMINE (T28) COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 14; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 330-680; COMPND 5 SYNONYM: NF-KAPPA-BETA-INDUCING KINASE, HSNIK, SERINE/THREONINE- COMPND 6 PROTEIN KINASE NIK; COMPND 7 EC: 2.7.11.25; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAP3K14, NIK KEYWDS NIK, NUCLEAR FACTOR (NF)-KB, P100 PROCESSING, 2-AMINOPYRIMIDINE, KEYWDS 2 TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.LIU,A.SUDOM,Z.WANG REVDAT 2 28-FEB-24 4IDT 1 REMARK SEQADV REVDAT 1 17-APR-13 4IDT 0 JRNL AUTH K.LI,L.R.MCGEE,B.FISHER,A.SUDOM,J.LIU,S.M.RUBENSTEIN, JRNL AUTH 2 M.K.ANWER,T.D.CUSHING,Y.SHIN,M.AYRES,F.LEE,J.EKSTEROWICZ, JRNL AUTH 3 P.FAULDER,B.WASZKOWYCZ,O.PLOTNIKOVA,E.FARRELLY,S.H.XIAO, JRNL AUTH 4 G.CHEN,Z.WANG JRNL TITL INHIBITING NF-KB-INDUCING KINASE (NIK): DISCOVERY, JRNL TITL 2 STRUCTURE-BASED DESIGN, SYNTHESIS, STRUCTURE ACTIVITY JRNL TITL 3 RELATIONSHIP, AND CO-CRYSTAL STRUCTURES JRNL REF BIOORG.MED.CHEM.LETT. V. 23 1238 2013 JRNL REFN ISSN 0960-894X JRNL PMID 23374866 JRNL DOI 10.1016/J.BMCL.2013.01.012 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 59.77 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 32431 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 1639 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 59.7720 - 6.8221 0.99 2641 126 0.1747 0.1859 REMARK 3 2 6.8221 - 5.4161 0.98 2562 132 0.1974 0.2303 REMARK 3 3 5.4161 - 4.7318 0.98 2589 148 0.1747 0.1948 REMARK 3 4 4.7318 - 4.2993 0.99 2595 130 0.1508 0.1876 REMARK 3 5 4.2993 - 3.9912 0.99 2590 139 0.1504 0.1849 REMARK 3 6 3.9912 - 3.7559 0.99 2642 139 0.1642 0.1653 REMARK 3 7 3.7559 - 3.5678 0.99 2572 127 0.1771 0.2322 REMARK 3 8 3.5678 - 3.4125 0.99 2629 160 0.1825 0.2249 REMARK 3 9 3.4125 - 3.2812 0.99 2589 148 0.1878 0.2070 REMARK 3 10 3.2812 - 3.1680 0.99 2612 123 0.1923 0.2789 REMARK 3 11 3.1680 - 3.0689 0.99 2626 136 0.2032 0.2807 REMARK 3 12 3.0689 - 2.9812 0.99 2595 134 0.2065 0.2418 REMARK 3 13 2.9812 - 2.9027 0.99 2559 132 0.2106 0.2572 REMARK 3 14 2.9027 - 2.8319 0.99 2606 172 0.2085 0.2612 REMARK 3 15 2.8319 - 2.7675 0.99 2631 140 0.2150 0.2292 REMARK 3 16 2.7675 - 2.7086 0.99 2580 111 0.2181 0.2474 REMARK 3 17 2.7086 - 2.6544 0.98 2557 158 0.2252 0.2955 REMARK 3 18 2.6544 - 2.6043 0.98 2659 119 0.2335 0.2863 REMARK 3 19 2.6043 - 2.5578 0.98 2583 123 0.2471 0.2922 REMARK 3 20 2.5578 - 2.5145 0.99 2582 171 0.2334 0.2794 REMARK 3 21 2.5145 - 2.4739 0.99 2573 137 0.2448 0.2970 REMARK 3 22 2.4739 - 2.4359 0.98 2613 134 0.2561 0.2759 REMARK 3 23 2.4359 - 2.4000 0.98 2572 145 0.2710 0.3242 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.980 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5375 REMARK 3 ANGLE : 1.118 7283 REMARK 3 CHIRALITY : 0.052 772 REMARK 3 PLANARITY : 0.005 952 REMARK 3 DIHEDRAL : 16.882 2013 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4IDT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000076626. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALA 3.1.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32431 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 84.535 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : 0.08500 REMARK 200 FOR THE DATA SET : 12.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.39700 REMARK 200 R SYM FOR SHELL (I) : 0.39700 REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.97350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 29.48675 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 88.46025 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 325 REMARK 465 ALA A 326 REMARK 465 MET A 327 REMARK 465 GLY A 328 REMARK 465 SER A 329 REMARK 465 LYS A 330 REMARK 465 PHE A 331 REMARK 465 SER A 332 REMARK 465 PRO A 543 REMARK 465 ASP A 544 REMARK 465 GLY A 545 REMARK 465 LEU A 546 REMARK 465 GLY A 547 REMARK 465 LYS A 548 REMARK 465 ASP A 549 REMARK 465 LEU A 550 REMARK 465 LEU A 551 REMARK 465 PRO A 676 REMARK 465 PRO A 677 REMARK 465 ASN A 678 REMARK 465 GLN A 679 REMARK 465 ALA A 680 REMARK 465 GLY B 325 REMARK 465 ALA B 326 REMARK 465 MET B 327 REMARK 465 GLY B 328 REMARK 465 SER B 329 REMARK 465 LYS B 330 REMARK 465 PHE B 331 REMARK 465 SER B 332 REMARK 465 VAL B 333 REMARK 465 PRO B 543 REMARK 465 ASP B 544 REMARK 465 GLY B 545 REMARK 465 LEU B 546 REMARK 465 GLY B 547 REMARK 465 LYS B 548 REMARK 465 ASP B 549 REMARK 465 LEU B 550 REMARK 465 LEU B 551 REMARK 465 ASN B 678 REMARK 465 GLN B 679 REMARK 465 ALA B 680 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 335 HD1 HIS A 339 1.06 REMARK 500 H ARG B 405 O HOH B 862 1.35 REMARK 500 HE ARG A 601 O HOH A 954 1.39 REMARK 500 HH22 ARG B 368 O HOH B 922 1.44 REMARK 500 HG SER A 352 O HOH A 942 1.48 REMARK 500 HZ1 LYS A 429 OE2 GLU A 440 1.51 REMARK 500 OE1 GLN A 598 HH11 ARG A 673 1.55 REMARK 500 HZ2 LYS B 429 OE2 GLU B 440 1.57 REMARK 500 HZ3 LYS B 576 O ARG B 641 1.57 REMARK 500 O VAL A 333 H GLU A 335 1.58 REMARK 500 O GLU A 335 ND1 HIS A 339 1.78 REMARK 500 OE2 GLU B 396 O HOH B 822 1.83 REMARK 500 O HOH A 856 O HOH B 839 1.84 REMARK 500 O HOH A 937 O HOH B 919 1.84 REMARK 500 O HOH A 836 O HOH A 953 1.86 REMARK 500 O HOH A 933 O HOH A 961 1.91 REMARK 500 OE1 GLU B 560 O HOH B 894 1.91 REMARK 500 O HOH A 816 O HOH A 857 1.91 REMARK 500 O HOH A 970 O HOH A 985 1.94 REMARK 500 OE1 GLU B 632 NH2 ARG B 635 1.95 REMARK 500 NH2 ARG B 368 O HOH B 922 1.95 REMARK 500 OE1 GLU A 646 O HOH A 933 1.96 REMARK 500 NE ARG A 601 O HOH A 954 1.99 REMARK 500 OE1 GLU B 439 O HOH B 912 1.99 REMARK 500 O HOH A 827 O HOH A 971 2.04 REMARK 500 O GLN B 542 O HOH B 930 2.04 REMARK 500 O HOH A 938 O HOH A 943 2.04 REMARK 500 O GLN A 342 O HOH A 939 2.05 REMARK 500 O HOH A 955 O HOH A 973 2.06 REMARK 500 O GLN A 542 O HOH A 979 2.10 REMARK 500 OE2 GLU B 470 O HOH B 925 2.12 REMARK 500 OE1 GLU A 461 O HOH A 907 2.12 REMARK 500 O LEU A 404 O HOH A 815 2.13 REMARK 500 O HOH A 885 O HOH A 958 2.14 REMARK 500 NH1 ARG A 510 O GLN A 542 2.14 REMARK 500 OE1 GLU B 611 O HOH B 869 2.14 REMARK 500 NH1 ARG B 616 O HOH B 877 2.14 REMARK 500 O HOH A 951 O HOH A 976 2.14 REMARK 500 O PRO B 595 OE2 GLU B 617 2.15 REMARK 500 OE1 GLU A 671 O HOH A 959 2.17 REMARK 500 OG SER A 352 O HOH A 942 2.17 REMARK 500 OD1 ASP B 526 OG SER B 528 2.17 REMARK 500 OD1 ASP A 574 O HOH A 845 2.17 REMARK 500 OE1 GLU B 413 O HOH B 897 2.19 REMARK 500 OD1 ASP B 490 OG SER B 663 2.19 REMARK 500 N ARG B 405 O HOH B 862 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 486 CA - CB - SG ANGL. DEV. = 8.3 DEGREES REMARK 500 LYS B 373 CD - CE - NZ ANGL. DEV. = -21.9 DEGREES REMARK 500 ARG B 509 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 PRO B 595 C - N - CA ANGL. DEV. = 9.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 334 -31.39 62.27 REMARK 500 GLU A 369 -168.29 -101.94 REMARK 500 TYR A 393 102.20 -161.25 REMARK 500 GLU A 396 -13.07 84.32 REMARK 500 ASP A 515 48.04 -154.47 REMARK 500 TRP A 596 -38.07 70.11 REMARK 500 PRO A 614 33.98 -73.67 REMARK 500 TRP A 665 -81.10 -36.62 REMARK 500 ARG A 666 -95.00 -86.00 REMARK 500 ARG B 366 107.27 117.29 REMARK 500 TYR B 393 101.76 -160.35 REMARK 500 GLU B 396 -11.38 83.39 REMARK 500 GLN B 403 -159.60 66.39 REMARK 500 ASP B 515 50.92 -153.25 REMARK 500 ASP B 534 101.96 40.62 REMARK 500 PRO B 614 34.67 -72.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE T28 A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE T28 B 701 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IDV RELATED DB: PDB DBREF 4IDT A 330 680 UNP Q99558 M3K14_HUMAN 330 680 DBREF 4IDT B 330 680 UNP Q99558 M3K14_HUMAN 330 680 SEQADV 4IDT GLY A 325 UNP Q99558 EXPRESSION TAG SEQADV 4IDT ALA A 326 UNP Q99558 EXPRESSION TAG SEQADV 4IDT MET A 327 UNP Q99558 EXPRESSION TAG SEQADV 4IDT GLY A 328 UNP Q99558 EXPRESSION TAG SEQADV 4IDT SER A 329 UNP Q99558 EXPRESSION TAG SEQADV 4IDT ASP A 549 UNP Q99558 SER 549 CONFLICT SEQADV 4IDT GLY B 325 UNP Q99558 EXPRESSION TAG SEQADV 4IDT ALA B 326 UNP Q99558 EXPRESSION TAG SEQADV 4IDT MET B 327 UNP Q99558 EXPRESSION TAG SEQADV 4IDT GLY B 328 UNP Q99558 EXPRESSION TAG SEQADV 4IDT SER B 329 UNP Q99558 EXPRESSION TAG SEQADV 4IDT ASP B 549 UNP Q99558 SER 549 CONFLICT SEQRES 1 A 356 GLY ALA MET GLY SER LYS PHE SER VAL GLU GLU TYR LEU SEQRES 2 A 356 VAL HIS ALA LEU GLN GLY SER VAL SER SER GLY GLN ALA SEQRES 3 A 356 HIS SER LEU THR SER LEU ALA LYS THR TRP ALA ALA ARG SEQRES 4 A 356 GLY SER ARG SER ARG GLU PRO SER PRO LYS THR GLU ASP SEQRES 5 A 356 ASN GLU GLY VAL LEU LEU THR GLU LYS LEU LYS PRO VAL SEQRES 6 A 356 ASP TYR GLU TYR ARG GLU GLU VAL HIS TRP ALA THR HIS SEQRES 7 A 356 GLN LEU ARG LEU GLY ARG GLY SER PHE GLY GLU VAL HIS SEQRES 8 A 356 ARG MET GLU ASP LYS GLN THR GLY PHE GLN CYS ALA VAL SEQRES 9 A 356 LYS LYS VAL ARG LEU GLU VAL PHE ARG ALA GLU GLU LEU SEQRES 10 A 356 MET ALA CYS ALA GLY LEU THR SER PRO ARG ILE VAL PRO SEQRES 11 A 356 LEU TYR GLY ALA VAL ARG GLU GLY PRO TRP VAL ASN ILE SEQRES 12 A 356 PHE MET GLU LEU LEU GLU GLY GLY SER LEU GLY GLN LEU SEQRES 13 A 356 VAL LYS GLU GLN GLY CYS LEU PRO GLU ASP ARG ALA LEU SEQRES 14 A 356 TYR TYR LEU GLY GLN ALA LEU GLU GLY LEU GLU TYR LEU SEQRES 15 A 356 HIS SER ARG ARG ILE LEU HIS GLY ASP VAL LYS ALA ASP SEQRES 16 A 356 ASN VAL LEU LEU SER SER ASP GLY SER HIS ALA ALA LEU SEQRES 17 A 356 CYS ASP PHE GLY HIS ALA VAL CYS LEU GLN PRO ASP GLY SEQRES 18 A 356 LEU GLY LYS ASP LEU LEU THR GLY ASP TYR ILE PRO GLY SEQRES 19 A 356 THR GLU THR HIS MET ALA PRO GLU VAL VAL LEU GLY ARG SEQRES 20 A 356 SER CYS ASP ALA LYS VAL ASP VAL TRP SER SER CYS CYS SEQRES 21 A 356 MET MET LEU HIS MET LEU ASN GLY CYS HIS PRO TRP THR SEQRES 22 A 356 GLN PHE PHE ARG GLY PRO LEU CYS LEU LYS ILE ALA SER SEQRES 23 A 356 GLU PRO PRO PRO VAL ARG GLU ILE PRO PRO SER CYS ALA SEQRES 24 A 356 PRO LEU THR ALA GLN ALA ILE GLN GLU GLY LEU ARG LYS SEQRES 25 A 356 GLU PRO ILE HIS ARG VAL SER ALA ALA GLU LEU GLY GLY SEQRES 26 A 356 LYS VAL ASN ARG ALA LEU GLN GLN VAL GLY GLY LEU LYS SEQRES 27 A 356 SER PRO TRP ARG GLY GLU TYR LYS GLU PRO ARG HIS PRO SEQRES 28 A 356 PRO PRO ASN GLN ALA SEQRES 1 B 356 GLY ALA MET GLY SER LYS PHE SER VAL GLU GLU TYR LEU SEQRES 2 B 356 VAL HIS ALA LEU GLN GLY SER VAL SER SER GLY GLN ALA SEQRES 3 B 356 HIS SER LEU THR SER LEU ALA LYS THR TRP ALA ALA ARG SEQRES 4 B 356 GLY SER ARG SER ARG GLU PRO SER PRO LYS THR GLU ASP SEQRES 5 B 356 ASN GLU GLY VAL LEU LEU THR GLU LYS LEU LYS PRO VAL SEQRES 6 B 356 ASP TYR GLU TYR ARG GLU GLU VAL HIS TRP ALA THR HIS SEQRES 7 B 356 GLN LEU ARG LEU GLY ARG GLY SER PHE GLY GLU VAL HIS SEQRES 8 B 356 ARG MET GLU ASP LYS GLN THR GLY PHE GLN CYS ALA VAL SEQRES 9 B 356 LYS LYS VAL ARG LEU GLU VAL PHE ARG ALA GLU GLU LEU SEQRES 10 B 356 MET ALA CYS ALA GLY LEU THR SER PRO ARG ILE VAL PRO SEQRES 11 B 356 LEU TYR GLY ALA VAL ARG GLU GLY PRO TRP VAL ASN ILE SEQRES 12 B 356 PHE MET GLU LEU LEU GLU GLY GLY SER LEU GLY GLN LEU SEQRES 13 B 356 VAL LYS GLU GLN GLY CYS LEU PRO GLU ASP ARG ALA LEU SEQRES 14 B 356 TYR TYR LEU GLY GLN ALA LEU GLU GLY LEU GLU TYR LEU SEQRES 15 B 356 HIS SER ARG ARG ILE LEU HIS GLY ASP VAL LYS ALA ASP SEQRES 16 B 356 ASN VAL LEU LEU SER SER ASP GLY SER HIS ALA ALA LEU SEQRES 17 B 356 CYS ASP PHE GLY HIS ALA VAL CYS LEU GLN PRO ASP GLY SEQRES 18 B 356 LEU GLY LYS ASP LEU LEU THR GLY ASP TYR ILE PRO GLY SEQRES 19 B 356 THR GLU THR HIS MET ALA PRO GLU VAL VAL LEU GLY ARG SEQRES 20 B 356 SER CYS ASP ALA LYS VAL ASP VAL TRP SER SER CYS CYS SEQRES 21 B 356 MET MET LEU HIS MET LEU ASN GLY CYS HIS PRO TRP THR SEQRES 22 B 356 GLN PHE PHE ARG GLY PRO LEU CYS LEU LYS ILE ALA SER SEQRES 23 B 356 GLU PRO PRO PRO VAL ARG GLU ILE PRO PRO SER CYS ALA SEQRES 24 B 356 PRO LEU THR ALA GLN ALA ILE GLN GLU GLY LEU ARG LYS SEQRES 25 B 356 GLU PRO ILE HIS ARG VAL SER ALA ALA GLU LEU GLY GLY SEQRES 26 B 356 LYS VAL ASN ARG ALA LEU GLN GLN VAL GLY GLY LEU LYS SEQRES 27 B 356 SER PRO TRP ARG GLY GLU TYR LYS GLU PRO ARG HIS PRO SEQRES 28 B 356 PRO PRO ASN GLN ALA HET T28 A 701 32 HET T28 B 701 32 HETNAM T28 11-BROMO-5,6,7,8-TETRAHYDROPYRIMIDO[4',5':3, HETNAM 2 T28 4]CYCLOHEPTA[1,2-B]INDOL-2-AMINE FORMUL 3 T28 2(C15 H13 BR N4) FORMUL 5 HOH *317(H2 O) HELIX 1 1 GLU A 334 GLN A 342 1 9 HELIX 2 2 GLN A 349 GLY A 364 1 16 HELIX 3 3 GLU A 434 ARG A 437 5 4 HELIX 4 4 ALA A 438 ALA A 443 1 6 HELIX 5 5 SER A 476 GLY A 485 1 10 HELIX 6 6 PRO A 488 SER A 508 1 21 HELIX 7 7 LYS A 517 ASP A 519 5 3 HELIX 8 8 THR A 559 MET A 563 5 5 HELIX 9 9 ALA A 564 LEU A 569 1 6 HELIX 10 10 ALA A 575 GLY A 592 1 18 HELIX 11 11 LEU A 604 GLU A 611 1 8 HELIX 12 12 PRO A 613 ILE A 618 5 6 HELIX 13 13 ALA A 623 LEU A 634 1 12 HELIX 14 14 SER A 643 GLY A 659 1 17 HELIX 15 15 GLU B 335 GLN B 342 1 8 HELIX 16 16 GLN B 349 GLY B 364 1 16 HELIX 17 17 GLU B 434 ARG B 437 5 4 HELIX 18 18 ALA B 438 ALA B 443 1 6 HELIX 19 19 SER B 476 GLN B 484 1 9 HELIX 20 20 PRO B 488 SER B 508 1 21 HELIX 21 21 LYS B 517 ASP B 519 5 3 HELIX 22 22 THR B 559 MET B 563 5 5 HELIX 23 23 ALA B 564 LEU B 569 1 6 HELIX 24 24 ALA B 575 GLY B 592 1 18 HELIX 25 25 LEU B 604 GLU B 611 1 8 HELIX 26 26 PRO B 614 ILE B 618 5 5 HELIX 27 27 ALA B 623 LEU B 634 1 12 HELIX 28 28 SER B 643 GLY B 659 1 17 SHEET 1 A 7 VAL A 345 SER A 347 0 SHEET 2 A 7 ASN A 377 LEU A 381 1 O LEU A 381 N SER A 346 SHEET 3 A 7 LEU A 455 GLU A 461 -1 O ARG A 460 N GLU A 378 SHEET 4 A 7 TRP A 464 MET A 469 -1 O ASN A 466 N VAL A 459 SHEET 5 A 7 GLN A 425 ARG A 432 -1 N ALA A 427 O MET A 469 SHEET 6 A 7 GLY A 412 ASP A 419 -1 N HIS A 415 O VAL A 428 SHEET 7 A 7 TRP A 399 ARG A 408 -1 N GLY A 407 O VAL A 414 SHEET 1 B 2 ILE A 511 LEU A 512 0 SHEET 2 B 2 VAL A 539 CYS A 540 -1 O VAL A 539 N LEU A 512 SHEET 1 C 2 VAL A 521 LEU A 523 0 SHEET 2 C 2 ALA A 530 LEU A 532 -1 O ALA A 531 N LEU A 522 SHEET 1 D 7 VAL B 345 SER B 347 0 SHEET 2 D 7 ASN B 377 LEU B 381 1 O GLY B 379 N SER B 346 SHEET 3 D 7 LEU B 455 GLU B 461 -1 O ARG B 460 N GLU B 378 SHEET 4 D 7 TRP B 464 MET B 469 -1 O ASN B 466 N VAL B 459 SHEET 5 D 7 GLN B 425 ARG B 432 -1 N ALA B 427 O MET B 469 SHEET 6 D 7 GLY B 412 ASP B 419 -1 N HIS B 415 O VAL B 428 SHEET 7 D 7 TRP B 399 ARG B 408 -1 N GLY B 407 O VAL B 414 SHEET 1 E 2 ILE B 511 LEU B 512 0 SHEET 2 E 2 VAL B 539 CYS B 540 -1 O VAL B 539 N LEU B 512 SHEET 1 F 2 VAL B 521 LEU B 523 0 SHEET 2 F 2 ALA B 530 LEU B 532 -1 O ALA B 531 N LEU B 522 CISPEP 1 GLY A 602 PRO A 603 0 -3.37 CISPEP 2 GLY B 602 PRO B 603 0 -2.51 SITE 1 AC1 12 LEU A 406 VAL A 414 ALA A 427 MET A 469 SITE 2 AC1 12 GLU A 470 LEU A 472 SER A 476 GLN A 479 SITE 3 AC1 12 LEU A 522 CYS A 533 HOH A 830 HOH A 852 SITE 1 AC2 11 LEU B 406 GLY B 409 VAL B 414 ALA B 427 SITE 2 AC2 11 MET B 469 GLU B 470 LEU B 472 SER B 476 SITE 3 AC2 11 LEU B 522 ASP B 534 HOH B 856 CRYST1 84.530 84.530 117.947 90.00 90.00 90.00 P 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011830 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011830 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008478 0.00000