data_4IG6 # _entry.id 4IG6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4IG6 pdb_00004ig6 10.2210/pdb4ig6/pdb RCSB RCSB076710 ? ? WWPDB D_1000076710 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3KNU 'Crystal structure of tRNA (guanine-N1)-methyltransferase from Anaplasma phagocytophilum' unspecified TargetTrack SSGCID-AnphA.00316.a . unspecified # _pdbx_database_status.entry_id 4IG6 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-12-16 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Seattle Structural Genomics Center for Infectious Disease (SSGCID)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a tRNA (guanine-N1)-methyltransferase from Anaplasma phagocytophilum bound to S-adenosylhomocysteine' _citation.journal_abbrev 'TO BE PUBLISHED' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Edwards, T.E.' 1 ? primary 'Clifton, M.C.' 2 ? primary 'Seattle Structural Genomics Center for Infectious Disease (SSGCID)' 3 ? # _cell.length_a 105.110 _cell.length_b 105.110 _cell.length_c 92.250 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4IG6 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.entry_id 4IG6 _symmetry.Int_Tables_number 96 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'tRNA (guanine-N(1)-)-methyltransferase' 28075.984 1 2.1.1.228 ? ? ? 2 non-polymer syn S-ADENOSYL-L-HOMOCYSTEINE 384.411 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 4 water nat water 18.015 141 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'M1G-methyltransferase, tRNA [GM37] methyltransferase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAHHHHHHMGTLEAQTQGPGSMIFNVLTIFPQMFPGPLGVSNLGSALKKGLWTLNVFDIRAFANNKHNTVDDTPYGGGPG MLLRADVLGRCIDEVLSLHPNTKLMFTSPRGVSFTQDIARQTMNFDNITLLCGRFEGIDERVVDFYKLQEVSIGDYVLSG GELAAMVIIDTCVRMVPGVIGNAESLKQESMEGSLEYPQYTRPASWKGMEVPEVLLTGNHGEIEKWRRNASLSITAARRP DLLKDRYGENDVE ; _entity_poly.pdbx_seq_one_letter_code_can ;MAHHHHHHMGTLEAQTQGPGSMIFNVLTIFPQMFPGPLGVSNLGSALKKGLWTLNVFDIRAFANNKHNTVDDTPYGGGPG MLLRADVLGRCIDEVLSLHPNTKLMFTSPRGVSFTQDIARQTMNFDNITLLCGRFEGIDERVVDFYKLQEVSIGDYVLSG GELAAMVIIDTCVRMVPGVIGNAESLKQESMEGSLEYPQYTRPASWKGMEVPEVLLTGNHGEIEKWRRNASLSITAARRP DLLKDRYGENDVE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier SSGCID-AnphA.00316.a # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 MET n 1 10 GLY n 1 11 THR n 1 12 LEU n 1 13 GLU n 1 14 ALA n 1 15 GLN n 1 16 THR n 1 17 GLN n 1 18 GLY n 1 19 PRO n 1 20 GLY n 1 21 SER n 1 22 MET n 1 23 ILE n 1 24 PHE n 1 25 ASN n 1 26 VAL n 1 27 LEU n 1 28 THR n 1 29 ILE n 1 30 PHE n 1 31 PRO n 1 32 GLN n 1 33 MET n 1 34 PHE n 1 35 PRO n 1 36 GLY n 1 37 PRO n 1 38 LEU n 1 39 GLY n 1 40 VAL n 1 41 SER n 1 42 ASN n 1 43 LEU n 1 44 GLY n 1 45 SER n 1 46 ALA n 1 47 LEU n 1 48 LYS n 1 49 LYS n 1 50 GLY n 1 51 LEU n 1 52 TRP n 1 53 THR n 1 54 LEU n 1 55 ASN n 1 56 VAL n 1 57 PHE n 1 58 ASP n 1 59 ILE n 1 60 ARG n 1 61 ALA n 1 62 PHE n 1 63 ALA n 1 64 ASN n 1 65 ASN n 1 66 LYS n 1 67 HIS n 1 68 ASN n 1 69 THR n 1 70 VAL n 1 71 ASP n 1 72 ASP n 1 73 THR n 1 74 PRO n 1 75 TYR n 1 76 GLY n 1 77 GLY n 1 78 GLY n 1 79 PRO n 1 80 GLY n 1 81 MET n 1 82 LEU n 1 83 LEU n 1 84 ARG n 1 85 ALA n 1 86 ASP n 1 87 VAL n 1 88 LEU n 1 89 GLY n 1 90 ARG n 1 91 CYS n 1 92 ILE n 1 93 ASP n 1 94 GLU n 1 95 VAL n 1 96 LEU n 1 97 SER n 1 98 LEU n 1 99 HIS n 1 100 PRO n 1 101 ASN n 1 102 THR n 1 103 LYS n 1 104 LEU n 1 105 MET n 1 106 PHE n 1 107 THR n 1 108 SER n 1 109 PRO n 1 110 ARG n 1 111 GLY n 1 112 VAL n 1 113 SER n 1 114 PHE n 1 115 THR n 1 116 GLN n 1 117 ASP n 1 118 ILE n 1 119 ALA n 1 120 ARG n 1 121 GLN n 1 122 THR n 1 123 MET n 1 124 ASN n 1 125 PHE n 1 126 ASP n 1 127 ASN n 1 128 ILE n 1 129 THR n 1 130 LEU n 1 131 LEU n 1 132 CYS n 1 133 GLY n 1 134 ARG n 1 135 PHE n 1 136 GLU n 1 137 GLY n 1 138 ILE n 1 139 ASP n 1 140 GLU n 1 141 ARG n 1 142 VAL n 1 143 VAL n 1 144 ASP n 1 145 PHE n 1 146 TYR n 1 147 LYS n 1 148 LEU n 1 149 GLN n 1 150 GLU n 1 151 VAL n 1 152 SER n 1 153 ILE n 1 154 GLY n 1 155 ASP n 1 156 TYR n 1 157 VAL n 1 158 LEU n 1 159 SER n 1 160 GLY n 1 161 GLY n 1 162 GLU n 1 163 LEU n 1 164 ALA n 1 165 ALA n 1 166 MET n 1 167 VAL n 1 168 ILE n 1 169 ILE n 1 170 ASP n 1 171 THR n 1 172 CYS n 1 173 VAL n 1 174 ARG n 1 175 MET n 1 176 VAL n 1 177 PRO n 1 178 GLY n 1 179 VAL n 1 180 ILE n 1 181 GLY n 1 182 ASN n 1 183 ALA n 1 184 GLU n 1 185 SER n 1 186 LEU n 1 187 LYS n 1 188 GLN n 1 189 GLU n 1 190 SER n 1 191 MET n 1 192 GLU n 1 193 GLY n 1 194 SER n 1 195 LEU n 1 196 GLU n 1 197 TYR n 1 198 PRO n 1 199 GLN n 1 200 TYR n 1 201 THR n 1 202 ARG n 1 203 PRO n 1 204 ALA n 1 205 SER n 1 206 TRP n 1 207 LYS n 1 208 GLY n 1 209 MET n 1 210 GLU n 1 211 VAL n 1 212 PRO n 1 213 GLU n 1 214 VAL n 1 215 LEU n 1 216 LEU n 1 217 THR n 1 218 GLY n 1 219 ASN n 1 220 HIS n 1 221 GLY n 1 222 GLU n 1 223 ILE n 1 224 GLU n 1 225 LYS n 1 226 TRP n 1 227 ARG n 1 228 ARG n 1 229 ASN n 1 230 ALA n 1 231 SER n 1 232 LEU n 1 233 SER n 1 234 ILE n 1 235 THR n 1 236 ALA n 1 237 ALA n 1 238 ARG n 1 239 ARG n 1 240 PRO n 1 241 ASP n 1 242 LEU n 1 243 LEU n 1 244 LYS n 1 245 ASP n 1 246 ARG n 1 247 TYR n 1 248 GLY n 1 249 GLU n 1 250 ASN n 1 251 ASP n 1 252 VAL n 1 253 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'APH_1267, trmD' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain HZ _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Anaplasma phagocytophilum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 212042 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pAVA0421 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TRMD_ANAPZ _struct_ref.pdbx_db_accession Q2GIL5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MIFNVLTIFPQMFPGPLGVSNLGSALKKGLWTLNVFDIRAFANNKHNTVDDTPYGGGPGMLLRADVLGRCIDEVLSLHPN TKLMFTSPRGVSFTQDIARQTMNFDNITLLCGRFEGIDERVVDFYKLQEVSIGDYVLSGGELAAMVIIDTCVRMVPGVIG NAESLKQESMEGSLEYPQYTRPASWKGMEVPEVLLTGNHGEIEKWRRNASLSITAARRPDLLKDRYGENDVE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4IG6 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 22 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 253 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q2GIL5 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 232 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 232 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4IG6 MET A 1 ? UNP Q2GIL5 ? ? 'expression tag' -20 1 1 4IG6 ALA A 2 ? UNP Q2GIL5 ? ? 'expression tag' -19 2 1 4IG6 HIS A 3 ? UNP Q2GIL5 ? ? 'expression tag' -18 3 1 4IG6 HIS A 4 ? UNP Q2GIL5 ? ? 'expression tag' -17 4 1 4IG6 HIS A 5 ? UNP Q2GIL5 ? ? 'expression tag' -16 5 1 4IG6 HIS A 6 ? UNP Q2GIL5 ? ? 'expression tag' -15 6 1 4IG6 HIS A 7 ? UNP Q2GIL5 ? ? 'expression tag' -14 7 1 4IG6 HIS A 8 ? UNP Q2GIL5 ? ? 'expression tag' -13 8 1 4IG6 MET A 9 ? UNP Q2GIL5 ? ? 'expression tag' -12 9 1 4IG6 GLY A 10 ? UNP Q2GIL5 ? ? 'expression tag' -11 10 1 4IG6 THR A 11 ? UNP Q2GIL5 ? ? 'expression tag' -10 11 1 4IG6 LEU A 12 ? UNP Q2GIL5 ? ? 'expression tag' -9 12 1 4IG6 GLU A 13 ? UNP Q2GIL5 ? ? 'expression tag' -8 13 1 4IG6 ALA A 14 ? UNP Q2GIL5 ? ? 'expression tag' -7 14 1 4IG6 GLN A 15 ? UNP Q2GIL5 ? ? 'expression tag' -6 15 1 4IG6 THR A 16 ? UNP Q2GIL5 ? ? 'expression tag' -5 16 1 4IG6 GLN A 17 ? UNP Q2GIL5 ? ? 'expression tag' -4 17 1 4IG6 GLY A 18 ? UNP Q2GIL5 ? ? 'expression tag' -3 18 1 4IG6 PRO A 19 ? UNP Q2GIL5 ? ? 'expression tag' -2 19 1 4IG6 GLY A 20 ? UNP Q2GIL5 ? ? 'expression tag' -1 20 1 4IG6 SER A 21 ? UNP Q2GIL5 ? ? 'expression tag' 0 21 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAH 'L-peptide linking' n S-ADENOSYL-L-HOMOCYSTEINE ? 'C14 H20 N6 O5 S' 384.411 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4IG6 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 4.54 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 72.89 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;AnphA.00316.a.A1 PS00323 at 21 mg/mL with 3 mM SAH against JCSG+ A4: 30% MPD, 20 mM calcium chloride, 0.1 M sodium acetate, pH 4.6, VAPOR DIFFUSION, SITTING DROP, temperature 289K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU SATURN 944+' _diffrn_detector.pdbx_collection_date 2012-11-24 _diffrn_detector.details VariMax # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E+ SUPERBRIGHT' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 4IG6 _reflns.d_resolution_high 2.400 _reflns.number_obs 20785 _reflns.pdbx_Rmerge_I_obs 0.082 _reflns.pdbx_netI_over_sigmaI 20.95 _reflns.percent_possible_obs 99.7 _reflns.B_iso_Wilson_estimate 40.675 _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.number_all 20842 _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 7.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.400 2.460 11296 ? 1501 0.536 4.310 ? ? ? ? ? 99.9 1 1 2.460 2.530 11105 ? 1477 0.450 5.060 ? ? ? ? ? 99.9 2 1 2.530 2.600 10752 ? 1420 0.386 5.840 ? ? ? ? ? 99.7 3 1 2.600 2.680 10502 ? 1390 0.354 6.400 ? ? ? ? ? 99.9 4 1 2.680 2.770 10221 ? 1350 0.275 7.550 ? ? ? ? ? 99.8 5 1 2.770 2.870 10013 ? 1318 0.210 9.420 ? ? ? ? ? 100.0 6 1 2.870 2.980 9620 ? 1266 0.169 11.220 ? ? ? ? ? 100.0 7 1 2.980 3.100 9201 ? 1212 0.154 12.740 ? ? ? ? ? 100.0 8 1 3.100 3.240 8774 ? 1165 0.124 15.450 ? ? ? ? ? 99.8 9 1 3.240 3.390 8609 ? 1133 0.085 19.260 ? ? ? ? ? 99.9 10 1 3.390 3.580 8106 ? 1067 0.069 25.300 ? ? ? ? ? 100.0 11 1 3.580 3.790 7709 ? 1017 0.054 33.390 ? ? ? ? ? 99.8 12 1 3.790 4.060 7252 ? 964 0.047 37.290 ? ? ? ? ? 100.0 13 1 4.060 4.380 6795 ? 913 0.041 43.300 ? ? ? ? ? 99.9 14 1 4.380 4.800 6161 ? 826 0.034 52.570 ? ? ? ? ? 99.9 15 1 4.800 5.370 5554 ? 759 0.038 46.120 ? ? ? ? ? 99.7 16 1 5.370 6.200 4954 ? 688 0.043 39.420 ? ? ? ? ? 99.6 17 1 6.200 7.590 4173 ? 579 0.043 38.320 ? ? ? ? ? 99.7 18 1 7.590 10.730 3246 ? 468 0.022 62.760 ? ? ? ? ? 98.3 19 1 10.730 ? 1630 ? 272 0.020 68.670 ? ? ? ? ? 92.2 20 1 # _refine.entry_id 4IG6 _refine.ls_d_res_high 2.400 _refine.ls_d_res_low 41.92 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.8 _refine.ls_number_reflns_obs 20749 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;U VALUES : WITH TLS ADDED HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1767 _refine.ls_R_factor_R_work 0.1752 _refine.ls_wR_factor_R_work 0.1452 _refine.ls_R_factor_R_free 0.2037 _refine.ls_wR_factor_R_free 0.1690 _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 1064 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 35.5847 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.7100 _refine.aniso_B[2][2] -0.7100 _refine.aniso_B[3][3] 1.4100 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9550 _refine.correlation_coeff_Fo_to_Fc_free 0.9320 _refine.overall_SU_R_Cruickshank_DPI 0.1706 _refine.overall_SU_R_free 0.1551 _refine.pdbx_overall_ESU_R 0.1710 _refine.pdbx_overall_ESU_R_Free 0.1550 _refine.overall_SU_ML 0.0930 _refine.overall_SU_B 7.5970 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRY 3KNU' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8811 _refine.B_iso_max 106.310 _refine.B_iso_min 19.030 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1716 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 141 _refine_hist.number_atoms_total 1885 _refine_hist.d_res_high 2.400 _refine_hist.d_res_low 41.92 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1807 0.010 0.019 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1732 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2458 1.422 1.991 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 3983 0.744 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 230 4.942 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 78 37.633 23.590 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 304 15.345 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 15 16.671 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 278 0.067 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2048 0.006 0.021 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 409 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 902 1.994 2.804 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 901 1.994 2.804 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1126 3.358 4.191 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.400 _refine_ls_shell.d_res_low 2.462 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.8 _refine_ls_shell.number_reflns_R_work 1419 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2220 _refine_ls_shell.R_factor_R_free 0.3010 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 74 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1493 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4IG6 _struct.title 'Crystal structure of a tRNA (guanine-N1)-methyltransferase from Anaplasma phagocytophilum bound to S-adenosylhomocysteine' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4IG6 _struct_keywords.pdbx_keywords 'TRANSFERASE/TRANSFERASE INHIBITOR' _struct_keywords.text ;Structural Genomics, NIAID, National Institute of Allergy and Infectious Diseases, Seattle Structural Genomics Center for Infectious Disease, SSGCID, tRNA modification, S-adenosyl methionine-dependent, SAM, SAH, S-adenosyl homocysteine, natural inhibitor, tRNA, M1G, G37, TRANSFERASE-TRANSFERASE INHIBITOR complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 30 ? PHE A 34 ? PHE A 9 PHE A 13 5 ? 5 HELX_P HELX_P2 2 PRO A 35 ? GLY A 39 ? PRO A 14 GLY A 18 5 ? 5 HELX_P HELX_P3 3 VAL A 40 ? GLY A 50 ? VAL A 19 GLY A 29 1 ? 11 HELX_P HELX_P4 4 ARG A 60 ? ALA A 63 ? ARG A 39 ALA A 42 5 ? 4 HELX_P HELX_P5 5 ARG A 84 ? HIS A 99 ? ARG A 63 HIS A 78 1 ? 16 HELX_P HELX_P6 6 THR A 115 ? ASN A 124 ? THR A 94 ASN A 103 1 ? 10 HELX_P HELX_P7 7 ASP A 139 ? TYR A 146 ? ASP A 118 TYR A 125 1 ? 8 HELX_P HELX_P8 8 GLY A 161 ? ARG A 174 ? GLY A 140 ARG A 153 1 ? 14 HELX_P HELX_P9 9 GLY A 181 ? GLU A 192 ? GLY A 160 GLU A 171 1 ? 12 HELX_P HELX_P10 10 PRO A 212 ? THR A 217 ? PRO A 191 THR A 196 5 ? 6 HELX_P HELX_P11 11 ASN A 219 ? ARG A 239 ? ASN A 198 ARG A 218 1 ? 21 HELX_P HELX_P12 12 PRO A 240 ? LEU A 243 ? PRO A 219 LEU A 222 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PHE 34 A . ? PHE 13 A PRO 35 A ? PRO 14 A 1 -3.15 2 ARG 202 A . ? ARG 181 A PRO 203 A ? PRO 182 A 1 3.20 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 53 ? ASP A 58 ? THR A 32 ASP A 37 A 2 ILE A 23 ? THR A 28 ? ILE A 2 THR A 7 A 3 ASN A 127 ? LEU A 131 ? ASN A 106 LEU A 110 A 4 LYS A 103 ? THR A 107 ? LYS A 82 THR A 86 A 5 GLN A 149 ? SER A 152 ? GLN A 128 SER A 131 A 6 VAL A 112 ? SER A 113 ? VAL A 91 SER A 92 B 1 ASP A 71 ? ASP A 72 ? ASP A 50 ASP A 51 B 2 LEU A 82 ? LEU A 83 ? LEU A 61 LEU A 62 C 1 SER A 205 ? TRP A 206 ? SER A 184 TRP A 185 C 2 MET A 209 ? GLU A 210 ? MET A 188 GLU A 189 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ASN A 55 ? O ASN A 34 N VAL A 26 ? N VAL A 5 A 2 3 N ASN A 25 ? N ASN A 4 O LEU A 130 ? O LEU A 109 A 3 4 O THR A 129 ? O THR A 108 N MET A 105 ? N MET A 84 A 4 5 N PHE A 106 ? N PHE A 85 O GLN A 149 ? O GLN A 128 A 5 6 O SER A 152 ? O SER A 131 N VAL A 112 ? N VAL A 91 B 1 2 N ASP A 72 ? N ASP A 51 O LEU A 82 ? O LEU A 61 C 1 2 N TRP A 206 ? N TRP A 185 O MET A 209 ? O MET A 188 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SAH 301 ? 24 'BINDING SITE FOR RESIDUE SAH A 301' AC2 Software A CL 302 ? 4 'BINDING SITE FOR RESIDUE CL A 302' AC3 Software A CL 303 ? 4 'BINDING SITE FOR RESIDUE CL A 303' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 24 THR A 107 ? THR A 86 . ? 1_555 ? 2 AC1 24 SER A 108 ? SER A 87 . ? 1_555 ? 3 AC1 24 PRO A 109 ? PRO A 88 . ? 1_555 ? 4 AC1 24 GLY A 133 ? GLY A 112 . ? 1_555 ? 5 AC1 24 PHE A 135 ? PHE A 114 . ? 1_555 ? 6 AC1 24 GLU A 136 ? GLU A 115 . ? 1_555 ? 7 AC1 24 GLY A 137 ? GLY A 116 . ? 1_555 ? 8 AC1 24 VAL A 151 ? VAL A 130 . ? 1_555 ? 9 AC1 24 SER A 152 ? SER A 131 . ? 1_555 ? 10 AC1 24 ILE A 153 ? ILE A 132 . ? 1_555 ? 11 AC1 24 GLY A 154 ? GLY A 133 . ? 1_555 ? 12 AC1 24 TYR A 156 ? TYR A 135 . ? 1_555 ? 13 AC1 24 LEU A 158 ? LEU A 137 . ? 1_555 ? 14 AC1 24 GLY A 160 ? GLY A 139 . ? 1_555 ? 15 AC1 24 GLY A 161 ? GLY A 140 . ? 1_555 ? 16 AC1 24 ALA A 164 ? ALA A 143 . ? 1_555 ? 17 AC1 24 GLN A 188 ? GLN A 167 . ? 8_554 ? 18 AC1 24 GLU A 196 ? GLU A 175 . ? 8_554 ? 19 AC1 24 HOH E . ? HOH A 407 . ? 1_555 ? 20 AC1 24 HOH E . ? HOH A 460 . ? 1_555 ? 21 AC1 24 HOH E . ? HOH A 506 . ? 8_554 ? 22 AC1 24 HOH E . ? HOH A 507 . ? 8_554 ? 23 AC1 24 HOH E . ? HOH A 516 . ? 1_555 ? 24 AC1 24 HOH E . ? HOH A 519 . ? 1_555 ? 25 AC2 4 PHE A 30 ? PHE A 9 . ? 1_555 ? 26 AC2 4 PRO A 31 ? PRO A 10 . ? 1_555 ? 27 AC2 4 GLN A 32 ? GLN A 11 . ? 1_555 ? 28 AC2 4 HOH E . ? HOH A 470 . ? 1_555 ? 29 AC3 4 HIS A 99 ? HIS A 78 . ? 1_555 ? 30 AC3 4 ASN A 101 ? ASN A 80 . ? 1_555 ? 31 AC3 4 THR A 102 ? THR A 81 . ? 1_555 ? 32 AC3 4 HOH E . ? HOH A 491 . ? 1_555 ? # _atom_sites.entry_id 4IG6 _atom_sites.fract_transf_matrix[1][1] 0.009514 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009514 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010840 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -20 ? ? ? A . n A 1 2 ALA 2 -19 ? ? ? A . n A 1 3 HIS 3 -18 ? ? ? A . n A 1 4 HIS 4 -17 ? ? ? A . n A 1 5 HIS 5 -16 ? ? ? A . n A 1 6 HIS 6 -15 ? ? ? A . n A 1 7 HIS 7 -14 ? ? ? A . n A 1 8 HIS 8 -13 ? ? ? A . n A 1 9 MET 9 -12 ? ? ? A . n A 1 10 GLY 10 -11 ? ? ? A . n A 1 11 THR 11 -10 ? ? ? A . n A 1 12 LEU 12 -9 ? ? ? A . n A 1 13 GLU 13 -8 ? ? ? A . n A 1 14 ALA 14 -7 ? ? ? A . n A 1 15 GLN 15 -6 ? ? ? A . n A 1 16 THR 16 -5 ? ? ? A . n A 1 17 GLN 17 -4 ? ? ? A . n A 1 18 GLY 18 -3 ? ? ? A . n A 1 19 PRO 19 -2 ? ? ? A . n A 1 20 GLY 20 -1 ? ? ? A . n A 1 21 SER 21 0 0 SER SER A . n A 1 22 MET 22 1 1 MET MET A . n A 1 23 ILE 23 2 2 ILE ILE A . n A 1 24 PHE 24 3 3 PHE PHE A . n A 1 25 ASN 25 4 4 ASN ASN A . n A 1 26 VAL 26 5 5 VAL VAL A . n A 1 27 LEU 27 6 6 LEU LEU A . n A 1 28 THR 28 7 7 THR THR A . n A 1 29 ILE 29 8 8 ILE ILE A . n A 1 30 PHE 30 9 9 PHE PHE A . n A 1 31 PRO 31 10 10 PRO PRO A . n A 1 32 GLN 32 11 11 GLN GLN A . n A 1 33 MET 33 12 12 MET MET A . n A 1 34 PHE 34 13 13 PHE PHE A . n A 1 35 PRO 35 14 14 PRO PRO A . n A 1 36 GLY 36 15 15 GLY GLY A . n A 1 37 PRO 37 16 16 PRO PRO A . n A 1 38 LEU 38 17 17 LEU LEU A . n A 1 39 GLY 39 18 18 GLY GLY A . n A 1 40 VAL 40 19 19 VAL VAL A . n A 1 41 SER 41 20 20 SER SER A . n A 1 42 ASN 42 21 21 ASN ASN A . n A 1 43 LEU 43 22 22 LEU LEU A . n A 1 44 GLY 44 23 23 GLY GLY A . n A 1 45 SER 45 24 24 SER SER A . n A 1 46 ALA 46 25 25 ALA ALA A . n A 1 47 LEU 47 26 26 LEU LEU A . n A 1 48 LYS 48 27 27 LYS LYS A . n A 1 49 LYS 49 28 28 LYS LYS A . n A 1 50 GLY 50 29 29 GLY GLY A . n A 1 51 LEU 51 30 30 LEU LEU A . n A 1 52 TRP 52 31 31 TRP TRP A . n A 1 53 THR 53 32 32 THR THR A . n A 1 54 LEU 54 33 33 LEU LEU A . n A 1 55 ASN 55 34 34 ASN ASN A . n A 1 56 VAL 56 35 35 VAL VAL A . n A 1 57 PHE 57 36 36 PHE PHE A . n A 1 58 ASP 58 37 37 ASP ASP A . n A 1 59 ILE 59 38 38 ILE ILE A . n A 1 60 ARG 60 39 39 ARG ARG A . n A 1 61 ALA 61 40 40 ALA ALA A . n A 1 62 PHE 62 41 41 PHE PHE A . n A 1 63 ALA 63 42 42 ALA ALA A . n A 1 64 ASN 64 43 43 ASN ASN A . n A 1 65 ASN 65 44 44 ASN ASN A . n A 1 66 LYS 66 45 45 LYS LYS A . n A 1 67 HIS 67 46 46 HIS HIS A . n A 1 68 ASN 68 47 47 ASN ASN A . n A 1 69 THR 69 48 48 THR THR A . n A 1 70 VAL 70 49 49 VAL VAL A . n A 1 71 ASP 71 50 50 ASP ASP A . n A 1 72 ASP 72 51 51 ASP ASP A . n A 1 73 THR 73 52 52 THR THR A . n A 1 74 PRO 74 53 53 PRO PRO A . n A 1 75 TYR 75 54 54 TYR TYR A . n A 1 76 GLY 76 55 55 GLY GLY A . n A 1 77 GLY 77 56 56 GLY GLY A . n A 1 78 GLY 78 57 57 GLY GLY A . n A 1 79 PRO 79 58 58 PRO PRO A . n A 1 80 GLY 80 59 59 GLY GLY A . n A 1 81 MET 81 60 60 MET MET A . n A 1 82 LEU 82 61 61 LEU LEU A . n A 1 83 LEU 83 62 62 LEU LEU A . n A 1 84 ARG 84 63 63 ARG ARG A . n A 1 85 ALA 85 64 64 ALA ALA A . n A 1 86 ASP 86 65 65 ASP ASP A . n A 1 87 VAL 87 66 66 VAL VAL A . n A 1 88 LEU 88 67 67 LEU LEU A . n A 1 89 GLY 89 68 68 GLY GLY A . n A 1 90 ARG 90 69 69 ARG ARG A . n A 1 91 CYS 91 70 70 CYS CYS A . n A 1 92 ILE 92 71 71 ILE ILE A . n A 1 93 ASP 93 72 72 ASP ASP A . n A 1 94 GLU 94 73 73 GLU GLU A . n A 1 95 VAL 95 74 74 VAL VAL A . n A 1 96 LEU 96 75 75 LEU LEU A . n A 1 97 SER 97 76 76 SER SER A . n A 1 98 LEU 98 77 77 LEU LEU A . n A 1 99 HIS 99 78 78 HIS HIS A . n A 1 100 PRO 100 79 79 PRO PRO A . n A 1 101 ASN 101 80 80 ASN ASN A . n A 1 102 THR 102 81 81 THR THR A . n A 1 103 LYS 103 82 82 LYS LYS A . n A 1 104 LEU 104 83 83 LEU LEU A . n A 1 105 MET 105 84 84 MET MET A . n A 1 106 PHE 106 85 85 PHE PHE A . n A 1 107 THR 107 86 86 THR THR A . n A 1 108 SER 108 87 87 SER SER A . n A 1 109 PRO 109 88 88 PRO PRO A . n A 1 110 ARG 110 89 89 ARG ARG A . n A 1 111 GLY 111 90 90 GLY GLY A . n A 1 112 VAL 112 91 91 VAL VAL A . n A 1 113 SER 113 92 92 SER SER A . n A 1 114 PHE 114 93 93 PHE PHE A . n A 1 115 THR 115 94 94 THR THR A . n A 1 116 GLN 116 95 95 GLN GLN A . n A 1 117 ASP 117 96 96 ASP ASP A . n A 1 118 ILE 118 97 97 ILE ILE A . n A 1 119 ALA 119 98 98 ALA ALA A . n A 1 120 ARG 120 99 99 ARG ARG A . n A 1 121 GLN 121 100 100 GLN GLN A . n A 1 122 THR 122 101 101 THR THR A . n A 1 123 MET 123 102 102 MET MET A . n A 1 124 ASN 124 103 103 ASN ASN A . n A 1 125 PHE 125 104 104 PHE PHE A . n A 1 126 ASP 126 105 105 ASP ASP A . n A 1 127 ASN 127 106 106 ASN ASN A . n A 1 128 ILE 128 107 107 ILE ILE A . n A 1 129 THR 129 108 108 THR THR A . n A 1 130 LEU 130 109 109 LEU LEU A . n A 1 131 LEU 131 110 110 LEU LEU A . n A 1 132 CYS 132 111 111 CYS CYS A . n A 1 133 GLY 133 112 112 GLY GLY A . n A 1 134 ARG 134 113 113 ARG ARG A . n A 1 135 PHE 135 114 114 PHE PHE A . n A 1 136 GLU 136 115 115 GLU GLU A . n A 1 137 GLY 137 116 116 GLY GLY A . n A 1 138 ILE 138 117 117 ILE ILE A . n A 1 139 ASP 139 118 118 ASP ASP A . n A 1 140 GLU 140 119 119 GLU GLU A . n A 1 141 ARG 141 120 120 ARG ARG A . n A 1 142 VAL 142 121 121 VAL VAL A . n A 1 143 VAL 143 122 122 VAL VAL A . n A 1 144 ASP 144 123 123 ASP ASP A . n A 1 145 PHE 145 124 124 PHE PHE A . n A 1 146 TYR 146 125 125 TYR TYR A . n A 1 147 LYS 147 126 126 LYS LYS A . n A 1 148 LEU 148 127 127 LEU LEU A . n A 1 149 GLN 149 128 128 GLN GLN A . n A 1 150 GLU 150 129 129 GLU GLU A . n A 1 151 VAL 151 130 130 VAL VAL A . n A 1 152 SER 152 131 131 SER SER A . n A 1 153 ILE 153 132 132 ILE ILE A . n A 1 154 GLY 154 133 133 GLY GLY A . n A 1 155 ASP 155 134 134 ASP ASP A . n A 1 156 TYR 156 135 135 TYR TYR A . n A 1 157 VAL 157 136 136 VAL VAL A . n A 1 158 LEU 158 137 137 LEU LEU A . n A 1 159 SER 159 138 138 SER SER A . n A 1 160 GLY 160 139 139 GLY GLY A . n A 1 161 GLY 161 140 140 GLY GLY A . n A 1 162 GLU 162 141 141 GLU GLU A . n A 1 163 LEU 163 142 142 LEU LEU A . n A 1 164 ALA 164 143 143 ALA ALA A . n A 1 165 ALA 165 144 144 ALA ALA A . n A 1 166 MET 166 145 145 MET MET A . n A 1 167 VAL 167 146 146 VAL VAL A . n A 1 168 ILE 168 147 147 ILE ILE A . n A 1 169 ILE 169 148 148 ILE ILE A . n A 1 170 ASP 170 149 149 ASP ASP A . n A 1 171 THR 171 150 150 THR THR A . n A 1 172 CYS 172 151 151 CYS CYS A . n A 1 173 VAL 173 152 152 VAL VAL A . n A 1 174 ARG 174 153 153 ARG ARG A . n A 1 175 MET 175 154 154 MET MET A . n A 1 176 VAL 176 155 155 VAL VAL A . n A 1 177 PRO 177 156 156 PRO PRO A . n A 1 178 GLY 178 157 157 GLY GLY A . n A 1 179 VAL 179 158 158 VAL VAL A . n A 1 180 ILE 180 159 159 ILE ILE A . n A 1 181 GLY 181 160 160 GLY GLY A . n A 1 182 ASN 182 161 161 ASN ASN A . n A 1 183 ALA 183 162 162 ALA ALA A . n A 1 184 GLU 184 163 163 GLU GLU A . n A 1 185 SER 185 164 164 SER SER A . n A 1 186 LEU 186 165 165 LEU LEU A . n A 1 187 LYS 187 166 166 LYS LYS A . n A 1 188 GLN 188 167 167 GLN GLN A . n A 1 189 GLU 189 168 168 GLU GLU A . n A 1 190 SER 190 169 169 SER SER A . n A 1 191 MET 191 170 170 MET MET A . n A 1 192 GLU 192 171 171 GLU GLU A . n A 1 193 GLY 193 172 172 GLY GLY A . n A 1 194 SER 194 173 173 SER SER A . n A 1 195 LEU 195 174 174 LEU LEU A . n A 1 196 GLU 196 175 175 GLU GLU A . n A 1 197 TYR 197 176 176 TYR TYR A . n A 1 198 PRO 198 177 177 PRO PRO A . n A 1 199 GLN 199 178 178 GLN GLN A . n A 1 200 TYR 200 179 179 TYR TYR A . n A 1 201 THR 201 180 180 THR THR A . n A 1 202 ARG 202 181 181 ARG ARG A . n A 1 203 PRO 203 182 182 PRO PRO A . n A 1 204 ALA 204 183 183 ALA ALA A . n A 1 205 SER 205 184 184 SER SER A . n A 1 206 TRP 206 185 185 TRP TRP A . n A 1 207 LYS 207 186 186 LYS LYS A . n A 1 208 GLY 208 187 187 GLY GLY A . n A 1 209 MET 209 188 188 MET MET A . n A 1 210 GLU 210 189 189 GLU GLU A . n A 1 211 VAL 211 190 190 VAL VAL A . n A 1 212 PRO 212 191 191 PRO PRO A . n A 1 213 GLU 213 192 192 GLU GLU A . n A 1 214 VAL 214 193 193 VAL VAL A . n A 1 215 LEU 215 194 194 LEU LEU A . n A 1 216 LEU 216 195 195 LEU LEU A . n A 1 217 THR 217 196 196 THR THR A . n A 1 218 GLY 218 197 197 GLY GLY A . n A 1 219 ASN 219 198 198 ASN ASN A . n A 1 220 HIS 220 199 199 HIS HIS A . n A 1 221 GLY 221 200 200 GLY GLY A . n A 1 222 GLU 222 201 201 GLU GLU A . n A 1 223 ILE 223 202 202 ILE ILE A . n A 1 224 GLU 224 203 203 GLU GLU A . n A 1 225 LYS 225 204 204 LYS LYS A . n A 1 226 TRP 226 205 205 TRP TRP A . n A 1 227 ARG 227 206 206 ARG ARG A . n A 1 228 ARG 228 207 207 ARG ARG A . n A 1 229 ASN 229 208 208 ASN ASN A . n A 1 230 ALA 230 209 209 ALA ALA A . n A 1 231 SER 231 210 210 SER SER A . n A 1 232 LEU 232 211 211 LEU LEU A . n A 1 233 SER 233 212 212 SER SER A . n A 1 234 ILE 234 213 213 ILE ILE A . n A 1 235 THR 235 214 214 THR THR A . n A 1 236 ALA 236 215 215 ALA ALA A . n A 1 237 ALA 237 216 216 ALA ALA A . n A 1 238 ARG 238 217 217 ARG ARG A . n A 1 239 ARG 239 218 218 ARG ARG A . n A 1 240 PRO 240 219 219 PRO PRO A . n A 1 241 ASP 241 220 220 ASP ASP A . n A 1 242 LEU 242 221 221 LEU LEU A . n A 1 243 LEU 243 222 222 LEU LEU A . n A 1 244 LYS 244 223 ? ? ? A . n A 1 245 ASP 245 224 ? ? ? A . n A 1 246 ARG 246 225 ? ? ? A . n A 1 247 TYR 247 226 ? ? ? A . n A 1 248 GLY 248 227 ? ? ? A . n A 1 249 GLU 249 228 ? ? ? A . n A 1 250 ASN 250 229 ? ? ? A . n A 1 251 ASP 251 230 ? ? ? A . n A 1 252 VAL 252 231 ? ? ? A . n A 1 253 GLU 253 232 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NIAID, National Institute of Allergy and Infectious Diseases' _pdbx_SG_project.full_name_of_center 'Seattle Structural Genomics Center for Infectious Disease' _pdbx_SG_project.initial_of_center SSGCID # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SAH 1 301 225 SAH SAH A . C 3 CL 1 302 1 CL CL A . D 3 CL 1 303 2 CL CL A . E 4 HOH 1 401 1 HOH HOH A . E 4 HOH 2 402 2 HOH HOH A . E 4 HOH 3 403 3 HOH HOH A . E 4 HOH 4 404 4 HOH HOH A . E 4 HOH 5 405 5 HOH HOH A . E 4 HOH 6 406 6 HOH HOH A . E 4 HOH 7 407 7 HOH HOH A . E 4 HOH 8 408 8 HOH HOH A . E 4 HOH 9 409 9 HOH HOH A . E 4 HOH 10 410 10 HOH HOH A . E 4 HOH 11 411 11 HOH HOH A . E 4 HOH 12 412 12 HOH HOH A . E 4 HOH 13 413 13 HOH HOH A . E 4 HOH 14 414 14 HOH HOH A . E 4 HOH 15 415 15 HOH HOH A . E 4 HOH 16 416 16 HOH HOH A . E 4 HOH 17 417 17 HOH HOH A . E 4 HOH 18 418 18 HOH HOH A . E 4 HOH 19 419 19 HOH HOH A . E 4 HOH 20 420 20 HOH HOH A . E 4 HOH 21 421 21 HOH HOH A . E 4 HOH 22 422 22 HOH HOH A . E 4 HOH 23 423 23 HOH HOH A . E 4 HOH 24 424 24 HOH HOH A . E 4 HOH 25 425 25 HOH HOH A . E 4 HOH 26 426 26 HOH HOH A . E 4 HOH 27 427 27 HOH HOH A . E 4 HOH 28 428 28 HOH HOH A . E 4 HOH 29 429 29 HOH HOH A . E 4 HOH 30 430 30 HOH HOH A . E 4 HOH 31 431 31 HOH HOH A . E 4 HOH 32 432 32 HOH HOH A . E 4 HOH 33 433 33 HOH HOH A . E 4 HOH 34 434 34 HOH HOH A . E 4 HOH 35 435 35 HOH HOH A . E 4 HOH 36 436 36 HOH HOH A . E 4 HOH 37 437 37 HOH HOH A . E 4 HOH 38 438 38 HOH HOH A . E 4 HOH 39 439 39 HOH HOH A . E 4 HOH 40 440 40 HOH HOH A . E 4 HOH 41 441 41 HOH HOH A . E 4 HOH 42 442 42 HOH HOH A . E 4 HOH 43 443 43 HOH HOH A . E 4 HOH 44 444 44 HOH HOH A . E 4 HOH 45 445 45 HOH HOH A . E 4 HOH 46 446 46 HOH HOH A . E 4 HOH 47 447 47 HOH HOH A . E 4 HOH 48 448 48 HOH HOH A . E 4 HOH 49 449 49 HOH HOH A . E 4 HOH 50 450 50 HOH HOH A . E 4 HOH 51 451 51 HOH HOH A . E 4 HOH 52 452 52 HOH HOH A . E 4 HOH 53 453 53 HOH HOH A . E 4 HOH 54 454 54 HOH HOH A . E 4 HOH 55 455 55 HOH HOH A . E 4 HOH 56 456 56 HOH HOH A . E 4 HOH 57 457 57 HOH HOH A . E 4 HOH 58 458 58 HOH HOH A . E 4 HOH 59 459 59 HOH HOH A . E 4 HOH 60 460 60 HOH HOH A . E 4 HOH 61 461 61 HOH HOH A . E 4 HOH 62 462 62 HOH HOH A . E 4 HOH 63 463 63 HOH HOH A . E 4 HOH 64 464 64 HOH HOH A . E 4 HOH 65 465 65 HOH HOH A . E 4 HOH 66 466 66 HOH HOH A . E 4 HOH 67 467 67 HOH HOH A . E 4 HOH 68 468 68 HOH HOH A . E 4 HOH 69 469 69 HOH HOH A . E 4 HOH 70 470 70 HOH HOH A . E 4 HOH 71 471 71 HOH HOH A . E 4 HOH 72 472 72 HOH HOH A . E 4 HOH 73 473 73 HOH HOH A . E 4 HOH 74 474 74 HOH HOH A . E 4 HOH 75 475 75 HOH HOH A . E 4 HOH 76 476 76 HOH HOH A . E 4 HOH 77 477 77 HOH HOH A . E 4 HOH 78 478 78 HOH HOH A . E 4 HOH 79 479 79 HOH HOH A . E 4 HOH 80 480 80 HOH HOH A . E 4 HOH 81 481 81 HOH HOH A . E 4 HOH 82 482 82 HOH HOH A . E 4 HOH 83 483 83 HOH HOH A . E 4 HOH 84 484 84 HOH HOH A . E 4 HOH 85 485 85 HOH HOH A . E 4 HOH 86 486 86 HOH HOH A . E 4 HOH 87 487 87 HOH HOH A . E 4 HOH 88 488 88 HOH HOH A . E 4 HOH 89 489 89 HOH HOH A . E 4 HOH 90 490 90 HOH HOH A . E 4 HOH 91 491 91 HOH HOH A . E 4 HOH 92 492 92 HOH HOH A . E 4 HOH 93 493 93 HOH HOH A . E 4 HOH 94 494 94 HOH HOH A . E 4 HOH 95 495 95 HOH HOH A . E 4 HOH 96 496 96 HOH HOH A . E 4 HOH 97 497 97 HOH HOH A . E 4 HOH 98 498 98 HOH HOH A . E 4 HOH 99 499 99 HOH HOH A . E 4 HOH 100 500 100 HOH HOH A . E 4 HOH 101 501 101 HOH HOH A . E 4 HOH 102 502 102 HOH HOH A . E 4 HOH 103 503 103 HOH HOH A . E 4 HOH 104 504 104 HOH HOH A . E 4 HOH 105 505 105 HOH HOH A . E 4 HOH 106 506 106 HOH HOH A . E 4 HOH 107 507 107 HOH HOH A . E 4 HOH 108 508 108 HOH HOH A . E 4 HOH 109 509 109 HOH HOH A . E 4 HOH 110 510 110 HOH HOH A . E 4 HOH 111 511 111 HOH HOH A . E 4 HOH 112 512 112 HOH HOH A . E 4 HOH 113 513 113 HOH HOH A . E 4 HOH 114 514 114 HOH HOH A . E 4 HOH 115 515 115 HOH HOH A . E 4 HOH 116 516 116 HOH HOH A . E 4 HOH 117 517 117 HOH HOH A . E 4 HOH 118 518 118 HOH HOH A . E 4 HOH 119 519 119 HOH HOH A . E 4 HOH 120 520 120 HOH HOH A . E 4 HOH 121 521 121 HOH HOH A . E 4 HOH 122 522 122 HOH HOH A . E 4 HOH 123 523 123 HOH HOH A . E 4 HOH 124 524 124 HOH HOH A . E 4 HOH 125 525 125 HOH HOH A . E 4 HOH 126 526 126 HOH HOH A . E 4 HOH 127 527 127 HOH HOH A . E 4 HOH 128 528 128 HOH HOH A . E 4 HOH 129 529 129 HOH HOH A . E 4 HOH 130 530 130 HOH HOH A . E 4 HOH 131 531 131 HOH HOH A . E 4 HOH 132 532 132 HOH HOH A . E 4 HOH 133 533 133 HOH HOH A . E 4 HOH 134 534 134 HOH HOH A . E 4 HOH 135 535 135 HOH HOH A . E 4 HOH 136 536 136 HOH HOH A . E 4 HOH 137 537 137 HOH HOH A . E 4 HOH 138 538 138 HOH HOH A . E 4 HOH 139 539 139 HOH HOH A . E 4 HOH 140 540 140 HOH HOH A . E 4 HOH 141 541 141 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8200 ? 1 MORE -64 ? 1 'SSA (A^2)' 18340 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_554 -y,-x,-z-1/2 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -46.1250000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-12-26 2 'Structure model' 1 1 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' struct_ref_seq_dif 6 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_ref_seq_dif.details' 4 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -14.8063 _pdbx_refine_tls.origin_y 16.8591 _pdbx_refine_tls.origin_z -16.3539 _pdbx_refine_tls.T[1][1] 0.0279 _pdbx_refine_tls.T[2][2] 0.0659 _pdbx_refine_tls.T[3][3] 0.0452 _pdbx_refine_tls.T[1][2] 0.0269 _pdbx_refine_tls.T[1][3] 0.0261 _pdbx_refine_tls.T[2][3] 0.0310 _pdbx_refine_tls.L[1][1] 0.6652 _pdbx_refine_tls.L[2][2] 1.0721 _pdbx_refine_tls.L[3][3] 0.1376 _pdbx_refine_tls.L[1][2] 0.7874 _pdbx_refine_tls.L[1][3] -0.0428 _pdbx_refine_tls.L[2][3] -0.0229 _pdbx_refine_tls.S[1][1] 0.0058 _pdbx_refine_tls.S[2][2] -0.0557 _pdbx_refine_tls.S[3][3] 0.0499 _pdbx_refine_tls.S[1][2] -0.1044 _pdbx_refine_tls.S[1][3] -0.0477 _pdbx_refine_tls.S[2][3] -0.0562 _pdbx_refine_tls.S[2][1] 0.0161 _pdbx_refine_tls.S[3][1] 0.0015 _pdbx_refine_tls.S[3][2] 0.0241 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 0 A 222 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 A 301 A 301 ? . . . . ? # _pdbx_phasing_MR.entry_id 4IG6 _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 3.000 _pdbx_phasing_MR.d_res_low_rotation 41.880 _pdbx_phasing_MR.d_res_high_translation 3.000 _pdbx_phasing_MR.d_res_low_translation 41.880 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 PHASER 2.5.2 'Mon Oct 8 12:49:53 2012 (svn )' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 StructureStudio . ? ? ? ? 'data collection' ? ? ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 20 ? ? 59.86 -142.98 2 1 PHE A 114 ? ? 57.22 -134.94 3 1 LEU A 221 ? ? -66.33 22.66 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 45 ? CG ? A LYS 66 CG 2 1 Y 1 A LYS 45 ? CD ? A LYS 66 CD 3 1 Y 1 A LYS 45 ? CE ? A LYS 66 CE 4 1 Y 1 A LYS 45 ? NZ ? A LYS 66 NZ 5 1 Y 1 A HIS 46 ? CG ? A HIS 67 CG 6 1 Y 1 A HIS 46 ? ND1 ? A HIS 67 ND1 7 1 Y 1 A HIS 46 ? CD2 ? A HIS 67 CD2 8 1 Y 1 A HIS 46 ? CE1 ? A HIS 67 CE1 9 1 Y 1 A HIS 46 ? NE2 ? A HIS 67 NE2 10 1 Y 1 A ASN 47 ? CG ? A ASN 68 CG 11 1 Y 1 A ASN 47 ? OD1 ? A ASN 68 OD1 12 1 Y 1 A ASN 47 ? ND2 ? A ASN 68 ND2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -20 ? A MET 1 2 1 Y 1 A ALA -19 ? A ALA 2 3 1 Y 1 A HIS -18 ? A HIS 3 4 1 Y 1 A HIS -17 ? A HIS 4 5 1 Y 1 A HIS -16 ? A HIS 5 6 1 Y 1 A HIS -15 ? A HIS 6 7 1 Y 1 A HIS -14 ? A HIS 7 8 1 Y 1 A HIS -13 ? A HIS 8 9 1 Y 1 A MET -12 ? A MET 9 10 1 Y 1 A GLY -11 ? A GLY 10 11 1 Y 1 A THR -10 ? A THR 11 12 1 Y 1 A LEU -9 ? A LEU 12 13 1 Y 1 A GLU -8 ? A GLU 13 14 1 Y 1 A ALA -7 ? A ALA 14 15 1 Y 1 A GLN -6 ? A GLN 15 16 1 Y 1 A THR -5 ? A THR 16 17 1 Y 1 A GLN -4 ? A GLN 17 18 1 Y 1 A GLY -3 ? A GLY 18 19 1 Y 1 A PRO -2 ? A PRO 19 20 1 Y 1 A GLY -1 ? A GLY 20 21 1 Y 1 A LYS 223 ? A LYS 244 22 1 Y 1 A ASP 224 ? A ASP 245 23 1 Y 1 A ARG 225 ? A ARG 246 24 1 Y 1 A TYR 226 ? A TYR 247 25 1 Y 1 A GLY 227 ? A GLY 248 26 1 Y 1 A GLU 228 ? A GLU 249 27 1 Y 1 A ASN 229 ? A ASN 250 28 1 Y 1 A ASP 230 ? A ASP 251 29 1 Y 1 A VAL 231 ? A VAL 252 30 1 Y 1 A GLU 232 ? A GLU 253 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MET N N N N 231 MET CA C N S 232 MET C C N N 233 MET O O N N 234 MET CB C N N 235 MET CG C N N 236 MET SD S N N 237 MET CE C N N 238 MET OXT O N N 239 MET H H N N 240 MET H2 H N N 241 MET HA H N N 242 MET HB2 H N N 243 MET HB3 H N N 244 MET HG2 H N N 245 MET HG3 H N N 246 MET HE1 H N N 247 MET HE2 H N N 248 MET HE3 H N N 249 MET HXT H N N 250 PHE N N N N 251 PHE CA C N S 252 PHE C C N N 253 PHE O O N N 254 PHE CB C N N 255 PHE CG C Y N 256 PHE CD1 C Y N 257 PHE CD2 C Y N 258 PHE CE1 C Y N 259 PHE CE2 C Y N 260 PHE CZ C Y N 261 PHE OXT O N N 262 PHE H H N N 263 PHE H2 H N N 264 PHE HA H N N 265 PHE HB2 H N N 266 PHE HB3 H N N 267 PHE HD1 H N N 268 PHE HD2 H N N 269 PHE HE1 H N N 270 PHE HE2 H N N 271 PHE HZ H N N 272 PHE HXT H N N 273 PRO N N N N 274 PRO CA C N S 275 PRO C C N N 276 PRO O O N N 277 PRO CB C N N 278 PRO CG C N N 279 PRO CD C N N 280 PRO OXT O N N 281 PRO H H N N 282 PRO HA H N N 283 PRO HB2 H N N 284 PRO HB3 H N N 285 PRO HG2 H N N 286 PRO HG3 H N N 287 PRO HD2 H N N 288 PRO HD3 H N N 289 PRO HXT H N N 290 SAH N N N N 291 SAH CA C N S 292 SAH CB C N N 293 SAH CG C N N 294 SAH SD S N N 295 SAH C C N N 296 SAH O O N N 297 SAH OXT O N N 298 SAH "C5'" C N N 299 SAH "C4'" C N S 300 SAH "O4'" O N N 301 SAH "C3'" C N S 302 SAH "O3'" O N N 303 SAH "C2'" C N R 304 SAH "O2'" O N N 305 SAH "C1'" C N R 306 SAH N9 N Y N 307 SAH C8 C Y N 308 SAH N7 N Y N 309 SAH C5 C Y N 310 SAH C6 C Y N 311 SAH N6 N N N 312 SAH N1 N Y N 313 SAH C2 C Y N 314 SAH N3 N Y N 315 SAH C4 C Y N 316 SAH HN1 H N N 317 SAH HN2 H N N 318 SAH HA H N N 319 SAH HB1 H N N 320 SAH HB2 H N N 321 SAH HG1 H N N 322 SAH HG2 H N N 323 SAH HXT H N N 324 SAH "H5'1" H N N 325 SAH "H5'2" H N N 326 SAH "H4'" H N N 327 SAH "H3'" H N N 328 SAH "HO3'" H N N 329 SAH "H2'" H N N 330 SAH "HO2'" H N N 331 SAH "H1'" H N N 332 SAH H8 H N N 333 SAH HN61 H N N 334 SAH HN62 H N N 335 SAH H2 H N N 336 SER N N N N 337 SER CA C N S 338 SER C C N N 339 SER O O N N 340 SER CB C N N 341 SER OG O N N 342 SER OXT O N N 343 SER H H N N 344 SER H2 H N N 345 SER HA H N N 346 SER HB2 H N N 347 SER HB3 H N N 348 SER HG H N N 349 SER HXT H N N 350 THR N N N N 351 THR CA C N S 352 THR C C N N 353 THR O O N N 354 THR CB C N R 355 THR OG1 O N N 356 THR CG2 C N N 357 THR OXT O N N 358 THR H H N N 359 THR H2 H N N 360 THR HA H N N 361 THR HB H N N 362 THR HG1 H N N 363 THR HG21 H N N 364 THR HG22 H N N 365 THR HG23 H N N 366 THR HXT H N N 367 TRP N N N N 368 TRP CA C N S 369 TRP C C N N 370 TRP O O N N 371 TRP CB C N N 372 TRP CG C Y N 373 TRP CD1 C Y N 374 TRP CD2 C Y N 375 TRP NE1 N Y N 376 TRP CE2 C Y N 377 TRP CE3 C Y N 378 TRP CZ2 C Y N 379 TRP CZ3 C Y N 380 TRP CH2 C Y N 381 TRP OXT O N N 382 TRP H H N N 383 TRP H2 H N N 384 TRP HA H N N 385 TRP HB2 H N N 386 TRP HB3 H N N 387 TRP HD1 H N N 388 TRP HE1 H N N 389 TRP HE3 H N N 390 TRP HZ2 H N N 391 TRP HZ3 H N N 392 TRP HH2 H N N 393 TRP HXT H N N 394 TYR N N N N 395 TYR CA C N S 396 TYR C C N N 397 TYR O O N N 398 TYR CB C N N 399 TYR CG C Y N 400 TYR CD1 C Y N 401 TYR CD2 C Y N 402 TYR CE1 C Y N 403 TYR CE2 C Y N 404 TYR CZ C Y N 405 TYR OH O N N 406 TYR OXT O N N 407 TYR H H N N 408 TYR H2 H N N 409 TYR HA H N N 410 TYR HB2 H N N 411 TYR HB3 H N N 412 TYR HD1 H N N 413 TYR HD2 H N N 414 TYR HE1 H N N 415 TYR HE2 H N N 416 TYR HH H N N 417 TYR HXT H N N 418 VAL N N N N 419 VAL CA C N S 420 VAL C C N N 421 VAL O O N N 422 VAL CB C N N 423 VAL CG1 C N N 424 VAL CG2 C N N 425 VAL OXT O N N 426 VAL H H N N 427 VAL H2 H N N 428 VAL HA H N N 429 VAL HB H N N 430 VAL HG11 H N N 431 VAL HG12 H N N 432 VAL HG13 H N N 433 VAL HG21 H N N 434 VAL HG22 H N N 435 VAL HG23 H N N 436 VAL HXT H N N 437 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SAH N CA sing N N 277 SAH N HN1 sing N N 278 SAH N HN2 sing N N 279 SAH CA CB sing N N 280 SAH CA C sing N N 281 SAH CA HA sing N N 282 SAH CB CG sing N N 283 SAH CB HB1 sing N N 284 SAH CB HB2 sing N N 285 SAH CG SD sing N N 286 SAH CG HG1 sing N N 287 SAH CG HG2 sing N N 288 SAH SD "C5'" sing N N 289 SAH C O doub N N 290 SAH C OXT sing N N 291 SAH OXT HXT sing N N 292 SAH "C5'" "C4'" sing N N 293 SAH "C5'" "H5'1" sing N N 294 SAH "C5'" "H5'2" sing N N 295 SAH "C4'" "O4'" sing N N 296 SAH "C4'" "C3'" sing N N 297 SAH "C4'" "H4'" sing N N 298 SAH "O4'" "C1'" sing N N 299 SAH "C3'" "O3'" sing N N 300 SAH "C3'" "C2'" sing N N 301 SAH "C3'" "H3'" sing N N 302 SAH "O3'" "HO3'" sing N N 303 SAH "C2'" "O2'" sing N N 304 SAH "C2'" "C1'" sing N N 305 SAH "C2'" "H2'" sing N N 306 SAH "O2'" "HO2'" sing N N 307 SAH "C1'" N9 sing N N 308 SAH "C1'" "H1'" sing N N 309 SAH N9 C8 sing Y N 310 SAH N9 C4 sing Y N 311 SAH C8 N7 doub Y N 312 SAH C8 H8 sing N N 313 SAH N7 C5 sing Y N 314 SAH C5 C6 sing Y N 315 SAH C5 C4 doub Y N 316 SAH C6 N6 sing N N 317 SAH C6 N1 doub Y N 318 SAH N6 HN61 sing N N 319 SAH N6 HN62 sing N N 320 SAH N1 C2 sing Y N 321 SAH C2 N3 doub Y N 322 SAH C2 H2 sing N N 323 SAH N3 C4 sing Y N 324 SER N CA sing N N 325 SER N H sing N N 326 SER N H2 sing N N 327 SER CA C sing N N 328 SER CA CB sing N N 329 SER CA HA sing N N 330 SER C O doub N N 331 SER C OXT sing N N 332 SER CB OG sing N N 333 SER CB HB2 sing N N 334 SER CB HB3 sing N N 335 SER OG HG sing N N 336 SER OXT HXT sing N N 337 THR N CA sing N N 338 THR N H sing N N 339 THR N H2 sing N N 340 THR CA C sing N N 341 THR CA CB sing N N 342 THR CA HA sing N N 343 THR C O doub N N 344 THR C OXT sing N N 345 THR CB OG1 sing N N 346 THR CB CG2 sing N N 347 THR CB HB sing N N 348 THR OG1 HG1 sing N N 349 THR CG2 HG21 sing N N 350 THR CG2 HG22 sing N N 351 THR CG2 HG23 sing N N 352 THR OXT HXT sing N N 353 TRP N CA sing N N 354 TRP N H sing N N 355 TRP N H2 sing N N 356 TRP CA C sing N N 357 TRP CA CB sing N N 358 TRP CA HA sing N N 359 TRP C O doub N N 360 TRP C OXT sing N N 361 TRP CB CG sing N N 362 TRP CB HB2 sing N N 363 TRP CB HB3 sing N N 364 TRP CG CD1 doub Y N 365 TRP CG CD2 sing Y N 366 TRP CD1 NE1 sing Y N 367 TRP CD1 HD1 sing N N 368 TRP CD2 CE2 doub Y N 369 TRP CD2 CE3 sing Y N 370 TRP NE1 CE2 sing Y N 371 TRP NE1 HE1 sing N N 372 TRP CE2 CZ2 sing Y N 373 TRP CE3 CZ3 doub Y N 374 TRP CE3 HE3 sing N N 375 TRP CZ2 CH2 doub Y N 376 TRP CZ2 HZ2 sing N N 377 TRP CZ3 CH2 sing Y N 378 TRP CZ3 HZ3 sing N N 379 TRP CH2 HH2 sing N N 380 TRP OXT HXT sing N N 381 TYR N CA sing N N 382 TYR N H sing N N 383 TYR N H2 sing N N 384 TYR CA C sing N N 385 TYR CA CB sing N N 386 TYR CA HA sing N N 387 TYR C O doub N N 388 TYR C OXT sing N N 389 TYR CB CG sing N N 390 TYR CB HB2 sing N N 391 TYR CB HB3 sing N N 392 TYR CG CD1 doub Y N 393 TYR CG CD2 sing Y N 394 TYR CD1 CE1 sing Y N 395 TYR CD1 HD1 sing N N 396 TYR CD2 CE2 doub Y N 397 TYR CD2 HD2 sing N N 398 TYR CE1 CZ doub Y N 399 TYR CE1 HE1 sing N N 400 TYR CE2 CZ sing Y N 401 TYR CE2 HE2 sing N N 402 TYR CZ OH sing N N 403 TYR OH HH sing N N 404 TYR OXT HXT sing N N 405 VAL N CA sing N N 406 VAL N H sing N N 407 VAL N H2 sing N N 408 VAL CA C sing N N 409 VAL CA CB sing N N 410 VAL CA HA sing N N 411 VAL C O doub N N 412 VAL C OXT sing N N 413 VAL CB CG1 sing N N 414 VAL CB CG2 sing N N 415 VAL CB HB sing N N 416 VAL CG1 HG11 sing N N 417 VAL CG1 HG12 sing N N 418 VAL CG1 HG13 sing N N 419 VAL CG2 HG21 sing N N 420 VAL CG2 HG22 sing N N 421 VAL CG2 HG23 sing N N 422 VAL OXT HXT sing N N 423 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 S-ADENOSYL-L-HOMOCYSTEINE SAH 3 'CHLORIDE ION' CL 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3KNU _pdbx_initial_refinement_model.details 'PDB ENTRY 3KNU' #