data_4III
# 
_entry.id   4III 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.381 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   4III         pdb_00004iii 10.2210/pdb4iii/pdb 
NDB   NA2179       ?            ?                   
RCSB  RCSB076794   ?            ?                   
WWPDB D_1000076794 ?            ?                   
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        4III 
_pdbx_database_status.recvd_initial_deposition_date   2012-12-20 
_pdbx_database_status.deposit_site                    RCSB 
_pdbx_database_status.process_site                    PDBJ 
_pdbx_database_status.methods_development_category    ? 
_pdbx_database_status.status_code_sf                  REL 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.SG_entry                        ? 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_nmr_data            ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Hall, J.P.'   1 
'Cardin, C.J.' 2 
# 
_citation.id                        primary 
_citation.title                     
;Preferred orientation in an angled intercalation site of a chloro-substituted Lambda-[Ru(TAP)2(dppz)]2+ complex bound to d(TCGGCGCCGA)2.
;
_citation.journal_abbrev            'Philos Trans A Math Phys Eng Sci' 
_citation.journal_volume            371 
_citation.page_first                20120525 
_citation.page_last                 20120525 
_citation.year                      2013 
_citation.journal_id_ASTM           ? 
_citation.country                   UK 
_citation.journal_id_ISSN           1364-503X 
_citation.journal_id_CSD            ? 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   23776304 
_citation.pdbx_database_id_DOI      10.1098/rsta.2012.0525 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Hall, J.P.'   1 ? 
primary 'Beer, H.'     2 ? 
primary 'Buchner, K.'  3 ? 
primary 'Cardin, D.J.' 4 ? 
primary 'Cardin, C.J.' 5 ? 
# 
_cell.entry_id           4III 
_cell.length_a           42.340 
_cell.length_b           42.340 
_cell.length_c           39.630 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        90.00 
_cell.Z_PDB              8 
_cell.pdbx_unique_axis   ? 
_cell.length_a_esd       ? 
_cell.length_b_esd       ? 
_cell.length_c_esd       ? 
_cell.angle_alpha_esd    ? 
_cell.angle_beta_esd     ? 
_cell.angle_gamma_esd    ? 
# 
_symmetry.entry_id                         4III 
_symmetry.space_group_name_H-M             'P 43 21 2' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                96 
_symmetry.space_group_name_Hall            ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer     syn "5'-D(*TP*CP*GP*GP*CP*GP*CP*CP*GP*A)-3'" 3045.992 1  ? ? ? ? 
2 non-polymer syn 'BARIUM ION'                             137.327  1  ? ? ? ? 
3 non-polymer syn 'Ru(TAP)2(Cl-dppz) complex'              782.177  1  ? ? ? ? 
4 water       nat water                                    18.015   81 ? ? ? ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polydeoxyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   no 
_entity_poly.pdbx_seq_one_letter_code       '(DT)(DC)(DG)(DG)(DC)(DG)(DC)(DC)(DG)(DA)' 
_entity_poly.pdbx_seq_one_letter_code_can   TCGGCGCCGA 
_entity_poly.pdbx_strand_id                 A 
_entity_poly.pdbx_target_identifier         ? 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  DT n 
1 2  DC n 
1 3  DG n 
1 4  DG n 
1 5  DC n 
1 6  DG n 
1 7  DC n 
1 8  DC n 
1 9  DG n 
1 10 DA n 
# 
_pdbx_entity_src_syn.entity_id              1 
_pdbx_entity_src_syn.pdbx_src_id            1 
_pdbx_entity_src_syn.pdbx_alt_source_flag   sample 
_pdbx_entity_src_syn.pdbx_beg_seq_num       ? 
_pdbx_entity_src_syn.pdbx_end_seq_num       ? 
_pdbx_entity_src_syn.organism_scientific    ? 
_pdbx_entity_src_syn.organism_common_name   ? 
_pdbx_entity_src_syn.ncbi_taxonomy_id       ? 
_pdbx_entity_src_syn.details                'DNA produced by ATDBio' 
# 
_struct_ref.id                         1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    4III 
_struct_ref.pdbx_db_accession          4III 
_struct_ref.entity_id                  1 
_struct_ref.pdbx_align_begin           ? 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_db_isoform            ? 
# 
_struct_ref_seq.align_id                      1 
_struct_ref_seq.ref_id                        1 
_struct_ref_seq.pdbx_PDB_id_code              4III 
_struct_ref_seq.pdbx_strand_id                A 
_struct_ref_seq.seq_align_beg                 1 
_struct_ref_seq.pdbx_seq_align_beg_ins_code   ? 
_struct_ref_seq.seq_align_end                 10 
_struct_ref_seq.pdbx_seq_align_end_ins_code   ? 
_struct_ref_seq.pdbx_db_accession             4III 
_struct_ref_seq.db_align_beg                  1 
_struct_ref_seq.pdbx_db_align_beg_ins_code    ? 
_struct_ref_seq.db_align_end                  10 
_struct_ref_seq.pdbx_db_align_end_ins_code    ? 
_struct_ref_seq.pdbx_auth_seq_align_beg       1 
_struct_ref_seq.pdbx_auth_seq_align_end       10 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
BA  non-polymer   . 'BARIUM ION'                         ? 'Ba 2'                137.327 
DA  'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P'     331.222 
DC  'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE"  ? 'C9 H14 N3 O7 P'      307.197 
DG  'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P'     347.221 
DT  'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE"         ? 'C10 H15 N2 O8 P'     322.208 
HOH non-polymer   . WATER                                ? 'H2 O'                18.015  
RCZ non-polymer   . 'Ru(TAP)2(Cl-dppz) complex'          ? 'C38 H21 Cl N12 Ru 2' 782.177 
# 
_exptl.entry_id          4III 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   1 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_Matthews      2.92 
_exptl_crystal.density_percent_sol   57.81 
_exptl_crystal.description           ? 
_exptl_crystal.F_000                 ? 
_exptl_crystal.preparation           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'VAPOR DIFFUSION, SITTING DROP' 
_exptl_crystal_grow.temp            291 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              6.3 
_exptl_crystal_grow.pdbx_details    
;1mM d(TCGGCGCCGA)2, 3mM [Ru(TAP)2(11-Cl-dppz)]2Cl, 40mM sodium cacodylate pH 6.3, 12mM spermine, 80mM KCl, 20mM BaCl2, 10% 2-methyl-2,4-pentanediol, VAPOR DIFFUSION, SITTING DROP, temperature 291K
;
_exptl_crystal_grow.pdbx_pH_range   . 
# 
_diffrn.id                     1 
_diffrn.ambient_temp           100 
_diffrn.ambient_temp_details   ? 
_diffrn.crystal_id             1 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               PIXEL 
_diffrn_detector.type                   'PSI PILATUS 6M' 
_diffrn_detector.pdbx_collection_date   2012-12-13 
_diffrn_detector.details                ? 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.monochromator                    'dual Si(111)' 
_diffrn_radiation.pdbx_diffrn_protocol             'SINGLE WAVELENGTH' 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   0.8266 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      SYNCHROTRON 
_diffrn_source.type                        'DIAMOND BEAMLINE I02' 
_diffrn_source.pdbx_synchrotron_site       Diamond 
_diffrn_source.pdbx_synchrotron_beamline   I02 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_wavelength_list        0.8266 
# 
_reflns.entry_id                     4III 
_reflns.observed_criterion_sigma_I   2 
_reflns.observed_criterion_sigma_F   ? 
_reflns.d_resolution_low             28.95 
_reflns.d_resolution_high            1.02 
_reflns.number_obs                   18496 
_reflns.number_all                   18496 
_reflns.percent_possible_obs         100 
_reflns.pdbx_Rmerge_I_obs            ? 
_reflns.pdbx_Rsym_value              ? 
_reflns.pdbx_netI_over_sigmaI        ? 
_reflns.B_iso_Wilson_estimate        ? 
_reflns.pdbx_redundancy              ? 
_reflns.R_free_details               ? 
_reflns.limit_h_max                  ? 
_reflns.limit_h_min                  ? 
_reflns.limit_k_max                  ? 
_reflns.limit_k_min                  ? 
_reflns.limit_l_max                  ? 
_reflns.limit_l_min                  ? 
_reflns.observed_criterion_F_max     ? 
_reflns.observed_criterion_F_min     ? 
_reflns.pdbx_chi_squared             ? 
_reflns.pdbx_scaling_rejects         ? 
_reflns.pdbx_ordinal                 1 
_reflns.pdbx_diffrn_id               1 
# 
_reflns_shell.d_res_high                  1.02 
_reflns_shell.d_res_low                   1.05 
_reflns_shell.percent_possible_all        99.5 
_reflns_shell.Rmerge_I_obs                ? 
_reflns_shell.pdbx_Rsym_value             ? 
_reflns_shell.meanI_over_sigI_obs         ? 
_reflns_shell.pdbx_redundancy             ? 
_reflns_shell.percent_possible_obs        ? 
_reflns_shell.number_unique_all           ? 
_reflns_shell.number_measured_all         ? 
_reflns_shell.number_measured_obs         ? 
_reflns_shell.number_unique_obs           ? 
_reflns_shell.pdbx_chi_squared            ? 
_reflns_shell.pdbx_rejects                ? 
_reflns_shell.pdbx_netI_over_sigmaI_obs   ? 
_reflns_shell.number_possible             ? 
_reflns_shell.Rmerge_F_all                ? 
_reflns_shell.Rmerge_F_obs                ? 
_reflns_shell.Rmerge_I_all                ? 
_reflns_shell.meanI_over_sigI_all         ? 
_reflns_shell.pdbx_Rrim_I_all             ? 
_reflns_shell.pdbx_Rpim_I_all             ? 
_reflns_shell.pdbx_ordinal                1 
_reflns_shell.pdbx_diffrn_id              1 
# 
_refine.entry_id                                 4III 
_refine.ls_number_reflns_obs                     17529 
_refine.ls_number_reflns_all                     17529 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          ? 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             28.93 
_refine.ls_d_res_high                            1.02 
_refine.ls_percent_reflns_obs                    97.88 
_refine.ls_R_factor_obs                          0.10142 
_refine.ls_R_factor_all                          0.10202 
_refine.ls_R_factor_R_work                       0.10142 
_refine.ls_R_factor_R_free                       0.11391 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 5.1 
_refine.ls_number_reflns_R_free                  946 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.correlation_coeff_Fo_to_Fc               0.988 
_refine.correlation_coeff_Fo_to_Fc_free          0.986 
_refine.B_iso_mean                               17.878 
_refine.aniso_B[1][1]                            -1.28 
_refine.aniso_B[2][2]                            -1.28 
_refine.aniso_B[3][3]                            2.56 
_refine.aniso_B[1][2]                            -0.00 
_refine.aniso_B[1][3]                            -0.00 
_refine.aniso_B[2][3]                            -0.00 
_refine.solvent_model_details                    'BABINET MODEL WITH MASK' 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_solvent_vdw_probe_radii             1.20 
_refine.pdbx_solvent_ion_probe_radii             0.80 
_refine.pdbx_solvent_shrinkage_radii             0.80 
_refine.pdbx_ls_cross_valid_method               THROUGHOUT 
_refine.details                                  'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' 
_refine.pdbx_starting_model                      3QRN 
_refine.pdbx_method_to_determine_struct          'MOLECULAR REPLACEMENT' 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       'MAXIMUM LIKELIHOOD' 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            RANDOM 
_refine.pdbx_overall_ESU_R                       0.019 
_refine.pdbx_overall_ESU_R_Free                  0.019 
_refine.overall_SU_ML                            0.015 
_refine.pdbx_overall_phase_error                 ? 
_refine.overall_SU_B                             0.686 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.ls_redundancy_reflns_obs                 ? 
_refine.B_iso_min                                ? 
_refine.B_iso_max                                ? 
_refine.overall_SU_R_free                        ? 
_refine.ls_wR_factor_R_free                      ? 
_refine.ls_wR_factor_R_work                      ? 
_refine.overall_FOM_free_R_set                   ? 
_refine.overall_FOM_work_R_set                   ? 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   202 
_refine_hist.pdbx_number_atoms_ligand         53 
_refine_hist.number_atoms_solvent             81 
_refine_hist.number_atoms_total               336 
_refine_hist.d_res_high                       1.02 
_refine_hist.d_res_low                        28.93 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_restraint_function 
_refine_ls_restr.pdbx_refine_id 
r_bond_refined_d             0.020  0.014 ? 405 ? 'X-RAY DIFFRACTION' 
r_bond_other_d               0.003  0.020 ? 177 ? 'X-RAY DIFFRACTION' 
r_angle_refined_deg          2.340  1.789 ? 645 ? 'X-RAY DIFFRACTION' 
r_angle_other_deg            1.570  3.000 ? 401 ? 'X-RAY DIFFRACTION' 
r_dihedral_angle_1_deg       ?      ?     ? ?   ? 'X-RAY DIFFRACTION' 
r_dihedral_angle_2_deg       ?      ?     ? ?   ? 'X-RAY DIFFRACTION' 
r_dihedral_angle_3_deg       ?      ?     ? ?   ? 'X-RAY DIFFRACTION' 
r_dihedral_angle_4_deg       ?      ?     ? ?   ? 'X-RAY DIFFRACTION' 
r_chiral_restr               0.087  0.200 ? 38  ? 'X-RAY DIFFRACTION' 
r_gen_planes_refined         0.039  0.020 ? 258 ? 'X-RAY DIFFRACTION' 
r_gen_planes_other           0.008  0.020 ? 110 ? 'X-RAY DIFFRACTION' 
r_nbd_refined                ?      ?     ? ?   ? 'X-RAY DIFFRACTION' 
r_nbd_other                  ?      ?     ? ?   ? 'X-RAY DIFFRACTION' 
r_nbtor_refined              ?      ?     ? ?   ? 'X-RAY DIFFRACTION' 
r_nbtor_other                ?      ?     ? ?   ? 'X-RAY DIFFRACTION' 
r_xyhbond_nbd_refined        ?      ?     ? ?   ? 'X-RAY DIFFRACTION' 
r_xyhbond_nbd_other          ?      ?     ? ?   ? 'X-RAY DIFFRACTION' 
r_metal_ion_refined          ?      ?     ? ?   ? 'X-RAY DIFFRACTION' 
r_metal_ion_other            ?      ?     ? ?   ? 'X-RAY DIFFRACTION' 
r_symmetry_vdw_refined       ?      ?     ? ?   ? 'X-RAY DIFFRACTION' 
r_symmetry_vdw_other         ?      ?     ? ?   ? 'X-RAY DIFFRACTION' 
r_symmetry_hbond_refined     ?      ?     ? ?   ? 'X-RAY DIFFRACTION' 
r_symmetry_hbond_other       ?      ?     ? ?   ? 'X-RAY DIFFRACTION' 
r_symmetry_metal_ion_refined ?      ?     ? ?   ? 'X-RAY DIFFRACTION' 
r_symmetry_metal_ion_other   ?      ?     ? ?   ? 'X-RAY DIFFRACTION' 
r_mcbond_it                  ?      ?     ? ?   ? 'X-RAY DIFFRACTION' 
r_mcbond_other               ?      ?     ? ?   ? 'X-RAY DIFFRACTION' 
r_mcangle_it                 ?      ?     ? ?   ? 'X-RAY DIFFRACTION' 
r_scbond_it                  ?      ?     ? ?   ? 'X-RAY DIFFRACTION' 
r_scangle_it                 ?      ?     ? ?   ? 'X-RAY DIFFRACTION' 
r_rigid_bond_restr           6.891  3.000 ? 581 ? 'X-RAY DIFFRACTION' 
r_sphericity_free            28.455 5.000 ? 13  ? 'X-RAY DIFFRACTION' 
r_sphericity_bonded          15.716 5.000 ? 595 ? 'X-RAY DIFFRACTION' 
# 
_refine_ls_shell.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_ls_shell.pdbx_total_number_of_bins_used   20 
_refine_ls_shell.d_res_high                       1.021 
_refine_ls_shell.d_res_low                        1.048 
_refine_ls_shell.number_reflns_R_work             1273 
_refine_ls_shell.R_factor_R_work                  0.232 
_refine_ls_shell.percent_reflns_obs               99.27 
_refine_ls_shell.R_factor_R_free                  0.215 
_refine_ls_shell.R_factor_R_free_error            ? 
_refine_ls_shell.percent_reflns_R_free            ? 
_refine_ls_shell.number_reflns_R_free             78 
_refine_ls_shell.number_reflns_all                ? 
_refine_ls_shell.R_factor_all                     ? 
_refine_ls_shell.number_reflns_obs                ? 
_refine_ls_shell.redundancy_reflns_obs            ? 
# 
_struct.entry_id                  4III 
_struct.title                     'Lambda-[Ru(TAP)2(11-Cl-dppz)] with a DNA decamer at atomic resolution' 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        4III 
_struct_keywords.pdbx_keywords   DNA 
_struct_keywords.text            'Duplex, Ruthenium, DNA' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 2 ? 
C N N 3 ? 
D N N 4 ? 
# 
_struct_biol.id        1 
_struct_biol.details   ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
metalc1  metalc ? ? A DG 4 O6 ? ? ? 1_555 B BA  . BA ? ? A DG 4   A BA  101 1_555 ? ? ? ? ? ? ?            2.843 ? ? 
metalc2  metalc ? ? B BA . BA ? ? ? 1_555 D HOH . O  ? ? A BA 101 A HOH 201 1_555 ? ? ? ? ? ? ?            2.801 ? ? 
metalc3  metalc ? ? B BA . BA ? ? ? 1_555 D HOH . O  ? ? A BA 101 A HOH 202 1_555 ? ? ? ? ? ? ?            2.798 ? ? 
metalc4  metalc ? ? B BA . BA ? ? ? 1_555 D HOH . O  ? ? A BA 101 A HOH 204 1_555 ? ? ? ? ? ? ?            2.768 ? ? 
metalc5  metalc ? ? B BA . BA ? ? ? 1_555 D HOH . O  ? ? A BA 101 A HOH 213 1_555 ? ? ? ? ? ? ?            2.783 ? ? 
metalc6  metalc ? ? B BA . BA ? ? ? 1_555 D HOH . O  ? ? A BA 101 A HOH 231 1_555 ? ? ? ? ? ? ?            2.809 ? ? 
hydrog1  hydrog ? ? A DC 2 N3 ? ? ? 1_555 A DG  9 N1 A ? A DC 2   A DG  9   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog2  hydrog ? ? A DC 2 N4 ? ? ? 1_555 A DG  9 O6 A ? A DC 2   A DG  9   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog3  hydrog ? ? A DC 2 O2 ? ? ? 1_555 A DG  9 N2 A ? A DC 2   A DG  9   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog4  hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DC  8 N3 ? ? A DG 3   A DC  8   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog5  hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DC  8 O2 ? ? A DG 3   A DC  8   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog6  hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DC  8 N4 ? ? A DG 3   A DC  8   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog7  hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DC  7 N3 ? ? A DG 4   A DC  7   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog8  hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DC  7 O2 ? ? A DG 4   A DC  7   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog9  hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DC  7 N4 ? ? A DG 4   A DC  7   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog10 hydrog ? ? A DC 5 N3 ? ? ? 1_555 A DG  6 N1 ? ? A DC 5   A DG  6   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog11 hydrog ? ? A DC 5 N4 ? ? ? 1_555 A DG  6 O6 ? ? A DC 5   A DG  6   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog12 hydrog ? ? A DC 5 O2 ? ? ? 1_555 A DG  6 N2 ? ? A DC 5   A DG  6   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog13 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DC  5 N3 ? ? A DG 6   A DC  5   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog14 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DC  5 O2 ? ? A DG 6   A DC  5   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog15 hydrog ? ? A DG 6 O6 ? ? ? 1_555 A DC  5 N4 ? ? A DG 6   A DC  5   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog16 hydrog ? ? A DC 7 N3 ? ? ? 1_555 A DG  4 N1 ? ? A DC 7   A DG  4   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog17 hydrog ? ? A DC 7 N4 ? ? ? 1_555 A DG  4 O6 ? ? A DC 7   A DG  4   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog18 hydrog ? ? A DC 7 O2 ? ? ? 1_555 A DG  4 N2 ? ? A DC 7   A DG  4   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog19 hydrog ? ? A DC 8 N3 ? ? ? 1_555 A DG  3 N1 ? ? A DC 8   A DG  3   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog20 hydrog ? ? A DC 8 N4 ? ? ? 1_555 A DG  3 O6 ? ? A DC 8   A DG  3   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog21 hydrog ? ? A DC 8 O2 ? ? ? 1_555 A DG  3 N2 ? ? A DC 8   A DG  3   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog22 hydrog ? ? A DG 9 N1 A ? ? 1_555 A DC  2 N3 ? ? A DG 9   A DC  2   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog23 hydrog ? ? A DG 9 N2 A ? ? 1_555 A DC  2 O2 ? ? A DG 9   A DC  2   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog24 hydrog ? ? A DG 9 O6 A ? ? 1_555 A DC  2 N4 ? ? A DG 9   A DC  2   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
metalc ? ? 
hydrog ? ? 
# 
loop_
_struct_site.id 
_struct_site.pdbx_evidence_code 
_struct_site.pdbx_auth_asym_id 
_struct_site.pdbx_auth_comp_id 
_struct_site.pdbx_auth_seq_id 
_struct_site.pdbx_auth_ins_code 
_struct_site.pdbx_num_residues 
_struct_site.details 
AC1 Software A BA  101 ? 8  'BINDING SITE FOR RESIDUE BA A 101'  
AC2 Software A RCZ 102 ? 13 'BINDING SITE FOR RESIDUE RCZ A 102' 
# 
loop_
_struct_site_gen.id 
_struct_site_gen.site_id 
_struct_site_gen.pdbx_num_res 
_struct_site_gen.label_comp_id 
_struct_site_gen.label_asym_id 
_struct_site_gen.label_seq_id 
_struct_site_gen.pdbx_auth_ins_code 
_struct_site_gen.auth_comp_id 
_struct_site_gen.auth_asym_id 
_struct_site_gen.auth_seq_id 
_struct_site_gen.label_atom_id 
_struct_site_gen.label_alt_id 
_struct_site_gen.symmetry 
_struct_site_gen.details 
1  AC1 8  DG  A 3  ? DG  A 3   . ? 1_555 ? 
2  AC1 8  DG  A 4  ? DG  A 4   . ? 1_555 ? 
3  AC1 8  HOH D .  ? HOH A 201 . ? 1_555 ? 
4  AC1 8  HOH D .  ? HOH A 202 . ? 1_555 ? 
5  AC1 8  HOH D .  ? HOH A 203 . ? 7_555 ? 
6  AC1 8  HOH D .  ? HOH A 204 . ? 1_555 ? 
7  AC1 8  HOH D .  ? HOH A 213 . ? 1_555 ? 
8  AC1 8  HOH D .  ? HOH A 231 . ? 1_555 ? 
9  AC2 13 DT  A 1  ? DT  A 1   . ? 7_555 ? 
10 AC2 13 DC  A 2  ? DC  A 2   . ? 7_555 ? 
11 AC2 13 DG  A 3  ? DG  A 3   . ? 7_555 ? 
12 AC2 13 DG  A 3  ? DG  A 3   . ? 5_444 ? 
13 AC2 13 DG  A 4  ? DG  A 4   . ? 5_444 ? 
14 AC2 13 DC  A 5  ? DC  A 5   . ? 5_444 ? 
15 AC2 13 DC  A 7  ? DC  A 7   . ? 3_444 ? 
16 AC2 13 DC  A 8  ? DC  A 8   . ? 3_444 ? 
17 AC2 13 DG  A 9  ? DG  A 9   . ? 1_555 ? 
18 AC2 13 DA  A 10 ? DA  A 10  . ? 3_444 ? 
19 AC2 13 HOH D .  ? HOH A 224 . ? 1_555 ? 
20 AC2 13 HOH D .  ? HOH A 250 . ? 3_444 ? 
21 AC2 13 HOH D .  ? HOH A 265 . ? 1_555 ? 
# 
_database_PDB_matrix.entry_id          4III 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_atom_sites.entry_id                    4III 
_atom_sites.fract_transf_matrix[1][1]   0.023618 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   -0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.023618 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   -0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.025233 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
BA 
C  
CL 
H  
N  
O  
P  
RU 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  DT 1  1  1  DT DT A . n 
A 1 2  DC 2  2  2  DC DC A . n 
A 1 3  DG 3  3  3  DG DG A . n 
A 1 4  DG 4  4  4  DG DG A . n 
A 1 5  DC 5  5  5  DC DC A . n 
A 1 6  DG 6  6  6  DG DG A . n 
A 1 7  DC 7  7  7  DC DC A . n 
A 1 8  DC 8  8  8  DC DC A . n 
A 1 9  DG 9  9  9  DG DG A . n 
A 1 10 DA 10 10 10 DA DA A . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
B 2 BA  1  101 1  BA  BA  A . 
C 3 RCZ 1  102 1  RCZ RPC A . 
D 4 HOH 1  201 1  HOH HOH A . 
D 4 HOH 2  202 2  HOH HOH A . 
D 4 HOH 3  203 3  HOH HOH A . 
D 4 HOH 4  204 5  HOH HOH A . 
D 4 HOH 5  205 6  HOH HOH A . 
D 4 HOH 6  206 7  HOH HOH A . 
D 4 HOH 7  207 8  HOH HOH A . 
D 4 HOH 8  208 9  HOH HOH A . 
D 4 HOH 9  209 10 HOH HOH A . 
D 4 HOH 10 210 11 HOH HOH A . 
D 4 HOH 11 211 12 HOH HOH A . 
D 4 HOH 12 212 13 HOH HOH A . 
D 4 HOH 13 213 14 HOH HOH A . 
D 4 HOH 14 214 15 HOH HOH A . 
D 4 HOH 15 215 16 HOH HOH A . 
D 4 HOH 16 216 17 HOH HOH A . 
D 4 HOH 17 217 18 HOH HOH A . 
D 4 HOH 18 218 19 HOH HOH A . 
D 4 HOH 19 219 20 HOH HOH A . 
D 4 HOH 20 220 21 HOH HOH A . 
D 4 HOH 21 221 22 HOH HOH A . 
D 4 HOH 22 222 23 HOH HOH A . 
D 4 HOH 23 223 24 HOH HOH A . 
D 4 HOH 24 224 25 HOH HOH A . 
D 4 HOH 25 225 26 HOH HOH A . 
D 4 HOH 26 226 27 HOH HOH A . 
D 4 HOH 27 227 28 HOH HOH A . 
D 4 HOH 28 228 29 HOH HOH A . 
D 4 HOH 29 229 31 HOH HOH A . 
D 4 HOH 30 230 32 HOH HOH A . 
D 4 HOH 31 231 33 HOH HOH A . 
D 4 HOH 32 232 34 HOH HOH A . 
D 4 HOH 33 233 35 HOH HOH A . 
D 4 HOH 34 234 36 HOH HOH A . 
D 4 HOH 35 235 37 HOH HOH A . 
D 4 HOH 36 236 38 HOH HOH A . 
D 4 HOH 37 237 39 HOH HOH A . 
D 4 HOH 38 238 40 HOH HOH A . 
D 4 HOH 39 239 41 HOH HOH A . 
D 4 HOH 40 240 42 HOH HOH A . 
D 4 HOH 41 241 43 HOH HOH A . 
D 4 HOH 42 242 44 HOH HOH A . 
D 4 HOH 43 243 45 HOH HOH A . 
D 4 HOH 44 244 46 HOH HOH A . 
D 4 HOH 45 245 47 HOH HOH A . 
D 4 HOH 46 246 48 HOH HOH A . 
D 4 HOH 47 247 49 HOH HOH A . 
D 4 HOH 48 248 50 HOH HOH A . 
D 4 HOH 49 249 51 HOH HOH A . 
D 4 HOH 50 250 52 HOH HOH A . 
D 4 HOH 51 251 53 HOH HOH A . 
D 4 HOH 52 252 55 HOH HOH A . 
D 4 HOH 53 253 56 HOH HOH A . 
D 4 HOH 54 254 57 HOH HOH A . 
D 4 HOH 55 255 58 HOH HOH A . 
D 4 HOH 56 256 59 HOH HOH A . 
D 4 HOH 57 257 60 HOH HOH A . 
D 4 HOH 58 258 61 HOH HOH A . 
D 4 HOH 59 259 62 HOH HOH A . 
D 4 HOH 60 260 63 HOH HOH A . 
D 4 HOH 61 261 65 HOH HOH A . 
D 4 HOH 62 262 67 HOH HOH A . 
D 4 HOH 63 263 70 HOH HOH A . 
D 4 HOH 64 264 75 HOH HOH A . 
D 4 HOH 65 265 76 HOH HOH A . 
D 4 HOH 66 266 77 HOH HOH A . 
D 4 HOH 67 267 78 HOH HOH A . 
D 4 HOH 68 268 79 HOH HOH A . 
D 4 HOH 69 269 80 HOH HOH A . 
D 4 HOH 70 270 81 HOH HOH A . 
D 4 HOH 71 271 82 HOH HOH A . 
D 4 HOH 72 272 84 HOH HOH A . 
D 4 HOH 73 273 85 HOH HOH A . 
D 4 HOH 74 274 86 HOH HOH A . 
D 4 HOH 75 275 87 HOH HOH A . 
D 4 HOH 76 276 88 HOH HOH A . 
D 4 HOH 77 277 89 HOH HOH A . 
D 4 HOH 78 278 90 HOH HOH A . 
D 4 HOH 79 279 91 HOH HOH A . 
D 4 HOH 80 280 92 HOH HOH A . 
D 4 HOH 81 281 93 HOH HOH A . 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_and_software_defined_assembly 
_pdbx_struct_assembly.method_details       PISA 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1,2 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C,D 
# 
loop_
_pdbx_struct_assembly_prop.biol_id 
_pdbx_struct_assembly_prop.type 
_pdbx_struct_assembly_prop.value 
_pdbx_struct_assembly_prop.details 
1 'ABSA (A^2)' 1950 ? 
1 MORE         -26  ? 
1 'SSA (A^2)'  4600 ? 
# 
loop_
_pdbx_struct_oper_list.id 
_pdbx_struct_oper_list.type 
_pdbx_struct_oper_list.name 
_pdbx_struct_oper_list.symmetry_operation 
_pdbx_struct_oper_list.matrix[1][1] 
_pdbx_struct_oper_list.matrix[1][2] 
_pdbx_struct_oper_list.matrix[1][3] 
_pdbx_struct_oper_list.vector[1] 
_pdbx_struct_oper_list.matrix[2][1] 
_pdbx_struct_oper_list.matrix[2][2] 
_pdbx_struct_oper_list.matrix[2][3] 
_pdbx_struct_oper_list.vector[2] 
_pdbx_struct_oper_list.matrix[3][1] 
_pdbx_struct_oper_list.matrix[3][2] 
_pdbx_struct_oper_list.matrix[3][3] 
_pdbx_struct_oper_list.vector[3] 
1 'identity operation'         1_555 x,y,z  1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000  0.0000000000 
2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 
# 
loop_
_pdbx_struct_conn_angle.id 
_pdbx_struct_conn_angle.ptnr1_label_atom_id 
_pdbx_struct_conn_angle.ptnr1_label_alt_id 
_pdbx_struct_conn_angle.ptnr1_label_asym_id 
_pdbx_struct_conn_angle.ptnr1_label_comp_id 
_pdbx_struct_conn_angle.ptnr1_label_seq_id 
_pdbx_struct_conn_angle.ptnr1_auth_atom_id 
_pdbx_struct_conn_angle.ptnr1_auth_asym_id 
_pdbx_struct_conn_angle.ptnr1_auth_comp_id 
_pdbx_struct_conn_angle.ptnr1_auth_seq_id 
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr1_symmetry 
_pdbx_struct_conn_angle.ptnr2_label_atom_id 
_pdbx_struct_conn_angle.ptnr2_label_alt_id 
_pdbx_struct_conn_angle.ptnr2_label_asym_id 
_pdbx_struct_conn_angle.ptnr2_label_comp_id 
_pdbx_struct_conn_angle.ptnr2_label_seq_id 
_pdbx_struct_conn_angle.ptnr2_auth_atom_id 
_pdbx_struct_conn_angle.ptnr2_auth_asym_id 
_pdbx_struct_conn_angle.ptnr2_auth_comp_id 
_pdbx_struct_conn_angle.ptnr2_auth_seq_id 
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr2_symmetry 
_pdbx_struct_conn_angle.ptnr3_label_atom_id 
_pdbx_struct_conn_angle.ptnr3_label_alt_id 
_pdbx_struct_conn_angle.ptnr3_label_asym_id 
_pdbx_struct_conn_angle.ptnr3_label_comp_id 
_pdbx_struct_conn_angle.ptnr3_label_seq_id 
_pdbx_struct_conn_angle.ptnr3_auth_atom_id 
_pdbx_struct_conn_angle.ptnr3_auth_asym_id 
_pdbx_struct_conn_angle.ptnr3_auth_comp_id 
_pdbx_struct_conn_angle.ptnr3_auth_seq_id 
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr3_symmetry 
_pdbx_struct_conn_angle.value 
_pdbx_struct_conn_angle.value_esd 
1  O6 ? A DG  4 ? A DG  4   ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? D HOH . ? A HOH 201 ? 1_555 138.5 ? 
2  O6 ? A DG  4 ? A DG  4   ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? D HOH . ? A HOH 202 ? 1_555 127.3 ? 
3  O  ? D HOH . ? A HOH 201 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? D HOH . ? A HOH 202 ? 1_555 67.3  ? 
4  O6 ? A DG  4 ? A DG  4   ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? D HOH . ? A HOH 204 ? 1_555 71.0  ? 
5  O  ? D HOH . ? A HOH 201 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? D HOH . ? A HOH 204 ? 1_555 76.7  ? 
6  O  ? D HOH . ? A HOH 202 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? D HOH . ? A HOH 204 ? 1_555 139.3 ? 
7  O6 ? A DG  4 ? A DG  4   ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? D HOH . ? A HOH 213 ? 1_555 106.6 ? 
8  O  ? D HOH . ? A HOH 201 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? D HOH . ? A HOH 213 ? 1_555 114.4 ? 
9  O  ? D HOH . ? A HOH 202 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? D HOH . ? A HOH 213 ? 1_555 67.3  ? 
10 O  ? D HOH . ? A HOH 204 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? D HOH . ? A HOH 213 ? 1_555 149.4 ? 
11 O6 ? A DG  4 ? A DG  4   ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? D HOH . ? A HOH 231 ? 1_555 123.9 ? 
12 O  ? D HOH . ? A HOH 201 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? D HOH . ? A HOH 231 ? 1_555 71.2  ? 
13 O  ? D HOH . ? A HOH 202 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? D HOH . ? A HOH 231 ? 1_555 106.9 ? 
14 O  ? D HOH . ? A HOH 204 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? D HOH . ? A HOH 231 ? 1_555 77.2  ? 
15 O  ? D HOH . ? A HOH 213 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O ? D HOH . ? A HOH 231 ? 1_555 79.9  ? 
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2013-07-17 
2 'Structure model' 1 1 2023-11-08 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Data collection'        
2 2 'Structure model' 'Database references'    
3 2 'Structure model' 'Derived calculations'   
4 2 'Structure model' 'Refinement description' 
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 2 'Structure model' chem_comp_atom                
2 2 'Structure model' chem_comp_bond                
3 2 'Structure model' database_2                    
4 2 'Structure model' pdbx_initial_refinement_model 
5 2 'Structure model' pdbx_struct_conn_angle        
6 2 'Structure model' struct_conn                   
7 2 'Structure model' struct_site                   
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1  2 'Structure model' '_database_2.pdbx_DOI'                        
2  2 'Structure model' '_database_2.pdbx_database_accession'         
3  2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id'  
4  2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'   
5  2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 
6  2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 
7  2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 
8  2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'  
9  2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id'  
10 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'   
11 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 
12 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 
13 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 
14 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id'  
15 2 'Structure model' '_pdbx_struct_conn_angle.value'               
16 2 'Structure model' '_struct_conn.pdbx_dist_value'                
17 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id'             
18 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id'              
19 2 'Structure model' '_struct_conn.ptnr1_label_asym_id'            
20 2 'Structure model' '_struct_conn.ptnr1_label_atom_id'            
21 2 'Structure model' '_struct_conn.ptnr1_label_comp_id'            
22 2 'Structure model' '_struct_conn.ptnr1_label_seq_id'             
23 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id'             
24 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id'              
25 2 'Structure model' '_struct_conn.ptnr2_label_asym_id'            
26 2 'Structure model' '_struct_conn.ptnr2_label_atom_id'            
27 2 'Structure model' '_struct_conn.ptnr2_label_comp_id'            
28 2 'Structure model' '_struct_site.pdbx_auth_asym_id'              
29 2 'Structure model' '_struct_site.pdbx_auth_comp_id'              
30 2 'Structure model' '_struct_site.pdbx_auth_seq_id'               
# 
loop_
_software.name 
_software.classification 
_software.version 
_software.citation_id 
_software.pdbx_ordinal 
GDA    'data collection' .        ? 1 
PHASER phasing           .        ? 2 
REFMAC refinement        5.7.0029 ? 3 
XDS    'data reduction'  .        ? 4 
SCALA  'data scaling'    .        ? 5 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1 1 "O4'" A DC 5  ? ? "C4'" A DC 5  ? ? "C3'" A DC 5  ? ? 101.33 104.50 -3.17 0.40 N 
2 1 "C1'" A DC 5  ? ? "O4'" A DC 5  ? ? "C4'" A DC 5  ? ? 114.51 110.30 4.21  0.70 N 
3 1 "O5'" A DA 10 ? A P     A DA 10 ? A OP1   A DA 10 ? A 98.31  105.70 -7.39 0.90 N 
4 1 "O5'" A DA 10 ? A "C5'" A DA 10 ? A "C4'" A DA 10 ? A 104.20 109.40 -5.20 0.80 N 
# 
_pdbx_validate_planes.id              1 
_pdbx_validate_planes.PDB_model_num   1 
_pdbx_validate_planes.auth_comp_id    DC 
_pdbx_validate_planes.auth_asym_id    A 
_pdbx_validate_planes.auth_seq_id     5 
_pdbx_validate_planes.PDB_ins_code    ? 
_pdbx_validate_planes.label_alt_id    ? 
_pdbx_validate_planes.rmsd            0.124 
_pdbx_validate_planes.type            'SIDE CHAIN' 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
BA  BA     BA N N 1   
DA  OP3    O  N N 2   
DA  P      P  N N 3   
DA  OP1    O  N N 4   
DA  OP2    O  N N 5   
DA  "O5'"  O  N N 6   
DA  "C5'"  C  N N 7   
DA  "C4'"  C  N R 8   
DA  "O4'"  O  N N 9   
DA  "C3'"  C  N S 10  
DA  "O3'"  O  N N 11  
DA  "C2'"  C  N N 12  
DA  "C1'"  C  N R 13  
DA  N9     N  Y N 14  
DA  C8     C  Y N 15  
DA  N7     N  Y N 16  
DA  C5     C  Y N 17  
DA  C6     C  Y N 18  
DA  N6     N  N N 19  
DA  N1     N  Y N 20  
DA  C2     C  Y N 21  
DA  N3     N  Y N 22  
DA  C4     C  Y N 23  
DA  HOP3   H  N N 24  
DA  HOP2   H  N N 25  
DA  "H5'"  H  N N 26  
DA  "H5''" H  N N 27  
DA  "H4'"  H  N N 28  
DA  "H3'"  H  N N 29  
DA  "HO3'" H  N N 30  
DA  "H2'"  H  N N 31  
DA  "H2''" H  N N 32  
DA  "H1'"  H  N N 33  
DA  H8     H  N N 34  
DA  H61    H  N N 35  
DA  H62    H  N N 36  
DA  H2     H  N N 37  
DC  OP3    O  N N 38  
DC  P      P  N N 39  
DC  OP1    O  N N 40  
DC  OP2    O  N N 41  
DC  "O5'"  O  N N 42  
DC  "C5'"  C  N N 43  
DC  "C4'"  C  N R 44  
DC  "O4'"  O  N N 45  
DC  "C3'"  C  N S 46  
DC  "O3'"  O  N N 47  
DC  "C2'"  C  N N 48  
DC  "C1'"  C  N R 49  
DC  N1     N  N N 50  
DC  C2     C  N N 51  
DC  O2     O  N N 52  
DC  N3     N  N N 53  
DC  C4     C  N N 54  
DC  N4     N  N N 55  
DC  C5     C  N N 56  
DC  C6     C  N N 57  
DC  HOP3   H  N N 58  
DC  HOP2   H  N N 59  
DC  "H5'"  H  N N 60  
DC  "H5''" H  N N 61  
DC  "H4'"  H  N N 62  
DC  "H3'"  H  N N 63  
DC  "HO3'" H  N N 64  
DC  "H2'"  H  N N 65  
DC  "H2''" H  N N 66  
DC  "H1'"  H  N N 67  
DC  H41    H  N N 68  
DC  H42    H  N N 69  
DC  H5     H  N N 70  
DC  H6     H  N N 71  
DG  OP3    O  N N 72  
DG  P      P  N N 73  
DG  OP1    O  N N 74  
DG  OP2    O  N N 75  
DG  "O5'"  O  N N 76  
DG  "C5'"  C  N N 77  
DG  "C4'"  C  N R 78  
DG  "O4'"  O  N N 79  
DG  "C3'"  C  N S 80  
DG  "O3'"  O  N N 81  
DG  "C2'"  C  N N 82  
DG  "C1'"  C  N R 83  
DG  N9     N  Y N 84  
DG  C8     C  Y N 85  
DG  N7     N  Y N 86  
DG  C5     C  Y N 87  
DG  C6     C  N N 88  
DG  O6     O  N N 89  
DG  N1     N  N N 90  
DG  C2     C  N N 91  
DG  N2     N  N N 92  
DG  N3     N  N N 93  
DG  C4     C  Y N 94  
DG  HOP3   H  N N 95  
DG  HOP2   H  N N 96  
DG  "H5'"  H  N N 97  
DG  "H5''" H  N N 98  
DG  "H4'"  H  N N 99  
DG  "H3'"  H  N N 100 
DG  "HO3'" H  N N 101 
DG  "H2'"  H  N N 102 
DG  "H2''" H  N N 103 
DG  "H1'"  H  N N 104 
DG  H8     H  N N 105 
DG  H1     H  N N 106 
DG  H21    H  N N 107 
DG  H22    H  N N 108 
DT  OP3    O  N N 109 
DT  P      P  N N 110 
DT  OP1    O  N N 111 
DT  OP2    O  N N 112 
DT  "O5'"  O  N N 113 
DT  "C5'"  C  N N 114 
DT  "C4'"  C  N R 115 
DT  "O4'"  O  N N 116 
DT  "C3'"  C  N S 117 
DT  "O3'"  O  N N 118 
DT  "C2'"  C  N N 119 
DT  "C1'"  C  N R 120 
DT  N1     N  N N 121 
DT  C2     C  N N 122 
DT  O2     O  N N 123 
DT  N3     N  N N 124 
DT  C4     C  N N 125 
DT  O4     O  N N 126 
DT  C5     C  N N 127 
DT  C7     C  N N 128 
DT  C6     C  N N 129 
DT  HOP3   H  N N 130 
DT  HOP2   H  N N 131 
DT  "H5'"  H  N N 132 
DT  "H5''" H  N N 133 
DT  "H4'"  H  N N 134 
DT  "H3'"  H  N N 135 
DT  "HO3'" H  N N 136 
DT  "H2'"  H  N N 137 
DT  "H2''" H  N N 138 
DT  "H1'"  H  N N 139 
DT  H3     H  N N 140 
DT  H71    H  N N 141 
DT  H72    H  N N 142 
DT  H73    H  N N 143 
DT  H6     H  N N 144 
HOH O      O  N N 145 
HOH H1     H  N N 146 
HOH H2     H  N N 147 
RCZ N1     N  Y N 148 
RCZ C6     C  Y N 149 
RCZ C5     C  Y N 150 
RCZ C4     C  Y N 151 
RCZ N4     N  Y N 152 
RCZ N3     N  Y N 153 
RCZ C2     C  Y N 154 
RCZ CL     CL N N 155 
RCZ C18    C  Y N 156 
RCZ C14    C  Y N 157 
RCZ C13    C  Y N 158 
RCZ C15    C  Y N 159 
RCZ C16    C  Y N 160 
RCZ C17    C  Y N 161 
RCZ C7     C  Y N 162 
RCZ C8     C  Y N 163 
RCZ C9     C  Y N 164 
RCZ C11    C  Y N 165 
RCZ C12    C  Y N 166 
RCZ C10    C  Y N 167 
RCZ RU     RU N N 168 
RCZ N2     N  Y N 169 
RCZ C3     C  Y N 170 
RCZ C1     C  Y N 171 
RCZ N5     N  Y N 172 
RCZ C20    C  Y N 173 
RCZ C21    C  Y N 174 
RCZ N6     N  Y N 175 
RCZ C19    C  Y N 176 
RCZ C22    C  Y N 177 
RCZ C23    C  Y N 178 
RCZ C24    C  Y N 179 
RCZ C25    C  Y N 180 
RCZ N7     N  Y N 181 
RCZ C27    C  Y N 182 
RCZ C28    C  Y N 183 
RCZ C26    C  Y N 184 
RCZ N8     N  Y N 185 
RCZ N9     N  Y N 186 
RCZ C30    C  Y N 187 
RCZ C31    C  Y N 188 
RCZ N10    N  Y N 189 
RCZ C32    C  Y N 190 
RCZ C29    C  Y N 191 
RCZ C33    C  Y N 192 
RCZ C34    C  Y N 193 
RCZ C35    C  Y N 194 
RCZ C36    C  Y N 195 
RCZ N12    N  Y N 196 
RCZ N11    N  Y N 197 
RCZ C37    C  Y N 198 
RCZ C38    C  Y N 199 
RCZ H4     H  N N 200 
RCZ H2     H  N N 201 
RCZ H14    H  N N 202 
RCZ H16    H  N N 203 
RCZ H17    H  N N 204 
RCZ H9     H  N N 205 
RCZ H11    H  N N 206 
RCZ H12    H  N N 207 
RCZ H3     H  N N 208 
RCZ H20    H  N N 209 
RCZ H21    H  N N 210 
RCZ H23    H  N N 211 
RCZ H24    H  N N 212 
RCZ H27    H  N N 213 
RCZ H28    H  N N 214 
RCZ H30    H  N N 215 
RCZ H31    H  N N 216 
RCZ H33    H  N N 217 
RCZ H34    H  N N 218 
RCZ H37    H  N N 219 
RCZ H38    H  N N 220 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DA  OP3   P      sing N N 1   
DA  OP3   HOP3   sing N N 2   
DA  P     OP1    doub N N 3   
DA  P     OP2    sing N N 4   
DA  P     "O5'"  sing N N 5   
DA  OP2   HOP2   sing N N 6   
DA  "O5'" "C5'"  sing N N 7   
DA  "C5'" "C4'"  sing N N 8   
DA  "C5'" "H5'"  sing N N 9   
DA  "C5'" "H5''" sing N N 10  
DA  "C4'" "O4'"  sing N N 11  
DA  "C4'" "C3'"  sing N N 12  
DA  "C4'" "H4'"  sing N N 13  
DA  "O4'" "C1'"  sing N N 14  
DA  "C3'" "O3'"  sing N N 15  
DA  "C3'" "C2'"  sing N N 16  
DA  "C3'" "H3'"  sing N N 17  
DA  "O3'" "HO3'" sing N N 18  
DA  "C2'" "C1'"  sing N N 19  
DA  "C2'" "H2'"  sing N N 20  
DA  "C2'" "H2''" sing N N 21  
DA  "C1'" N9     sing N N 22  
DA  "C1'" "H1'"  sing N N 23  
DA  N9    C8     sing Y N 24  
DA  N9    C4     sing Y N 25  
DA  C8    N7     doub Y N 26  
DA  C8    H8     sing N N 27  
DA  N7    C5     sing Y N 28  
DA  C5    C6     sing Y N 29  
DA  C5    C4     doub Y N 30  
DA  C6    N6     sing N N 31  
DA  C6    N1     doub Y N 32  
DA  N6    H61    sing N N 33  
DA  N6    H62    sing N N 34  
DA  N1    C2     sing Y N 35  
DA  C2    N3     doub Y N 36  
DA  C2    H2     sing N N 37  
DA  N3    C4     sing Y N 38  
DC  OP3   P      sing N N 39  
DC  OP3   HOP3   sing N N 40  
DC  P     OP1    doub N N 41  
DC  P     OP2    sing N N 42  
DC  P     "O5'"  sing N N 43  
DC  OP2   HOP2   sing N N 44  
DC  "O5'" "C5'"  sing N N 45  
DC  "C5'" "C4'"  sing N N 46  
DC  "C5'" "H5'"  sing N N 47  
DC  "C5'" "H5''" sing N N 48  
DC  "C4'" "O4'"  sing N N 49  
DC  "C4'" "C3'"  sing N N 50  
DC  "C4'" "H4'"  sing N N 51  
DC  "O4'" "C1'"  sing N N 52  
DC  "C3'" "O3'"  sing N N 53  
DC  "C3'" "C2'"  sing N N 54  
DC  "C3'" "H3'"  sing N N 55  
DC  "O3'" "HO3'" sing N N 56  
DC  "C2'" "C1'"  sing N N 57  
DC  "C2'" "H2'"  sing N N 58  
DC  "C2'" "H2''" sing N N 59  
DC  "C1'" N1     sing N N 60  
DC  "C1'" "H1'"  sing N N 61  
DC  N1    C2     sing N N 62  
DC  N1    C6     sing N N 63  
DC  C2    O2     doub N N 64  
DC  C2    N3     sing N N 65  
DC  N3    C4     doub N N 66  
DC  C4    N4     sing N N 67  
DC  C4    C5     sing N N 68  
DC  N4    H41    sing N N 69  
DC  N4    H42    sing N N 70  
DC  C5    C6     doub N N 71  
DC  C5    H5     sing N N 72  
DC  C6    H6     sing N N 73  
DG  OP3   P      sing N N 74  
DG  OP3   HOP3   sing N N 75  
DG  P     OP1    doub N N 76  
DG  P     OP2    sing N N 77  
DG  P     "O5'"  sing N N 78  
DG  OP2   HOP2   sing N N 79  
DG  "O5'" "C5'"  sing N N 80  
DG  "C5'" "C4'"  sing N N 81  
DG  "C5'" "H5'"  sing N N 82  
DG  "C5'" "H5''" sing N N 83  
DG  "C4'" "O4'"  sing N N 84  
DG  "C4'" "C3'"  sing N N 85  
DG  "C4'" "H4'"  sing N N 86  
DG  "O4'" "C1'"  sing N N 87  
DG  "C3'" "O3'"  sing N N 88  
DG  "C3'" "C2'"  sing N N 89  
DG  "C3'" "H3'"  sing N N 90  
DG  "O3'" "HO3'" sing N N 91  
DG  "C2'" "C1'"  sing N N 92  
DG  "C2'" "H2'"  sing N N 93  
DG  "C2'" "H2''" sing N N 94  
DG  "C1'" N9     sing N N 95  
DG  "C1'" "H1'"  sing N N 96  
DG  N9    C8     sing Y N 97  
DG  N9    C4     sing Y N 98  
DG  C8    N7     doub Y N 99  
DG  C8    H8     sing N N 100 
DG  N7    C5     sing Y N 101 
DG  C5    C6     sing N N 102 
DG  C5    C4     doub Y N 103 
DG  C6    O6     doub N N 104 
DG  C6    N1     sing N N 105 
DG  N1    C2     sing N N 106 
DG  N1    H1     sing N N 107 
DG  C2    N2     sing N N 108 
DG  C2    N3     doub N N 109 
DG  N2    H21    sing N N 110 
DG  N2    H22    sing N N 111 
DG  N3    C4     sing N N 112 
DT  OP3   P      sing N N 113 
DT  OP3   HOP3   sing N N 114 
DT  P     OP1    doub N N 115 
DT  P     OP2    sing N N 116 
DT  P     "O5'"  sing N N 117 
DT  OP2   HOP2   sing N N 118 
DT  "O5'" "C5'"  sing N N 119 
DT  "C5'" "C4'"  sing N N 120 
DT  "C5'" "H5'"  sing N N 121 
DT  "C5'" "H5''" sing N N 122 
DT  "C4'" "O4'"  sing N N 123 
DT  "C4'" "C3'"  sing N N 124 
DT  "C4'" "H4'"  sing N N 125 
DT  "O4'" "C1'"  sing N N 126 
DT  "C3'" "O3'"  sing N N 127 
DT  "C3'" "C2'"  sing N N 128 
DT  "C3'" "H3'"  sing N N 129 
DT  "O3'" "HO3'" sing N N 130 
DT  "C2'" "C1'"  sing N N 131 
DT  "C2'" "H2'"  sing N N 132 
DT  "C2'" "H2''" sing N N 133 
DT  "C1'" N1     sing N N 134 
DT  "C1'" "H1'"  sing N N 135 
DT  N1    C2     sing N N 136 
DT  N1    C6     sing N N 137 
DT  C2    O2     doub N N 138 
DT  C2    N3     sing N N 139 
DT  N3    C4     sing N N 140 
DT  N3    H3     sing N N 141 
DT  C4    O4     doub N N 142 
DT  C4    C5     sing N N 143 
DT  C5    C7     sing N N 144 
DT  C5    C6     doub N N 145 
DT  C7    H71    sing N N 146 
DT  C7    H72    sing N N 147 
DT  C7    H73    sing N N 148 
DT  C6    H6     sing N N 149 
HOH O     H1     sing N N 150 
HOH O     H2     sing N N 151 
RCZ CL    C18    sing N N 152 
RCZ C18   C17    doub Y N 153 
RCZ C18   C14    sing Y N 154 
RCZ C17   C16    sing Y N 155 
RCZ C14   C13    doub Y N 156 
RCZ C13   N4     sing Y N 157 
RCZ C13   C15    sing Y N 158 
RCZ C16   C15    doub Y N 159 
RCZ N6    C21    doub Y N 160 
RCZ N6    C22    sing Y N 161 
RCZ N4    C7     doub Y N 162 
RCZ C15   N3     sing Y N 163 
RCZ C21   C20    sing Y N 164 
RCZ C23   C22    doub Y N 165 
RCZ C23   C24    sing Y N 166 
RCZ C22   C19    sing Y N 167 
RCZ C7    C8     sing Y N 168 
RCZ C7    C6     sing Y N 169 
RCZ C9    C8     doub Y N 170 
RCZ C9    C11    sing Y N 171 
RCZ N3    C6     doub Y N 172 
RCZ C20   N5     doub Y N 173 
RCZ C8    C10    sing Y N 174 
RCZ C11   C12    doub Y N 175 
RCZ C6    C5     sing Y N 176 
RCZ C24   C25    doub Y N 177 
RCZ C19   N5     sing Y N 178 
RCZ C19   C26    doub Y N 179 
RCZ N5    RU     sing N N 180 
RCZ C12   N1     sing Y N 181 
RCZ C10   N1     doub Y N 182 
RCZ C10   C1     sing Y N 183 
RCZ C5    C1     doub Y N 184 
RCZ C5    C4     sing Y N 185 
RCZ N1    RU     sing N N 186 
RCZ C1    N2     sing Y N 187 
RCZ C25   C26    sing Y N 188 
RCZ C25   N7     sing Y N 189 
RCZ C4    C3     doub Y N 190 
RCZ C26   N8     sing Y N 191 
RCZ N7    C27    doub Y N 192 
RCZ N2    RU     sing N N 193 
RCZ N2    C2     doub Y N 194 
RCZ C3    C2     sing Y N 195 
RCZ RU    N8     sing N N 196 
RCZ RU    N12    sing N N 197 
RCZ RU    N9     sing N N 198 
RCZ N8    C28    doub Y N 199 
RCZ C27   C28    sing Y N 200 
RCZ C38   N12    doub Y N 201 
RCZ C38   C37    sing Y N 202 
RCZ N12   C36    sing Y N 203 
RCZ N9    C30    doub Y N 204 
RCZ N9    C29    sing Y N 205 
RCZ C30   C31    sing Y N 206 
RCZ C37   N11    doub Y N 207 
RCZ C36   C29    doub Y N 208 
RCZ C36   C35    sing Y N 209 
RCZ C29   C32    sing Y N 210 
RCZ C31   N10    doub Y N 211 
RCZ N11   C35    sing Y N 212 
RCZ C35   C34    doub Y N 213 
RCZ C32   N10    sing Y N 214 
RCZ C32   C33    doub Y N 215 
RCZ C34   C33    sing Y N 216 
RCZ C4    H4     sing N N 217 
RCZ C2    H2     sing N N 218 
RCZ C14   H14    sing N N 219 
RCZ C16   H16    sing N N 220 
RCZ C17   H17    sing N N 221 
RCZ C9    H9     sing N N 222 
RCZ C11   H11    sing N N 223 
RCZ C12   H12    sing N N 224 
RCZ C3    H3     sing N N 225 
RCZ C20   H20    sing N N 226 
RCZ C21   H21    sing N N 227 
RCZ C23   H23    sing N N 228 
RCZ C24   H24    sing N N 229 
RCZ C27   H27    sing N N 230 
RCZ C28   H28    sing N N 231 
RCZ C30   H30    sing N N 232 
RCZ C31   H31    sing N N 233 
RCZ C33   H33    sing N N 234 
RCZ C34   H34    sing N N 235 
RCZ C37   H37    sing N N 236 
RCZ C38   H38    sing N N 237 
# 
_ndb_struct_conf_na.entry_id   4III 
_ndb_struct_conf_na.feature    'b-form double helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DC 2 1_555 A DG 9 7_555 0.138  -0.112 0.272  -10.920 7.345  1.386  1 A_DC2:DG9_A A 2 ? A 9 ? 19 1 
1 A DG 3 1_555 A DC 8 7_555 -0.196 -0.036 0.103  23.439  -5.149 -0.631 2 A_DG3:DC8_A A 3 ? A 8 ? 19 1 
1 A DG 4 1_555 A DC 7 7_555 -0.229 -0.142 -0.072 -10.194 0.634  -1.711 3 A_DG4:DC7_A A 4 ? A 7 ? 19 1 
1 A DC 5 1_555 A DG 6 7_555 0.259  -0.081 0.246  -4.096  -5.487 0.312  4 A_DC5:DG6_A A 5 ? A 6 ? 19 1 
1 A DG 6 1_555 A DC 5 7_555 -0.259 -0.081 0.246  4.096   -5.488 0.312  5 A_DG6:DC5_A A 6 ? A 5 ? 19 1 
1 A DC 7 1_555 A DG 4 7_555 0.229  -0.142 -0.072 10.194  0.634  -1.711 6 A_DC7:DG4_A A 7 ? A 4 ? 19 1 
1 A DC 8 1_555 A DG 3 7_555 0.196  -0.036 0.103  -23.439 -5.149 -0.631 7 A_DC8:DG3_A A 8 ? A 3 ? 19 1 
1 A DG 9 1_555 A DC 2 7_555 -0.138 -0.112 0.272  10.920  7.345  1.386  8 A_DG9:DC2_A A 9 ? A 2 ? 19 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DC 2 1_555 A DG 9 7_555 A DG 3 1_555 A DC 8 7_555 -0.531 1.695 2.625 3.135  3.575  19.565 3.473  2.725  2.768 10.324 -9.055 
20.129 1 AA_DC2DG3:DC8DG9_AA A 2 ? A 9 ? A 3 ? A 8 ? 
1 A DG 3 1_555 A DC 8 7_555 A DG 4 1_555 A DC 7 7_555 -0.142 0.865 5.223 -3.103 51.389 14.811 -5.284 -0.219 2.333 74.897 4.522  
53.431 2 AA_DG3DG4:DC7DC8_AA A 3 ? A 8 ? A 4 ? A 7 ? 
1 A DG 4 1_555 A DC 7 7_555 A DC 5 1_555 A DG 6 7_555 -0.853 0.139 3.204 -3.233 -3.593 39.510 0.615  0.884  3.237 -5.291 4.761  
39.793 3 AA_DG4DC5:DG6DC7_AA A 4 ? A 7 ? A 5 ? A 6 ? 
1 A DC 5 1_555 A DG 6 7_555 A DG 6 1_555 A DC 5 7_555 0.000  0.815 3.352 0.000  23.279 26.221 -2.631 0.000  3.067 42.244 0.000  
34.927 4 AA_DC5DG6:DC5DG6_AA A 5 ? A 6 ? A 6 ? A 5 ? 
1 A DG 6 1_555 A DC 5 7_555 A DC 7 1_555 A DG 4 7_555 0.853  0.139 3.204 3.233  -3.593 39.510 0.615  -0.884 3.237 -5.291 -4.761 
39.793 5 AA_DG6DC7:DG4DC5_AA A 6 ? A 5 ? A 7 ? A 4 ? 
1 A DC 7 1_555 A DG 4 7_555 A DC 8 1_555 A DG 3 7_555 0.142  0.865 5.223 3.103  51.389 14.811 -5.284 0.219  2.333 74.897 -4.522 
53.431 6 AA_DC7DC8:DG3DG4_AA A 7 ? A 4 ? A 8 ? A 3 ? 
1 A DC 8 1_555 A DG 3 7_555 A DG 9 1_555 A DC 2 7_555 0.531  1.695 2.625 -3.135 3.575  19.565 3.473  -2.725 2.768 10.324 9.055  
20.129 7 AA_DC8DG9:DC2DG3_AA A 8 ? A 3 ? A 9 ? A 2 ? 
# 
loop_
_pdbx_entity_nonpoly.entity_id 
_pdbx_entity_nonpoly.name 
_pdbx_entity_nonpoly.comp_id 
2 'BARIUM ION'                BA  
3 'Ru(TAP)2(Cl-dppz) complex' RCZ 
4 water                       HOH 
# 
_pdbx_initial_refinement_model.id               1 
_pdbx_initial_refinement_model.entity_id_list   ? 
_pdbx_initial_refinement_model.type             'experimental model' 
_pdbx_initial_refinement_model.source_name      PDB 
_pdbx_initial_refinement_model.accession_code   3QRN 
_pdbx_initial_refinement_model.details          ? 
#