HEADER HYDROLASE 20-DEC-12 4IIK TITLE LEGIONELLA PNEUMOPHILA EFFECTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENOSINE MONOPHOSPHATE-PROTEIN HYDROLASE SIDD; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 37-350; COMPND 5 SYNONYM: DE-AMPYLASE SIDD, DEAMPYLASE SIDD, ADENYLYL-[RAB1] COMPND 6 HYDROLASE; COMPND 7 EC: 3.1.4.-; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEGIONELLA PNEUMOPHILA; SOURCE 3 ORGANISM_TAXID: 272624; SOURCE 4 STRAIN: PHILADELPHIA 1 / ATCC 33152 / DSM 7513; SOURCE 5 GENE: SIDD, LPG2465; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS BETA SANDWICH, DE-AMPYLATION, RAB1, LEGIONELLA CONTAINING VACUOLE KEYWDS 2 SURFACE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR I.TASCON,Y.CHEN,M.R.NEUNUEBEL,A.L.ROJAS,M.P.MACHNER,A.HIERRO REVDAT 3 20-MAR-24 4IIK 1 REMARK SEQADV LINK REVDAT 2 21-MAY-14 4IIK 1 REMARK REVDAT 1 19-JUN-13 4IIK 0 JRNL AUTH Y.CHEN,I.TASCON,M.R.NEUNUEBEL,C.PALLARA,J.BRADY,L.N.KINCH, JRNL AUTH 2 J.FERNANDEZ-RECIO,A.L.ROJAS,M.P.MACHNER,A.HIERRO JRNL TITL STRUCTURAL BASIS FOR RAB1 DE-AMPYLATION BY THE LEGIONELLA JRNL TITL 2 PNEUMOPHILA EFFECTOR SIDD JRNL REF PLOS PATHOG. V. 9 03382 2013 JRNL REFN ISSN 1553-7366 JRNL PMID 23696742 JRNL DOI 10.1371/JOURNAL.PPAT.1003382 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 55.54 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 50299 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.124 REMARK 3 R VALUE (WORKING SET) : 0.121 REMARK 3 FREE R VALUE : 0.168 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2555 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2865 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.32 REMARK 3 BIN R VALUE (WORKING SET) : 0.2260 REMARK 3 BIN FREE R VALUE SET COUNT : 140 REMARK 3 BIN FREE R VALUE : 0.3080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2405 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 269 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.14 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.73000 REMARK 3 B22 (A**2) : -1.51000 REMARK 3 B33 (A**2) : -1.22000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.070 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.066 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.045 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.908 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.981 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.970 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2570 ; 0.025 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3490 ; 2.062 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 338 ; 6.450 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 126 ;34.943 ;25.397 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 472 ;15.538 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;23.744 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 400 ; 0.171 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1938 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 2570 ; 8.216 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 100 ;41.642 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 2694 ;19.872 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES: REFINED INDIVIDUALLY REMARK 4 REMARK 4 4IIK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000076796. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE, XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50486 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 55.540 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.57500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.140 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6M NACL, 0.1M NA ACETATE, PH 4.8, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.12500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.07500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.76000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.07500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.12500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.76000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 85 REMARK 465 LYS A 86 REMARK 465 HIS A 87 REMARK 465 THR A 269 REMARK 465 VAL A 270 REMARK 465 ASP A 271 REMARK 465 GLY A 272 REMARK 465 LYS A 273 REMARK 465 LYS A 274 REMARK 465 ILE A 275 REMARK 465 ASN A 276 REMARK 465 HIS A 351 REMARK 465 HIS A 352 REMARK 465 HIS A 353 REMARK 465 HIS A 354 REMARK 465 HIS A 355 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN A 342 O HOH A 591 1.85 REMARK 500 O HOH A 505 O HOH A 689 2.11 REMARK 500 OD2 ASP A 292 O HOH A 733 2.13 REMARK 500 NH1 ARG A 38 O HOH A 765 2.15 REMARK 500 OE1 GLU A 262 O HOH A 558 2.18 REMARK 500 O HOH A 624 O HOH A 630 2.19 REMARK 500 NE ARG A 281 O HOH A 680 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 76 CG HIS A 76 CD2 0.059 REMARK 500 SER A 236 CB SER A 236 OG -0.112 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 101 CB - CG - OD1 ANGL. DEV. = -6.5 DEGREES REMARK 500 ASP A 101 CB - CG - OD2 ANGL. DEV. = 9.6 DEGREES REMARK 500 ASP A 192 CB - CG - OD1 ANGL. DEV. = 6.4 DEGREES REMARK 500 ASP A 214 CB - CG - OD1 ANGL. DEV. = -5.5 DEGREES REMARK 500 ASP A 221 CB - CG - OD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 SER A 236 CB - CA - C ANGL. DEV. = -12.6 DEGREES REMARK 500 ASP A 337 CB - CG - OD1 ANGL. DEV. = 6.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 46 76.83 -102.19 REMARK 500 SER A 71 -159.17 -161.71 REMARK 500 ASN A 235 -147.27 -101.18 REMARK 500 TYR A 253 145.06 -170.51 REMARK 500 ASP A 291 -168.25 -126.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 110 OD2 REMARK 620 2 GLY A 111 O 84.9 REMARK 620 3 HOH A 517 O 81.8 108.7 REMARK 620 4 HOH A 556 O 172.0 87.8 97.7 REMARK 620 5 HOH A 560 O 90.6 89.6 159.3 92.5 REMARK 620 6 HOH A 684 O 87.5 169.5 77.3 100.1 83.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 110 OD1 REMARK 620 2 HOH A 560 O 96.9 REMARK 620 3 HOH A 684 O 85.5 83.4 REMARK 620 4 HOH A 741 O 166.5 91.0 84.4 REMARK 620 5 HOH A 769 O 69.5 164.2 87.4 100.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 414 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 415 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 416 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 417 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 418 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IIP RELATED DB: PDB DBREF 4IIK A 37 350 UNP Q5ZSQ2 SIDD_LEGPH 37 350 SEQADV 4IIK HIS A 351 UNP Q5ZSQ2 EXPRESSION TAG SEQADV 4IIK HIS A 352 UNP Q5ZSQ2 EXPRESSION TAG SEQADV 4IIK HIS A 353 UNP Q5ZSQ2 EXPRESSION TAG SEQADV 4IIK HIS A 354 UNP Q5ZSQ2 EXPRESSION TAG SEQADV 4IIK HIS A 355 UNP Q5ZSQ2 EXPRESSION TAG SEQRES 1 A 319 MET ARG SER ILE ILE THR GLN ILE CYS ASN GLY VAL LEU SEQRES 2 A 319 HIS GLY GLN SER TYR GLN SER GLY SER ASN ASP LEU ASP SEQRES 3 A 319 LYS GLY ASN SER GLU ILE PHE ALA SER SER LEU PHE VAL SEQRES 4 A 319 HIS LEU ASN GLU GLN GLY LYS GLU ILE ILE LYS HIS LYS SEQRES 5 A 319 ASP SER ASP ASP LYS ILE VAL ILE GLY TYR THR LYS ASP SEQRES 6 A 319 GLY MET ALA PHE GLN ILE VAL VAL ASP GLY PHE TYR GLY SEQRES 7 A 319 CYS GLU ARG GLN ALA VAL PHE SER PHE ILE ASP ASN TYR SEQRES 8 A 319 VAL LEU PRO LEU ILE ASP ASN PHE SER LEU ASP LEU THR SEQRES 9 A 319 ARG TYR PRO ASP SER LYS LYS VAL THR GLU SER LEU ILE SEQRES 10 A 319 HIS THR ILE TYR SER LEU ARG SER LYS HIS ALA PRO LEU SEQRES 11 A 319 ALA GLU PHE THR MET SER LEU CYS VAL THR TYR GLN LYS SEQRES 12 A 319 ASP GLU GLN LEU PHE CYS ALA GLY PHE GLY ILE GLY ASP SEQRES 13 A 319 THR GLY ILE ALA ILE LYS ARG ASN GLU GLY THR ILE GLU SEQRES 14 A 319 GLN LEU VAL CYS HIS THR GLU VAL ASP GLY PHE LYS ASP SEQRES 15 A 319 ALA PHE ASP ASN TYR SER SER ALA ASN ILE ASP LEU VAL SEQRES 16 A 319 ILE GLU ARG ASN SER VAL PHE ASN THR LYS VAL MET PRO SEQRES 17 A 319 GLY ASP GLU LEU VAL GLY TYR THR TYR VAL PRO PRO MET SEQRES 18 A 319 LEU GLU MET THR GLU LYS GLU PHE GLU VAL GLU THR VAL SEQRES 19 A 319 ASP GLY LYS LYS ILE ASN LYS ARG ILE VAL ARG HIS LEU SEQRES 20 A 319 ASN LEU ASP PRO GLY ASN PHE ASP ASP LYS ASP PRO LEU SEQRES 21 A 319 PHE SER GLN LEU LEU GLN VAL VAL LYS SER LYS GLN LYS SEQRES 22 A 319 GLN LEU VAL GLU GLN ALA LYS GLU THR GLY GLN ILE GLN SEQRES 23 A 319 ARG PHE GLY ASP ASP PHE THR VAL GLY ARG LEU VAL ILE SEQRES 24 A 319 PRO ASP GLN LEU LEU ILE ASN GLN LEU ARG ILE HIS ALA SEQRES 25 A 319 LEU SER HIS HIS HIS HIS HIS HET MG A 401 1 HET MG A 402 1 HET CL A 403 1 HET CL A 404 1 HET CL A 405 1 HET CL A 406 1 HET CL A 407 1 HET CL A 408 1 HET CL A 409 1 HET CL A 410 1 HET CL A 411 1 HET CL A 412 1 HET CL A 413 1 HET CL A 414 1 HET CL A 415 1 HET GOL A 416 6 HET GOL A 417 6 HET GOL A 418 6 HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 MG 2(MG 2+) FORMUL 4 CL 13(CL 1-) FORMUL 17 GOL 3(C3 H8 O3) FORMUL 20 HOH *269(H2 O) HELIX 1 1 ASN A 59 LYS A 63 5 5 HELIX 2 2 TYR A 113 CYS A 115 5 3 HELIX 3 3 GLU A 116 VAL A 128 1 13 HELIX 4 4 LEU A 131 TYR A 142 1 12 HELIX 5 5 ASP A 144 ALA A 164 1 21 HELIX 6 6 TYR A 223 ALA A 226 5 4 HELIX 7 7 ASN A 227 ASN A 235 1 9 HELIX 8 8 PRO A 255 MET A 257 5 3 HELIX 9 9 PRO A 287 PHE A 290 5 4 HELIX 10 10 PRO A 295 THR A 318 1 24 HELIX 11 11 ASP A 337 SER A 350 1 14 SHEET 1 A 6 ILE A 40 ASN A 46 0 SHEET 2 A 6 ASP A 92 TYR A 98 -1 O TYR A 98 N ILE A 40 SHEET 3 A 6 ALA A 104 GLY A 111 -1 O VAL A 109 N LYS A 93 SHEET 4 A 6 PHE A 169 LYS A 179 -1 O SER A 172 N VAL A 108 SHEET 5 A 6 GLN A 182 ILE A 190 -1 O PHE A 184 N TYR A 177 SHEET 6 A 6 SER A 236 VAL A 242 -1 O THR A 240 N CYS A 185 SHEET 1 B 6 TYR A 54 GLN A 55 0 SHEET 2 B 6 SER A 66 SER A 72 -1 O ALA A 70 N TYR A 54 SHEET 3 B 6 ASP A 327 VAL A 334 -1 O PHE A 328 N SER A 71 SHEET 4 B 6 GLU A 247 TYR A 251 -1 N LEU A 248 O LEU A 333 SHEET 5 B 6 GLY A 194 LYS A 198 -1 N ALA A 196 O VAL A 249 SHEET 6 B 6 ILE A 204 VAL A 208 -1 O GLU A 205 N ILE A 197 SHEET 1 C 2 VAL A 75 LEU A 77 0 SHEET 2 C 2 GLN A 322 PHE A 324 -1 O PHE A 324 N VAL A 75 SHEET 1 D 3 HIS A 210 VAL A 213 0 SHEET 2 D 3 ARG A 278 LEU A 285 -1 O LEU A 283 N HIS A 210 SHEET 3 D 3 GLU A 259 VAL A 267 -1 N PHE A 265 O VAL A 280 LINK OD2 ASP A 110 MG MG A 401 1555 1555 2.13 LINK OD1 ASP A 110 MG MG A 402 1555 1555 2.63 LINK O GLY A 111 MG MG A 401 1555 1555 2.31 LINK MG MG A 401 O HOH A 517 1555 1555 2.57 LINK MG MG A 401 O HOH A 556 1555 1555 2.31 LINK MG MG A 401 O HOH A 560 1555 1555 2.47 LINK MG MG A 401 O HOH A 684 1555 1555 2.53 LINK MG MG A 402 O HOH A 560 1555 1555 2.52 LINK MG MG A 402 O HOH A 684 1555 1555 2.47 LINK MG MG A 402 O HOH A 741 1555 1555 2.44 LINK MG MG A 402 O HOH A 769 1555 1555 2.51 SITE 1 AC1 7 ASP A 110 GLY A 111 MG A 402 HOH A 517 SITE 2 AC1 7 HOH A 556 HOH A 560 HOH A 684 SITE 1 AC2 7 ASP A 110 ASP A 326 MG A 401 HOH A 560 SITE 2 AC2 7 HOH A 684 HOH A 741 HOH A 769 SITE 1 AC3 1 MET A 37 SITE 1 AC4 5 ALA A 164 PRO A 165 LEU A 166 SER A 298 SITE 2 AC4 5 HOH A 751 SITE 1 AC5 3 ASN A 227 ASP A 229 LEU A 230 SITE 1 AC6 2 ASP A 337 GLN A 338 SITE 1 AC7 2 LYS A 162 LYS A 309 SITE 1 AC8 4 ARG A 141 PRO A 256 GLU A 259 GOL A 416 SITE 1 AC9 5 LYS A 162 LYS A 305 HOH A 583 HOH A 727 SITE 2 AC9 5 HOH A 768 SITE 1 BC1 2 SER A 158 HOH A 563 SITE 1 BC2 3 TYR A 177 ASN A 239 HOH A 630 SITE 1 BC3 1 GLY A 114 SITE 1 BC4 4 ARG A 160 SER A 161 ASN A 222 SER A 225 SITE 1 BC5 1 SER A 53 SITE 1 BC6 6 ASN A 134 ASP A 138 ARG A 141 MET A 257 SITE 2 BC6 6 CL A 408 HOH A 614 SITE 1 BC7 6 ASP A 138 LYS A 147 VAL A 148 SER A 151 SITE 2 BC7 6 GLN A 314 HOH A 676 SITE 1 BC8 7 ASP A 101 SER A 136 LEU A 137 THR A 140 SITE 2 BC8 7 TYR A 177 GLN A 178 HOH A 511 CRYST1 60.250 71.520 88.150 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016598 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013982 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011344 0.00000