HEADER DNA BINDING PROTEIN 23-DEC-12 4IJT TITLE HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R273H (FORM II) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELLULAR TUMOR ANTIGEN P53; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: DNA BINDING DOMAIN; COMPND 5 SYNONYM: ANTIGEN NY-CO-13, PHOSPHOPROTEIN P53, TUMOR SUPPRESSOR P53; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: P53, TP53; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-27-B KEYWDS METAL-BINDING, LOOP-SHEET-HELIX MOTIF, TRANSCRIPTION, ACTIVATOR, KEYWDS 2 ANTI-ONCOGENE, APOPTOSIS, CELL CYCLE, DISEASE MUTATION, RESCUE KEYWDS 3 MUTATION, TUMOR SUPPRESSOR, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.ROZENBERG,A.ELDAR,Y.DISKIN-POSNER,Z.SHAKKED REVDAT 5 20-SEP-23 4IJT 1 REMARK SEQADV LINK REVDAT 4 15-NOV-17 4IJT 1 REMARK REVDAT 3 20-MAY-15 4IJT 1 TITLE REMARK REVDAT 2 23-OCT-13 4IJT 1 JRNL REVDAT 1 14-AUG-13 4IJT 0 JRNL AUTH A.ELDAR,H.ROZENBERG,Y.DISKIN-POSNER,R.ROHS,Z.SHAKKED JRNL TITL STRUCTURAL STUDIES OF P53 INACTIVATION BY DNA-CONTACT JRNL TITL 2 MUTATIONS AND ITS RESCUE BY SUPPRESSOR MUTATIONS VIA JRNL TITL 3 ALTERNATIVE PROTEIN-DNA INTERACTIONS. JRNL REF NUCLEIC ACIDS RES. V. 41 8748 2013 JRNL REFN ISSN 0305-1048 JRNL PMID 23863845 JRNL DOI 10.1093/NAR/GKT630 REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1223 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.53 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 22322 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 1107 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.5312 - 3.5600 0.99 2669 141 0.1388 0.1480 REMARK 3 2 3.5600 - 2.8270 1.00 2661 143 0.1525 0.1855 REMARK 3 3 2.8270 - 2.4700 1.00 2670 138 0.1776 0.2148 REMARK 3 4 2.4700 - 2.2444 1.00 2652 139 0.1681 0.2028 REMARK 3 5 2.2444 - 2.0836 1.00 2631 138 0.1619 0.2026 REMARK 3 6 2.0836 - 1.9608 1.00 2666 139 0.1685 0.2183 REMARK 3 7 1.9608 - 1.8626 1.00 2651 136 0.1831 0.2259 REMARK 3 8 1.8626 - 1.7800 0.99 2615 133 0.1999 0.2720 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 1740 REMARK 3 ANGLE : 1.330 2375 REMARK 3 CHIRALITY : 0.094 256 REMARK 3 PLANARITY : 0.006 322 REMARK 3 DIHEDRAL : 12.843 670 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 94:123 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.6294 -13.9307 -3.6002 REMARK 3 T TENSOR REMARK 3 T11: 0.1420 T22: 0.1207 REMARK 3 T33: 0.0885 T12: 0.0309 REMARK 3 T13: 0.0189 T23: 0.0069 REMARK 3 L TENSOR REMARK 3 L11: 0.8607 L22: 0.8489 REMARK 3 L33: 0.5298 L12: -0.7003 REMARK 3 L13: 0.3834 L23: 0.0066 REMARK 3 S TENSOR REMARK 3 S11: 0.2394 S12: 0.2538 S13: -0.0704 REMARK 3 S21: -0.2212 S22: -0.1479 S23: 0.0841 REMARK 3 S31: 0.0395 S32: -0.0071 S33: 1.0161 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 124:155 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.8852 -14.6966 1.2298 REMARK 3 T TENSOR REMARK 3 T11: 0.1111 T22: 0.0747 REMARK 3 T33: 0.0758 T12: 0.0059 REMARK 3 T13: -0.0016 T23: -0.0140 REMARK 3 L TENSOR REMARK 3 L11: 0.2929 L22: 0.3615 REMARK 3 L33: 0.4384 L12: -0.1061 REMARK 3 L13: 0.2813 L23: -0.3351 REMARK 3 S TENSOR REMARK 3 S11: 0.0764 S12: -0.0388 S13: -0.1127 REMARK 3 S21: 0.0052 S22: -0.0463 S23: 0.0210 REMARK 3 S31: 0.0998 S32: 0.0028 S33: 0.0082 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 156:194 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.1911 2.8347 1.2720 REMARK 3 T TENSOR REMARK 3 T11: 0.1212 T22: 0.0795 REMARK 3 T33: 0.1547 T12: -0.0252 REMARK 3 T13: -0.0041 T23: -0.0064 REMARK 3 L TENSOR REMARK 3 L11: 0.9917 L22: 0.7773 REMARK 3 L33: 0.3260 L12: -0.6609 REMARK 3 L13: -0.4817 L23: 0.2161 REMARK 3 S TENSOR REMARK 3 S11: -0.0094 S12: -0.0416 S13: 0.3242 REMARK 3 S21: -0.0321 S22: 0.0179 S23: -0.1552 REMARK 3 S31: -0.1317 S32: 0.0586 S33: -0.1074 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESID 195:213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.7872 -2.6409 2.3011 REMARK 3 T TENSOR REMARK 3 T11: 0.1106 T22: 0.1278 REMARK 3 T33: 0.1479 T12: -0.0340 REMARK 3 T13: 0.0053 T23: 0.0537 REMARK 3 L TENSOR REMARK 3 L11: 1.0657 L22: 0.9837 REMARK 3 L33: 1.0369 L12: -0.8436 REMARK 3 L13: -0.3020 L23: -0.0690 REMARK 3 S TENSOR REMARK 3 S11: -0.0051 S12: -0.0402 S13: 0.3538 REMARK 3 S21: 0.0301 S22: -0.1329 S23: -0.3933 REMARK 3 S31: -0.0764 S32: 0.3532 S33: 0.0110 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESID 214:277 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.2863 -8.6684 -0.2424 REMARK 3 T TENSOR REMARK 3 T11: 0.0884 T22: 0.0528 REMARK 3 T33: 0.0447 T12: 0.0033 REMARK 3 T13: 0.0165 T23: -0.0012 REMARK 3 L TENSOR REMARK 3 L11: 1.0452 L22: 0.8466 REMARK 3 L33: 1.2903 L12: 0.1117 REMARK 3 L13: -0.0379 L23: -0.1776 REMARK 3 S TENSOR REMARK 3 S11: 0.0672 S12: 0.0348 S13: 0.0528 REMARK 3 S21: 0.0219 S22: -0.1316 S23: -0.0470 REMARK 3 S31: 0.0098 S32: 0.0606 S33: -0.2870 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND (RESID 278:291) REMARK 3 ORIGIN FOR THE GROUP (A): 14.0814 -8.4141 -2.0032 REMARK 3 T TENSOR REMARK 3 T11: 0.1411 T22: 0.2338 REMARK 3 T33: 0.2269 T12: 0.0990 REMARK 3 T13: -0.0173 T23: -0.0330 REMARK 3 L TENSOR REMARK 3 L11: 0.3285 L22: 2.4604 REMARK 3 L33: 0.9094 L12: -0.4706 REMARK 3 L13: 0.0250 L23: 0.5926 REMARK 3 S TENSOR REMARK 3 S11: 0.0541 S12: -0.0200 S13: -0.1353 REMARK 3 S21: -0.3923 S22: -0.3193 S23: 0.5716 REMARK 3 S31: -0.2304 S32: -0.5667 S33: -0.6170 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4IJT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000076841. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-APR-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9310 REMARK 200 MONOCHROMATOR : DIAMOND (111), GE(220) REMARK 200 OPTICS : TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22336 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 27.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.14100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.52900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1TSR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1:1.5 PROTEIN/DNA RATIO, 20% PEG 3350, REMARK 280 0.2M KCL, PH 6.1, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 24.43600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 48.87200 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 36.65400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 61.09000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 12.21800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 292 REMARK 465 GLY A 293 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 94 CB OG REMARK 470 ARG A 202 CZ NH1 NH2 REMARK 470 ARG A 209 CD NE CZ NH1 NH2 REMARK 470 ASN A 210 OD1 ND2 REMARK 470 ARG A 280 CD NE CZ NH1 NH2 REMARK 470 ARG A 290 NE CZ NH1 NH2 REMARK 470 LYS A 291 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 240 O HOH A 451 2.18 REMARK 500 O2 EDO A 305 O HOH A 478 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 176 SG REMARK 620 2 HIS A 179 ND1 105.5 REMARK 620 3 CYS A 238 SG 107.9 122.6 REMARK 620 4 CYS A 242 SG 114.9 99.5 106.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 182 SG REMARK 620 2 DTT A 303 S4 118.4 REMARK 620 3 DTT A 303 S1 118.1 108.5 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DTT A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 306 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IBQ RELATED DB: PDB REMARK 900 RELATED ID: 4IBS RELATED DB: PDB REMARK 900 RELATED ID: 4IBT RELATED DB: PDB REMARK 900 RELATED ID: 4IBU RELATED DB: PDB REMARK 900 RELATED ID: 4IBV RELATED DB: PDB REMARK 900 RELATED ID: 4IBW RELATED DB: PDB REMARK 900 RELATED ID: 4IBY RELATED DB: PDB REMARK 900 RELATED ID: 4IBZ RELATED DB: PDB DBREF 4IJT A 94 293 UNP P04637 P53_HUMAN 94 293 SEQADV 4IJT HIS A 273 UNP P04637 ARG 273 ENGINEERED MUTATION SEQRES 1 A 200 SER SER SER VAL PRO SER GLN LYS THR TYR GLN GLY SER SEQRES 2 A 200 TYR GLY PHE ARG LEU GLY PHE LEU HIS SER GLY THR ALA SEQRES 3 A 200 LYS SER VAL THR CYS THR TYR SER PRO ALA LEU ASN LYS SEQRES 4 A 200 MET PHE CYS GLN LEU ALA LYS THR CYS PRO VAL GLN LEU SEQRES 5 A 200 TRP VAL ASP SER THR PRO PRO PRO GLY THR ARG VAL ARG SEQRES 6 A 200 ALA MET ALA ILE TYR LYS GLN SER GLN HIS MET THR GLU SEQRES 7 A 200 VAL VAL ARG ARG CYS PRO HIS HIS GLU ARG CYS SER ASP SEQRES 8 A 200 SER ASP GLY LEU ALA PRO PRO GLN HIS LEU ILE ARG VAL SEQRES 9 A 200 GLU GLY ASN LEU ARG VAL GLU TYR LEU ASP ASP ARG ASN SEQRES 10 A 200 THR PHE ARG HIS SER VAL VAL VAL PRO TYR GLU PRO PRO SEQRES 11 A 200 GLU VAL GLY SER ASP CYS THR THR ILE HIS TYR ASN TYR SEQRES 12 A 200 MET CYS ASN SER SER CYS MET GLY GLY MET ASN ARG ARG SEQRES 13 A 200 PRO ILE LEU THR ILE ILE THR LEU GLU ASP SER SER GLY SEQRES 14 A 200 ASN LEU LEU GLY ARG ASN SER PHE GLU VAL HIS VAL CYS SEQRES 15 A 200 ALA CYS PRO GLY ARG ASP ARG ARG THR GLU GLU GLU ASN SEQRES 16 A 200 LEU ARG LYS LYS GLY HET ZN A 301 1 HET ZN A 302 1 HET DTT A 303 8 HET EDO A 304 4 HET EDO A 305 8 HET EDO A 306 4 HETNAM ZN ZINC ION HETNAM DTT 2,3-DIHYDROXY-1,4-DITHIOBUTANE HETNAM EDO 1,2-ETHANEDIOL HETSYN DTT 1,4-DITHIOTHREITOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 ZN 2(ZN 2+) FORMUL 4 DTT C4 H10 O2 S2 FORMUL 5 EDO 3(C2 H6 O2) FORMUL 8 HOH *259(H2 O) HELIX 1 1 GLN A 165 MET A 169 5 5 HELIX 2 2 HIS A 178 CYS A 182 5 5 HELIX 3 3 CYS A 277 LYS A 291 1 15 SHEET 1 A 4 ARG A 110 GLY A 112 0 SHEET 2 A 4 CYS A 141 TRP A 146 -1 O GLN A 144 N GLY A 112 SHEET 3 A 4 THR A 230 TYR A 236 -1 O THR A 230 N LEU A 145 SHEET 4 A 4 ILE A 195 VAL A 197 -1 N ARG A 196 O ASN A 235 SHEET 1 B 7 CYS A 124 SER A 127 0 SHEET 2 B 7 LYS A 132 CYS A 135 -1 O PHE A 134 N THR A 125 SHEET 3 B 7 LEU A 264 VAL A 274 1 O GLU A 271 N MET A 133 SHEET 4 B 7 ILE A 251 GLU A 258 -1 N LEU A 257 O LEU A 265 SHEET 5 B 7 ARG A 156 TYR A 163 -1 N MET A 160 O ILE A 254 SHEET 6 B 7 HIS A 214 PRO A 219 -1 O VAL A 218 N VAL A 157 SHEET 7 B 7 GLU A 204 ASP A 207 -1 N GLU A 204 O VAL A 217 LINK SG CYS A 176 ZN ZN A 301 1555 1555 2.30 LINK ND1 HIS A 179 ZN ZN A 301 1555 1555 1.99 LINK SG CYS A 182 ZN ZN A 302 1555 1555 2.11 LINK SG CYS A 238 ZN ZN A 301 1555 1555 2.32 LINK SG CYS A 242 ZN ZN A 301 1555 1555 2.35 LINK ZN ZN A 302 S4 DTT A 303 1555 1555 2.40 LINK ZN ZN A 302 S1 DTT A 303 1555 1555 2.48 SITE 1 AC1 4 CYS A 176 HIS A 179 CYS A 238 CYS A 242 SITE 1 AC2 3 HIS A 115 CYS A 182 DTT A 303 SITE 1 AC3 4 SER A 183 ZN A 302 HOH A 495 HOH A 622 SITE 1 AC4 7 LEU A 114 LEU A 264 ARG A 267 HOH A 426 SITE 2 AC4 7 HOH A 533 HOH A 558 HOH A 604 SITE 1 AC5 13 TYR A 103 GLN A 104 GLY A 105 GLY A 108 SITE 2 AC5 13 THR A 231 HIS A 233 HOH A 410 HOH A 411 SITE 3 AC5 13 HOH A 424 HOH A 478 HOH A 496 HOH A 517 SITE 4 AC5 13 HOH A 607 SITE 1 AC6 8 LEU A 114 SER A 116 CYS A 124 PRO A 142 SITE 2 AC6 8 HOH A 414 HOH A 530 HOH A 536 HOH A 542 CRYST1 74.937 74.937 73.308 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013345 0.007704 0.000000 0.00000 SCALE2 0.000000 0.015409 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013641 0.00000