HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 16-DEC-12 4IG5 OBSLTE 03-JUL-19 4IG5 TITLE CRYSTAL STRUCTURE OF METHIMAZOLE INHIBITED DIMERIC GOAT TITLE 2 LACTOPEROXIDASE AT 1.97A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: LACTOPEROXIDASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 118-712; COMPND 5 EC: 1.11.1.7 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAPRA HIRCUS; SOURCE 3 ORGANISM_COMMON: DOMESTIC GOAT,GOATS; SOURCE 4 ORGANISM_TAXID: 9925 KEYWDS LACTOPEROXIDASE, HEME, OXIDOREDUCTASE-OXIDOREDUCTASE INHIBITOR KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.P.SINGH,N.SINGH,A.K.SINGH,M.SINHA,P.KAUR,S.SHARMA,T.P.SINGH REVDAT 3 03-JUL-19 4IG5 1 OBSLTE JRNL LINK REVDAT 2 01-APR-15 4IG5 1 JRNL REVDAT 1 05-JUN-13 4IG5 0 JRNL AUTH NONE JRNL TITL RETRACTION: MODE OF BINDING OF THE ANTITHYROID DRUG JRNL TITL 2 PROPYLTHIOURACIL TO MAMMALIAN HAEM PEROXIDASES. JRNL REF ACTA CRYSTALLOGR F STRUCT V. 71 804 2015 JRNL REF 2 BIOL COMMUN JRNL REFN ESSN 2053-230X JRNL PMID 26057817 JRNL DOI 10.1107/S2053230X15006962 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.P.SINGH,A.SINGH,G.S.KUSHWAHA,A.K.SINGH,P.KAUR,S.SHARMA, REMARK 1 AUTH 2 T.P.SINGH REMARK 1 TITL MODE OF BINDING OF THE ANTITHYROID DRUG PROPYLTHIOURACIL TO REMARK 1 TITL 2 MAMMALIAN HAEM PEROXIDASES. REMARK 1 REF ACTA CRYSTALLOGR F STRUCT V. 71 304 2015 REMARK 1 REF 2 BIOL COMMUN REMARK 1 REFN ESSN 2053-230X REMARK 1 PMID 25760705 REMARK 1 DOI 10.1107/S2053230X15001806 REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 78463 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2415 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.97 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4918 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 81.68 REMARK 3 BIN R VALUE (WORKING SET) : 0.2560 REMARK 3 BIN FREE R VALUE SET COUNT : 143 REMARK 3 BIN FREE R VALUE : 0.3190 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9507 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 326 REMARK 3 SOLVENT ATOMS : 826 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.12000 REMARK 3 B22 (A**2) : 1.38000 REMARK 3 B33 (A**2) : -1.50000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.40000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.179 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.156 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.110 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.701 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 10151 ; 0.020 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 13814 ; 2.422 ; 1.992 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1188 ; 7.697 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 480 ;37.229 ;23.750 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1610 ;15.499 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 76 ;17.635 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1468 ; 0.144 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7858 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 595 REMARK 3 RESIDUE RANGE : A 601 A 616 REMARK 3 RESIDUE RANGE : A 701 A 1144 REMARK 3 ORIGIN FOR THE GROUP (A): 7.6727 0.8587 31.5146 REMARK 3 T TENSOR REMARK 3 T11: 0.0409 T22: 0.0180 REMARK 3 T33: 0.0126 T12: 0.0118 REMARK 3 T13: 0.0198 T23: -0.0000 REMARK 3 L TENSOR REMARK 3 L11: 0.7586 L22: 0.4747 REMARK 3 L33: 1.0288 L12: 0.1321 REMARK 3 L13: 0.4137 L23: 0.1805 REMARK 3 S TENSOR REMARK 3 S11: -0.0203 S12: 0.0110 S13: -0.0031 REMARK 3 S21: -0.0361 S22: 0.0323 S23: -0.0320 REMARK 3 S31: 0.0525 S32: 0.1218 S33: -0.0120 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 595 REMARK 3 RESIDUE RANGE : B 601 B 617 REMARK 3 RESIDUE RANGE : B 701 B 1082 REMARK 3 ORIGIN FOR THE GROUP (A): 28.6736 41.1416 9.1166 REMARK 3 T TENSOR REMARK 3 T11: 0.0230 T22: 0.0765 REMARK 3 T33: 0.0285 T12: -0.0060 REMARK 3 T13: -0.0154 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 1.2577 L22: 0.5078 REMARK 3 L33: 1.5999 L12: 0.0833 REMARK 3 L13: -0.2621 L23: 0.3038 REMARK 3 S TENSOR REMARK 3 S11: 0.0225 S12: -0.1802 S13: -0.0992 REMARK 3 S21: 0.0280 S22: 0.0584 S23: -0.0889 REMARK 3 S31: -0.0198 S32: 0.3164 S33: -0.0810 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4IG5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 5 REMARK 5 THE ENTRY IS OBSOLETED DUE TO PAPER RETRACTION REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-DEC-12. REMARK 100 THE DEPOSITION ID IS D_1000076709. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : Y REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 78463 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.970 REMARK 200 RESOLUTION RANGE LOW (A) : 80.530 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 3SXV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM NITRATE, 30% PEG 3350, REMARK 280 PH 6.2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 46.51000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 241 O5 NAG A 602 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG B 593 CG ARG B 593 CD 0.168 REMARK 500 ARG B 593 CD ARG B 593 NE 0.156 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 9 C - N - CD ANGL. DEV. = -19.0 DEGREES REMARK 500 VAL A 10 N - CA - C ANGL. DEV. = 17.3 DEGREES REMARK 500 PRO A 11 C - N - CD ANGL. DEV. = -21.9 DEGREES REMARK 500 ARG A 22 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 67 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG A 177 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG A 177 NE - CZ - NH2 ANGL. DEV. = -7.0 DEGREES REMARK 500 ARG A 397 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 397 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG B 96 NE - CZ - NH1 ANGL. DEV. = -3.5 DEGREES REMARK 500 PRO B 168 C - N - CA ANGL. DEV. = 11.7 DEGREES REMARK 500 PRO B 170 C - N - CD ANGL. DEV. = -20.6 DEGREES REMARK 500 GLN B 173 CB - CA - C ANGL. DEV. = -18.2 DEGREES REMARK 500 GLN B 173 N - CA - C ANGL. DEV. = 33.0 DEGREES REMARK 500 PRO B 209 C - N - CD ANGL. DEV. = -17.3 DEGREES REMARK 500 ARG B 593 CB - CA - C ANGL. DEV. = 16.6 DEGREES REMARK 500 ARG B 593 CG - CD - NE ANGL. DEV. = 14.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 6 -165.86 73.91 REMARK 500 PRO A 11 -133.19 56.27 REMARK 500 ALA A 56 -24.98 -151.73 REMARK 500 ASN A 68 29.56 49.28 REMARK 500 ASP A 137 -120.16 50.56 REMARK 500 PRO A 171 1.93 -69.66 REMARK 500 TYR A 172 2.49 86.48 REMARK 500 ASP A 188 22.75 -142.18 REMARK 500 PRO A 209 49.22 -86.78 REMARK 500 GLU A 371 46.10 -109.15 REMARK 500 ASP A 389 51.33 -140.91 REMARK 500 ASN A 473 106.60 -160.64 REMARK 500 LYS A 485 -24.63 73.17 REMARK 500 PRO B 9 -145.20 -105.20 REMARK 500 CYS B 28 -1.46 72.27 REMARK 500 ALA B 56 -24.83 -149.95 REMARK 500 ASP B 137 -126.68 55.96 REMARK 500 CYS B 167 63.14 70.06 REMARK 500 PRO B 168 112.09 -17.69 REMARK 500 THR B 169 179.51 64.65 REMARK 500 PRO B 170 -131.84 46.99 REMARK 500 GLN B 173 -59.89 -134.23 REMARK 500 LEU B 175 -178.30 77.58 REMARK 500 HIS B 245 54.23 39.40 REMARK 500 ASN B 333 2.92 -68.13 REMARK 500 GLU B 371 46.28 -109.87 REMARK 500 LYS B 485 -13.29 62.83 REMARK 500 PRO B 589 -3.48 -58.96 REMARK 500 ARG B 593 -159.29 50.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 11 LEU A 12 -135.02 REMARK 500 CYS B 167 PRO B 168 -135.17 REMARK 500 PRO B 168 THR B 169 126.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 602 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 351 NE2 REMARK 620 2 HEM B 602 NA 98.1 REMARK 620 3 HEM B 602 NB 95.1 90.6 REMARK 620 4 HEM B 602 NC 91.1 170.8 89.1 REMARK 620 5 HEM B 602 ND 92.8 89.5 172.0 89.5 REMARK 620 6 MMZ B 617 S2 171.4 73.6 87.5 97.2 84.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 110 OD1 REMARK 620 2 PHE B 186 O 77.3 REMARK 620 3 THR B 184 O 135.3 84.1 REMARK 620 4 ASP B 110 O 77.3 115.3 74.7 REMARK 620 5 THR B 184 OG1 144.7 98.4 77.7 133.1 REMARK 620 6 SER B 190 OG 91.1 156.8 117.5 80.7 79.4 REMARK 620 7 ASP B 188 OD1 78.6 81.0 138.1 146.6 66.2 77.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 601 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 351 NE2 REMARK 620 2 HEM A 601 NA 95.2 REMARK 620 3 HEM A 601 NB 95.3 91.5 REMARK 620 4 HEM A 601 NC 90.1 174.4 89.8 REMARK 620 5 HEM A 601 ND 89.9 88.3 174.7 89.9 REMARK 620 6 MMZ A 616 S2 167.7 72.7 87.1 102.0 87.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 606 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 110 OD1 REMARK 620 2 ASP A 110 O 78.4 REMARK 620 3 THR A 184 OG1 148.5 127.9 REMARK 620 4 PHE A 186 O 77.3 117.6 99.8 REMARK 620 5 THR A 184 O 138.3 74.8 71.8 87.5 REMARK 620 6 ASP A 188 OD1 80.0 149.2 68.8 78.1 134.7 REMARK 620 7 SER A 190 OG 86.6 74.8 85.0 156.5 115.7 82.3 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 608 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 609 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 610 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 611 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 612 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 613 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 614 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 615 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MMZ A 616 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG B 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG B 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 609 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 610 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 611 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 612 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 613 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 614 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 615 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 616 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MMZ B 617 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR LINKED RESIDUES B 604 to 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR LINKED RESIDUES B 607 to 608 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SXV RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE COMPLEX OF GOAT LACTOPEROXIDASE WITH REMARK 900 AMITROLE AT 2.1 A RESOLUTION REMARK 900 RELATED ID: 3R55 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE COMPLEX OF GOAT LACTOPEROXIDASE WITH REMARK 900 PYRAZINAMIDE AT 2.1 A RESOLUTION DBREF 4IG5 A 1 595 UNP A3F9D6 A3F9D6_CAPHI 118 712 DBREF 4IG5 B 1 595 UNP A3F9D6 A3F9D6_CAPHI 118 712 SEQRES 1 A 595 SER TRP GLU VAL GLY CYS GLY ALA PRO VAL PRO LEU VAL SEQRES 2 A 595 THR CYS ASP GLU GLN SER PRO TYR ARG THR ILE THR GLY SEQRES 3 A 595 ASP CYS ASN ASN ARG ARG SER PRO ALA LEU GLY ALA ALA SEQRES 4 A 595 ASN ARG ALA LEU ALA ARG TRP LEU PRO ALA GLU TYR GLU SEQRES 5 A 595 ASP GLY LEU ALA VAL PRO PHE GLY TRP THR GLN ARG LYS SEQRES 6 A 595 THR ARG ASN GLY PHE ARG VAL PRO LEU ALA ARG GLU VAL SEQRES 7 A 595 SER ASN LYS ILE VAL GLY TYR LEU ASP GLU GLU GLY VAL SEQRES 8 A 595 LEU ASP GLN ASN ARG SER LEU LEU PHE MET GLN TRP GLY SEQRES 9 A 595 GLN ILE VAL ASP HIS ASP LEU ASP PHE ALA PRO GLU THR SEQRES 10 A 595 GLU LEU GLY SER SER GLU HIS SER LYS VAL GLN CYS GLU SEQRES 11 A 595 GLU TYR CYS VAL GLN GLY ASP GLU CYS PHE PRO ILE MET SEQRES 12 A 595 PHE PRO LYS ASN ASP PRO LYS LEU LYS THR GLN GLY LYS SEQRES 13 A 595 CYS MET PRO PHE PHE ARG ALA GLY PHE VAL CYS PRO THR SEQRES 14 A 595 PRO PRO TYR GLN SER LEU ALA ARG ASP GLN ILE ASN ALA SEQRES 15 A 595 VAL THR SER PHE LEU ASP ALA SER LEU VAL TYR GLY SER SEQRES 16 A 595 GLU PRO SER LEU ALA SER ARG LEU ARG ASN LEU SER SER SEQRES 17 A 595 PRO LEU GLY LEU MET ALA VAL ASN GLN GLU ALA TRP ASP SEQRES 18 A 595 HIS GLY LEU ALA TYR PRO PRO PHE ASN ASN VAL LYS PRO SEQRES 19 A 595 SER PRO CYS GLU PHE ILE ASN THR THR ALA HIS VAL PRO SEQRES 20 A 595 CYS PHE GLN ALA GLY ASP SER ARG ALA SER GLU GLN ILE SEQRES 21 A 595 LEU LEU ALA THR VAL HIS THR LEU LEU LEU ARG GLU HIS SEQRES 22 A 595 ASN ARG LEU ALA ARG GLU LEU LYS ARG LEU ASN PRO HIS SEQRES 23 A 595 TRP ASP GLY GLU MET LEU TYR GLN GLU ALA ARG LYS ILE SEQRES 24 A 595 LEU GLY ALA PHE ILE GLN ILE ILE THR PHE ARG ASP TYR SEQRES 25 A 595 LEU PRO ILE VAL LEU GLY SER GLU MET GLN LYS TRP ILE SEQRES 26 A 595 PRO PRO TYR GLN GLY TYR ASN ASN SER VAL ASP PRO ARG SEQRES 27 A 595 ILE SER ASN VAL PHE THR PHE ALA PHE ARG PHE GLY HIS SEQRES 28 A 595 MET GLU VAL PRO SER THR VAL SER ARG LEU ASP GLU ASN SEQRES 29 A 595 TYR GLN PRO TRP GLY PRO GLU ALA GLU LEU PRO LEU HIS SEQRES 30 A 595 THR LEU PHE PHE ASN THR TRP ARG ILE ILE LYS ASP GLY SEQRES 31 A 595 GLY ILE ASP PRO LEU VAL ARG GLY LEU LEU ALA LYS ASN SEQRES 32 A 595 SER LYS LEU MET ASN GLN ASN LYS MET VAL THR SER GLU SEQRES 33 A 595 LEU ARG ASN LYS LEU PHE GLN PRO THR HIS LYS VAL HIS SEQRES 34 A 595 GLY PHE ASP LEU ALA ALA ILE ASN LEU GLN ARG CYS ARG SEQRES 35 A 595 ASP HIS GLY MET PRO GLY TYR ASN SER TRP ARG GLY PHE SEQRES 36 A 595 CYS GLY LEU SER GLN PRO LYS THR LEU LYS GLY LEU GLN SEQRES 37 A 595 ALA VAL LEU LYS ASN LYS VAL LEU ALA LYS LYS LEU LEU SEQRES 38 A 595 ASP LEU TYR LYS THR PRO ASP ASN ILE ASP ILE TRP ILE SEQRES 39 A 595 GLY GLY ASN ALA GLU PRO MET VAL GLU ARG GLY ARG VAL SEQRES 40 A 595 GLY PRO LEU LEU ALA CYS LEU LEU GLY ARG GLN PHE GLN SEQRES 41 A 595 GLN ILE ARG ASP GLY ASP ARG PHE TRP TRP GLU ASN PRO SEQRES 42 A 595 GLY VAL PHE THR GLU LYS GLN ARG ASP SER LEU GLN LYS SEQRES 43 A 595 VAL SER PHE SER ARG LEU ILE CYS ASP ASN THR HIS ILE SEQRES 44 A 595 THR LYS VAL PRO LEU HIS ALA PHE GLN ALA ASN ASN TYR SEQRES 45 A 595 PRO HIS ASP PHE VAL ASP CYS SER ALA VAL ASP LYS LEU SEQRES 46 A 595 ASP LEU SER PRO TRP ALA SER ARG GLU ASN SEQRES 1 B 595 SER TRP GLU VAL GLY CYS GLY ALA PRO VAL PRO LEU VAL SEQRES 2 B 595 THR CYS ASP GLU GLN SER PRO TYR ARG THR ILE THR GLY SEQRES 3 B 595 ASP CYS ASN ASN ARG ARG SER PRO ALA LEU GLY ALA ALA SEQRES 4 B 595 ASN ARG ALA LEU ALA ARG TRP LEU PRO ALA GLU TYR GLU SEQRES 5 B 595 ASP GLY LEU ALA VAL PRO PHE GLY TRP THR GLN ARG LYS SEQRES 6 B 595 THR ARG ASN GLY PHE ARG VAL PRO LEU ALA ARG GLU VAL SEQRES 7 B 595 SER ASN LYS ILE VAL GLY TYR LEU ASP GLU GLU GLY VAL SEQRES 8 B 595 LEU ASP GLN ASN ARG SER LEU LEU PHE MET GLN TRP GLY SEQRES 9 B 595 GLN ILE VAL ASP HIS ASP LEU ASP PHE ALA PRO GLU THR SEQRES 10 B 595 GLU LEU GLY SER SER GLU HIS SER LYS VAL GLN CYS GLU SEQRES 11 B 595 GLU TYR CYS VAL GLN GLY ASP GLU CYS PHE PRO ILE MET SEQRES 12 B 595 PHE PRO LYS ASN ASP PRO LYS LEU LYS THR GLN GLY LYS SEQRES 13 B 595 CYS MET PRO PHE PHE ARG ALA GLY PHE VAL CYS PRO THR SEQRES 14 B 595 PRO PRO TYR GLN SER LEU ALA ARG ASP GLN ILE ASN ALA SEQRES 15 B 595 VAL THR SER PHE LEU ASP ALA SER LEU VAL TYR GLY SER SEQRES 16 B 595 GLU PRO SER LEU ALA SER ARG LEU ARG ASN LEU SER SER SEQRES 17 B 595 PRO LEU GLY LEU MET ALA VAL ASN GLN GLU ALA TRP ASP SEQRES 18 B 595 HIS GLY LEU ALA TYR PRO PRO PHE ASN ASN VAL LYS PRO SEQRES 19 B 595 SER PRO CYS GLU PHE ILE ASN THR THR ALA HIS VAL PRO SEQRES 20 B 595 CYS PHE GLN ALA GLY ASP SER ARG ALA SER GLU GLN ILE SEQRES 21 B 595 LEU LEU ALA THR VAL HIS THR LEU LEU LEU ARG GLU HIS SEQRES 22 B 595 ASN ARG LEU ALA ARG GLU LEU LYS ARG LEU ASN PRO HIS SEQRES 23 B 595 TRP ASP GLY GLU MET LEU TYR GLN GLU ALA ARG LYS ILE SEQRES 24 B 595 LEU GLY ALA PHE ILE GLN ILE ILE THR PHE ARG ASP TYR SEQRES 25 B 595 LEU PRO ILE VAL LEU GLY SER GLU MET GLN LYS TRP ILE SEQRES 26 B 595 PRO PRO TYR GLN GLY TYR ASN ASN SER VAL ASP PRO ARG SEQRES 27 B 595 ILE SER ASN VAL PHE THR PHE ALA PHE ARG PHE GLY HIS SEQRES 28 B 595 MET GLU VAL PRO SER THR VAL SER ARG LEU ASP GLU ASN SEQRES 29 B 595 TYR GLN PRO TRP GLY PRO GLU ALA GLU LEU PRO LEU HIS SEQRES 30 B 595 THR LEU PHE PHE ASN THR TRP ARG ILE ILE LYS ASP GLY SEQRES 31 B 595 GLY ILE ASP PRO LEU VAL ARG GLY LEU LEU ALA LYS ASN SEQRES 32 B 595 SER LYS LEU MET ASN GLN ASN LYS MET VAL THR SER GLU SEQRES 33 B 595 LEU ARG ASN LYS LEU PHE GLN PRO THR HIS LYS VAL HIS SEQRES 34 B 595 GLY PHE ASP LEU ALA ALA ILE ASN LEU GLN ARG CYS ARG SEQRES 35 B 595 ASP HIS GLY MET PRO GLY TYR ASN SER TRP ARG GLY PHE SEQRES 36 B 595 CYS GLY LEU SER GLN PRO LYS THR LEU LYS GLY LEU GLN SEQRES 37 B 595 ALA VAL LEU LYS ASN LYS VAL LEU ALA LYS LYS LEU LEU SEQRES 38 B 595 ASP LEU TYR LYS THR PRO ASP ASN ILE ASP ILE TRP ILE SEQRES 39 B 595 GLY GLY ASN ALA GLU PRO MET VAL GLU ARG GLY ARG VAL SEQRES 40 B 595 GLY PRO LEU LEU ALA CYS LEU LEU GLY ARG GLN PHE GLN SEQRES 41 B 595 GLN ILE ARG ASP GLY ASP ARG PHE TRP TRP GLU ASN PRO SEQRES 42 B 595 GLY VAL PHE THR GLU LYS GLN ARG ASP SER LEU GLN LYS SEQRES 43 B 595 VAL SER PHE SER ARG LEU ILE CYS ASP ASN THR HIS ILE SEQRES 44 B 595 THR LYS VAL PRO LEU HIS ALA PHE GLN ALA ASN ASN TYR SEQRES 45 B 595 PRO HIS ASP PHE VAL ASP CYS SER ALA VAL ASP LYS LEU SEQRES 46 B 595 ASP LEU SER PRO TRP ALA SER ARG GLU ASN MODRES 4IG5 ASN B 95 ASN GLYCOSYLATION SITE MODRES 4IG5 ASN A 95 ASN GLYCOSYLATION SITE MODRES 4IG5 ASN A 332 ASN GLYCOSYLATION SITE MODRES 4IG5 ASN B 332 ASN GLYCOSYLATION SITE MODRES 4IG5 ASN A 205 ASN GLYCOSYLATION SITE MODRES 4IG5 ASN B 205 ASN GLYCOSYLATION SITE MODRES 4IG5 ASN A 241 ASN GLYCOSYLATION SITE MODRES 4IG5 ASN B 241 ASN GLYCOSYLATION SITE HET HEM A 601 43 HET NAG A 602 14 HET NAG A 603 14 HET NAG A 604 14 HET NAG A 605 14 HET CA A 606 1 HET NO3 A 607 4 HET NO3 A 608 4 HET NO3 A 609 4 HET NO3 A 610 4 HET NO3 A 611 4 HET GOL A 612 6 HET GOL A 613 6 HET GOL A 614 6 HET GOL A 615 6 HET MMZ A 616 7 HET CA B 601 1 HET HEM B 602 43 HET NAG B 603 14 HET NAG B 604 14 HET NAG B 605 14 HET NAG B 606 14 HET NAG B 607 14 HET NAG B 608 14 HET NO3 B 609 4 HET NO3 B 610 4 HET NO3 B 611 4 HET NO3 B 612 4 HET GOL B 613 6 HET GOL B 614 6 HET GOL B 615 6 HET GOL B 616 6 HET MMZ B 617 7 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM NAG N-ACETYL-D-GLUCOSAMINE HETNAM CA CALCIUM ION HETNAM NO3 NITRATE ION HETNAM GOL GLYCEROL HETNAM MMZ 1-METHYL-1,3-DIHYDRO-2H-IMIDAZOLE-2-THIONE HETSYN HEM HEME HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN MMZ METHIMAZOLE FORMUL 3 HEM 2(C34 H32 FE N4 O4) FORMUL 4 NAG 10(C8 H15 N O6) FORMUL 8 CA 2(CA 2+) FORMUL 9 NO3 9(N O3 1-) FORMUL 14 GOL 8(C3 H8 O3) FORMUL 18 MMZ 2(C4 H6 N2 S) FORMUL 34 HOH *826(H2 O) HELIX 1 1 LEU A 74 VAL A 83 1 10 HELIX 2 2 LEU A 98 ASP A 112 1 15 HELIX 3 3 SER A 122 GLU A 131 1 10 HELIX 4 4 ASP A 148 THR A 153 5 6 HELIX 5 5 ALA A 189 GLY A 194 1 6 HELIX 6 6 GLU A 196 ARG A 204 1 9 HELIX 7 7 SER A 235 ILE A 240 1 6 HELIX 8 8 GLN A 259 ASN A 284 1 26 HELIX 9 9 ASP A 288 ASP A 311 1 24 HELIX 10 10 ASP A 311 GLY A 318 1 8 HELIX 11 11 GLU A 320 ILE A 325 1 6 HELIX 12 12 SER A 340 PHE A 347 1 8 HELIX 13 13 ARG A 348 VAL A 354 5 7 HELIX 14 14 HIS A 377 PHE A 380 5 4 HELIX 15 15 THR A 383 LYS A 388 1 6 HELIX 16 16 ILE A 392 LYS A 402 1 11 HELIX 17 17 THR A 414 ASN A 419 1 6 HELIX 18 18 ASP A 432 HIS A 444 1 13 HELIX 19 19 GLY A 448 CYS A 456 1 9 HELIX 20 20 THR A 463 LYS A 472 1 10 HELIX 21 21 ASN A 473 LYS A 485 1 13 HELIX 22 22 THR A 486 ILE A 490 5 5 HELIX 23 23 ASP A 491 ALA A 498 1 8 HELIX 24 24 GLY A 508 GLY A 525 1 18 HELIX 25 25 THR A 537 GLN A 545 1 9 HELIX 26 26 SER A 548 THR A 557 1 10 HELIX 27 27 SER A 580 VAL A 582 5 3 HELIX 28 28 LEU A 587 ALA A 591 5 5 HELIX 29 29 LEU B 74 VAL B 83 1 10 HELIX 30 30 LEU B 98 ASP B 112 1 15 HELIX 31 31 SER B 122 GLU B 131 1 10 HELIX 32 32 PRO B 149 GLN B 154 1 6 HELIX 33 33 ALA B 189 GLY B 194 1 6 HELIX 34 34 GLU B 196 LEU B 203 1 8 HELIX 35 35 SER B 235 ILE B 240 1 6 HELIX 36 36 GLN B 259 ASN B 284 1 26 HELIX 37 37 ASP B 288 ASP B 311 1 24 HELIX 38 38 TYR B 312 GLY B 318 1 7 HELIX 39 39 GLU B 320 ILE B 325 1 6 HELIX 40 40 SER B 340 PHE B 347 1 8 HELIX 41 41 ARG B 348 VAL B 354 5 7 HELIX 42 42 HIS B 377 PHE B 380 5 4 HELIX 43 43 THR B 383 LYS B 388 1 6 HELIX 44 44 ILE B 392 LYS B 402 1 11 HELIX 45 45 THR B 414 ASN B 419 1 6 HELIX 46 46 ASP B 432 HIS B 444 1 13 HELIX 47 47 GLY B 448 CYS B 456 1 9 HELIX 48 48 THR B 463 LYS B 472 1 10 HELIX 49 49 ASN B 473 LYS B 485 1 13 HELIX 50 50 THR B 486 ILE B 490 5 5 HELIX 51 51 ASP B 491 GLU B 499 1 9 HELIX 52 52 GLY B 508 GLY B 525 1 18 HELIX 53 53 THR B 537 GLN B 545 1 9 HELIX 54 54 SER B 548 THR B 557 1 10 HELIX 55 55 SER B 580 VAL B 582 5 3 HELIX 56 56 LEU B 587 ALA B 591 5 5 SHEET 1 A 2 ARG A 41 ALA A 42 0 SHEET 2 A 2 ILE A 180 ASN A 181 -1 O ASN A 181 N ARG A 41 SHEET 1 B 2 LEU A 92 SER A 97 0 SHEET 2 B 2 ASN A 403 LYS A 405 -1 O SER A 404 N ASP A 93 SHEET 1 C 2 ILE A 142 MET A 143 0 SHEET 2 C 2 CYS A 157 MET A 158 -1 O MET A 158 N ILE A 142 SHEET 1 D 2 THR A 357 SER A 359 0 SHEET 2 D 2 GLU A 373 PRO A 375 -1 O LEU A 374 N VAL A 358 SHEET 1 E 2 LEU A 421 PHE A 422 0 SHEET 2 E 2 HIS A 429 PHE A 431 -1 O PHE A 431 N LEU A 421 SHEET 1 F 2 LYS A 561 PRO A 563 0 SHEET 2 F 2 PHE A 576 ASP A 578 -1 O VAL A 577 N VAL A 562 SHEET 1 G 2 ARG B 41 ALA B 42 0 SHEET 2 G 2 ILE B 180 ASN B 181 -1 O ASN B 181 N ARG B 41 SHEET 1 H 2 LEU B 92 SER B 97 0 SHEET 2 H 2 ASN B 403 LYS B 405 -1 O SER B 404 N ASP B 93 SHEET 1 I 2 ILE B 142 MET B 143 0 SHEET 2 I 2 CYS B 157 MET B 158 -1 O MET B 158 N ILE B 142 SHEET 1 J 2 ARG B 204 ASN B 205 0 SHEET 2 J 2 LEU B 212 MET B 213 -1 O LEU B 212 N ASN B 205 SHEET 1 K 2 THR B 357 SER B 359 0 SHEET 2 K 2 GLU B 373 PRO B 375 -1 O LEU B 374 N VAL B 358 SHEET 1 L 2 LEU B 421 PHE B 422 0 SHEET 2 L 2 HIS B 429 PHE B 431 -1 O PHE B 431 N LEU B 421 SHEET 1 M 2 LYS B 561 VAL B 562 0 SHEET 2 M 2 VAL B 577 ASP B 578 -1 O VAL B 577 N VAL B 562 SSBOND 1 CYS A 6 CYS A 167 1555 1555 1.81 SSBOND 2 CYS A 15 CYS A 28 1555 1555 2.01 SSBOND 3 CYS A 129 CYS A 139 1555 1555 2.00 SSBOND 4 CYS A 133 CYS A 157 1555 1555 1.98 SSBOND 5 CYS A 237 CYS A 248 1555 1555 2.02 SSBOND 6 CYS A 456 CYS A 513 1555 1555 2.02 SSBOND 7 CYS A 554 CYS A 579 1555 1555 2.02 SSBOND 8 CYS B 6 CYS B 167 1555 1555 2.05 SSBOND 9 CYS B 15 CYS B 28 1555 1555 2.02 SSBOND 10 CYS B 129 CYS B 139 1555 1555 2.01 SSBOND 11 CYS B 133 CYS B 157 1555 1555 2.04 SSBOND 12 CYS B 237 CYS B 248 1555 1555 2.04 SSBOND 13 CYS B 456 CYS B 513 1555 1555 2.06 SSBOND 14 CYS B 554 CYS B 579 1555 1555 2.02 LINK O4 NAG B 607 C1 NAG B 608 1555 1555 1.42 LINK O4 NAG B 604 C1 NAG B 605 1555 1555 1.43 LINK ND2 ASN B 95 C1 NAG B 603 1555 1555 1.43 LINK ND2 ASN A 95 C1 NAG A 603 1555 1555 1.43 LINK ND2 ASN A 332 C1 NAG A 604 1555 1555 1.44 LINK ND2 ASN B 332 C1 NAG B 606 1555 1555 1.44 LINK ND2 ASN A 205 C1 NAG A 605 1555 1555 1.46 LINK ND2 ASN B 205 C1 NAG B 607 1555 1555 1.47 LINK ND2 ASN A 241 C1 NAG A 602 1555 1555 1.48 LINK ND2 ASN B 241 C1 NAG B 604 1555 1555 1.50 LINK NE2 HIS B 351 FE HEM B 602 1555 1555 2.04 LINK OD1 ASP B 110 CA CA B 601 1555 1555 2.17 LINK NE2 HIS A 351 FE HEM A 601 1555 1555 2.23 LINK O PHE B 186 CA CA B 601 1555 1555 2.32 LINK OD1 ASP A 110 CA CA A 606 1555 1555 2.33 LINK O ASP A 110 CA CA A 606 1555 1555 2.46 LINK O THR B 184 CA CA B 601 1555 1555 2.46 LINK OG1 THR A 184 CA CA A 606 1555 1555 2.47 LINK O ASP B 110 CA CA B 601 1555 1555 2.47 LINK O PHE A 186 CA CA A 606 1555 1555 2.52 LINK O THR A 184 CA CA A 606 1555 1555 2.55 LINK OD1 ASP A 188 CA CA A 606 1555 1555 2.57 LINK OG1 THR B 184 CA CA B 601 1555 1555 2.61 LINK OG SER A 190 CA CA A 606 1555 1555 2.67 LINK FE HEM A 601 S2 MMZ A 616 1555 1555 2.69 LINK OG SER B 190 CA CA B 601 1555 1555 2.70 LINK FE HEM B 602 S2 MMZ B 617 1555 1555 2.70 LINK OD1 ASP B 188 CA CA B 601 1555 1555 2.75 LINK OD1 ASP A 108 CMD HEM A 601 1555 1555 1.43 LINK OD1 ASP B 108 CMD HEM B 602 1555 1555 1.46 LINK OE2 GLU A 258 CMB HEM A 601 1555 1555 1.66 LINK OE2 GLU B 258 CMB HEM B 602 1555 1555 1.50 CISPEP 1 PRO A 170 PRO A 171 0 9.38 CISPEP 2 LYS A 233 PRO A 234 0 8.61 CISPEP 3 TYR A 572 PRO A 573 0 -0.99 CISPEP 4 TRP B 2 GLU B 3 0 -20.37 CISPEP 5 LYS B 233 PRO B 234 0 -2.92 CISPEP 6 TYR B 572 PRO B 573 0 -4.08 SITE 1 AC1 23 MET A 101 GLY A 104 GLN A 105 ASP A 108 SITE 2 AC1 23 ASP A 112 PHE A 113 ALA A 114 ARG A 255 SITE 3 AC1 23 GLU A 258 GLN A 259 THR A 344 PHE A 347 SITE 4 AC1 23 ARG A 348 GLY A 350 HIS A 351 VAL A 354 SITE 5 AC1 23 PHE A 380 GLN A 423 ILE A 436 ARG A 440 SITE 6 AC1 23 MMZ A 616 HOH A 869 HOH A 937 SITE 1 AC2 6 ASN A 241 ALA A 244 TRP A 384 HOH A 934 SITE 2 AC2 6 HOH A1070 HOH A1086 SITE 1 AC3 3 ASN A 95 ARG A 96 GLN A 568 SITE 1 AC4 3 ASN A 332 HOH A1121 HOH A1128 SITE 1 AC5 11 ASN A 205 SER A 208 LEU A 210 ALA A 214 SITE 2 AC5 11 VAL A 215 GLN A 217 HOH A 791 HOH A 826 SITE 3 AC5 11 HOH A 847 HOH A 849 HOH A 910 SITE 1 AC6 5 ASP A 110 THR A 184 PHE A 186 ASP A 188 SITE 2 AC6 5 SER A 190 SITE 1 AC7 10 ALA A 44 ARG A 45 TRP A 46 LEU A 47 SITE 2 AC7 10 SER A 340 ASN A 341 VAL A 342 MET A 446 SITE 3 AC7 10 TRP A 452 HOH A 714 SITE 1 AC8 5 ILE A 240 ASN A 241 THR A 242 THR A 243 SITE 2 AC8 5 HOH A1077 SITE 1 AC9 7 LEU A 92 LYS A 402 ASN A 403 HOH A 922 SITE 2 AC9 7 HOH A 961 HOH A 989 HOH A1011 SITE 1 BC1 5 ILE A 306 PHE A 309 TRP A 529 TRP A 530 SITE 2 BC1 5 GLU A 531 SITE 1 BC2 4 ASN A 408 ASN A 410 LYS A 411 HOH A1002 SITE 1 BC3 9 GLU A 52 PHE A 59 GLY A 60 TRP A 61 SITE 2 BC3 9 THR A 62 LYS A 65 THR A 66 ARG A 71 SITE 3 BC3 9 VAL A 72 SITE 1 BC4 3 GLU A 52 LYS A 65 THR A 66 SITE 1 BC5 6 ALA A 56 VAL A 57 TRP A 61 ASP A 137 SITE 2 BC5 6 ARG A 162 HOH A 793 SITE 1 BC6 7 GLU A 116 GLU A 118 PRO A 159 PHE A 161 SITE 2 BC6 7 GLN A 423 HIS A 426 ILE A 436 SITE 1 BC7 6 GLN A 105 HIS A 109 ARG A 255 GLU A 258 SITE 2 BC7 6 HEM A 601 HOH A 728 SITE 1 BC8 5 ASP B 110 THR B 184 PHE B 186 ASP B 188 SITE 2 BC8 5 SER B 190 SITE 1 BC9 24 MET B 101 GLY B 104 GLN B 105 ASP B 108 SITE 2 BC9 24 ASP B 112 PHE B 113 ALA B 114 ARG B 255 SITE 3 BC9 24 GLU B 258 GLN B 259 THR B 344 PHE B 347 SITE 4 BC9 24 ARG B 348 GLY B 350 HIS B 351 VAL B 354 SITE 5 BC9 24 PHE B 380 GLN B 423 LEU B 433 ILE B 436 SITE 6 BC9 24 ARG B 440 MMZ B 617 HOH B 793 HOH B 887 SITE 1 CC1 6 ASN B 95 ARG B 96 ILE B 315 HOH B 830 SITE 2 CC1 6 HOH B 936 HOH B1030 SITE 1 CC2 3 ASN B 332 SER B 334 HOH B 922 SITE 1 CC3 10 ALA B 44 ARG B 45 TRP B 46 LEU B 47 SITE 2 CC3 10 SER B 340 ASN B 341 VAL B 342 MET B 446 SITE 3 CC3 10 TRP B 452 HOH B 716 SITE 1 CC4 6 ARG B 76 PRO B 149 LYS B 150 ASN B 419 SITE 2 CC4 6 HOH B 806 HOH B 988 SITE 1 CC5 4 HIS B 565 ALA B 566 PHE B 567 GLN B 568 SITE 1 CC6 5 LEU B 92 LYS B 402 ASN B 403 HOH B 895 SITE 2 CC6 5 HOH B 912 SITE 1 CC7 6 ALA B 56 VAL B 57 TRP B 61 ASP B 137 SITE 2 CC7 6 ARG B 162 HOH B 929 SITE 1 CC8 8 GLU B 52 PHE B 59 GLY B 60 TRP B 61 SITE 2 CC8 8 THR B 62 LYS B 65 ARG B 71 VAL B 72 SITE 1 CC9 4 GLU B 52 PHE B 59 LYS B 65 THR B 66 SITE 1 DC1 4 ARG B 527 ASN B 532 PRO B 533 HOH B 976 SITE 1 DC2 6 GLN B 105 HIS B 109 ARG B 255 GLU B 258 SITE 2 DC2 6 HEM B 602 HOH B 984 SITE 1 DC3 4 ASN B 241 ALA B 244 TRP B 384 HOH B 800 SITE 1 DC4 8 ASN B 205 SER B 208 LEU B 210 ALA B 214 SITE 2 DC4 8 VAL B 215 GLN B 217 HOH B 781 HOH B 839 CRYST1 80.310 93.020 81.530 90.00 89.97 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012452 0.000000 -0.000007 0.00000 SCALE2 0.000000 0.010750 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012265 0.00000