HEADER TRANSCRIPTION 17-DEC-12 4IGK TITLE STRUCTURE OF HUMAN BRCA1 BRCT IN COMPLEX WITH ATRIP PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: BRCT DOMAIN, UNP RESIDUES 1646-1859; COMPND 5 SYNONYM: RING FINGER PROTEIN 53; COMPND 6 EC: 6.3.2.-; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: ATRIP PEPTIDE; COMPND 10 CHAIN: C, D; COMPND 11 FRAGMENT: UNP RESIDUES 237-243; COMPND 12 SYNONYM: ATM AND RAD3-RELATED-INTERACTING PROTEIN; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BRCA1, RNF53; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 OTHER_DETAILS: THIS SEQUENCE OCCURS NATURALLY IN HUMANS. KEYWDS CELL CYCLE, DISEASE MUTATION, DNA DAMAGE, DNA REPAIR, FATTY ACID KEYWDS 2 BIOSYNTHESIS, LIGASE, LIPID SYNTHESIS, METAL-BINDING, NUCLEUS, KEYWDS 3 PHOSPHOPROTEIN, TUMOR SUPPRESSOR, UBL CONJUGATION PATHWAY, ZINC- KEYWDS 4 FINGER, BRCT DOMAIN, DNA DAMAGE RESPONSE, PHOSPHO PEPTIDE KEYWDS 5 INTERACTIONS, DNA-BINDING, PHOSPHO PEPTIDE BINDING, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR X.LIU,J.A.A.LADIAS REVDAT 3 20-SEP-23 4IGK 1 REMARK LINK REVDAT 2 25-DEC-13 4IGK 1 JRNL REVDAT 1 30-OCT-13 4IGK 0 JRNL AUTH X.LIU,J.A.LADIAS JRNL TITL STRUCTURAL BASIS FOR THE BRCA1 BRCT INTERACTION WITH THE JRNL TITL 2 PROTEINS ATRIP AND BAAT1. JRNL REF BIOCHEMISTRY V. 52 7618 2013 JRNL REFN ISSN 0006-2960 JRNL PMID 24073851 JRNL DOI 10.1021/BI400714V REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.500 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 41617 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2204 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3060 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.92 REMARK 3 BIN R VALUE (WORKING SET) : 0.1780 REMARK 3 BIN FREE R VALUE SET COUNT : 159 REMARK 3 BIN FREE R VALUE : 0.2250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3442 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 429 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.87000 REMARK 3 B22 (A**2) : -0.82000 REMARK 3 B33 (A**2) : -0.53000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.49000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.110 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.112 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.070 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.631 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3573 ; 0.020 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3392 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4843 ; 1.982 ; 1.946 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7790 ; 0.974 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 435 ; 6.465 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 158 ;34.408 ;23.481 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 590 ;12.805 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;17.730 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 535 ; 0.127 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3985 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 849 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1649 A 1749 REMARK 3 ORIGIN FOR THE GROUP (A): 19.9218 -1.2906 7.4321 REMARK 3 T TENSOR REMARK 3 T11: 0.0787 T22: 0.0582 REMARK 3 T33: 0.0411 T12: 0.0002 REMARK 3 T13: -0.0049 T23: -0.0086 REMARK 3 L TENSOR REMARK 3 L11: 1.2402 L22: 2.6007 REMARK 3 L33: 0.6988 L12: 0.0285 REMARK 3 L13: -0.2290 L23: 0.2004 REMARK 3 S TENSOR REMARK 3 S11: -0.0551 S12: -0.1496 S13: 0.1649 REMARK 3 S21: 0.1785 S22: 0.0419 S23: 0.1793 REMARK 3 S31: -0.0326 S32: 0.0627 S33: 0.0132 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1750 A 1815 REMARK 3 ORIGIN FOR THE GROUP (A): 13.8314 -20.1968 -7.6079 REMARK 3 T TENSOR REMARK 3 T11: 0.1102 T22: 0.0434 REMARK 3 T33: 0.1453 T12: -0.0057 REMARK 3 T13: -0.0661 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 1.3466 L22: 3.8259 REMARK 3 L33: 0.8796 L12: 0.4129 REMARK 3 L13: 0.1224 L23: -0.3035 REMARK 3 S TENSOR REMARK 3 S11: -0.0877 S12: 0.1240 S13: -0.1582 REMARK 3 S21: -0.4352 S22: 0.1595 S23: 0.6125 REMARK 3 S31: 0.0204 S32: -0.0431 S33: -0.0718 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1819 A 1859 REMARK 3 ORIGIN FOR THE GROUP (A): 16.6091 -29.7327 -3.6346 REMARK 3 T TENSOR REMARK 3 T11: 0.0952 T22: 0.0543 REMARK 3 T33: 0.2118 T12: -0.0054 REMARK 3 T13: -0.0018 T23: 0.0333 REMARK 3 L TENSOR REMARK 3 L11: 0.7611 L22: 6.6831 REMARK 3 L33: 0.7723 L12: 1.3718 REMARK 3 L13: 0.3099 L23: -0.2021 REMARK 3 S TENSOR REMARK 3 S11: -0.0483 S12: 0.0237 S13: -0.1790 REMARK 3 S21: -0.2286 S22: 0.1806 S23: 0.4560 REMARK 3 S31: 0.0602 S32: 0.0027 S33: -0.1323 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4IGK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000076724. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : FAST MONOCHROMATIC ROTARY BEAM REMARK 200 SHUTTERS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43950 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05900 REMARK 200 FOR THE DATA SET : 18.2200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.17800 REMARK 200 FOR SHELL : 7.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1Y98 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350, 0.2 M AMMONIUM ACETATE, REMARK 280 8% GLYCEROL, 0.1 M HEPES PH 7.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2118 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2184 LIES ON A SPECIAL POSITION. REMARK 375 HOH B2194 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 1816 REMARK 465 GLU A 1817 REMARK 465 ASP A 1818 REMARK 465 THR B 1816 REMARK 465 GLU B 1817 REMARK 465 ASP B 1818 REMARK 465 ALA D 4 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A1660 CG CD OE1 OE2 REMARK 470 GLU A1682 CG CD OE1 OE2 REMARK 470 LYS A1793 CG CD CE NZ REMARK 470 GLU A1794 CG CD OE1 OE2 REMARK 470 THR A1799 CB OG1 CG2 REMARK 470 VAL A1804 CB CG1 CG2 REMARK 470 ASN A1819 CB CG OD1 ND2 REMARK 470 ALA A1823 CB REMARK 470 GLN A1826 CG CD OE1 NE2 REMARK 470 GLU B1682 CG CD OE1 OE2 REMARK 470 LYS B1793 CG CD CE NZ REMARK 470 GLU B1794 CG CD OE1 OE2 REMARK 470 VAL B1804 CG1 CG2 REMARK 470 ASN B1819 CB CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 1698 O HOH A 2129 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B1836 CD GLU B1836 OE1 0.095 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A1751 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG A1751 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG A1762 CD - NE - CZ ANGL. DEV. = 10.0 DEGREES REMARK 500 ARG A1762 NE - CZ - NH1 ANGL. DEV. = -9.6 DEGREES REMARK 500 ARG A1762 NE - CZ - NH2 ANGL. DEV. = 8.5 DEGREES REMARK 500 LYS B1750 CD - CE - NZ ANGL. DEV. = 17.0 DEGREES REMARK 500 ARG B1751 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A1745 36.77 -143.78 REMARK 500 MET A1775 97.83 -165.72 REMARK 500 PHE A1798 -103.73 -63.47 REMARK 500 THR A1799 143.58 83.06 REMARK 500 LEU A1800 -94.49 -151.09 REMARK 500 THR A1802 -102.28 14.95 REMARK 500 VAL A1804 -95.01 -102.34 REMARK 500 ASN B1745 42.68 -142.28 REMARK 500 ARG B1758 64.87 -156.83 REMARK 500 MET B1775 99.95 -165.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1902 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IFI RELATED DB: PDB REMARK 900 SAME PROTEIN IN COMPLEX WITH BAAT PEPTIDE DBREF 4IGK A 1646 1859 UNP P38398 BRCA1_HUMAN 1646 1859 DBREF 4IGK B 1646 1859 UNP P38398 BRCA1_HUMAN 1646 1859 DBREF 4IGK C 4 10 UNP Q8WXE1 ATRIP_HUMAN 237 243 DBREF 4IGK D 4 10 UNP Q8WXE1 ATRIP_HUMAN 237 243 SEQRES 1 A 214 VAL ASN LYS ARG MET SER MET VAL VAL SER GLY LEU THR SEQRES 2 A 214 PRO GLU GLU PHE MET LEU VAL TYR LYS PHE ALA ARG LYS SEQRES 3 A 214 HIS HIS ILE THR LEU THR ASN LEU ILE THR GLU GLU THR SEQRES 4 A 214 THR HIS VAL VAL MET LYS THR ASP ALA GLU PHE VAL CYS SEQRES 5 A 214 GLU ARG THR LEU LYS TYR PHE LEU GLY ILE ALA GLY GLY SEQRES 6 A 214 LYS TRP VAL VAL SER TYR PHE TRP VAL THR GLN SER ILE SEQRES 7 A 214 LYS GLU ARG LYS MET LEU ASN GLU HIS ASP PHE GLU VAL SEQRES 8 A 214 ARG GLY ASP VAL VAL ASN GLY ARG ASN HIS GLN GLY PRO SEQRES 9 A 214 LYS ARG ALA ARG GLU SER GLN ASP ARG LYS ILE PHE ARG SEQRES 10 A 214 GLY LEU GLU ILE CYS CYS TYR GLY PRO PHE THR ASN MET SEQRES 11 A 214 PRO THR ASP GLN LEU GLU TRP MET VAL GLN LEU CYS GLY SEQRES 12 A 214 ALA SER VAL VAL LYS GLU LEU SER SER PHE THR LEU GLY SEQRES 13 A 214 THR GLY VAL HIS PRO ILE VAL VAL VAL GLN PRO ASP ALA SEQRES 14 A 214 TRP THR GLU ASP ASN GLY PHE HIS ALA ILE GLY GLN MET SEQRES 15 A 214 CYS GLU ALA PRO VAL VAL THR ARG GLU TRP VAL LEU ASP SEQRES 16 A 214 SER VAL ALA LEU TYR GLN CYS GLN GLU LEU ASP THR TYR SEQRES 17 A 214 LEU ILE PRO GLN ILE PRO SEQRES 1 B 214 VAL ASN LYS ARG MET SER MET VAL VAL SER GLY LEU THR SEQRES 2 B 214 PRO GLU GLU PHE MET LEU VAL TYR LYS PHE ALA ARG LYS SEQRES 3 B 214 HIS HIS ILE THR LEU THR ASN LEU ILE THR GLU GLU THR SEQRES 4 B 214 THR HIS VAL VAL MET LYS THR ASP ALA GLU PHE VAL CYS SEQRES 5 B 214 GLU ARG THR LEU LYS TYR PHE LEU GLY ILE ALA GLY GLY SEQRES 6 B 214 LYS TRP VAL VAL SER TYR PHE TRP VAL THR GLN SER ILE SEQRES 7 B 214 LYS GLU ARG LYS MET LEU ASN GLU HIS ASP PHE GLU VAL SEQRES 8 B 214 ARG GLY ASP VAL VAL ASN GLY ARG ASN HIS GLN GLY PRO SEQRES 9 B 214 LYS ARG ALA ARG GLU SER GLN ASP ARG LYS ILE PHE ARG SEQRES 10 B 214 GLY LEU GLU ILE CYS CYS TYR GLY PRO PHE THR ASN MET SEQRES 11 B 214 PRO THR ASP GLN LEU GLU TRP MET VAL GLN LEU CYS GLY SEQRES 12 B 214 ALA SER VAL VAL LYS GLU LEU SER SER PHE THR LEU GLY SEQRES 13 B 214 THR GLY VAL HIS PRO ILE VAL VAL VAL GLN PRO ASP ALA SEQRES 14 B 214 TRP THR GLU ASP ASN GLY PHE HIS ALA ILE GLY GLN MET SEQRES 15 B 214 CYS GLU ALA PRO VAL VAL THR ARG GLU TRP VAL LEU ASP SEQRES 16 B 214 SER VAL ALA LEU TYR GLN CYS GLN GLU LEU ASP THR TYR SEQRES 17 B 214 LEU ILE PRO GLN ILE PRO SEQRES 1 C 7 ALA CYS SEP PRO GLN PHE GLY SEQRES 1 D 7 ALA CYS SEP PRO GLN PHE GLY MODRES 4IGK SEP C 6 SER PHOSPHOSERINE MODRES 4IGK SEP D 6 SER PHOSPHOSERINE HET SEP C 6 10 HET SEP D 6 10 HET GOL A1901 6 HET GOL A1902 6 HET GOL B1901 6 HET GOL B1902 6 HETNAM SEP PHOSPHOSERINE HETNAM GOL GLYCEROL HETSYN SEP PHOSPHONOSERINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 SEP 2(C3 H8 N O6 P) FORMUL 5 GOL 4(C3 H8 O3) FORMUL 9 HOH *429(H2 O) HELIX 1 1 THR A 1658 HIS A 1672 1 15 HELIX 2 2 THR A 1700 GLY A 1709 1 10 HELIX 3 3 TYR A 1716 ARG A 1726 1 11 HELIX 4 4 ASN A 1730 GLU A 1735 5 6 HELIX 5 5 GLN A 1747 SER A 1755 1 9 HELIX 6 6 PRO A 1776 CYS A 1787 1 12 HELIX 7 7 GLU A 1794 PHE A 1798 5 5 HELIX 8 8 GLN A 1811 TRP A 1815 5 5 HELIX 9 9 ASN A 1819 HIS A 1822 5 4 HELIX 10 10 ALA A 1823 CYS A 1828 1 6 HELIX 11 11 ARG A 1835 TYR A 1845 1 11 HELIX 12 12 LEU A 1850 LEU A 1854 5 5 HELIX 13 13 THR B 1658 HIS B 1673 1 16 HELIX 14 14 THR B 1700 GLY B 1709 1 10 HELIX 15 15 TYR B 1716 GLU B 1725 1 10 HELIX 16 16 ASN B 1730 GLU B 1735 5 6 HELIX 17 17 GLN B 1747 GLU B 1754 1 8 HELIX 18 18 PRO B 1776 CYS B 1787 1 12 HELIX 19 19 GLU B 1794 PHE B 1798 5 5 HELIX 20 20 GLN B 1811 TRP B 1815 5 5 HELIX 21 21 ASN B 1819 MET B 1827 5 9 HELIX 22 22 ARG B 1835 TYR B 1845 1 11 HELIX 23 23 LEU B 1850 LEU B 1854 5 5 SHEET 1 A 4 THR A1675 LEU A1676 0 SHEET 2 A 4 SER A1651 SER A1655 1 N MET A1652 O THR A1675 SHEET 3 A 4 HIS A1686 MET A1689 1 O VAL A1688 N VAL A1653 SHEET 4 A 4 TRP A1712 SER A1715 1 O TRP A1712 N VAL A1687 SHEET 1 B 2 VAL A1696 CYS A1697 0 SHEET 2 B 2 GLY A1738 ASP A1739 1 O GLY A1738 N CYS A1697 SHEET 1 C 4 SER A1790 VAL A1792 0 SHEET 2 C 4 GLU A1765 CYS A1768 1 N ILE A1766 O SER A1790 SHEET 3 C 4 PRO A1806 VAL A1810 1 O VAL A1809 N CYS A1767 SHEET 4 C 4 VAL A1832 THR A1834 1 O VAL A1833 N VAL A1808 SHEET 1 D 4 THR B1675 LEU B1676 0 SHEET 2 D 4 SER B1651 SER B1655 1 N MET B1652 O THR B1675 SHEET 3 D 4 HIS B1686 MET B1689 1 O VAL B1688 N VAL B1653 SHEET 4 D 4 TRP B1712 SER B1715 1 O TRP B1712 N VAL B1687 SHEET 1 E 2 VAL B1696 CYS B1697 0 SHEET 2 E 2 GLY B1738 ASP B1739 1 O GLY B1738 N CYS B1697 SHEET 1 F 4 SER B1790 VAL B1791 0 SHEET 2 F 4 LEU B1764 CYS B1768 1 N LEU B1764 O SER B1790 SHEET 3 F 4 HIS B1805 VAL B1810 1 O VAL B1809 N CYS B1767 SHEET 4 F 4 VAL B1832 THR B1834 1 O VAL B1833 N VAL B1808 SSBOND 1 CYS C 5 CYS D 5 1555 1556 2.88 LINK C CYS C 5 N SEP C 6 1555 1555 1.32 LINK C SEP C 6 N PRO C 7 1555 1555 1.30 LINK C CYS D 5 N SEP D 6 1555 1555 1.34 LINK C SEP D 6 N PRO D 7 1555 1555 1.34 CISPEP 1 THR A 1799 LEU A 1800 0 14.00 CISPEP 2 VAL A 1804 HIS A 1805 0 -6.26 SITE 1 AC1 8 VAL A1654 SER A1655 GLY A1656 LEU A1657 SITE 2 AC1 8 ASN A1678 HOH A2009 GLU B1660 SEP C 6 SITE 1 AC2 6 GLY A1710 LYS A1711 TRP A1712 ARG A1753 SITE 2 AC2 6 HOH A2052 HOH A2053 SITE 1 AC3 9 VAL B1654 SER B1655 GLY B1656 LEU B1657 SITE 2 AC3 9 ASN B1678 HOH B2048 HOH B2050 HOH B2139 SITE 3 AC3 9 SEP D 6 SITE 1 AC4 6 GLY B1710 LYS B1711 TRP B1712 ARG B1753 SITE 2 AC4 6 HOH B2054 HOH B2178 CRYST1 65.666 50.309 73.977 90.00 116.03 90.00 P 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015229 0.000000 0.007437 0.00000 SCALE2 0.000000 0.019877 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015044 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 -0.998429 -0.002344 -0.055991 47.18395 1 MTRIX2 2 -0.002478 0.999994 0.002324 0.33283 1 MTRIX3 2 0.055986 0.002459 -0.998429 -34.21409 1