HEADER OXIDOREDUCTASE 19-DEC-12 4II4 TITLE THE PHENYLACETYL-COA MONOOXYGENASE - MUTANT PAAA E49Q K68Q - PAAC WILD TITLE 2 TYPE SUBCOMPLEX WITH BENZOYL-COA COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1,2-PHENYLACETYL-COA EPOXIDASE, SUBUNIT A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 1,2-PHENYLACETYL-COA EPOXIDASE, CATALYTIC SUBUNIT ALPHA, 1, COMPND 5 2-PHENYLACETYL-COA MONOOXYGENASE, SUBUNIT A; COMPND 6 EC: 1.14.13.149; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: 1,2-PHENYLACETYL-COA EPOXIDASE, SUBUNIT C; COMPND 11 CHAIN: B, C; COMPND 12 SYNONYM: 1,2-PHENYLACETYL-COA EPOXIDASE, STRUCTURAL SUBUNIT BETA, 1, COMPND 13 2-PHENYLACETYL-COA MONOOXYGENASE, SUBUNIT C; COMPND 14 EC: 1.14.13.-; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 511145; SOURCE 4 STRAIN: K-12 SUBSTR. MG1655; SOURCE 5 GENE: B1388, JW1383, PAAA, YDBO; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PRSFDUET-1; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 13 ORGANISM_TAXID: 511145; SOURCE 14 STRAIN: K-12 SUBSTR. MG1655; SOURCE 15 GENE: B1390, JW1385, PAAC, YDBP; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS PROTEIN-PROTEIN COMPLEX, STRUCTURAL GENOMICS, MONTREAL-KINGSTON KEYWDS 2 BACTERIAL STRUCTURAL GENOMICS INITIATIVE, BSGI, FERRITIN-LIKE FOLD, KEYWDS 3 BACTERIAL MULTICOMPONENT MONOOXYGENASE PAAABCE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.CYGLER,A.M.GRISHIN,MONTREAL-KINGSTON BACTERIAL STRUCTURAL GENOMICS AUTHOR 2 INITIATIVE (BSGI) REVDAT 3 20-SEP-23 4II4 1 REMARK SEQADV REVDAT 2 15-NOV-17 4II4 1 REMARK REVDAT 1 20-AUG-14 4II4 0 JRNL AUTH A.M.GRISHIN,E.AJAMIAN,L.TAO,M.BOSTINA,L.ZHANG,J.TREMPE, JRNL AUTH 2 R.MENARD,I.ROUILLER,M.CYGLER JRNL TITL SPATIAL ORGANIZATION OF SUBUNITS WITHIN THE PHENYLACETYL-COA JRNL TITL 2 MONOOXYGENASE COMPLEX JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8_1069 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 23832 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 1218 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.480 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 119.1 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID -1:302 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.3046 45.3068 -29.8526 REMARK 3 T TENSOR REMARK 3 T11: 0.9380 T22: 1.0206 REMARK 3 T33: 0.6922 T12: -0.2051 REMARK 3 T13: -0.0417 T23: 0.2336 REMARK 3 L TENSOR REMARK 3 L11: 2.5348 L22: 2.9138 REMARK 3 L33: 4.6259 L12: 0.7715 REMARK 3 L13: -0.7340 L23: -0.8296 REMARK 3 S TENSOR REMARK 3 S11: -0.2591 S12: 0.9182 S13: 0.4844 REMARK 3 S21: -0.5992 S22: -0.1043 S23: -0.3993 REMARK 3 S31: -1.1378 S32: 0.5014 S33: 0.2964 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN B AND RESID 1:239 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.1650 13.2703 -41.4499 REMARK 3 T TENSOR REMARK 3 T11: 0.6569 T22: 1.4833 REMARK 3 T33: 1.1164 T12: -0.0974 REMARK 3 T13: 0.1964 T23: -0.1669 REMARK 3 L TENSOR REMARK 3 L11: 3.3460 L22: 7.0434 REMARK 3 L33: 2.8807 L12: -2.4294 REMARK 3 L13: -0.7051 L23: 1.7706 REMARK 3 S TENSOR REMARK 3 S11: -0.1823 S12: 0.4505 S13: -0.9216 REMARK 3 S21: 0.3673 S22: -0.3861 S23: 1.7269 REMARK 3 S31: 0.3953 S32: -0.7749 S33: 0.5699 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN C AND RESID 1:248 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.6563 28.5541 -1.4769 REMARK 3 T TENSOR REMARK 3 T11: 0.5953 T22: 1.1504 REMARK 3 T33: 0.7571 T12: 0.0299 REMARK 3 T13: -0.0508 T23: 0.2415 REMARK 3 L TENSOR REMARK 3 L11: 4.4471 L22: 2.3216 REMARK 3 L33: 4.7938 L12: -0.2566 REMARK 3 L13: 0.0048 L23: 0.1335 REMARK 3 S TENSOR REMARK 3 S11: -0.1640 S12: -0.1084 S13: -0.1072 REMARK 3 S21: 0.2503 S22: -0.1819 S23: -0.8816 REMARK 3 S31: 0.2840 S32: 1.8276 S33: 0.3456 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 401:401 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.9457 53.2719 -34.2332 REMARK 3 T TENSOR REMARK 3 T11: 1.3531 T22: 2.0107 REMARK 3 T33: 1.2736 T12: -0.3027 REMARK 3 T13: 0.3507 T23: 0.5597 REMARK 3 L TENSOR REMARK 3 L11: 0.2409 L22: 0.8576 REMARK 3 L33: 0.5128 L12: 0.2973 REMARK 3 L13: 0.1533 L23: 0.6404 REMARK 3 S TENSOR REMARK 3 S11: -0.2256 S12: 0.7876 S13: 0.1762 REMARK 3 S21: -1.1730 S22: 0.0939 S23: -0.2579 REMARK 3 S31: -0.4779 S32: 0.1758 S33: 0.1314 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4II4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000076780. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-10 REMARK 200 TEMPERATURE (KELVIN) : 77.2 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : DCM WITH CRYO-COOLED 1ST CRYSTAL REMARK 200 SAGITALLY BENT 2ND CRYSTAL REMARK 200 FOLLOWED BY VERTICALLY FOCUSING REMARK 200 MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24054 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 14.00 REMARK 200 R MERGE (I) : 0.12700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.10 REMARK 200 R MERGE FOR SHELL (I) : 0.83300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: ISOMORPHOUS REPLACEMENT REMARK 200 WITH 3PW1 REMARK 200 SOFTWARE USED: 3PW1 SUBMITTED DIRECTLY TO PHENIX_REFINE REMARK 200 STARTING MODEL: 3PW1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% ETHYLENE GLYCOL, PH 8.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 152.34600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 38.79750 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 38.79750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 76.17300 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 38.79750 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 38.79750 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 228.51900 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 38.79750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 38.79750 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 76.17300 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 38.79750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 38.79750 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 228.51900 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 152.34600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -76.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 -77.59500 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 77.59500 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 303 REMARK 465 HIS A 304 REMARK 465 ALA A 305 REMARK 465 ARG A 306 REMARK 465 LYS A 307 REMARK 465 VAL A 308 REMARK 465 ALA A 309 REMARK 465 MET B -10 REMARK 465 GLY B -9 REMARK 465 SER B -8 REMARK 465 SER B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 GLY B 0 REMARK 465 GLN B 240 REMARK 465 ARG B 241 REMARK 465 VAL B 242 REMARK 465 LEU B 243 REMARK 465 PRO B 244 REMARK 465 GLY B 245 REMARK 465 GLN B 246 REMARK 465 GLN B 247 REMARK 465 TRP B 248 REMARK 465 MET C -10 REMARK 465 GLY C -9 REMARK 465 SER C -8 REMARK 465 SER C -7 REMARK 465 HIS C -6 REMARK 465 HIS C -5 REMARK 465 HIS C -4 REMARK 465 HIS C -3 REMARK 465 HIS C -2 REMARK 465 HIS C -1 REMARK 465 GLY C 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A -1 CG SD CE REMARK 470 PHE A 7 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A 13 CG CD OE1 NE2 REMARK 470 GLU A 14 CG CD OE1 OE2 REMARK 470 GLN A 49 CD OE1 NE2 REMARK 470 GLN A 68 CD OE1 NE2 REMARK 470 LYS A 96 CG CD CE NZ REMARK 470 GLU A 155 CG CD OE1 OE2 REMARK 470 ARG A 207 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 224 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 255 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 302 CG CD CE NZ REMARK 470 GLN B 3 CG CD OE1 NE2 REMARK 470 GLU B 33 CG CD OE1 OE2 REMARK 470 GLU B 65 CG CD OE1 OE2 REMARK 470 GLU B 74 CG CD OE1 OE2 REMARK 470 GLU B 113 CG CD OE1 OE2 REMARK 470 LYS B 125 CE NZ REMARK 470 LEU B 144 CG CD1 CD2 REMARK 470 ILE B 177 CG1 CG2 CD1 REMARK 470 ILE B 203 CD1 REMARK 470 LEU B 208 CG CD1 CD2 REMARK 470 GLN B 212 CG CD OE1 NE2 REMARK 470 GLU B 213 CG CD OE1 OE2 REMARK 470 GLN B 214 CG CD OE1 NE2 REMARK 470 ARG C 115 CG CD NE CZ NH1 NH2 REMARK 470 LEU C 208 CG CD1 CD2 REMARK 470 GLU C 213 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR B 67 OG1 THR B 71 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 198 160.28 -49.14 REMARK 500 MET B 112 21.62 -74.15 REMARK 500 ASP B 149 -56.15 100.85 REMARK 500 GLU B 213 137.89 -173.27 REMARK 500 MET B 236 -83.08 -65.03 REMARK 500 GLN B 237 -62.80 -3.50 REMARK 500 TYR C 216 -0.20 -142.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 BYC A 401 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BYC A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3PVR RELATED DB: PDB REMARK 900 THE WILD-TYPE (NON-MUTATED) PAAAC COMPLEX REMARK 900 RELATED ID: BSGI-PAAA_ECOLI RELATED DB: TARGETTRACK REMARK 900 RELATED ID: BSGI-PAAC_ECOLI RELATED DB: TARGETTRACK DBREF 4II4 A 2 309 UNP P76077 PAAA_ECOLI 2 309 DBREF 4II4 B 2 248 UNP P76079 PAAC_ECOLI 2 248 DBREF 4II4 C 2 248 UNP P76079 PAAC_ECOLI 2 248 SEQADV 4II4 MET A -1 UNP P76077 EXPRESSION TAG SEQADV 4II4 ARG A 0 UNP P76077 EXPRESSION TAG SEQADV 4II4 SER A 1 UNP P76077 EXPRESSION TAG SEQADV 4II4 GLN A 49 UNP P76077 GLU 49 ENGINEERED MUTATION SEQADV 4II4 GLN A 68 UNP P76077 LYS 68 ENGINEERED MUTATION SEQADV 4II4 MET B -10 UNP P76079 EXPRESSION TAG SEQADV 4II4 GLY B -9 UNP P76079 EXPRESSION TAG SEQADV 4II4 SER B -8 UNP P76079 EXPRESSION TAG SEQADV 4II4 SER B -7 UNP P76079 EXPRESSION TAG SEQADV 4II4 HIS B -6 UNP P76079 EXPRESSION TAG SEQADV 4II4 HIS B -5 UNP P76079 EXPRESSION TAG SEQADV 4II4 HIS B -4 UNP P76079 EXPRESSION TAG SEQADV 4II4 HIS B -3 UNP P76079 EXPRESSION TAG SEQADV 4II4 HIS B -2 UNP P76079 EXPRESSION TAG SEQADV 4II4 HIS B -1 UNP P76079 EXPRESSION TAG SEQADV 4II4 GLY B 0 UNP P76079 EXPRESSION TAG SEQADV 4II4 SER B 1 UNP P76079 EXPRESSION TAG SEQADV 4II4 MET C -10 UNP P76079 EXPRESSION TAG SEQADV 4II4 GLY C -9 UNP P76079 EXPRESSION TAG SEQADV 4II4 SER C -8 UNP P76079 EXPRESSION TAG SEQADV 4II4 SER C -7 UNP P76079 EXPRESSION TAG SEQADV 4II4 HIS C -6 UNP P76079 EXPRESSION TAG SEQADV 4II4 HIS C -5 UNP P76079 EXPRESSION TAG SEQADV 4II4 HIS C -4 UNP P76079 EXPRESSION TAG SEQADV 4II4 HIS C -3 UNP P76079 EXPRESSION TAG SEQADV 4II4 HIS C -2 UNP P76079 EXPRESSION TAG SEQADV 4II4 HIS C -1 UNP P76079 EXPRESSION TAG SEQADV 4II4 GLY C 0 UNP P76079 EXPRESSION TAG SEQADV 4II4 SER C 1 UNP P76079 EXPRESSION TAG SEQRES 1 A 311 MET ARG SER THR GLN GLU GLU ARG PHE GLU GLN ARG ILE SEQRES 2 A 311 ALA GLN GLU THR ALA ILE GLU PRO GLN ASP TRP MET PRO SEQRES 3 A 311 ASP ALA TYR ARG LYS THR LEU ILE ARG GLN ILE GLY GLN SEQRES 4 A 311 HIS ALA HIS SER GLU ILE VAL GLY MET LEU PRO GLN GLY SEQRES 5 A 311 ASN TRP ILE THR ARG ALA PRO THR LEU ARG ARG LYS ALA SEQRES 6 A 311 ILE LEU LEU ALA GLN VAL GLN ASP GLU ALA GLY HIS GLY SEQRES 7 A 311 LEU TYR LEU TYR SER ALA ALA GLU THR LEU GLY CYS ALA SEQRES 8 A 311 ARG GLU ASP ILE TYR GLN LYS MET LEU ASP GLY ARG MET SEQRES 9 A 311 LYS TYR SER SER ILE PHE ASN TYR PRO THR LEU SER TRP SEQRES 10 A 311 ALA ASP ILE GLY VAL ILE GLY TRP LEU VAL ASP GLY ALA SEQRES 11 A 311 ALA ILE VAL ASN GLN VAL ALA LEU CYS ARG THR SER TYR SEQRES 12 A 311 GLY PRO TYR ALA ARG ALA MET VAL LYS ILE CYS LYS GLU SEQRES 13 A 311 GLU SER PHE HIS GLN ARG GLN GLY PHE GLU ALA CYS MET SEQRES 14 A 311 ALA LEU ALA GLN GLY SER GLU ALA GLN LYS GLN MET LEU SEQRES 15 A 311 GLN ASP ALA ILE ASN ARG PHE TRP TRP PRO ALA LEU MET SEQRES 16 A 311 MET PHE GLY PRO ASN ASP ASP ASN SER PRO ASN SER ALA SEQRES 17 A 311 ARG SER LEU THR TRP LYS ILE LYS ARG PHE THR ASN ASP SEQRES 18 A 311 GLU LEU ARG GLN ARG PHE VAL ASP ASN THR VAL PRO GLN SEQRES 19 A 311 VAL GLU MET LEU GLY MET THR VAL PRO ASP PRO ASP LEU SEQRES 20 A 311 HIS PHE ASP THR GLU SER GLY HIS TYR ARG PHE GLY GLU SEQRES 21 A 311 ILE ASP TRP GLN GLU PHE ASN GLU VAL ILE ASN GLY ARG SEQRES 22 A 311 GLY ILE CYS ASN GLN GLU ARG LEU ASP ALA LYS ARG LYS SEQRES 23 A 311 ALA TRP GLU GLU GLY THR TRP VAL ARG GLU ALA ALA LEU SEQRES 24 A 311 ALA HIS ALA GLN LYS GLN HIS ALA ARG LYS VAL ALA SEQRES 1 B 259 MET GLY SER SER HIS HIS HIS HIS HIS HIS GLY SER ASN SEQRES 2 B 259 GLN LEU THR ALA TYR THR LEU ARG LEU GLY ASP ASN CYS SEQRES 3 B 259 LEU VAL LEU SER GLN ARG LEU GLY GLU TRP CYS GLY HIS SEQRES 4 B 259 ALA PRO GLU LEU GLU ILE ASP LEU ALA LEU ALA ASN ILE SEQRES 5 B 259 GLY LEU ASP LEU LEU GLY GLN ALA ARG ASN PHE LEU SER SEQRES 6 B 259 TYR ALA ALA GLU LEU ALA GLY GLU GLY ASP GLU ASP THR SEQRES 7 B 259 LEU ALA PHE THR ARG ASP GLU ARG GLN PHE SER ASN LEU SEQRES 8 B 259 LEU LEU VAL GLU GLN PRO ASN GLY ASN PHE ALA ASP THR SEQRES 9 B 259 ILE ALA ARG GLN TYR PHE ILE ASP ALA TRP HIS VAL ALA SEQRES 10 B 259 LEU PHE THR ARG LEU MET GLU SER ARG ASP PRO GLN LEU SEQRES 11 B 259 ALA ALA ILE SER ALA LYS ALA ILE LYS GLU ALA ARG TYR SEQRES 12 B 259 HIS LEU ARG PHE SER ARG GLY TRP LEU GLU ARG LEU GLY SEQRES 13 B 259 ASN GLY THR ASP VAL SER GLY GLN LYS MET GLN GLN ALA SEQRES 14 B 259 ILE ASN LYS LEU TRP ARG PHE THR ALA GLU LEU PHE ASP SEQRES 15 B 259 ALA ASP GLU ILE ASP ILE ALA LEU SER GLU GLU GLY ILE SEQRES 16 B 259 ALA VAL ASP PRO ARG THR LEU ARG ALA ALA TRP GLU ALA SEQRES 17 B 259 GLU VAL PHE ALA GLY ILE ASN GLU ALA THR LEU ASN VAL SEQRES 18 B 259 PRO GLN GLU GLN ALA TYR ARG THR GLY GLY LYS LYS GLY SEQRES 19 B 259 LEU HIS THR GLU HIS LEU GLY PRO MET LEU ALA GLU MET SEQRES 20 B 259 GLN TYR LEU GLN ARG VAL LEU PRO GLY GLN GLN TRP SEQRES 1 C 259 MET GLY SER SER HIS HIS HIS HIS HIS HIS GLY SER ASN SEQRES 2 C 259 GLN LEU THR ALA TYR THR LEU ARG LEU GLY ASP ASN CYS SEQRES 3 C 259 LEU VAL LEU SER GLN ARG LEU GLY GLU TRP CYS GLY HIS SEQRES 4 C 259 ALA PRO GLU LEU GLU ILE ASP LEU ALA LEU ALA ASN ILE SEQRES 5 C 259 GLY LEU ASP LEU LEU GLY GLN ALA ARG ASN PHE LEU SER SEQRES 6 C 259 TYR ALA ALA GLU LEU ALA GLY GLU GLY ASP GLU ASP THR SEQRES 7 C 259 LEU ALA PHE THR ARG ASP GLU ARG GLN PHE SER ASN LEU SEQRES 8 C 259 LEU LEU VAL GLU GLN PRO ASN GLY ASN PHE ALA ASP THR SEQRES 9 C 259 ILE ALA ARG GLN TYR PHE ILE ASP ALA TRP HIS VAL ALA SEQRES 10 C 259 LEU PHE THR ARG LEU MET GLU SER ARG ASP PRO GLN LEU SEQRES 11 C 259 ALA ALA ILE SER ALA LYS ALA ILE LYS GLU ALA ARG TYR SEQRES 12 C 259 HIS LEU ARG PHE SER ARG GLY TRP LEU GLU ARG LEU GLY SEQRES 13 C 259 ASN GLY THR ASP VAL SER GLY GLN LYS MET GLN GLN ALA SEQRES 14 C 259 ILE ASN LYS LEU TRP ARG PHE THR ALA GLU LEU PHE ASP SEQRES 15 C 259 ALA ASP GLU ILE ASP ILE ALA LEU SER GLU GLU GLY ILE SEQRES 16 C 259 ALA VAL ASP PRO ARG THR LEU ARG ALA ALA TRP GLU ALA SEQRES 17 C 259 GLU VAL PHE ALA GLY ILE ASN GLU ALA THR LEU ASN VAL SEQRES 18 C 259 PRO GLN GLU GLN ALA TYR ARG THR GLY GLY LYS LYS GLY SEQRES 19 C 259 LEU HIS THR GLU HIS LEU GLY PRO MET LEU ALA GLU MET SEQRES 20 C 259 GLN TYR LEU GLN ARG VAL LEU PRO GLY GLN GLN TRP HET BYC A 401 46 HETNAM BYC BENZOYL COENZYME A FORMUL 4 BYC C28 H40 N7 O17 P3 S FORMUL 5 HOH *25(H2 O) HELIX 1 1 SER A 1 GLN A 13 1 13 HELIX 2 2 PRO A 24 GLY A 45 1 22 HELIX 3 3 GLY A 45 ASN A 51 1 7 HELIX 4 4 THR A 58 THR A 85 1 28 HELIX 5 5 ALA A 89 ASP A 99 1 11 HELIX 6 6 SER A 105 TYR A 110 5 6 HELIX 7 7 SER A 114 LEU A 136 1 23 HELIX 8 8 TYR A 141 GLN A 171 1 31 HELIX 9 9 SER A 173 MET A 194 1 22 HELIX 10 10 ASN A 204 TRP A 211 1 8 HELIX 11 11 THR A 217 LEU A 236 1 20 HELIX 12 12 ASP A 260 ASN A 269 1 10 HELIX 13 13 CYS A 274 GLY A 289 1 16 HELIX 14 14 GLY A 289 LYS A 302 1 14 HELIX 15 15 ASN B 2 GLU B 24 1 23 HELIX 16 16 GLU B 31 GLY B 61 1 31 HELIX 17 17 ASP B 64 THR B 71 1 8 HELIX 18 18 ASP B 73 PHE B 77 5 5 HELIX 19 19 LEU B 80 GLN B 85 5 6 HELIX 20 20 ASN B 89 MET B 112 1 24 HELIX 21 21 ASP B 116 ASN B 146 1 31 HELIX 22 22 ASP B 149 TRP B 163 1 15 HELIX 23 23 ARG B 164 ASP B 171 5 8 HELIX 24 24 ASP B 173 GLU B 181 1 9 HELIX 25 25 ASP B 187 THR B 190 5 4 HELIX 26 26 LEU B 191 ALA B 206 1 16 HELIX 27 27 GLY B 219 GLY B 223 5 5 HELIX 28 28 HIS B 228 TYR B 238 1 11 HELIX 29 29 ASN C 2 GLU C 24 1 23 HELIX 30 30 GLU C 31 GLY C 61 1 31 HELIX 31 31 ASP C 64 THR C 71 1 8 HELIX 32 32 LEU C 81 GLN C 85 5 5 HELIX 33 33 ASN C 89 MET C 112 1 24 HELIX 34 34 ASP C 116 ASN C 146 1 31 HELIX 35 35 THR C 148 TRP C 163 1 16 HELIX 36 36 ARG C 164 ASP C 171 5 8 HELIX 37 37 ASP C 173 GLU C 182 1 10 HELIX 38 38 ASP C 187 THR C 190 5 4 HELIX 39 39 LEU C 191 ALA C 206 1 16 HELIX 40 40 GLY C 219 GLY C 223 5 5 HELIX 41 41 HIS C 228 LEU C 243 1 16 SHEET 1 A 2 HIS A 246 ASP A 248 0 SHEET 2 A 2 HIS A 253 ARG A 255 -1 O ARG A 255 N HIS A 246 CISPEP 1 GLN B 212 GLU B 213 0 0.36 SITE 1 AC1 20 ARG A 33 GLN A 34 GLN A 37 HIS A 38 SITE 2 AC1 20 SER A 41 GLU A 42 LYS A 103 TYR A 104 SITE 3 AC1 20 SER A 106 ASN A 132 GLN A 133 MET A 193 SITE 4 AC1 20 MET A 194 GLY A 196 PRO A 197 SER A 202 SITE 5 AC1 20 PRO A 203 ASN A 204 LYS A 214 ASN A 218 CRYST1 77.595 77.595 304.692 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012887 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012887 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003282 0.00000