data_4IJX # _entry.id 4IJX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4IJX pdb_00004ijx 10.2210/pdb4ijx/pdb RCSB RCSB076845 ? ? WWPDB D_1000076845 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3U53 'The wild-type protein' unspecified PDB 4ICK 'The same protein in free form' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4IJX _pdbx_database_status.recvd_initial_deposition_date 2012-12-24 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ge, H.' 1 'Chen, X.' 2 # _citation.id primary _citation.title 'Crystal structure of wild-type and mutant human Ap4A hydrolase.' _citation.journal_abbrev Biochem.Biophys.Res.Commun. _citation.journal_volume 432 _citation.page_first 16 _citation.page_last 21 _citation.year 2013 _citation.journal_id_ASTM BBRCA9 _citation.country US _citation.journal_id_ISSN 0006-291X _citation.journal_id_CSD 0146 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23384440 _citation.pdbx_database_id_DOI 10.1016/j.bbrc.2013.01.095 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ge, H.' 1 ? primary 'Chen, X.' 2 ? primary 'Yang, W.' 3 ? primary 'Niu, L.' 4 ? primary 'Teng, M.' 5 ? # _cell.entry_id 4IJX _cell.length_a 72.369 _cell.length_b 72.369 _cell.length_c 133.379 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4IJX _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] ; 17864.350 2 3.6.1.17 E58A ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn DIPHOSPHATE 173.943 1 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 5 non-polymer syn 'PHOSPHATE ION' 94.971 2 ? ? ? ? 6 water nat water 18.015 121 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Diadenosine 5',5'''-P1,P4-tetraphosphate asymmetrical hydrolase, Ap4A hydrolase, Ap4Aase, Diadenosine tetraphosphatase, Nucleoside diphosphate-linked moiety X motif 2, Nudix motif 2 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRATQEEAGIEAGQLTIIEGFKREL NYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQFKEMKAALQEGHQFLCSIEALEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRATQEEAGIEAGQLTIIEGFKREL NYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQFKEMKAALQEGHQFLCSIEALEHHHHHH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 LEU n 1 4 ARG n 1 5 ALA n 1 6 CYS n 1 7 GLY n 1 8 LEU n 1 9 ILE n 1 10 ILE n 1 11 PHE n 1 12 ARG n 1 13 ARG n 1 14 CYS n 1 15 LEU n 1 16 ILE n 1 17 PRO n 1 18 LYS n 1 19 VAL n 1 20 ASP n 1 21 ASN n 1 22 ASN n 1 23 ALA n 1 24 ILE n 1 25 GLU n 1 26 PHE n 1 27 LEU n 1 28 LEU n 1 29 LEU n 1 30 GLN n 1 31 ALA n 1 32 SER n 1 33 ASP n 1 34 GLY n 1 35 ILE n 1 36 HIS n 1 37 HIS n 1 38 TRP n 1 39 THR n 1 40 PRO n 1 41 PRO n 1 42 LYS n 1 43 GLY n 1 44 HIS n 1 45 VAL n 1 46 GLU n 1 47 PRO n 1 48 GLY n 1 49 GLU n 1 50 ASP n 1 51 ASP n 1 52 LEU n 1 53 GLU n 1 54 THR n 1 55 ALA n 1 56 LEU n 1 57 ARG n 1 58 ALA n 1 59 THR n 1 60 GLN n 1 61 GLU n 1 62 GLU n 1 63 ALA n 1 64 GLY n 1 65 ILE n 1 66 GLU n 1 67 ALA n 1 68 GLY n 1 69 GLN n 1 70 LEU n 1 71 THR n 1 72 ILE n 1 73 ILE n 1 74 GLU n 1 75 GLY n 1 76 PHE n 1 77 LYS n 1 78 ARG n 1 79 GLU n 1 80 LEU n 1 81 ASN n 1 82 TYR n 1 83 VAL n 1 84 ALA n 1 85 ARG n 1 86 ASN n 1 87 LYS n 1 88 PRO n 1 89 LYS n 1 90 THR n 1 91 VAL n 1 92 ILE n 1 93 TYR n 1 94 TRP n 1 95 LEU n 1 96 ALA n 1 97 GLU n 1 98 VAL n 1 99 LYS n 1 100 ASP n 1 101 TYR n 1 102 ASP n 1 103 VAL n 1 104 GLU n 1 105 ILE n 1 106 ARG n 1 107 LEU n 1 108 SER n 1 109 HIS n 1 110 GLU n 1 111 HIS n 1 112 GLN n 1 113 ALA n 1 114 TYR n 1 115 ARG n 1 116 TRP n 1 117 LEU n 1 118 GLY n 1 119 LEU n 1 120 GLU n 1 121 GLU n 1 122 ALA n 1 123 CYS n 1 124 GLN n 1 125 LEU n 1 126 ALA n 1 127 GLN n 1 128 PHE n 1 129 LYS n 1 130 GLU n 1 131 MET n 1 132 LYS n 1 133 ALA n 1 134 ALA n 1 135 LEU n 1 136 GLN n 1 137 GLU n 1 138 GLY n 1 139 HIS n 1 140 GLN n 1 141 PHE n 1 142 LEU n 1 143 CYS n 1 144 SER n 1 145 ILE n 1 146 GLU n 1 147 ALA n 1 148 LEU n 1 149 GLU n 1 150 HIS n 1 151 HIS n 1 152 HIS n 1 153 HIS n 1 154 HIS n 1 155 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NUDT2, APAH1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET22b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code AP4A_HUMAN _struct_ref.pdbx_db_accession P50583 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKREL NYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQFKEMKAALQEGHQFLCSIEA ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4IJX A 1 ? 147 ? P50583 1 ? 147 ? 1 147 2 1 4IJX B 1 ? 147 ? P50583 1 ? 147 ? 1 147 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4IJX ALA A 58 ? UNP P50583 GLU 58 'engineered mutation' 58 1 1 4IJX LEU A 148 ? UNP P50583 ? ? 'expression tag' 148 2 1 4IJX GLU A 149 ? UNP P50583 ? ? 'expression tag' 149 3 1 4IJX HIS A 150 ? UNP P50583 ? ? 'expression tag' 150 4 1 4IJX HIS A 151 ? UNP P50583 ? ? 'expression tag' 151 5 1 4IJX HIS A 152 ? UNP P50583 ? ? 'expression tag' 152 6 1 4IJX HIS A 153 ? UNP P50583 ? ? 'expression tag' 153 7 1 4IJX HIS A 154 ? UNP P50583 ? ? 'expression tag' 154 8 1 4IJX HIS A 155 ? UNP P50583 ? ? 'expression tag' 155 9 2 4IJX ALA B 58 ? UNP P50583 GLU 58 'engineered mutation' 58 10 2 4IJX LEU B 148 ? UNP P50583 ? ? 'expression tag' 148 11 2 4IJX GLU B 149 ? UNP P50583 ? ? 'expression tag' 149 12 2 4IJX HIS B 150 ? UNP P50583 ? ? 'expression tag' 150 13 2 4IJX HIS B 151 ? UNP P50583 ? ? 'expression tag' 151 14 2 4IJX HIS B 152 ? UNP P50583 ? ? 'expression tag' 152 15 2 4IJX HIS B 153 ? UNP P50583 ? ? 'expression tag' 153 16 2 4IJX HIS B 154 ? UNP P50583 ? ? 'expression tag' 154 17 2 4IJX HIS B 155 ? UNP P50583 ? ? 'expression tag' 155 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DPO non-polymer . DIPHOSPHATE ? 'O7 P2 -4' 173.943 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4IJX _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.44 _exptl_crystal.density_percent_sol 49.67 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 285 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.4 _exptl_crystal_grow.pdbx_details '0.1M Tris, 2.0M Ammonium phosphate monobasic, 5mM magnesium chloride, pH 8.4, VAPOR DIFFUSION, HANGING DROP, temperature 285K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector ? _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2012-06-21 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97915 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRF BEAMLINE BL17U' _diffrn_source.pdbx_synchrotron_site SSRF _diffrn_source.pdbx_synchrotron_beamline BL17U _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97915 # _reflns.entry_id 4IJX _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30 _reflns.d_resolution_high 2.1 _reflns.number_obs 20214 _reflns.number_all 21348 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.103 _reflns_shell.d_res_low 2.157 _reflns_shell.percent_possible_all 98.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1277 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4IJX _refine.ls_number_reflns_obs 20214 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.00 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 99.79 _refine.ls_R_factor_obs 0.19079 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18862 _refine.ls_R_factor_R_free 0.23205 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 1098 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.953 _refine.correlation_coeff_Fo_to_Fc_free 0.927 _refine.B_iso_mean 37.373 _refine.aniso_B[1][1] 0.32 _refine.aniso_B[2][2] 0.32 _refine.aniso_B[3][3] -0.64 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.pdbx_starting_model 3u53 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.176 _refine.overall_SU_ML 0.115 _refine.overall_SU_B 8.654 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2334 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 121 _refine_hist.number_atoms_total 2481 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 30.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.019 ? 2472 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.642 1.960 ? 3357 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.226 5.000 ? 303 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.609 24.320 ? 125 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.117 15.000 ? 435 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.644 15.000 ? 16 'X-RAY DIFFRACTION' ? r_chiral_restr 0.123 0.200 ? 365 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.021 ? 1881 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.103 _refine_ls_shell.d_res_low 2.157 _refine_ls_shell.number_reflns_R_work 1277 _refine_ls_shell.R_factor_R_work 0.206 _refine_ls_shell.percent_reflns_obs 98.91 _refine_ls_shell.R_factor_R_free 0.253 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 82 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 4IJX _struct.title 'Crystal structure of human Ap4A hydrolase E58A mutant complexed with DPO' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4IJX _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'NUDIX FOLD, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 6 ? I N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 50 ? GLY A 64 ? ASP A 50 GLY A 64 1 ? 15 HELX_P HELX_P2 2 GLU A 66 ? GLY A 68 ? GLU A 66 GLY A 68 5 ? 3 HELX_P HELX_P3 3 GLY A 118 ? GLN A 127 ? GLY A 118 GLN A 127 1 ? 10 HELX_P HELX_P4 4 PHE A 128 ? HIS A 150 ? PHE A 128 HIS A 150 1 ? 23 HELX_P HELX_P5 5 ASP B 50 ? GLY B 64 ? ASP B 50 GLY B 64 1 ? 15 HELX_P HELX_P6 6 GLU B 66 ? GLY B 68 ? GLU B 66 GLY B 68 5 ? 3 HELX_P HELX_P7 7 GLY B 118 ? GLN B 127 ? GLY B 118 GLN B 127 1 ? 10 HELX_P HELX_P8 8 PHE B 128 ? LEU B 148 ? PHE B 128 LEU B 148 1 ? 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 4 ? C ? 5 ? D ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? parallel C 4 5 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TRP A 38 ? THR A 39 ? TRP A 38 THR A 39 A 2 ILE A 24 ? ALA A 31 ? ILE A 24 ALA A 31 A 3 ALA A 5 ? ARG A 13 ? ALA A 5 ARG A 13 A 4 LYS A 87 ? VAL A 98 ? LYS A 87 VAL A 98 A 5 LEU A 70 ? ALA A 84 ? LEU A 70 ALA A 84 B 1 LYS A 42 ? HIS A 44 ? LYS A 42 HIS A 44 B 2 ALA A 5 ? ARG A 13 ? ALA A 5 ARG A 13 B 3 ILE A 24 ? ALA A 31 ? ILE A 24 ALA A 31 B 4 HIS A 111 ? LEU A 117 ? HIS A 111 LEU A 117 C 1 TRP B 38 ? THR B 39 ? TRP B 38 THR B 39 C 2 ILE B 24 ? ALA B 31 ? ILE B 24 ALA B 31 C 3 ARG B 4 ? ARG B 13 ? ARG B 4 ARG B 13 C 4 PRO B 88 ? VAL B 98 ? PRO B 88 VAL B 98 C 5 LEU B 70 ? VAL B 83 ? LEU B 70 VAL B 83 D 1 LYS B 42 ? HIS B 44 ? LYS B 42 HIS B 44 D 2 ARG B 4 ? ARG B 13 ? ARG B 4 ARG B 13 D 3 ILE B 24 ? ALA B 31 ? ILE B 24 ALA B 31 D 4 HIS B 111 ? LEU B 117 ? HIS B 111 LEU B 117 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 39 ? O THR A 39 N LEU A 29 ? N LEU A 29 A 2 3 O GLU A 25 ? O GLU A 25 N ARG A 12 ? N ARG A 12 A 3 4 N ILE A 9 ? N ILE A 9 O TRP A 94 ? O TRP A 94 A 4 5 O VAL A 91 ? O VAL A 91 N LEU A 80 ? N LEU A 80 B 1 2 O GLY A 43 ? O GLY A 43 N CYS A 6 ? N CYS A 6 B 2 3 N ARG A 12 ? N ARG A 12 O GLU A 25 ? O GLU A 25 B 3 4 N PHE A 26 ? N PHE A 26 O LEU A 117 ? O LEU A 117 C 1 2 O THR B 39 ? O THR B 39 N LEU B 29 ? N LEU B 29 C 2 3 O GLU B 25 ? O GLU B 25 N ARG B 12 ? N ARG B 12 C 3 4 N ILE B 9 ? N ILE B 9 O TRP B 94 ? O TRP B 94 C 4 5 O LYS B 89 ? O LYS B 89 N TYR B 82 ? N TYR B 82 D 1 2 O GLY B 43 ? O GLY B 43 N CYS B 6 ? N CYS B 6 D 2 3 N ARG B 12 ? N ARG B 12 O GLU B 25 ? O GLU B 25 D 3 4 N PHE B 26 ? N PHE B 26 O LEU B 117 ? O LEU B 117 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 201 ? 5 'BINDING SITE FOR RESIDUE MG A 201' AC2 Software A DPO 202 ? 3 'BINDING SITE FOR RESIDUE DPO A 202' AC3 Software A GOL 203 ? 7 'BINDING SITE FOR RESIDUE GOL A 203' AC4 Software B PO4 201 ? 9 'BINDING SITE FOR RESIDUE PO4 B 201' AC5 Software B PO4 202 ? 3 'BINDING SITE FOR RESIDUE PO4 B 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASP A 50 ? ASP A 50 . ? 1_555 ? 2 AC1 5 GLU A 53 ? GLU A 53 . ? 1_555 ? 3 AC1 5 GLN A 140 ? GLN A 140 . ? 4_455 ? 4 AC1 5 LYS B 77 ? LYS B 77 . ? 4_455 ? 5 AC1 5 TRP B 94 ? TRP B 94 . ? 4_455 ? 6 AC2 3 LYS A 42 ? LYS A 42 . ? 1_555 ? 7 AC2 3 TYR A 82 ? TYR A 82 . ? 1_555 ? 8 AC2 3 LYS A 89 ? LYS A 89 . ? 1_555 ? 9 AC3 7 ASN A 22 ? ASN A 22 . ? 1_555 ? 10 AC3 7 ALA A 23 ? ALA A 23 . ? 1_555 ? 11 AC3 7 ILE A 24 ? ILE A 24 . ? 1_555 ? 12 AC3 7 GLY A 118 ? GLY A 118 . ? 1_555 ? 13 AC3 7 LEU A 119 ? LEU A 119 . ? 1_555 ? 14 AC3 7 HIS A 139 ? HIS A 139 . ? 1_555 ? 15 AC3 7 HOH H . ? HOH A 337 . ? 1_555 ? 16 AC4 9 ARG A 12 ? ARG A 12 . ? 7_565 ? 17 AC4 9 TRP A 116 ? TRP A 116 . ? 7_565 ? 18 AC4 9 HOH H . ? HOH A 311 . ? 7_565 ? 19 AC4 9 TYR B 114 ? TYR B 114 . ? 1_555 ? 20 AC4 9 TRP B 116 ? TRP B 116 . ? 1_555 ? 21 AC4 9 HOH I . ? HOH B 304 . ? 1_555 ? 22 AC4 9 HOH I . ? HOH B 307 . ? 1_555 ? 23 AC4 9 HOH I . ? HOH B 312 . ? 1_555 ? 24 AC4 9 HOH I . ? HOH B 352 . ? 1_555 ? 25 AC5 3 LYS B 42 ? LYS B 42 . ? 1_555 ? 26 AC5 3 TYR B 82 ? TYR B 82 . ? 1_555 ? 27 AC5 3 LYS B 89 ? LYS B 89 . ? 1_555 ? # _database_PDB_matrix.entry_id 4IJX _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4IJX _atom_sites.fract_transf_matrix[1][1] 0.013818 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013818 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007497 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 LEU 3 3 ? ? ? A . n A 1 4 ARG 4 4 4 ARG ARG A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 CYS 6 6 6 CYS CYS A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 PHE 11 11 11 PHE PHE A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 ARG 13 13 13 ARG ARG A . n A 1 14 CYS 14 14 14 CYS CYS A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 ILE 16 16 16 ILE ILE A . n A 1 17 PRO 17 17 17 PRO PRO A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 ASN 21 21 21 ASN ASN A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ILE 24 24 24 ILE ILE A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 PHE 26 26 26 PHE PHE A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 GLN 30 30 30 GLN GLN A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 ILE 35 35 35 ILE ILE A . n A 1 36 HIS 36 36 36 HIS HIS A . n A 1 37 HIS 37 37 37 HIS HIS A . n A 1 38 TRP 38 38 38 TRP TRP A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 HIS 44 44 44 HIS HIS A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 GLU 53 53 53 GLU GLU A . n A 1 54 THR 54 54 54 THR THR A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 THR 59 59 59 THR THR A . n A 1 60 GLN 60 60 60 GLN GLN A . n A 1 61 GLU 61 61 61 GLU GLU A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 ILE 65 65 65 ILE ILE A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 GLN 69 69 69 GLN GLN A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 ARG 78 78 78 ARG ARG A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 ASN 81 81 81 ASN ASN A . n A 1 82 TYR 82 82 82 TYR TYR A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 ARG 85 85 85 ARG ARG A . n A 1 86 ASN 86 86 86 ASN ASN A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 PRO 88 88 88 PRO PRO A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 THR 90 90 90 THR THR A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 ILE 92 92 92 ILE ILE A . n A 1 93 TYR 93 93 93 TYR TYR A . n A 1 94 TRP 94 94 94 TRP TRP A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 VAL 98 98 98 VAL VAL A . n A 1 99 LYS 99 99 99 LYS LYS A . n A 1 100 ASP 100 100 100 ASP ASP A . n A 1 101 TYR 101 101 101 TYR TYR A . n A 1 102 ASP 102 102 102 ASP ASP A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 ILE 105 105 105 ILE ILE A . n A 1 106 ARG 106 106 106 ARG ARG A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 SER 108 108 108 SER SER A . n A 1 109 HIS 109 109 109 HIS HIS A . n A 1 110 GLU 110 110 110 GLU GLU A . n A 1 111 HIS 111 111 111 HIS HIS A . n A 1 112 GLN 112 112 112 GLN GLN A . n A 1 113 ALA 113 113 113 ALA ALA A . n A 1 114 TYR 114 114 114 TYR TYR A . n A 1 115 ARG 115 115 115 ARG ARG A . n A 1 116 TRP 116 116 116 TRP TRP A . n A 1 117 LEU 117 117 117 LEU LEU A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 GLU 121 121 121 GLU GLU A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 CYS 123 123 123 CYS CYS A . n A 1 124 GLN 124 124 124 GLN GLN A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 ALA 126 126 126 ALA ALA A . n A 1 127 GLN 127 127 127 GLN GLN A . n A 1 128 PHE 128 128 128 PHE PHE A . n A 1 129 LYS 129 129 129 LYS LYS A . n A 1 130 GLU 130 130 130 GLU GLU A . n A 1 131 MET 131 131 131 MET MET A . n A 1 132 LYS 132 132 132 LYS LYS A . n A 1 133 ALA 133 133 133 ALA ALA A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 GLN 136 136 136 GLN GLN A . n A 1 137 GLU 137 137 137 GLU GLU A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 HIS 139 139 139 HIS HIS A . n A 1 140 GLN 140 140 140 GLN GLN A . n A 1 141 PHE 141 141 141 PHE PHE A . n A 1 142 LEU 142 142 142 LEU LEU A . n A 1 143 CYS 143 143 143 CYS CYS A . n A 1 144 SER 144 144 144 SER SER A . n A 1 145 ILE 145 145 145 ILE ILE A . n A 1 146 GLU 146 146 146 GLU GLU A . n A 1 147 ALA 147 147 147 ALA ALA A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 GLU 149 149 149 GLU GLU A . n A 1 150 HIS 150 150 150 HIS HIS A . n A 1 151 HIS 151 151 ? ? ? A . n A 1 152 HIS 152 152 ? ? ? A . n A 1 153 HIS 153 153 ? ? ? A . n A 1 154 HIS 154 154 ? ? ? A . n A 1 155 HIS 155 155 ? ? ? A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 ALA 2 2 ? ? ? B . n B 1 3 LEU 3 3 3 LEU LEU B . n B 1 4 ARG 4 4 4 ARG ARG B . n B 1 5 ALA 5 5 5 ALA ALA B . n B 1 6 CYS 6 6 6 CYS CYS B . n B 1 7 GLY 7 7 7 GLY GLY B . n B 1 8 LEU 8 8 8 LEU LEU B . n B 1 9 ILE 9 9 9 ILE ILE B . n B 1 10 ILE 10 10 10 ILE ILE B . n B 1 11 PHE 11 11 11 PHE PHE B . n B 1 12 ARG 12 12 12 ARG ARG B . n B 1 13 ARG 13 13 13 ARG ARG B . n B 1 14 CYS 14 14 14 CYS CYS B . n B 1 15 LEU 15 15 15 LEU LEU B . n B 1 16 ILE 16 16 16 ILE ILE B . n B 1 17 PRO 17 17 17 PRO PRO B . n B 1 18 LYS 18 18 18 LYS LYS B . n B 1 19 VAL 19 19 ? ? ? B . n B 1 20 ASP 20 20 ? ? ? B . n B 1 21 ASN 21 21 ? ? ? B . n B 1 22 ASN 22 22 22 ASN ASN B . n B 1 23 ALA 23 23 23 ALA ALA B . n B 1 24 ILE 24 24 24 ILE ILE B . n B 1 25 GLU 25 25 25 GLU GLU B . n B 1 26 PHE 26 26 26 PHE PHE B . n B 1 27 LEU 27 27 27 LEU LEU B . n B 1 28 LEU 28 28 28 LEU LEU B . n B 1 29 LEU 29 29 29 LEU LEU B . n B 1 30 GLN 30 30 30 GLN GLN B . n B 1 31 ALA 31 31 31 ALA ALA B . n B 1 32 SER 32 32 32 SER SER B . n B 1 33 ASP 33 33 33 ASP ASP B . n B 1 34 GLY 34 34 34 GLY ALA B . n B 1 35 ILE 35 35 35 ILE ILE B . n B 1 36 HIS 36 36 36 HIS HIS B . n B 1 37 HIS 37 37 37 HIS HIS B . n B 1 38 TRP 38 38 38 TRP TRP B . n B 1 39 THR 39 39 39 THR THR B . n B 1 40 PRO 40 40 40 PRO PRO B . n B 1 41 PRO 41 41 41 PRO PRO B . n B 1 42 LYS 42 42 42 LYS LYS B . n B 1 43 GLY 43 43 43 GLY GLY B . n B 1 44 HIS 44 44 44 HIS HIS B . n B 1 45 VAL 45 45 45 VAL VAL B . n B 1 46 GLU 46 46 46 GLU GLU B . n B 1 47 PRO 47 47 47 PRO PRO B . n B 1 48 GLY 48 48 48 GLY GLY B . n B 1 49 GLU 49 49 49 GLU GLU B . n B 1 50 ASP 50 50 50 ASP ASP B . n B 1 51 ASP 51 51 51 ASP ASP B . n B 1 52 LEU 52 52 52 LEU LEU B . n B 1 53 GLU 53 53 53 GLU GLU B . n B 1 54 THR 54 54 54 THR THR B . n B 1 55 ALA 55 55 55 ALA ALA B . n B 1 56 LEU 56 56 56 LEU LEU B . n B 1 57 ARG 57 57 57 ARG ARG B . n B 1 58 ALA 58 58 58 ALA ALA B . n B 1 59 THR 59 59 59 THR THR B . n B 1 60 GLN 60 60 60 GLN GLN B . n B 1 61 GLU 61 61 61 GLU GLU B . n B 1 62 GLU 62 62 62 GLU GLU B . n B 1 63 ALA 63 63 63 ALA ALA B . n B 1 64 GLY 64 64 64 GLY GLY B . n B 1 65 ILE 65 65 65 ILE ILE B . n B 1 66 GLU 66 66 66 GLU GLU B . n B 1 67 ALA 67 67 67 ALA ALA B . n B 1 68 GLY 68 68 68 GLY GLY B . n B 1 69 GLN 69 69 69 GLN GLN B . n B 1 70 LEU 70 70 70 LEU LEU B . n B 1 71 THR 71 71 71 THR THR B . n B 1 72 ILE 72 72 72 ILE ILE B . n B 1 73 ILE 73 73 73 ILE ILE B . n B 1 74 GLU 74 74 74 GLU GLU B . n B 1 75 GLY 75 75 75 GLY GLY B . n B 1 76 PHE 76 76 76 PHE PHE B . n B 1 77 LYS 77 77 77 LYS LYS B . n B 1 78 ARG 78 78 78 ARG ARG B . n B 1 79 GLU 79 79 79 GLU GLU B . n B 1 80 LEU 80 80 80 LEU LEU B . n B 1 81 ASN 81 81 81 ASN ASN B . n B 1 82 TYR 82 82 82 TYR TYR B . n B 1 83 VAL 83 83 83 VAL VAL B . n B 1 84 ALA 84 84 84 ALA ALA B . n B 1 85 ARG 85 85 85 ARG ARG B . n B 1 86 ASN 86 86 86 ASN ASN B . n B 1 87 LYS 87 87 87 LYS LYS B . n B 1 88 PRO 88 88 88 PRO PRO B . n B 1 89 LYS 89 89 89 LYS LYS B . n B 1 90 THR 90 90 90 THR THR B . n B 1 91 VAL 91 91 91 VAL VAL B . n B 1 92 ILE 92 92 92 ILE ILE B . n B 1 93 TYR 93 93 93 TYR TYR B . n B 1 94 TRP 94 94 94 TRP TRP B . n B 1 95 LEU 95 95 95 LEU LEU B . n B 1 96 ALA 96 96 96 ALA ALA B . n B 1 97 GLU 97 97 97 GLU GLU B . n B 1 98 VAL 98 98 98 VAL VAL B . n B 1 99 LYS 99 99 99 LYS LYS B . n B 1 100 ASP 100 100 100 ASP ASP B . n B 1 101 TYR 101 101 101 TYR TYR B . n B 1 102 ASP 102 102 102 ASP ASP B . n B 1 103 VAL 103 103 103 VAL VAL B . n B 1 104 GLU 104 104 104 GLU GLU B . n B 1 105 ILE 105 105 105 ILE ILE B . n B 1 106 ARG 106 106 106 ARG ARG B . n B 1 107 LEU 107 107 107 LEU LEU B . n B 1 108 SER 108 108 108 SER SER B . n B 1 109 HIS 109 109 109 HIS HIS B . n B 1 110 GLU 110 110 110 GLU GLU B . n B 1 111 HIS 111 111 111 HIS HIS B . n B 1 112 GLN 112 112 112 GLN GLN B . n B 1 113 ALA 113 113 113 ALA ALA B . n B 1 114 TYR 114 114 114 TYR TYR B . n B 1 115 ARG 115 115 115 ARG ARG B . n B 1 116 TRP 116 116 116 TRP TRP B . n B 1 117 LEU 117 117 117 LEU LEU B . n B 1 118 GLY 118 118 118 GLY GLY B . n B 1 119 LEU 119 119 119 LEU LEU B . n B 1 120 GLU 120 120 120 GLU GLU B . n B 1 121 GLU 121 121 121 GLU GLU B . n B 1 122 ALA 122 122 122 ALA ALA B . n B 1 123 CYS 123 123 123 CYS CYS B . n B 1 124 GLN 124 124 124 GLN GLN B . n B 1 125 LEU 125 125 125 LEU LEU B . n B 1 126 ALA 126 126 126 ALA ALA B . n B 1 127 GLN 127 127 127 GLN GLN B . n B 1 128 PHE 128 128 128 PHE PHE B . n B 1 129 LYS 129 129 129 LYS LYS B . n B 1 130 GLU 130 130 130 GLU GLU B . n B 1 131 MET 131 131 131 MET MET B . n B 1 132 LYS 132 132 132 LYS LYS B . n B 1 133 ALA 133 133 133 ALA ALA B . n B 1 134 ALA 134 134 134 ALA ALA B . n B 1 135 LEU 135 135 135 LEU LEU B . n B 1 136 GLN 136 136 136 GLN GLN B . n B 1 137 GLU 137 137 137 GLU GLU B . n B 1 138 GLY 138 138 138 GLY GLY B . n B 1 139 HIS 139 139 139 HIS HIS B . n B 1 140 GLN 140 140 140 GLN GLN B . n B 1 141 PHE 141 141 141 PHE PHE B . n B 1 142 LEU 142 142 142 LEU LEU B . n B 1 143 CYS 143 143 143 CYS CYS B . n B 1 144 SER 144 144 144 SER SER B . n B 1 145 ILE 145 145 145 ILE ILE B . n B 1 146 GLU 146 146 146 GLU GLU B . n B 1 147 ALA 147 147 147 ALA ALA B . n B 1 148 LEU 148 148 148 LEU LEU B . n B 1 149 GLU 149 149 ? ? ? B . n B 1 150 HIS 150 150 ? ? ? B . n B 1 151 HIS 151 151 ? ? ? B . n B 1 152 HIS 152 152 ? ? ? B . n B 1 153 HIS 153 153 ? ? ? B . n B 1 154 HIS 154 154 ? ? ? B . n B 1 155 HIS 155 155 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 201 1 MG MG A . D 3 DPO 1 202 1 DPO DPO A . E 4 GOL 1 203 1 GOL GOL A . F 5 PO4 1 201 1 PO4 PO4 B . G 5 PO4 1 202 2 PO4 PO4 B . H 6 HOH 1 301 1 HOH HOH A . H 6 HOH 2 302 2 HOH HOH A . H 6 HOH 3 303 3 HOH HOH A . H 6 HOH 4 304 4 HOH HOH A . H 6 HOH 5 305 5 HOH HOH A . H 6 HOH 6 306 7 HOH HOH A . H 6 HOH 7 307 10 HOH HOH A . H 6 HOH 8 308 11 HOH HOH A . H 6 HOH 9 309 12 HOH HOH A . H 6 HOH 10 310 15 HOH HOH A . H 6 HOH 11 311 16 HOH HOH A . H 6 HOH 12 312 19 HOH HOH A . H 6 HOH 13 313 24 HOH HOH A . H 6 HOH 14 314 28 HOH HOH A . H 6 HOH 15 315 29 HOH HOH A . H 6 HOH 16 316 30 HOH HOH A . H 6 HOH 17 317 35 HOH HOH A . H 6 HOH 18 318 38 HOH HOH A . H 6 HOH 19 319 39 HOH HOH A . H 6 HOH 20 320 40 HOH HOH A . H 6 HOH 21 321 41 HOH HOH A . H 6 HOH 22 322 47 HOH HOH A . H 6 HOH 23 323 50 HOH HOH A . H 6 HOH 24 324 51 HOH HOH A . H 6 HOH 25 325 54 HOH HOH A . H 6 HOH 26 326 56 HOH HOH A . H 6 HOH 27 327 57 HOH HOH A . H 6 HOH 28 328 59 HOH HOH A . H 6 HOH 29 329 60 HOH HOH A . H 6 HOH 30 330 61 HOH HOH A . H 6 HOH 31 331 62 HOH HOH A . H 6 HOH 32 332 65 HOH HOH A . H 6 HOH 33 333 66 HOH HOH A . H 6 HOH 34 334 67 HOH HOH A . H 6 HOH 35 335 73 HOH HOH A . H 6 HOH 36 336 79 HOH HOH A . H 6 HOH 37 337 81 HOH HOH A . H 6 HOH 38 338 83 HOH HOH A . H 6 HOH 39 339 84 HOH HOH A . H 6 HOH 40 340 85 HOH HOH A . H 6 HOH 41 341 88 HOH HOH A . H 6 HOH 42 342 89 HOH HOH A . H 6 HOH 43 343 90 HOH HOH A . H 6 HOH 44 344 94 HOH HOH A . H 6 HOH 45 345 96 HOH HOH A . H 6 HOH 46 346 99 HOH HOH A . H 6 HOH 47 347 100 HOH HOH A . H 6 HOH 48 348 101 HOH HOH A . H 6 HOH 49 349 102 HOH HOH A . H 6 HOH 50 350 107 HOH HOH A . H 6 HOH 51 351 113 HOH HOH A . H 6 HOH 52 352 114 HOH HOH A . H 6 HOH 53 353 125 HOH HOH A . H 6 HOH 54 354 127 HOH HOH A . H 6 HOH 55 355 128 HOH HOH A . H 6 HOH 56 356 131 HOH HOH A . H 6 HOH 57 357 133 HOH HOH A . H 6 HOH 58 358 135 HOH HOH A . H 6 HOH 59 359 136 HOH HOH A . H 6 HOH 60 360 137 HOH HOH A . H 6 HOH 61 361 138 HOH HOH A . H 6 HOH 62 362 139 HOH HOH A . H 6 HOH 63 363 141 HOH HOH A . H 6 HOH 64 364 142 HOH HOH A . H 6 HOH 65 365 143 HOH HOH A . H 6 HOH 66 366 144 HOH HOH A . I 6 HOH 1 301 6 HOH HOH B . I 6 HOH 2 302 13 HOH HOH B . I 6 HOH 3 303 14 HOH HOH B . I 6 HOH 4 304 17 HOH HOH B . I 6 HOH 5 305 18 HOH HOH B . I 6 HOH 6 306 20 HOH HOH B . I 6 HOH 7 307 21 HOH HOH B . I 6 HOH 8 308 22 HOH HOH B . I 6 HOH 9 309 25 HOH HOH B . I 6 HOH 10 310 26 HOH HOH B . I 6 HOH 11 311 31 HOH HOH B . I 6 HOH 12 312 32 HOH HOH B . I 6 HOH 13 313 33 HOH HOH B . I 6 HOH 14 314 34 HOH HOH B . I 6 HOH 15 315 36 HOH HOH B . I 6 HOH 16 316 42 HOH HOH B . I 6 HOH 17 317 43 HOH HOH B . I 6 HOH 18 318 46 HOH HOH B . I 6 HOH 19 319 53 HOH HOH B . I 6 HOH 20 320 55 HOH HOH B . I 6 HOH 21 321 64 HOH HOH B . I 6 HOH 22 322 68 HOH HOH B . I 6 HOH 23 323 69 HOH HOH B . I 6 HOH 24 324 70 HOH HOH B . I 6 HOH 25 325 71 HOH HOH B . I 6 HOH 26 326 72 HOH HOH B . I 6 HOH 27 327 75 HOH HOH B . I 6 HOH 28 328 76 HOH HOH B . I 6 HOH 29 329 77 HOH HOH B . I 6 HOH 30 330 78 HOH HOH B . I 6 HOH 31 331 92 HOH HOH B . I 6 HOH 32 332 93 HOH HOH B . I 6 HOH 33 333 95 HOH HOH B . I 6 HOH 34 334 97 HOH HOH B . I 6 HOH 35 335 103 HOH HOH B . I 6 HOH 36 336 105 HOH HOH B . I 6 HOH 37 337 108 HOH HOH B . I 6 HOH 38 338 110 HOH HOH B . I 6 HOH 39 339 112 HOH HOH B . I 6 HOH 40 340 115 HOH HOH B . I 6 HOH 41 341 117 HOH HOH B . I 6 HOH 42 342 118 HOH HOH B . I 6 HOH 43 343 120 HOH HOH B . I 6 HOH 44 344 123 HOH HOH B . I 6 HOH 45 345 129 HOH HOH B . I 6 HOH 46 346 130 HOH HOH B . I 6 HOH 47 347 132 HOH HOH B . I 6 HOH 48 348 134 HOH HOH B . I 6 HOH 49 349 140 HOH HOH B . I 6 HOH 50 350 145 HOH HOH B . I 6 HOH 51 351 146 HOH HOH B . I 6 HOH 52 352 147 HOH HOH B . I 6 HOH 53 353 148 HOH HOH B . I 6 HOH 54 354 149 HOH HOH B . I 6 HOH 55 355 150 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 3 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,H 2 1 B,F,G,I 3 1 A,C,D,E,H 3 2 B,F,G,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 3 'ABSA (A^2)' 2430 ? 3 MORE -21 ? 3 'SSA (A^2)' 15410 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_455 y-1,x,-z 0.0000000000 1.0000000000 0.0000000000 -72.3690000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-03-20 2 'Structure model' 1 1 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' struct_ref_seq_dif 6 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_ref_seq_dif.details' 4 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -8.0638 23.2601 4.4822 0.1020 0.0264 0.0592 -0.0341 0.0513 -0.0278 0.4601 0.6212 0.3229 0.5286 -0.3650 -0.4006 -0.1241 0.0731 -0.1099 -0.1485 0.0754 -0.1443 0.0323 -0.0475 0.0487 'X-RAY DIFFRACTION' 2 ? refined -12.7863 34.4201 16.1955 0.0431 0.0819 0.0315 0.0085 0.0289 -0.0000 0.6354 0.9964 0.4087 0.4252 0.0693 0.1044 0.0601 -0.1228 0.0022 0.1012 -0.0116 0.0736 -0.0898 -0.1095 -0.0485 'X-RAY DIFFRACTION' 3 ? refined -8.3481 36.2224 9.1461 0.0653 0.0185 0.0311 -0.0018 -0.0072 -0.0088 0.1402 1.0972 0.8772 0.3366 -0.1921 -0.2018 0.0633 -0.0252 -0.0131 0.0115 -0.0789 0.0012 -0.1367 -0.0039 0.0156 'X-RAY DIFFRACTION' 4 ? refined -11.3676 29.3424 4.0932 0.0223 0.0380 0.0152 -0.0189 0.0103 -0.0161 1.1505 0.6816 1.0815 0.0809 -0.6126 -0.2884 -0.0020 0.0968 0.0200 -0.0862 0.0116 0.0133 0.0701 -0.1339 -0.0096 'X-RAY DIFFRACTION' 5 ? refined 9.1840 46.3498 -5.2131 0.0597 0.0547 0.0685 -0.0103 0.0029 0.0003 1.1301 1.9032 0.9261 0.3047 0.9002 -0.3541 -0.1270 -0.1615 -0.0597 -0.0499 0.0532 -0.2238 -0.1339 -0.1443 0.0738 'X-RAY DIFFRACTION' 6 ? refined 0.1902 51.9631 -11.7856 0.0862 0.0370 0.0389 0.0189 0.0190 0.0306 1.5395 1.6598 0.1247 0.2888 0.2476 0.2646 0.0953 0.1377 0.2228 -0.2012 -0.1121 0.0173 -0.0588 -0.0017 0.0168 'X-RAY DIFFRACTION' 7 ? refined 3.1930 49.6753 -9.8684 0.0472 0.0215 0.0067 -0.0155 -0.0035 -0.0044 1.3607 0.8042 0.5347 0.1027 -0.2431 0.0773 -0.0916 0.1286 -0.0111 -0.0584 0.0425 -0.0134 -0.0619 -0.0547 0.0491 'X-RAY DIFFRACTION' 8 ? refined 4.3363 46.4832 2.9432 0.0640 0.0338 0.0322 -0.0259 0.0047 0.0005 1.7618 1.3779 0.7016 0.3243 0.4495 -0.7940 0.0128 -0.1479 -0.0717 0.1898 -0.0039 0.0333 -0.1421 -0.0272 -0.0089 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 4 ? ? A 26 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 27 ? ? A 69 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 70 ? ? A 102 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 103 ? ? A 150 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 B 3 ? ? B 23 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 B 24 ? ? B 60 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 B 61 ? ? B 117 ? ? ? ? 'X-RAY DIFFRACTION' 8 8 B 118 ? ? B 148 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.6.0117 ? 1 HKL-2000 'data scaling' . ? 2 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CE2 _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 TRP _pdbx_validate_rmsd_bond.auth_seq_id_1 38 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CD2 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 TRP _pdbx_validate_rmsd_bond.auth_seq_id_2 38 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.483 _pdbx_validate_rmsd_bond.bond_target_value 1.409 _pdbx_validate_rmsd_bond.bond_deviation 0.074 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 115 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 115 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 115 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.33 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 3.03 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 33 ? ? -110.17 -164.58 2 1 GLN A 127 ? ? 69.94 -60.01 3 1 ARG B 85 ? ? 81.67 5.78 4 1 GLN B 127 ? ? 70.33 -58.43 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A GLN 124 ? NE2 ? A GLN 124 NE2 2 1 Y 1 B LYS 18 ? CG ? B LYS 18 CG 3 1 Y 1 B LYS 18 ? CD ? B LYS 18 CD 4 1 Y 1 B LYS 18 ? CE ? B LYS 18 CE 5 1 Y 1 B LYS 18 ? NZ ? B LYS 18 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A LEU 3 ? A LEU 3 4 1 Y 1 A HIS 151 ? A HIS 151 5 1 Y 1 A HIS 152 ? A HIS 152 6 1 Y 1 A HIS 153 ? A HIS 153 7 1 Y 1 A HIS 154 ? A HIS 154 8 1 Y 1 A HIS 155 ? A HIS 155 9 1 Y 1 B MET 1 ? B MET 1 10 1 Y 1 B ALA 2 ? B ALA 2 11 1 Y 1 B VAL 19 ? B VAL 19 12 1 Y 1 B ASP 20 ? B ASP 20 13 1 Y 1 B ASN 21 ? B ASN 21 14 1 Y 1 B GLU 149 ? B GLU 149 15 1 Y 1 B HIS 150 ? B HIS 150 16 1 Y 1 B HIS 151 ? B HIS 151 17 1 Y 1 B HIS 152 ? B HIS 152 18 1 Y 1 B HIS 153 ? B HIS 153 19 1 Y 1 B HIS 154 ? B HIS 154 20 1 Y 1 B HIS 155 ? B HIS 155 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DPO P1 P N N 88 DPO O1 O N N 89 DPO O2 O N N 90 DPO O3 O N N 91 DPO O4 O N N 92 DPO P2 P N N 93 DPO O5 O N N 94 DPO O6 O N N 95 DPO O7 O N N 96 GLN N N N N 97 GLN CA C N S 98 GLN C C N N 99 GLN O O N N 100 GLN CB C N N 101 GLN CG C N N 102 GLN CD C N N 103 GLN OE1 O N N 104 GLN NE2 N N N 105 GLN OXT O N N 106 GLN H H N N 107 GLN H2 H N N 108 GLN HA H N N 109 GLN HB2 H N N 110 GLN HB3 H N N 111 GLN HG2 H N N 112 GLN HG3 H N N 113 GLN HE21 H N N 114 GLN HE22 H N N 115 GLN HXT H N N 116 GLU N N N N 117 GLU CA C N S 118 GLU C C N N 119 GLU O O N N 120 GLU CB C N N 121 GLU CG C N N 122 GLU CD C N N 123 GLU OE1 O N N 124 GLU OE2 O N N 125 GLU OXT O N N 126 GLU H H N N 127 GLU H2 H N N 128 GLU HA H N N 129 GLU HB2 H N N 130 GLU HB3 H N N 131 GLU HG2 H N N 132 GLU HG3 H N N 133 GLU HE2 H N N 134 GLU HXT H N N 135 GLY N N N N 136 GLY CA C N N 137 GLY C C N N 138 GLY O O N N 139 GLY OXT O N N 140 GLY H H N N 141 GLY H2 H N N 142 GLY HA2 H N N 143 GLY HA3 H N N 144 GLY HXT H N N 145 GOL C1 C N N 146 GOL O1 O N N 147 GOL C2 C N N 148 GOL O2 O N N 149 GOL C3 C N N 150 GOL O3 O N N 151 GOL H11 H N N 152 GOL H12 H N N 153 GOL HO1 H N N 154 GOL H2 H N N 155 GOL HO2 H N N 156 GOL H31 H N N 157 GOL H32 H N N 158 GOL HO3 H N N 159 HIS N N N N 160 HIS CA C N S 161 HIS C C N N 162 HIS O O N N 163 HIS CB C N N 164 HIS CG C Y N 165 HIS ND1 N Y N 166 HIS CD2 C Y N 167 HIS CE1 C Y N 168 HIS NE2 N Y N 169 HIS OXT O N N 170 HIS H H N N 171 HIS H2 H N N 172 HIS HA H N N 173 HIS HB2 H N N 174 HIS HB3 H N N 175 HIS HD1 H N N 176 HIS HD2 H N N 177 HIS HE1 H N N 178 HIS HE2 H N N 179 HIS HXT H N N 180 HOH O O N N 181 HOH H1 H N N 182 HOH H2 H N N 183 ILE N N N N 184 ILE CA C N S 185 ILE C C N N 186 ILE O O N N 187 ILE CB C N S 188 ILE CG1 C N N 189 ILE CG2 C N N 190 ILE CD1 C N N 191 ILE OXT O N N 192 ILE H H N N 193 ILE H2 H N N 194 ILE HA H N N 195 ILE HB H N N 196 ILE HG12 H N N 197 ILE HG13 H N N 198 ILE HG21 H N N 199 ILE HG22 H N N 200 ILE HG23 H N N 201 ILE HD11 H N N 202 ILE HD12 H N N 203 ILE HD13 H N N 204 ILE HXT H N N 205 LEU N N N N 206 LEU CA C N S 207 LEU C C N N 208 LEU O O N N 209 LEU CB C N N 210 LEU CG C N N 211 LEU CD1 C N N 212 LEU CD2 C N N 213 LEU OXT O N N 214 LEU H H N N 215 LEU H2 H N N 216 LEU HA H N N 217 LEU HB2 H N N 218 LEU HB3 H N N 219 LEU HG H N N 220 LEU HD11 H N N 221 LEU HD12 H N N 222 LEU HD13 H N N 223 LEU HD21 H N N 224 LEU HD22 H N N 225 LEU HD23 H N N 226 LEU HXT H N N 227 LYS N N N N 228 LYS CA C N S 229 LYS C C N N 230 LYS O O N N 231 LYS CB C N N 232 LYS CG C N N 233 LYS CD C N N 234 LYS CE C N N 235 LYS NZ N N N 236 LYS OXT O N N 237 LYS H H N N 238 LYS H2 H N N 239 LYS HA H N N 240 LYS HB2 H N N 241 LYS HB3 H N N 242 LYS HG2 H N N 243 LYS HG3 H N N 244 LYS HD2 H N N 245 LYS HD3 H N N 246 LYS HE2 H N N 247 LYS HE3 H N N 248 LYS HZ1 H N N 249 LYS HZ2 H N N 250 LYS HZ3 H N N 251 LYS HXT H N N 252 MET N N N N 253 MET CA C N S 254 MET C C N N 255 MET O O N N 256 MET CB C N N 257 MET CG C N N 258 MET SD S N N 259 MET CE C N N 260 MET OXT O N N 261 MET H H N N 262 MET H2 H N N 263 MET HA H N N 264 MET HB2 H N N 265 MET HB3 H N N 266 MET HG2 H N N 267 MET HG3 H N N 268 MET HE1 H N N 269 MET HE2 H N N 270 MET HE3 H N N 271 MET HXT H N N 272 MG MG MG N N 273 PHE N N N N 274 PHE CA C N S 275 PHE C C N N 276 PHE O O N N 277 PHE CB C N N 278 PHE CG C Y N 279 PHE CD1 C Y N 280 PHE CD2 C Y N 281 PHE CE1 C Y N 282 PHE CE2 C Y N 283 PHE CZ C Y N 284 PHE OXT O N N 285 PHE H H N N 286 PHE H2 H N N 287 PHE HA H N N 288 PHE HB2 H N N 289 PHE HB3 H N N 290 PHE HD1 H N N 291 PHE HD2 H N N 292 PHE HE1 H N N 293 PHE HE2 H N N 294 PHE HZ H N N 295 PHE HXT H N N 296 PO4 P P N N 297 PO4 O1 O N N 298 PO4 O2 O N N 299 PO4 O3 O N N 300 PO4 O4 O N N 301 PRO N N N N 302 PRO CA C N S 303 PRO C C N N 304 PRO O O N N 305 PRO CB C N N 306 PRO CG C N N 307 PRO CD C N N 308 PRO OXT O N N 309 PRO H H N N 310 PRO HA H N N 311 PRO HB2 H N N 312 PRO HB3 H N N 313 PRO HG2 H N N 314 PRO HG3 H N N 315 PRO HD2 H N N 316 PRO HD3 H N N 317 PRO HXT H N N 318 SER N N N N 319 SER CA C N S 320 SER C C N N 321 SER O O N N 322 SER CB C N N 323 SER OG O N N 324 SER OXT O N N 325 SER H H N N 326 SER H2 H N N 327 SER HA H N N 328 SER HB2 H N N 329 SER HB3 H N N 330 SER HG H N N 331 SER HXT H N N 332 THR N N N N 333 THR CA C N S 334 THR C C N N 335 THR O O N N 336 THR CB C N R 337 THR OG1 O N N 338 THR CG2 C N N 339 THR OXT O N N 340 THR H H N N 341 THR H2 H N N 342 THR HA H N N 343 THR HB H N N 344 THR HG1 H N N 345 THR HG21 H N N 346 THR HG22 H N N 347 THR HG23 H N N 348 THR HXT H N N 349 TRP N N N N 350 TRP CA C N S 351 TRP C C N N 352 TRP O O N N 353 TRP CB C N N 354 TRP CG C Y N 355 TRP CD1 C Y N 356 TRP CD2 C Y N 357 TRP NE1 N Y N 358 TRP CE2 C Y N 359 TRP CE3 C Y N 360 TRP CZ2 C Y N 361 TRP CZ3 C Y N 362 TRP CH2 C Y N 363 TRP OXT O N N 364 TRP H H N N 365 TRP H2 H N N 366 TRP HA H N N 367 TRP HB2 H N N 368 TRP HB3 H N N 369 TRP HD1 H N N 370 TRP HE1 H N N 371 TRP HE3 H N N 372 TRP HZ2 H N N 373 TRP HZ3 H N N 374 TRP HH2 H N N 375 TRP HXT H N N 376 TYR N N N N 377 TYR CA C N S 378 TYR C C N N 379 TYR O O N N 380 TYR CB C N N 381 TYR CG C Y N 382 TYR CD1 C Y N 383 TYR CD2 C Y N 384 TYR CE1 C Y N 385 TYR CE2 C Y N 386 TYR CZ C Y N 387 TYR OH O N N 388 TYR OXT O N N 389 TYR H H N N 390 TYR H2 H N N 391 TYR HA H N N 392 TYR HB2 H N N 393 TYR HB3 H N N 394 TYR HD1 H N N 395 TYR HD2 H N N 396 TYR HE1 H N N 397 TYR HE2 H N N 398 TYR HH H N N 399 TYR HXT H N N 400 VAL N N N N 401 VAL CA C N S 402 VAL C C N N 403 VAL O O N N 404 VAL CB C N N 405 VAL CG1 C N N 406 VAL CG2 C N N 407 VAL OXT O N N 408 VAL H H N N 409 VAL H2 H N N 410 VAL HA H N N 411 VAL HB H N N 412 VAL HG11 H N N 413 VAL HG12 H N N 414 VAL HG13 H N N 415 VAL HG21 H N N 416 VAL HG22 H N N 417 VAL HG23 H N N 418 VAL HXT H N N 419 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DPO P1 O1 doub N N 83 DPO P1 O2 sing N N 84 DPO P1 O3 sing N N 85 DPO P1 O4 sing N N 86 DPO O4 P2 sing N N 87 DPO P2 O5 doub N N 88 DPO P2 O6 sing N N 89 DPO P2 O7 sing N N 90 GLN N CA sing N N 91 GLN N H sing N N 92 GLN N H2 sing N N 93 GLN CA C sing N N 94 GLN CA CB sing N N 95 GLN CA HA sing N N 96 GLN C O doub N N 97 GLN C OXT sing N N 98 GLN CB CG sing N N 99 GLN CB HB2 sing N N 100 GLN CB HB3 sing N N 101 GLN CG CD sing N N 102 GLN CG HG2 sing N N 103 GLN CG HG3 sing N N 104 GLN CD OE1 doub N N 105 GLN CD NE2 sing N N 106 GLN NE2 HE21 sing N N 107 GLN NE2 HE22 sing N N 108 GLN OXT HXT sing N N 109 GLU N CA sing N N 110 GLU N H sing N N 111 GLU N H2 sing N N 112 GLU CA C sing N N 113 GLU CA CB sing N N 114 GLU CA HA sing N N 115 GLU C O doub N N 116 GLU C OXT sing N N 117 GLU CB CG sing N N 118 GLU CB HB2 sing N N 119 GLU CB HB3 sing N N 120 GLU CG CD sing N N 121 GLU CG HG2 sing N N 122 GLU CG HG3 sing N N 123 GLU CD OE1 doub N N 124 GLU CD OE2 sing N N 125 GLU OE2 HE2 sing N N 126 GLU OXT HXT sing N N 127 GLY N CA sing N N 128 GLY N H sing N N 129 GLY N H2 sing N N 130 GLY CA C sing N N 131 GLY CA HA2 sing N N 132 GLY CA HA3 sing N N 133 GLY C O doub N N 134 GLY C OXT sing N N 135 GLY OXT HXT sing N N 136 GOL C1 O1 sing N N 137 GOL C1 C2 sing N N 138 GOL C1 H11 sing N N 139 GOL C1 H12 sing N N 140 GOL O1 HO1 sing N N 141 GOL C2 O2 sing N N 142 GOL C2 C3 sing N N 143 GOL C2 H2 sing N N 144 GOL O2 HO2 sing N N 145 GOL C3 O3 sing N N 146 GOL C3 H31 sing N N 147 GOL C3 H32 sing N N 148 GOL O3 HO3 sing N N 149 HIS N CA sing N N 150 HIS N H sing N N 151 HIS N H2 sing N N 152 HIS CA C sing N N 153 HIS CA CB sing N N 154 HIS CA HA sing N N 155 HIS C O doub N N 156 HIS C OXT sing N N 157 HIS CB CG sing N N 158 HIS CB HB2 sing N N 159 HIS CB HB3 sing N N 160 HIS CG ND1 sing Y N 161 HIS CG CD2 doub Y N 162 HIS ND1 CE1 doub Y N 163 HIS ND1 HD1 sing N N 164 HIS CD2 NE2 sing Y N 165 HIS CD2 HD2 sing N N 166 HIS CE1 NE2 sing Y N 167 HIS CE1 HE1 sing N N 168 HIS NE2 HE2 sing N N 169 HIS OXT HXT sing N N 170 HOH O H1 sing N N 171 HOH O H2 sing N N 172 ILE N CA sing N N 173 ILE N H sing N N 174 ILE N H2 sing N N 175 ILE CA C sing N N 176 ILE CA CB sing N N 177 ILE CA HA sing N N 178 ILE C O doub N N 179 ILE C OXT sing N N 180 ILE CB CG1 sing N N 181 ILE CB CG2 sing N N 182 ILE CB HB sing N N 183 ILE CG1 CD1 sing N N 184 ILE CG1 HG12 sing N N 185 ILE CG1 HG13 sing N N 186 ILE CG2 HG21 sing N N 187 ILE CG2 HG22 sing N N 188 ILE CG2 HG23 sing N N 189 ILE CD1 HD11 sing N N 190 ILE CD1 HD12 sing N N 191 ILE CD1 HD13 sing N N 192 ILE OXT HXT sing N N 193 LEU N CA sing N N 194 LEU N H sing N N 195 LEU N H2 sing N N 196 LEU CA C sing N N 197 LEU CA CB sing N N 198 LEU CA HA sing N N 199 LEU C O doub N N 200 LEU C OXT sing N N 201 LEU CB CG sing N N 202 LEU CB HB2 sing N N 203 LEU CB HB3 sing N N 204 LEU CG CD1 sing N N 205 LEU CG CD2 sing N N 206 LEU CG HG sing N N 207 LEU CD1 HD11 sing N N 208 LEU CD1 HD12 sing N N 209 LEU CD1 HD13 sing N N 210 LEU CD2 HD21 sing N N 211 LEU CD2 HD22 sing N N 212 LEU CD2 HD23 sing N N 213 LEU OXT HXT sing N N 214 LYS N CA sing N N 215 LYS N H sing N N 216 LYS N H2 sing N N 217 LYS CA C sing N N 218 LYS CA CB sing N N 219 LYS CA HA sing N N 220 LYS C O doub N N 221 LYS C OXT sing N N 222 LYS CB CG sing N N 223 LYS CB HB2 sing N N 224 LYS CB HB3 sing N N 225 LYS CG CD sing N N 226 LYS CG HG2 sing N N 227 LYS CG HG3 sing N N 228 LYS CD CE sing N N 229 LYS CD HD2 sing N N 230 LYS CD HD3 sing N N 231 LYS CE NZ sing N N 232 LYS CE HE2 sing N N 233 LYS CE HE3 sing N N 234 LYS NZ HZ1 sing N N 235 LYS NZ HZ2 sing N N 236 LYS NZ HZ3 sing N N 237 LYS OXT HXT sing N N 238 MET N CA sing N N 239 MET N H sing N N 240 MET N H2 sing N N 241 MET CA C sing N N 242 MET CA CB sing N N 243 MET CA HA sing N N 244 MET C O doub N N 245 MET C OXT sing N N 246 MET CB CG sing N N 247 MET CB HB2 sing N N 248 MET CB HB3 sing N N 249 MET CG SD sing N N 250 MET CG HG2 sing N N 251 MET CG HG3 sing N N 252 MET SD CE sing N N 253 MET CE HE1 sing N N 254 MET CE HE2 sing N N 255 MET CE HE3 sing N N 256 MET OXT HXT sing N N 257 PHE N CA sing N N 258 PHE N H sing N N 259 PHE N H2 sing N N 260 PHE CA C sing N N 261 PHE CA CB sing N N 262 PHE CA HA sing N N 263 PHE C O doub N N 264 PHE C OXT sing N N 265 PHE CB CG sing N N 266 PHE CB HB2 sing N N 267 PHE CB HB3 sing N N 268 PHE CG CD1 doub Y N 269 PHE CG CD2 sing Y N 270 PHE CD1 CE1 sing Y N 271 PHE CD1 HD1 sing N N 272 PHE CD2 CE2 doub Y N 273 PHE CD2 HD2 sing N N 274 PHE CE1 CZ doub Y N 275 PHE CE1 HE1 sing N N 276 PHE CE2 CZ sing Y N 277 PHE CE2 HE2 sing N N 278 PHE CZ HZ sing N N 279 PHE OXT HXT sing N N 280 PO4 P O1 doub N N 281 PO4 P O2 sing N N 282 PO4 P O3 sing N N 283 PO4 P O4 sing N N 284 PRO N CA sing N N 285 PRO N CD sing N N 286 PRO N H sing N N 287 PRO CA C sing N N 288 PRO CA CB sing N N 289 PRO CA HA sing N N 290 PRO C O doub N N 291 PRO C OXT sing N N 292 PRO CB CG sing N N 293 PRO CB HB2 sing N N 294 PRO CB HB3 sing N N 295 PRO CG CD sing N N 296 PRO CG HG2 sing N N 297 PRO CG HG3 sing N N 298 PRO CD HD2 sing N N 299 PRO CD HD3 sing N N 300 PRO OXT HXT sing N N 301 SER N CA sing N N 302 SER N H sing N N 303 SER N H2 sing N N 304 SER CA C sing N N 305 SER CA CB sing N N 306 SER CA HA sing N N 307 SER C O doub N N 308 SER C OXT sing N N 309 SER CB OG sing N N 310 SER CB HB2 sing N N 311 SER CB HB3 sing N N 312 SER OG HG sing N N 313 SER OXT HXT sing N N 314 THR N CA sing N N 315 THR N H sing N N 316 THR N H2 sing N N 317 THR CA C sing N N 318 THR CA CB sing N N 319 THR CA HA sing N N 320 THR C O doub N N 321 THR C OXT sing N N 322 THR CB OG1 sing N N 323 THR CB CG2 sing N N 324 THR CB HB sing N N 325 THR OG1 HG1 sing N N 326 THR CG2 HG21 sing N N 327 THR CG2 HG22 sing N N 328 THR CG2 HG23 sing N N 329 THR OXT HXT sing N N 330 TRP N CA sing N N 331 TRP N H sing N N 332 TRP N H2 sing N N 333 TRP CA C sing N N 334 TRP CA CB sing N N 335 TRP CA HA sing N N 336 TRP C O doub N N 337 TRP C OXT sing N N 338 TRP CB CG sing N N 339 TRP CB HB2 sing N N 340 TRP CB HB3 sing N N 341 TRP CG CD1 doub Y N 342 TRP CG CD2 sing Y N 343 TRP CD1 NE1 sing Y N 344 TRP CD1 HD1 sing N N 345 TRP CD2 CE2 doub Y N 346 TRP CD2 CE3 sing Y N 347 TRP NE1 CE2 sing Y N 348 TRP NE1 HE1 sing N N 349 TRP CE2 CZ2 sing Y N 350 TRP CE3 CZ3 doub Y N 351 TRP CE3 HE3 sing N N 352 TRP CZ2 CH2 doub Y N 353 TRP CZ2 HZ2 sing N N 354 TRP CZ3 CH2 sing Y N 355 TRP CZ3 HZ3 sing N N 356 TRP CH2 HH2 sing N N 357 TRP OXT HXT sing N N 358 TYR N CA sing N N 359 TYR N H sing N N 360 TYR N H2 sing N N 361 TYR CA C sing N N 362 TYR CA CB sing N N 363 TYR CA HA sing N N 364 TYR C O doub N N 365 TYR C OXT sing N N 366 TYR CB CG sing N N 367 TYR CB HB2 sing N N 368 TYR CB HB3 sing N N 369 TYR CG CD1 doub Y N 370 TYR CG CD2 sing Y N 371 TYR CD1 CE1 sing Y N 372 TYR CD1 HD1 sing N N 373 TYR CD2 CE2 doub Y N 374 TYR CD2 HD2 sing N N 375 TYR CE1 CZ doub Y N 376 TYR CE1 HE1 sing N N 377 TYR CE2 CZ sing Y N 378 TYR CE2 HE2 sing N N 379 TYR CZ OH sing N N 380 TYR OH HH sing N N 381 TYR OXT HXT sing N N 382 VAL N CA sing N N 383 VAL N H sing N N 384 VAL N H2 sing N N 385 VAL CA C sing N N 386 VAL CA CB sing N N 387 VAL CA HA sing N N 388 VAL C O doub N N 389 VAL C OXT sing N N 390 VAL CB CG1 sing N N 391 VAL CB CG2 sing N N 392 VAL CB HB sing N N 393 VAL CG1 HG11 sing N N 394 VAL CG1 HG12 sing N N 395 VAL CG1 HG13 sing N N 396 VAL CG2 HG21 sing N N 397 VAL CG2 HG22 sing N N 398 VAL CG2 HG23 sing N N 399 VAL OXT HXT sing N N 400 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 DIPHOSPHATE DPO 4 GLYCEROL GOL 5 'PHOSPHATE ION' PO4 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3U53 _pdbx_initial_refinement_model.details ? #