HEADER SPLICING 31-DEC-12 4ILJ TITLE CRYSTAL STRUCTURE OF AN PRP8P RNASEH W1911A MUTANT PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PRE-MRNA-SPLICING FACTOR 8; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: YPRP8 RNASEH (UNP RESIDUES 1835-2090); COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: ATCC 204508 / S288C; SOURCE 6 GENE: PRP8, DBF3, DNA39, RNA8, SLT21, USA2, YHR165C; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS U5 SNRNP ASSEMBLY, AAR2, PRP8, SPLICING EXPDTA X-RAY DIFFRACTION AUTHOR G.WEBER,C.HEROVEN,K.F.SANTOS,M.C.WAHL REVDAT 3 20-SEP-23 4ILJ 1 SEQADV REVDAT 2 27-MAR-13 4ILJ 1 JRNL REVDAT 1 13-MAR-13 4ILJ 0 JRNL AUTH G.WEBER,V.F.CRISTAO,K.F.SANTOS,S.M.JOVIN,A.C.HEROVEN, JRNL AUTH 2 N.HOLTON,R.LUHRMANN,J.D.BEGGS,M.C.WAHL JRNL TITL STRUCTURAL BASIS FOR DUAL ROLES OF AAR2P IN U5 SNRNP JRNL TITL 2 ASSEMBLY. JRNL REF GENES DEV. V. 27 525 2013 JRNL REFN ISSN 0890-9369 JRNL PMID 23442228 JRNL DOI 10.1101/GAD.213207.113 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 42330 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2117 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.8067 - 4.9293 0.99 2861 150 0.1763 0.2035 REMARK 3 2 4.9293 - 3.9138 0.99 2717 143 0.1449 0.1634 REMARK 3 3 3.9138 - 3.4194 1.00 2720 143 0.1654 0.2181 REMARK 3 4 3.4194 - 3.1070 1.00 2699 142 0.1828 0.2420 REMARK 3 5 3.1070 - 2.8844 1.00 2696 142 0.1979 0.2672 REMARK 3 6 2.8844 - 2.7144 1.00 2638 139 0.1877 0.2553 REMARK 3 7 2.7144 - 2.5784 1.00 2682 141 0.1855 0.2271 REMARK 3 8 2.5784 - 2.4662 1.00 2680 142 0.1892 0.2520 REMARK 3 9 2.4662 - 2.3713 1.00 2653 139 0.1829 0.2403 REMARK 3 10 2.3713 - 2.2895 1.00 2651 140 0.1936 0.2513 REMARK 3 11 2.2895 - 2.2179 1.00 2657 140 0.2001 0.2764 REMARK 3 12 2.2179 - 2.1545 1.00 2643 139 0.2108 0.2591 REMARK 3 13 2.1545 - 2.0978 1.00 2648 139 0.2115 0.2871 REMARK 3 14 2.0978 - 2.0466 1.00 2646 140 0.2199 0.2687 REMARK 3 15 2.0466 - 2.0001 1.00 2622 138 0.2437 0.2795 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 1.00 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 4389 REMARK 3 ANGLE : 1.188 5989 REMARK 3 CHIRALITY : 0.081 701 REMARK 3 PLANARITY : 0.005 765 REMARK 3 DIHEDRAL : 14.442 1672 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1833 THROUGH 1904 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.0122 -4.2422 10.7926 REMARK 3 T TENSOR REMARK 3 T11: 0.2168 T22: 0.2007 REMARK 3 T33: 0.1728 T12: 0.0096 REMARK 3 T13: -0.0048 T23: -0.0041 REMARK 3 L TENSOR REMARK 3 L11: 1.5892 L22: 2.1402 REMARK 3 L33: 1.3716 L12: -1.7907 REMARK 3 L13: 0.4926 L23: -1.2561 REMARK 3 S TENSOR REMARK 3 S11: -0.0088 S12: -0.1489 S13: -0.0226 REMARK 3 S21: 0.1584 S22: 0.0071 S23: 0.0961 REMARK 3 S31: 0.0796 S32: -0.1775 S33: -0.0113 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1905 THROUGH 2026 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.7993 -3.2515 6.0382 REMARK 3 T TENSOR REMARK 3 T11: 0.1792 T22: 0.2065 REMARK 3 T33: 0.2046 T12: -0.0018 REMARK 3 T13: 0.0099 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 1.1817 L22: 2.6865 REMARK 3 L33: 2.0588 L12: -0.5535 REMARK 3 L13: -0.0996 L23: 0.1218 REMARK 3 S TENSOR REMARK 3 S11: 0.0111 S12: 0.0086 S13: -0.0761 REMARK 3 S21: 0.2440 S22: 0.0099 S23: 0.0669 REMARK 3 S31: 0.1143 S32: -0.0164 S33: 0.0077 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2027 THROUGH 2086 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.7265 -14.0886 -9.2966 REMARK 3 T TENSOR REMARK 3 T11: 0.4177 T22: 0.3545 REMARK 3 T33: 0.2914 T12: 0.1109 REMARK 3 T13: -0.0197 T23: -0.0453 REMARK 3 L TENSOR REMARK 3 L11: 2.5224 L22: 4.1162 REMARK 3 L33: 3.0287 L12: -1.9531 REMARK 3 L13: 0.6585 L23: -0.2554 REMARK 3 S TENSOR REMARK 3 S11: 0.2890 S12: 0.1566 S13: -0.3515 REMARK 3 S21: -0.7437 S22: -0.2010 S23: 0.0372 REMARK 3 S31: 0.5306 S32: 0.4271 S33: 0.0293 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1833 THROUGH 1844 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.6654 -34.7651 10.8777 REMARK 3 T TENSOR REMARK 3 T11: 0.4599 T22: 0.4689 REMARK 3 T33: 0.4670 T12: -0.0853 REMARK 3 T13: 0.0892 T23: -0.1051 REMARK 3 L TENSOR REMARK 3 L11: 2.5015 L22: 1.1014 REMARK 3 L33: 0.2487 L12: 0.5221 REMARK 3 L13: -0.0503 L23: 0.4894 REMARK 3 S TENSOR REMARK 3 S11: -0.4100 S12: 0.7863 S13: -0.7917 REMARK 3 S21: -1.3920 S22: -0.1762 S23: 0.5203 REMARK 3 S31: 0.3132 S32: -0.5591 S33: -0.0399 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1845 THROUGH 1864 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.0957 -26.6406 25.3422 REMARK 3 T TENSOR REMARK 3 T11: 0.2247 T22: 0.3012 REMARK 3 T33: 0.2131 T12: -0.0221 REMARK 3 T13: 0.0215 T23: 0.0391 REMARK 3 L TENSOR REMARK 3 L11: 1.0419 L22: 2.1260 REMARK 3 L33: 1.9526 L12: -0.1760 REMARK 3 L13: -0.4905 L23: -0.1375 REMARK 3 S TENSOR REMARK 3 S11: 0.1332 S12: -0.0668 S13: 0.0355 REMARK 3 S21: -0.0789 S22: -0.1983 S23: 0.0229 REMARK 3 S31: -0.3778 S32: 0.4258 S33: -0.0361 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1865 THROUGH 1904 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.3735 -22.1399 33.4567 REMARK 3 T TENSOR REMARK 3 T11: 0.2984 T22: 0.2546 REMARK 3 T33: 0.2854 T12: 0.0240 REMARK 3 T13: 0.0695 T23: 0.0171 REMARK 3 L TENSOR REMARK 3 L11: 1.1463 L22: 2.1059 REMARK 3 L33: 0.9338 L12: 0.6798 REMARK 3 L13: -0.4927 L23: -0.4876 REMARK 3 S TENSOR REMARK 3 S11: 0.0840 S12: -0.0925 S13: 0.1492 REMARK 3 S21: 0.3483 S22: -0.0472 S23: 0.3894 REMARK 3 S31: -0.3150 S32: -0.0071 S33: -0.0576 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1905 THROUGH 1923 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.1637 -20.8562 22.5842 REMARK 3 T TENSOR REMARK 3 T11: 0.3312 T22: 0.3336 REMARK 3 T33: 0.3661 T12: 0.0043 REMARK 3 T13: -0.0544 T23: 0.0286 REMARK 3 L TENSOR REMARK 3 L11: 2.3026 L22: 2.5029 REMARK 3 L33: 3.2395 L12: 1.8197 REMARK 3 L13: -2.6053 L23: -2.3133 REMARK 3 S TENSOR REMARK 3 S11: 0.0528 S12: 0.2048 S13: 0.1294 REMARK 3 S21: 0.2152 S22: 0.1926 S23: 0.6395 REMARK 3 S31: -0.1668 S32: -0.4510 S33: -0.1215 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1924 THROUGH 1947 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.9712 -23.2863 14.7137 REMARK 3 T TENSOR REMARK 3 T11: 0.3640 T22: 0.3028 REMARK 3 T33: 0.2634 T12: -0.0596 REMARK 3 T13: -0.0631 T23: 0.0348 REMARK 3 L TENSOR REMARK 3 L11: 1.0654 L22: 2.5439 REMARK 3 L33: 1.7222 L12: -0.3204 REMARK 3 L13: -0.8566 L23: -0.5176 REMARK 3 S TENSOR REMARK 3 S11: -0.2226 S12: 0.2946 S13: -0.0504 REMARK 3 S21: -0.8649 S22: 0.1544 S23: 0.1428 REMARK 3 S31: 0.3320 S32: -0.0731 S33: -0.0047 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1948 THROUGH 1964 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.1609 -28.5095 13.1025 REMARK 3 T TENSOR REMARK 3 T11: 0.4709 T22: 0.3071 REMARK 3 T33: 0.2957 T12: -0.0844 REMARK 3 T13: -0.0679 T23: 0.0310 REMARK 3 L TENSOR REMARK 3 L11: 2.1981 L22: 1.8238 REMARK 3 L33: 1.4115 L12: -0.4603 REMARK 3 L13: 0.3286 L23: 0.0806 REMARK 3 S TENSOR REMARK 3 S11: -0.2412 S12: -0.1800 S13: -0.0838 REMARK 3 S21: -0.5843 S22: 0.3441 S23: 0.1843 REMARK 3 S31: 0.0473 S32: -0.1952 S33: -0.0411 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1965 THROUGH 2000 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.3631 -19.7638 30.4494 REMARK 3 T TENSOR REMARK 3 T11: 0.2806 T22: 0.2663 REMARK 3 T33: 0.2706 T12: -0.0235 REMARK 3 T13: 0.0300 T23: 0.0151 REMARK 3 L TENSOR REMARK 3 L11: 1.8400 L22: 2.0979 REMARK 3 L33: 0.4206 L12: 0.4685 REMARK 3 L13: -0.2670 L23: -0.2361 REMARK 3 S TENSOR REMARK 3 S11: 0.1730 S12: -0.3749 S13: 0.2227 REMARK 3 S21: 0.2841 S22: -0.0682 S23: -0.1782 REMARK 3 S31: -0.2795 S32: 0.2528 S33: -0.0276 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2001 THROUGH 2044 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.3514 -28.2483 31.5026 REMARK 3 T TENSOR REMARK 3 T11: 0.1261 T22: 0.2608 REMARK 3 T33: 0.1876 T12: 0.0054 REMARK 3 T13: -0.0293 T23: 0.0484 REMARK 3 L TENSOR REMARK 3 L11: 2.1931 L22: 2.4902 REMARK 3 L33: 1.4700 L12: 0.0416 REMARK 3 L13: 0.6649 L23: 0.4597 REMARK 3 S TENSOR REMARK 3 S11: -0.0313 S12: -0.5136 S13: -0.0875 REMARK 3 S21: 0.2688 S22: 0.0583 S23: -0.4892 REMARK 3 S31: -0.0752 S32: 0.0221 S33: 0.0026 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2045 THROUGH 2067 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.1730 -38.4106 30.7505 REMARK 3 T TENSOR REMARK 3 T11: 0.3532 T22: 0.3882 REMARK 3 T33: 0.5121 T12: 0.0604 REMARK 3 T13: 0.0284 T23: 0.0733 REMARK 3 L TENSOR REMARK 3 L11: 2.5738 L22: 4.7987 REMARK 3 L33: 1.3941 L12: 1.9026 REMARK 3 L13: 0.0144 L23: 0.0099 REMARK 3 S TENSOR REMARK 3 S11: 0.0356 S12: -0.4048 S13: -0.3205 REMARK 3 S21: 0.3775 S22: -0.1249 S23: -0.8823 REMARK 3 S31: 0.3931 S32: 0.3268 S33: 0.0433 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2068 THROUGH 2086 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.8487 -48.7356 24.3155 REMARK 3 T TENSOR REMARK 3 T11: 0.6769 T22: 0.5231 REMARK 3 T33: 0.7204 T12: 0.0820 REMARK 3 T13: 0.0872 T23: 0.0460 REMARK 3 L TENSOR REMARK 3 L11: 1.1442 L22: 2.2077 REMARK 3 L33: 1.1537 L12: -0.7921 REMARK 3 L13: 0.3106 L23: -0.8962 REMARK 3 S TENSOR REMARK 3 S11: -0.2625 S12: 0.7018 S13: -0.2126 REMARK 3 S21: -0.4866 S22: -0.0406 S23: -0.9526 REMARK 3 S31: 1.1006 S32: 0.1969 S33: 0.0603 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ILJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000076903. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : SI-111 CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42335 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.600 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : 0.05000 REMARK 200 FOR THE DATA SET : 17.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.67000 REMARK 200 R SYM FOR SHELL (I) : 0.57000 REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3EO9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-CL PH 8.5, 12% PEG 3350, REMARK 280 100 MM NACL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.80000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.97750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.51100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.97750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.80000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.51100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 2087 REMARK 465 ILE A 2088 REMARK 465 LYS A 2089 REMARK 465 ALA A 2090 REMARK 465 ASN B 2087 REMARK 465 ILE B 2088 REMARK 465 LYS B 2089 REMARK 465 ALA B 2090 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 1927 OE2 REMARK 480 LEU B 1941 N CA C O CB CG CD1 REMARK 480 LEU B 1941 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 2225 O HOH B 2289 1.93 REMARK 500 O LEU A 1961 O HOH A 2184 2.09 REMARK 500 O HOH A 2145 O HOH A 2206 2.13 REMARK 500 O HOH B 2278 O HOH B 2294 2.15 REMARK 500 OE1 GLU B 1960 O HOH B 2199 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2188 O HOH B 2192 4445 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A1964 37.15 -89.27 REMARK 500 ASP A1993 -127.17 48.82 REMARK 500 ASP B1993 -122.54 50.24 REMARK 500 ASN B2018 87.50 -154.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ILG RELATED DB: PDB REMARK 900 RELATED ID: 4ILH RELATED DB: PDB REMARK 900 RELATED ID: 4ILI RELATED DB: PDB DBREF 4ILJ A 1836 2090 UNP P33334 PRP8_YEAST 1836 2090 DBREF 4ILJ B 1836 2090 UNP P33334 PRP8_YEAST 1836 2090 SEQADV 4ILJ GLY A 1833 UNP P33334 EXPRESSION TAG SEQADV 4ILJ ALA A 1834 UNP P33334 EXPRESSION TAG SEQADV 4ILJ MET A 1835 UNP P33334 EXPRESSION TAG SEQADV 4ILJ ALA A 1911 UNP P33334 TRP 1911 ENGINEERED MUTATION SEQADV 4ILJ GLY B 1833 UNP P33334 EXPRESSION TAG SEQADV 4ILJ ALA B 1834 UNP P33334 EXPRESSION TAG SEQADV 4ILJ MET B 1835 UNP P33334 EXPRESSION TAG SEQADV 4ILJ ALA B 1911 UNP P33334 TRP 1911 ENGINEERED MUTATION SEQRES 1 A 258 GLY ALA MET ASN SER SER ASN TYR ALA GLU LEU PHE ASN SEQRES 2 A 258 ASN ASP ILE LYS LEU PHE VAL ASP ASP THR ASN VAL TYR SEQRES 3 A 258 ARG VAL THR VAL HIS LYS THR PHE GLU GLY ASN VAL ALA SEQRES 4 A 258 THR LYS ALA ILE ASN GLY CYS ILE PHE THR LEU ASN PRO SEQRES 5 A 258 LYS THR GLY HIS LEU PHE LEU LYS ILE ILE HIS THR SER SEQRES 6 A 258 VAL TRP ALA GLY GLN LYS ARG LEU SER GLN LEU ALA LYS SEQRES 7 A 258 ALA LYS THR ALA GLU GLU VAL SER ALA LEU VAL ARG SER SEQRES 8 A 258 LEU PRO LYS GLU GLU GLN PRO LYS GLN ILE ILE VAL THR SEQRES 9 A 258 ARG LYS ALA MET LEU ASP PRO LEU GLU VAL HIS MET LEU SEQRES 10 A 258 ASP PHE PRO ASN ILE ALA ILE ARG PRO THR GLU LEU ARG SEQRES 11 A 258 LEU PRO PHE SER ALA ALA MET SER ILE ASP LYS LEU SER SEQRES 12 A 258 ASP VAL VAL MET LYS ALA THR GLU PRO GLN MET VAL LEU SEQRES 13 A 258 PHE ASN ILE TYR ASP ASP TRP LEU ASP ARG ILE SER SER SEQRES 14 A 258 TYR THR ALA PHE SER ARG LEU THR LEU LEU LEU ARG ALA SEQRES 15 A 258 LEU LYS THR ASN GLU GLU SER ALA LYS MET ILE LEU LEU SEQRES 16 A 258 SER ASP PRO THR ILE THR ILE LYS SER TYR HIS LEU TRP SEQRES 17 A 258 PRO SER PHE THR ASP GLU GLN TRP ILE THR ILE GLU SER SEQRES 18 A 258 GLN MET ARG ASP LEU ILE LEU THR GLU TYR GLY ARG LYS SEQRES 19 A 258 TYR ASN VAL ASN ILE SER ALA LEU THR GLN THR GLU ILE SEQRES 20 A 258 LYS ASP ILE ILE LEU GLY GLN ASN ILE LYS ALA SEQRES 1 B 258 GLY ALA MET ASN SER SER ASN TYR ALA GLU LEU PHE ASN SEQRES 2 B 258 ASN ASP ILE LYS LEU PHE VAL ASP ASP THR ASN VAL TYR SEQRES 3 B 258 ARG VAL THR VAL HIS LYS THR PHE GLU GLY ASN VAL ALA SEQRES 4 B 258 THR LYS ALA ILE ASN GLY CYS ILE PHE THR LEU ASN PRO SEQRES 5 B 258 LYS THR GLY HIS LEU PHE LEU LYS ILE ILE HIS THR SER SEQRES 6 B 258 VAL TRP ALA GLY GLN LYS ARG LEU SER GLN LEU ALA LYS SEQRES 7 B 258 ALA LYS THR ALA GLU GLU VAL SER ALA LEU VAL ARG SER SEQRES 8 B 258 LEU PRO LYS GLU GLU GLN PRO LYS GLN ILE ILE VAL THR SEQRES 9 B 258 ARG LYS ALA MET LEU ASP PRO LEU GLU VAL HIS MET LEU SEQRES 10 B 258 ASP PHE PRO ASN ILE ALA ILE ARG PRO THR GLU LEU ARG SEQRES 11 B 258 LEU PRO PHE SER ALA ALA MET SER ILE ASP LYS LEU SER SEQRES 12 B 258 ASP VAL VAL MET LYS ALA THR GLU PRO GLN MET VAL LEU SEQRES 13 B 258 PHE ASN ILE TYR ASP ASP TRP LEU ASP ARG ILE SER SER SEQRES 14 B 258 TYR THR ALA PHE SER ARG LEU THR LEU LEU LEU ARG ALA SEQRES 15 B 258 LEU LYS THR ASN GLU GLU SER ALA LYS MET ILE LEU LEU SEQRES 16 B 258 SER ASP PRO THR ILE THR ILE LYS SER TYR HIS LEU TRP SEQRES 17 B 258 PRO SER PHE THR ASP GLU GLN TRP ILE THR ILE GLU SER SEQRES 18 B 258 GLN MET ARG ASP LEU ILE LEU THR GLU TYR GLY ARG LYS SEQRES 19 B 258 TYR ASN VAL ASN ILE SER ALA LEU THR GLN THR GLU ILE SEQRES 20 B 258 LYS ASP ILE ILE LEU GLY GLN ASN ILE LYS ALA FORMUL 3 HOH *366(H2 O) HELIX 1 1 ASN A 1839 ASN A 1845 5 7 HELIX 2 2 HIS A 1895 TRP A 1899 5 5 HELIX 3 3 ARG A 1904 LEU A 1924 1 21 HELIX 4 4 PRO A 1925 GLN A 1929 5 5 HELIX 5 5 ARG A 1937 ALA A 1939 5 3 HELIX 6 6 MET A 1940 MET A 1948 1 9 HELIX 7 7 PRO A 1964 SER A 1970 5 7 HELIX 8 8 ILE A 1971 ALA A 1981 1 11 HELIX 9 9 ASP A 1994 ARG A 1998 5 5 HELIX 10 10 SER A 2000 ASN A 2018 1 19 HELIX 11 11 ASN A 2018 LEU A 2027 1 10 HELIX 12 12 THR A 2044 ASN A 2068 1 25 HELIX 13 13 ASN A 2070 LEU A 2074 5 5 HELIX 14 14 THR A 2075 GLY A 2085 1 11 HELIX 15 15 ASN B 1839 ASN B 1845 5 7 HELIX 16 16 HIS B 1895 ALA B 1900 5 6 HELIX 17 17 ARG B 1904 LEU B 1924 1 21 HELIX 18 18 ARG B 1937 ALA B 1939 5 3 HELIX 19 19 MET B 1940 MET B 1948 1 9 HELIX 20 20 PRO B 1964 SER B 1970 5 7 HELIX 21 21 ILE B 1971 ALA B 1981 1 11 HELIX 22 22 ASP B 1994 ARG B 1998 5 5 HELIX 23 23 SER B 2000 ASN B 2018 1 19 HELIX 24 24 ASN B 2018 SER B 2028 1 11 HELIX 25 25 THR B 2044 ASN B 2068 1 25 HELIX 26 26 ASN B 2070 LEU B 2074 5 5 HELIX 27 27 THR B 2075 GLY B 2085 1 11 SHEET 1 A 6 ALA A1955 ARG A1957 0 SHEET 2 A 6 GLN A1932 VAL A1935 1 N ILE A1933 O ALA A1955 SHEET 3 A 6 LYS A1849 ASP A1853 1 N LEU A1850 O ILE A1934 SHEET 4 A 6 GLY A1877 LEU A1882 -1 O PHE A1880 N ASP A1853 SHEET 5 A 6 HIS A1888 ILE A1894 -1 O PHE A1890 N THR A1881 SHEET 6 A 6 GLN A1985 ASN A1990 -1 O PHE A1989 N LEU A1889 SHEET 1 B 2 ARG A1859 LYS A1864 0 SHEET 2 B 2 VAL A1870 ILE A1875 -1 O ALA A1871 N HIS A1863 SHEET 1 C 6 ALA B1955 ARG B1957 0 SHEET 2 C 6 GLN B1932 VAL B1935 1 N ILE B1933 O ARG B1957 SHEET 3 C 6 LYS B1849 ASP B1853 1 N LEU B1850 O ILE B1934 SHEET 4 C 6 GLY B1877 LEU B1882 -1 O LEU B1882 N PHE B1851 SHEET 5 C 6 HIS B1888 ILE B1894 -1 O PHE B1890 N THR B1881 SHEET 6 C 6 GLN B1985 ASN B1990 -1 O PHE B1989 N LEU B1889 SHEET 1 D 2 ARG B1859 LYS B1864 0 SHEET 2 D 2 VAL B1870 ILE B1875 -1 O ALA B1871 N HIS B1863 CISPEP 1 ASP A 2029 PRO A 2030 0 -15.77 CRYST1 75.600 85.022 95.955 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013228 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011762 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010422 0.00000