HEADER TRANSPORT PROTEIN 05-JAN-13 4INN TITLE PROTEIN HP1028 FROM THE HUMAN PATHOGEN HELICOBACTER PYLORI BELONGS TO TITLE 2 THE LIPOCALIN FAMILY COMPND MOL_ID: 1; COMPND 2 MOLECULE: HP1028; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 17-161; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI; SOURCE 3 ORGANISM_TAXID: 102618; SOURCE 4 STRAIN: CCUG17874; SOURCE 5 GENE: HP1028, HP17_02362; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET151-HP1028 KEYWDS BETA-BARREL, LIPOCALINS FOLD, BINDING PROTEIN, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.BARISON,L.CENDRON,V.LOCONTE,G.ZANOTTI REVDAT 2 05-FEB-14 4INN 1 JRNL REVDAT 1 31-JUL-13 4INN 0 JRNL AUTH N.BARISON,L.CENDRON,V.LOCONTE,E.A.PROCTOR,N.V.DOKHOLYAN, JRNL AUTH 2 G.ZANOTTI JRNL TITL PROTEIN HP1028 FROM THE HUMAN PATHOGEN HELICOBACTER PYLORI JRNL TITL 2 BELONGS TO THE LIPOCALIN FAMILY. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 69 1387 2013 JRNL REFN ISSN 0907-4449 JRNL PMID 23897462 JRNL DOI 10.1107/S0907444913008160 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 11069 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 552 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 803 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 REMARK 3 BIN FREE R VALUE SET COUNT : 39 REMARK 3 BIN FREE R VALUE : 0.2720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2421 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 64 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.37000 REMARK 3 B22 (A**2) : 1.73000 REMARK 3 B33 (A**2) : -1.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.784 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.312 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.226 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.303 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.933 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.894 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2499 ; 0.013 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2386 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3338 ; 1.662 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5513 ; 0.889 ; 3.004 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 291 ; 6.827 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 121 ;32.053 ;23.967 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 457 ;19.822 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;22.759 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 335 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2766 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 606 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 16 A 161 5 REMARK 3 1 B 16 B 161 5 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 860 ; 0.300 ; 0.500 REMARK 3 LOOSE POSITIONAL 1 A (A): 1516 ; 0.670 ; 5.000 REMARK 3 MEDIUM THERMAL 1 A (A**2): 860 ; 4.010 ; 2.000 REMARK 3 LOOSE THERMAL 1 A (A**2): 1516 ; 5.240 ;10.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4INN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JAN-13. REMARK 100 THE RCSB ID CODE IS RCSB076979. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : CHANNEL CUT SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11665 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.710 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.400 REMARK 200 R MERGE (I) : 0.10800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 13.90 REMARK 200 R MERGE FOR SHELL (I) : 0.22500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 9.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE, 0.1 M TRIS-HCL, REMARK 280 30% PEG4000, PH 8.5, VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 17.12000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.83500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.57500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.83500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 17.12000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.57500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 GLY A -9 REMARK 465 LYS A -8 REMARK 465 PRO A -7 REMARK 465 ILE A -6 REMARK 465 PRO A -5 REMARK 465 ASN A -4 REMARK 465 PRO A -3 REMARK 465 LEU A -2 REMARK 465 LEU A -1 REMARK 465 GLY A 0 REMARK 465 LEU A 1 REMARK 465 ASP A 2 REMARK 465 SER A 3 REMARK 465 THR A 4 REMARK 465 GLU A 5 REMARK 465 ASN A 6 REMARK 465 LEU A 7 REMARK 465 TYR A 8 REMARK 465 PHE A 9 REMARK 465 GLN A 10 REMARK 465 GLY A 11 REMARK 465 ILE A 12 REMARK 465 ASP A 13 REMARK 465 PRO A 14 REMARK 465 PHE A 15 REMARK 465 MSE B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 GLY B -9 REMARK 465 LYS B -8 REMARK 465 PRO B -7 REMARK 465 ILE B -6 REMARK 465 PRO B -5 REMARK 465 ASN B -4 REMARK 465 PRO B -3 REMARK 465 LEU B -2 REMARK 465 LEU B -1 REMARK 465 GLY B 0 REMARK 465 LEU B 1 REMARK 465 ASP B 2 REMARK 465 SER B 3 REMARK 465 THR B 4 REMARK 465 GLU B 5 REMARK 465 ASN B 6 REMARK 465 LEU B 7 REMARK 465 TYR B 8 REMARK 465 PHE B 9 REMARK 465 GLN B 10 REMARK 465 GLY B 11 REMARK 465 ILE B 12 REMARK 465 ASP B 13 REMARK 465 PRO B 14 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR A 123 CA - C - N ANGL. DEV. = 13.7 DEGREES REMARK 500 ASP A 124 C - N - CA ANGL. DEV. = 16.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 29 -127.69 49.88 REMARK 500 ILE A 50 -61.01 -98.91 REMARK 500 ASP A 101 -10.45 -148.77 REMARK 500 ASP A 124 75.85 93.28 REMARK 500 MSE A 129 59.26 -115.27 REMARK 500 LEU B 29 -132.89 47.80 REMARK 500 MSE B 129 75.73 -106.52 REMARK 500 ILE B 160 70.48 -68.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 TYR A 123 23.0 L L OUTSIDE RANGE REMARK 500 THR A 134 24.7 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P33 A 201 DBREF 4INN A 17 161 UNP I0ZEL6 I0ZEL6_HELPX 17 161 DBREF 4INN B 17 161 UNP I0ZEL6 I0ZEL6_HELPX 17 161 SEQADV 4INN MSE A -16 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN HIS A -15 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN HIS A -14 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN HIS A -13 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN HIS A -12 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN HIS A -11 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN HIS A -10 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN GLY A -9 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN LYS A -8 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN PRO A -7 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN ILE A -6 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN PRO A -5 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN ASN A -4 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN PRO A -3 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN LEU A -2 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN LEU A -1 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN GLY A 0 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN LEU A 1 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN ASP A 2 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN SER A 3 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN THR A 4 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN GLU A 5 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN ASN A 6 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN LEU A 7 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN TYR A 8 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN PHE A 9 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN GLN A 10 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN GLY A 11 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN ILE A 12 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN ASP A 13 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN PRO A 14 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN PHE A 15 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN THR A 16 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN MSE A 129 UNP I0ZEL6 LEU 129 ENGINEERED MUTATION SEQADV 4INN MSE B -16 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN HIS B -15 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN HIS B -14 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN HIS B -13 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN HIS B -12 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN HIS B -11 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN HIS B -10 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN GLY B -9 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN LYS B -8 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN PRO B -7 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN ILE B -6 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN PRO B -5 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN ASN B -4 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN PRO B -3 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN LEU B -2 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN LEU B -1 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN GLY B 0 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN LEU B 1 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN ASP B 2 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN SER B 3 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN THR B 4 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN GLU B 5 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN ASN B 6 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN LEU B 7 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN TYR B 8 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN PHE B 9 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN GLN B 10 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN GLY B 11 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN ILE B 12 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN ASP B 13 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN PRO B 14 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN PHE B 15 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN THR B 16 UNP I0ZEL6 EXPRESSION TAG SEQADV 4INN MSE B 129 UNP I0ZEL6 LEU 129 ENGINEERED MUTATION SEQRES 1 A 178 MSE HIS HIS HIS HIS HIS HIS GLY LYS PRO ILE PRO ASN SEQRES 2 A 178 PRO LEU LEU GLY LEU ASP SER THR GLU ASN LEU TYR PHE SEQRES 3 A 178 GLN GLY ILE ASP PRO PHE THR VAL GLU LEU PRO GLY ILE SEQRES 4 A 178 TYR GLN THR GLN GLU PHE LEU TYR MSE LYS SER SER PHE SEQRES 5 A 178 VAL GLU PHE PHE GLU HIS ASN GLY LYS PHE TYR ALA TYR SEQRES 6 A 178 GLY ILE SER ASP VAL ASP GLY SER LYS ALA LYS LYS ASP SEQRES 7 A 178 LYS LEU ASN PRO ASN PRO LYS LEU ARG ASN ARG SER ASP SEQRES 8 A 178 LYS GLY VAL VAL PHE LEU SER ASP LEU ILE LYS VAL GLY SEQRES 9 A 178 LYS ARG SER TYR LYS GLY GLY LYS ALA TYR ASN PHE TYR SEQRES 10 A 178 ASP GLY LYS THR TYR TYR VAL ARG VAL ALA GLN ASN SER SEQRES 11 A 178 ASN GLY ASP LEU GLU PHE THR SER SER TYR ASP LYS TRP SEQRES 12 A 178 GLY TYR MSE GLY LYS THR PHE THR TRP LYS ARG LEU SER SEQRES 13 A 178 ASP GLU GLU ILE LYS ASN LEU LYS LEU LYS ARG PHE ASN SEQRES 14 A 178 LEU ASP GLU VAL LEU LYS THR ILE LYS SEQRES 1 B 178 MSE HIS HIS HIS HIS HIS HIS GLY LYS PRO ILE PRO ASN SEQRES 2 B 178 PRO LEU LEU GLY LEU ASP SER THR GLU ASN LEU TYR PHE SEQRES 3 B 178 GLN GLY ILE ASP PRO PHE THR VAL GLU LEU PRO GLY ILE SEQRES 4 B 178 TYR GLN THR GLN GLU PHE LEU TYR MSE LYS SER SER PHE SEQRES 5 B 178 VAL GLU PHE PHE GLU HIS ASN GLY LYS PHE TYR ALA TYR SEQRES 6 B 178 GLY ILE SER ASP VAL ASP GLY SER LYS ALA LYS LYS ASP SEQRES 7 B 178 LYS LEU ASN PRO ASN PRO LYS LEU ARG ASN ARG SER ASP SEQRES 8 B 178 LYS GLY VAL VAL PHE LEU SER ASP LEU ILE LYS VAL GLY SEQRES 9 B 178 LYS ARG SER TYR LYS GLY GLY LYS ALA TYR ASN PHE TYR SEQRES 10 B 178 ASP GLY LYS THR TYR TYR VAL ARG VAL ALA GLN ASN SER SEQRES 11 B 178 ASN GLY ASP LEU GLU PHE THR SER SER TYR ASP LYS TRP SEQRES 12 B 178 GLY TYR MSE GLY LYS THR PHE THR TRP LYS ARG LEU SER SEQRES 13 B 178 ASP GLU GLU ILE LYS ASN LEU LYS LEU LYS ARG PHE ASN SEQRES 14 B 178 LEU ASP GLU VAL LEU LYS THR ILE LYS MODRES 4INN MSE A 31 MET SELENOMETHIONINE MODRES 4INN MSE A 129 MET SELENOMETHIONINE MODRES 4INN MSE B 31 MET SELENOMETHIONINE MODRES 4INN MSE B 129 MET SELENOMETHIONINE HET MSE A 31 8 HET MSE A 129 8 HET MSE B 31 8 HET MSE B 129 8 HET P33 A 201 22 HETNAM MSE SELENOMETHIONINE HETNAM P33 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL HETSYN P33 HEPTAETHYLENE GLYCOL, PEG330 FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 P33 C14 H30 O8 FORMUL 4 HOH *64(H2 O) HELIX 1 1 ASN A 66 ARG A 70 5 5 HELIX 2 2 SER A 139 LEU A 146 1 8 HELIX 3 3 ASN A 152 LYS A 158 1 7 HELIX 4 4 ASN B 66 ARG B 70 5 5 HELIX 5 5 SER B 139 LYS B 147 1 9 HELIX 6 6 ASN B 152 LYS B 158 1 7 SHEET 1 A 9 GLY A 21 GLN A 24 0 SHEET 2 A 9 SER A 34 HIS A 41 -1 O VAL A 36 N TYR A 23 SHEET 3 A 9 LYS A 44 ASP A 52 -1 O SER A 51 N PHE A 35 SHEET 4 A 9 VAL A 78 GLY A 87 -1 O LEU A 83 N PHE A 45 SHEET 5 A 9 SER A 90 TYR A 97 -1 O TYR A 97 N PHE A 79 SHEET 6 A 9 THR A 104 GLN A 111 -1 O TYR A 105 N ALA A 96 SHEET 7 A 9 LEU A 117 SER A 122 -1 O GLU A 118 N ALA A 110 SHEET 8 A 9 GLY A 130 ARG A 137 -1 O TRP A 135 N LEU A 117 SHEET 9 A 9 GLY A 21 GLN A 24 -1 N GLN A 24 O LYS A 136 SHEET 1 B 9 GLY B 21 GLN B 24 0 SHEET 2 B 9 SER B 34 HIS B 41 -1 O VAL B 36 N TYR B 23 SHEET 3 B 9 LYS B 44 ASP B 52 -1 O LYS B 44 N HIS B 41 SHEET 4 B 9 VAL B 78 GLY B 87 -1 O LEU B 83 N PHE B 45 SHEET 5 B 9 SER B 90 TYR B 97 -1 O LYS B 92 N ILE B 84 SHEET 6 B 9 THR B 104 GLN B 111 -1 O VAL B 107 N GLY B 94 SHEET 7 B 9 LEU B 117 SER B 122 -1 O THR B 120 N ARG B 108 SHEET 8 B 9 GLY B 130 ARG B 137 -1 O PHE B 133 N PHE B 119 SHEET 9 B 9 GLY B 21 GLN B 24 -1 N GLN B 24 O LYS B 136 LINK C TYR A 30 N MSE A 31 1555 1555 1.33 LINK C MSE A 31 N LYS A 32 1555 1555 1.32 LINK C TYR A 128 N MSE A 129 1555 1555 1.33 LINK C MSE A 129 N GLY A 130 1555 1555 1.33 LINK C TYR B 30 N MSE B 31 1555 1555 1.32 LINK C MSE B 31 N LYS B 32 1555 1555 1.32 LINK C TYR B 128 N MSE B 129 1555 1555 1.32 LINK C MSE B 129 N GLY B 130 1555 1555 1.32 CISPEP 1 TYR A 123 ASP A 124 0 18.08 SITE 1 AC1 10 TYR A 105 SER A 121 TYR A 123 MSE A 129 SITE 2 AC1 10 GLY A 130 TYR B 105 SER B 121 TYR B 123 SITE 3 AC1 10 MSE B 129 GLY B 130 CRYST1 34.240 79.150 131.670 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.029206 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012634 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007595 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 0.999918 -0.009497 0.008557 -2.13325 1 MTRIX2 2 -0.010517 -0.991672 0.128357 -9.68252 1 MTRIX3 2 0.007266 -0.128436 -0.991691 222.30487 1