HEADER HYDROLASE 21-DEC-12 4IJ5
TITLE CRYSTAL STRUCTURE OF A NOVEL-TYPE PHOSPHOSERINE PHOSPHATASE FROM
TITLE 2 HYDROGENOBACTER THERMOPHILUS TK-6
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: PHOSPHOSERINE PHOSPHATASE 1;
COMPND 3 CHAIN: A, B;
COMPND 4 SYNONYM: PSP 1, PSPASE 1, METAL-INDEPENDENT PHOSPHOSERINE PHOSPHATASE
COMPND 5 1, IPSP1, O-PHOSPHOSERINE PHOSPHOHYDROLASE 1;
COMPND 6 EC: 3.1.3.3;
COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HYDROGENOBACTER THERMOPHILUS;
SOURCE 3 ORGANISM_TAXID: 608538;
SOURCE 4 STRAIN: DSM 6534 / IAM 12695 / TK-6;
SOURCE 5 GENE: PSPA, PGMA, HTH_0103, HYDTH_0104;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS PHOSPHATASE, HYDROLASE
EXPDTA X-RAY DIFFRACTION
AUTHOR Y.CHIBA,S.HORITA,J.OHTSUKA,H.ARAI,K.NAGATA,Y.IGARASHI,M.TANOKURA,
AUTHOR 2 M.ISHII
REVDAT 3 08-NOV-23 4IJ5 1 REMARK
REVDAT 2 10-JUL-13 4IJ5 1 JRNL
REVDAT 1 20-MAR-13 4IJ5 0
JRNL AUTH Y.CHIBA,S.HORITA,J.OHTSUKA,H.ARAI,K.NAGATA,Y.IGARASHI,
JRNL AUTH 2 M.TANOKURA,M.ISHII
JRNL TITL STRUCTURAL UNITS IMPORTANT FOR ACTIVITY OF A NOVEL-TYPE
JRNL TITL 2 PHOSPHOSERINE PHOSPHATASE FROM HYDROGENOBACTER THERMOPHILUS
JRNL TITL 3 TK-6 REVEALED BY CRYSTAL STRUCTURE ANALYSIS
JRNL REF J.BIOL.CHEM. V. 288 11448 2013
JRNL REFN ISSN 0021-9258
JRNL PMID 23479726
JRNL DOI 10.1074/JBC.M112.449561
REMARK 2
REMARK 2 RESOLUTION. 1.50 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.7.0029
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.10
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9
REMARK 3 NUMBER OF REFLECTIONS : 73608
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.184
REMARK 3 R VALUE (WORKING SET) : 0.184
REMARK 3 FREE R VALUE : 0.197
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000
REMARK 3 FREE R VALUE TEST SET COUNT : 3714
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54
REMARK 3 REFLECTION IN BIN (WORKING SET) : 5007
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.75
REMARK 3 BIN R VALUE (WORKING SET) : 0.2280
REMARK 3 BIN FREE R VALUE SET COUNT : 282
REMARK 3 BIN FREE R VALUE : 0.2390
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 3456
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 17
REMARK 3 SOLVENT ATOMS : 242
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.45
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 0.22000
REMARK 3 B22 (A**2) : -0.06000
REMARK 3 B33 (A**2) : -0.17000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.073
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.070
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.046
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.461
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3577 ; 0.008 ; 0.019
REMARK 3 BOND LENGTHS OTHERS (A): 3481 ; 0.001 ; 0.020
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4833 ; 1.272 ; 1.957
REMARK 3 BOND ANGLES OTHERS (DEGREES): 8003 ; 0.772 ; 3.001
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 432 ; 5.932 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 172 ;36.824 ;23.488
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 665 ;11.974 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;15.717 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 528 ; 0.077 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3962 ; 0.005 ; 0.020
REMARK 3 GENERAL PLANES OTHERS (A): 830 ; 0.001 ; 0.020
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 2
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 1 A 211
REMARK 3 ORIGIN FOR THE GROUP (A): -8.2145 -0.6449 3.8643
REMARK 3 T TENSOR
REMARK 3 T11: 0.0062 T22: 0.0250
REMARK 3 T33: 0.0683 T12: -0.0050
REMARK 3 T13: -0.0017 T23: -0.0001
REMARK 3 L TENSOR
REMARK 3 L11: 0.6474 L22: 0.4976
REMARK 3 L33: 2.0332 L12: 0.0970
REMARK 3 L13: 0.2299 L23: -0.1940
REMARK 3 S TENSOR
REMARK 3 S11: -0.0188 S12: 0.0357 S13: 0.0105
REMARK 3 S21: -0.0067 S22: 0.0237 S23: 0.0024
REMARK 3 S31: -0.0414 S32: 0.1609 S33: -0.0049
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : B 1 B 211
REMARK 3 ORIGIN FOR THE GROUP (A): -17.0784 -2.6525 30.2812
REMARK 3 T TENSOR
REMARK 3 T11: 0.0016 T22: 0.0347
REMARK 3 T33: 0.0611 T12: -0.0039
REMARK 3 T13: -0.0056 T23: -0.0004
REMARK 3 L TENSOR
REMARK 3 L11: 0.6330 L22: 0.4254
REMARK 3 L33: 3.0858 L12: 0.0827
REMARK 3 L13: 0.5325 L23: 0.1295
REMARK 3 S TENSOR
REMARK 3 S11: 0.0110 S12: -0.0685 S13: 0.0215
REMARK 3 S21: 0.0168 S22: -0.0061 S23: -0.0167
REMARK 3 S31: 0.0221 S32: -0.2521 S33: -0.0049
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : MASK
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.20
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 4IJ5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-JAN-13.
REMARK 100 THE DEPOSITION ID IS D_1000076817.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 22-JUL-11
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : SPRING-8
REMARK 200 BEAMLINE : BL32XU
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : MAR225HE
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : XDS
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 73612
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500
REMARK 200 RESOLUTION RANGE LOW (A) : 36.100
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : NULL
REMARK 200 DATA REDUNDANCY : 8.600
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 FOR THE DATA SET : NULL
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: NULL
REMARK 200 STARTING MODEL: 1H2E
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 46.91
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM HEPES-NAOH, 10%(V/V) 2-PROPANOL,
REMARK 280 20%(W/V) POLYETHYLENE GLYCOL 4000, PH 7.5, VAPOR DIFFUSION,
REMARK 280 SITTING DROP, TEMPERATURE 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X+1/2,-Y,Z+1/2
REMARK 290 3555 -X,Y+1/2,-Z+1/2
REMARK 290 4555 X+1/2,-Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.90500
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.14000
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.81500
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.14000
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.90500
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.81500
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 3170 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 17400 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 2.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 CG2 THR A 151 O HOH A 477 2.16
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 HIS A 9 150.58 -49.97
REMARK 500 SER A 149 -155.23 -147.78
REMARK 500 CYS A 174 81.90 -157.87
REMARK 500 SER B 149 -157.39 -147.46
REMARK 500 CYS B 174 76.06 -159.08
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS
REMARK 500
REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH
REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED
REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND
REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES.
REMARK 500 MODEL OMEGA
REMARK 500 ALA B 69 LYS B 70 146.74
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 301
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 302
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 303
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 304
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 301
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 4IJ6 RELATED DB: PDB
DBREF 4IJ5 A 1 211 UNP D3DFG8 PSPA_HYDTT 1 211
DBREF 4IJ5 B 1 211 UNP D3DFG8 PSPA_HYDTT 1 211
SEQRES 1 A 211 MET VAL LYS LEU ILE LEU VAL ARG HIS ALA GLU SER GLU
SEQRES 2 A 211 TRP ASN PRO VAL GLY ARG TYR GLN GLY LEU LEU ASP PRO
SEQRES 3 A 211 ASP LEU SER GLU ARG GLY LYS LYS GLN ALA LYS LEU LEU
SEQRES 4 A 211 ALA GLN GLU LEU SER ARG GLU HIS LEU ASP VAL ILE TYR
SEQRES 5 A 211 SER SER PRO LEU LYS ARG THR TYR LEU THR ALA LEU GLU
SEQRES 6 A 211 ILE ALA GLU ALA LYS ASN LEU GLU VAL ILE LYS GLU ASP
SEQRES 7 A 211 ARG ILE ILE GLU ILE ASP HIS GLY MET TRP SER GLY MET
SEQRES 8 A 211 LEU VAL GLU GLU VAL MET GLU LYS TYR PRO GLU ASP PHE
SEQRES 9 A 211 ARG ARG TRP VAL GLU GLU PRO HIS LYS VAL GLU PHE GLN
SEQRES 10 A 211 GLY GLY GLU SER LEU ALA SER VAL TYR ASN ARG VAL LYS
SEQRES 11 A 211 GLY PHE LEU GLU GLU VAL ARG LYS ARG HIS TRP ASN GLN
SEQRES 12 A 211 THR VAL VAL VAL VAL SER HIS THR VAL PRO MET ARG ALA
SEQRES 13 A 211 MET TYR CYS ALA LEU LEU GLY VAL ASP LEU SER LYS PHE
SEQRES 14 A 211 TRP SER PHE GLY CYS ASP ASN ALA SER TYR SER VAL ILE
SEQRES 15 A 211 HIS MET GLU GLU ARG ARG ASN VAL ILE LEU LYS LEU ASN
SEQRES 16 A 211 ILE THR CYS HIS LEU GLY GLU PHE TYR VAL GLU ALA HIS
SEQRES 17 A 211 LYS ALA ILE
SEQRES 1 B 211 MET VAL LYS LEU ILE LEU VAL ARG HIS ALA GLU SER GLU
SEQRES 2 B 211 TRP ASN PRO VAL GLY ARG TYR GLN GLY LEU LEU ASP PRO
SEQRES 3 B 211 ASP LEU SER GLU ARG GLY LYS LYS GLN ALA LYS LEU LEU
SEQRES 4 B 211 ALA GLN GLU LEU SER ARG GLU HIS LEU ASP VAL ILE TYR
SEQRES 5 B 211 SER SER PRO LEU LYS ARG THR TYR LEU THR ALA LEU GLU
SEQRES 6 B 211 ILE ALA GLU ALA LYS ASN LEU GLU VAL ILE LYS GLU ASP
SEQRES 7 B 211 ARG ILE ILE GLU ILE ASP HIS GLY MET TRP SER GLY MET
SEQRES 8 B 211 LEU VAL GLU GLU VAL MET GLU LYS TYR PRO GLU ASP PHE
SEQRES 9 B 211 ARG ARG TRP VAL GLU GLU PRO HIS LYS VAL GLU PHE GLN
SEQRES 10 B 211 GLY GLY GLU SER LEU ALA SER VAL TYR ASN ARG VAL LYS
SEQRES 11 B 211 GLY PHE LEU GLU GLU VAL ARG LYS ARG HIS TRP ASN GLN
SEQRES 12 B 211 THR VAL VAL VAL VAL SER HIS THR VAL PRO MET ARG ALA
SEQRES 13 B 211 MET TYR CYS ALA LEU LEU GLY VAL ASP LEU SER LYS PHE
SEQRES 14 B 211 TRP SER PHE GLY CYS ASP ASN ALA SER TYR SER VAL ILE
SEQRES 15 B 211 HIS MET GLU GLU ARG ARG ASN VAL ILE LEU LYS LEU ASN
SEQRES 16 B 211 ILE THR CYS HIS LEU GLY GLU PHE TYR VAL GLU ALA HIS
SEQRES 17 B 211 LYS ALA ILE
HET CL A 301 1
HET EDO A 302 4
HET EDO A 303 4
HET EDO A 304 4
HET EDO B 301 4
HETNAM CL CHLORIDE ION
HETNAM EDO 1,2-ETHANEDIOL
HETSYN EDO ETHYLENE GLYCOL
FORMUL 3 CL CL 1-
FORMUL 4 EDO 4(C2 H6 O2)
FORMUL 8 HOH *242(H2 O)
HELIX 1 1 SER A 29 SER A 44 1 16
HELIX 2 2 LEU A 56 ALA A 69 1 14
HELIX 3 3 ASP A 78 ILE A 81 5 4
HELIX 4 4 HIS A 85 SER A 89 5 5
HELIX 5 5 LEU A 92 TYR A 100 1 9
HELIX 6 6 TYR A 100 GLU A 110 1 11
HELIX 7 7 PRO A 111 VAL A 114 5 4
HELIX 8 8 SER A 121 HIS A 140 1 20
HELIX 9 9 HIS A 150 GLY A 163 1 14
HELIX 10 10 ASP A 165 PHE A 172 5 8
HELIX 11 11 THR A 197 TYR A 204 5 8
HELIX 12 12 SER B 29 SER B 44 1 16
HELIX 13 13 LEU B 56 GLU B 68 1 13
HELIX 14 14 ASP B 78 ILE B 81 5 4
HELIX 15 15 HIS B 85 SER B 89 5 5
HELIX 16 16 LEU B 92 TYR B 100 1 9
HELIX 17 17 TYR B 100 GLU B 110 1 11
HELIX 18 18 PRO B 111 VAL B 114 5 4
HELIX 19 19 SER B 121 HIS B 140 1 20
HELIX 20 20 HIS B 150 GLY B 163 1 14
HELIX 21 21 ASP B 165 PHE B 172 5 8
HELIX 22 22 THR B 197 TYR B 204 5 8
SHEET 1 A 6 VAL A 74 LYS A 76 0
SHEET 2 A 6 VAL A 50 SER A 53 1 N ILE A 51 O ILE A 75
SHEET 3 A 6 THR A 144 SER A 149 1 O VAL A 146 N TYR A 52
SHEET 4 A 6 VAL A 2 ARG A 8 1 N ILE A 5 O VAL A 145
SHEET 5 A 6 TYR A 179 MET A 184 -1 O ILE A 182 N LEU A 4
SHEET 6 A 6 ASN A 189 ILE A 196 -1 O ILE A 196 N TYR A 179
SHEET 1 B 6 VAL B 74 LYS B 76 0
SHEET 2 B 6 VAL B 50 SER B 53 1 N ILE B 51 O ILE B 75
SHEET 3 B 6 THR B 144 SER B 149 1 O VAL B 146 N TYR B 52
SHEET 4 B 6 VAL B 2 ARG B 8 1 N VAL B 7 O VAL B 147
SHEET 5 B 6 TYR B 179 MET B 184 -1 O ILE B 182 N LEU B 4
SHEET 6 B 6 ASN B 189 ILE B 196 -1 O ILE B 196 N TYR B 179
SSBOND 1 CYS A 198 CYS B 198 1555 1555 2.02
SITE 1 AC1 5 ARG A 8 ASN A 15 GLN A 21 HOH A 402
SITE 2 AC1 5 HOH A 413
SITE 1 AC2 5 LYS A 130 MET A 184 ASN A 189 HOH A 434
SITE 2 AC2 5 HOH A 522
SITE 1 AC3 6 TRP A 14 VAL A 17 ARG A 19 SER B 89
SITE 2 AC3 6 MET B 91 HOH B 480
SITE 1 AC4 5 TRP A 170 ALA A 210 HOH A 495 ARG B 188
SITE 2 AC4 5 HOH B 433
SITE 1 AC5 3 MET B 184 ASN B 189 HOH B 501
CRYST1 49.810 73.630 124.280 90.00 90.00 90.00 P 21 21 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.020076 0.000000 0.000000 0.00000
SCALE2 0.000000 0.013581 0.000000 0.00000
SCALE3 0.000000 0.000000 0.008046 0.00000