data_4IQS # _entry.id 4IQS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4IQS pdb_00004iqs 10.2210/pdb4iqs/pdb NDB NA2193 ? ? RCSB RCSB077091 ? ? WWPDB D_1000077091 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-12-25 2 'Structure model' 1 1 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_conn.pdbx_dist_value' 4 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 6 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 7 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 8 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 9 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 10 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 11 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 12 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 13 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 14 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 15 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 16 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4IQS _pdbx_database_status.recvd_initial_deposition_date 2013-01-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sheng, J.' 1 'Gan, J.' 2 'Soares, A.' 3 'Huang, Z.' 4 # _citation.id primary _citation.title 'Structural insights of non-canonical U*U pair and Hoogsteen interaction probed with Se atom.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 41 _citation.page_first 10476 _citation.page_last 10487 _citation.year 2013 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24013566 _citation.pdbx_database_id_DOI 10.1093/nar/gkt799 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sheng, J.' 1 ? primary 'Gan, J.' 2 ? primary 'Soares, A.S.' 3 ? primary 'Salon, J.' 4 ? primary 'Huang, Z.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description ;RNA (5'-R(*GP*UP*GP*(S5)P*AP*CP*AP*C)-3') ; _entity.formula_weight 2589.522 _entity.pdbx_number_of_molecules 6 _entity.pdbx_ec ? _entity.pdbx_mutation '4-Selenium Uridine' _entity.pdbx_fragment US5 _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'GUG(US5)ACAC' _entity_poly.pdbx_seq_one_letter_code_can GUGUACAC _entity_poly.pdbx_strand_id A,B,C,D,E,F _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 U n 1 3 G n 1 4 US5 n 1 5 A n 1 6 C n 1 7 A n 1 8 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Synthesized by solid phase synthesizer and purified by HPLC' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 US5 'RNA linking' n '1-(5-O-phosphono-beta-D-ribofuranosyl)-4-selanylpyrimidin-2(1H)-one' "4-Se-ribouridine-5'-phosphate" 'C9 H13 N2 O8 P Se' 387.142 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 U 2 2 2 U U A . n A 1 3 G 3 3 3 G G A . n A 1 4 US5 4 4 4 US5 SEU A . n A 1 5 A 5 5 5 A A A . n A 1 6 C 6 6 6 C C A . n A 1 7 A 7 7 7 A A A . n A 1 8 C 8 8 8 C C A . n B 1 1 G 1 1 1 G G B . n B 1 2 U 2 2 2 U U B . n B 1 3 G 3 3 3 G G B . n B 1 4 US5 4 4 4 US5 SEU B . n B 1 5 A 5 5 5 A A B . n B 1 6 C 6 6 6 C C B . n B 1 7 A 7 7 7 A A B . n B 1 8 C 8 8 8 C C B . n C 1 1 G 1 1 1 G G C . n C 1 2 U 2 2 2 U U C . n C 1 3 G 3 3 3 G G C . n C 1 4 US5 4 4 4 US5 SEU C . n C 1 5 A 5 5 5 A A C . n C 1 6 C 6 6 6 C C C . n C 1 7 A 7 7 7 A A C . n C 1 8 C 8 8 8 C C C . n D 1 1 G 1 1 1 G G D . n D 1 2 U 2 2 2 U U D . n D 1 3 G 3 3 3 G G D . n D 1 4 US5 4 4 4 US5 SEU D . n D 1 5 A 5 5 5 A A D . n D 1 6 C 6 6 6 C C D . n D 1 7 A 7 7 7 A A D . n D 1 8 C 8 8 8 C C D . n E 1 1 G 1 1 1 G G E . n E 1 2 U 2 2 2 U U E . n E 1 3 G 3 3 3 G G E . n E 1 4 US5 4 4 4 US5 SEU E . n E 1 5 A 5 5 5 A A E . n E 1 6 C 6 6 6 C C E . n E 1 7 A 7 7 7 A A E . n E 1 8 C 8 8 8 C C E . n F 1 1 G 1 1 1 G G F . n F 1 2 U 2 2 2 U U F . n F 1 3 G 3 3 3 G G F . n F 1 4 US5 4 4 4 US5 SEU F . n F 1 5 A 5 5 5 A A F . n F 1 6 C 6 6 6 C C F . n F 1 7 A 7 7 7 A A F . n F 1 8 C 8 8 8 C C F . n # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 SHELXS phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 4IQS _cell.length_a 47.006 _cell.length_b 47.006 _cell.length_c 354.105 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 108 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4IQS _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4IQS _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.42 _exptl_crystal.density_percent_sol 49.23 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;10% MPD, 40 mM Na Cacodylate pH 6.0, 12 mM Spermine tetra-HCl, 12 mM NaCl/80 mM KCl, VAPOR DIFFUSION, HANGING DROP, temperature 298K ; # _diffrn.id 1 _diffrn.ambient_temp 99 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2009 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X12B' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X12B _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9795 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4IQS _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.6 _reflns.number_obs 7113 _reflns.number_all 8915 _reflns.percent_possible_obs 80 _reflns.pdbx_Rmerge_I_obs 0.053 _reflns.pdbx_Rsym_value 0.084 _reflns.pdbx_netI_over_sigmaI 35.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 10 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.6 _reflns_shell.d_res_low 2.69 _reflns_shell.percent_possible_all 95.8 _reflns_shell.Rmerge_I_obs 0.46 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2 _reflns_shell.pdbx_redundancy 6.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4IQS _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 4776 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 31.73 _refine.ls_d_res_high 2.60 _refine.ls_percent_reflns_obs 99.19 _refine.ls_R_factor_obs 0.19686 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19386 _refine.ls_R_factor_R_free 0.25824 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.6 _refine.ls_number_reflns_R_free 232 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.972 _refine.correlation_coeff_Fo_to_Fc_free 0.957 _refine.B_iso_mean 92.266 _refine.aniso_B[1][1] 0.78 _refine.aniso_B[2][2] 0.78 _refine.aniso_B[3][3] -2.54 _refine.aniso_B[1][2] 0.78 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.587 _refine.pdbx_overall_ESU_R_Free 0.313 _refine.overall_SU_ML 0.267 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 31.263 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1002 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1002 _refine_hist.d_res_high 2.60 _refine_hist.d_res_low 31.73 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.008 0.011 ? 1116 'X-RAY DIFFRACTION' ? r_bond_other_d 0.003 0.020 ? 468 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.846 1.274 ? 1728 'X-RAY DIFFRACTION' ? r_angle_other_deg 3.260 3.000 ? 1134 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.144 0.200 ? 192 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.012 0.020 ? 552 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 234 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.293 0.200 ? 725 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.121 0.200 ? 21 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.149 0.200 ? 59 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.150 0.200 ? 12 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.141 3.000 ? 1583 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 1.936 4.500 ? 1728 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.601 _refine_ls_shell.d_res_low 2.668 _refine_ls_shell.number_reflns_R_work 307 _refine_ls_shell.R_factor_R_work 0.584 _refine_ls_shell.percent_reflns_obs 95.93 _refine_ls_shell.R_factor_R_free 0.502 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 23 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _database_PDB_matrix.entry_id 4IQS _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4IQS _struct.title 'RNA 8mer duplex modified with 4-Se-Uridine' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4IQS _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'Selenium RNA, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4IQS _struct_ref.pdbx_db_accession 4IQS _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4IQS A 1 ? 8 ? 4IQS 1 ? 8 ? 1 8 2 1 4IQS B 1 ? 8 ? 4IQS 1 ? 8 ? 1 8 3 1 4IQS C 1 ? 8 ? 4IQS 1 ? 8 ? 1 8 4 1 4IQS D 1 ? 8 ? 4IQS 1 ? 8 ? 1 8 5 1 4IQS E 1 ? 8 ? 4IQS 1 ? 8 ? 1 8 6 1 4IQS F 1 ? 8 ? 4IQS 1 ? 8 ? 1 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A G 3 "O3'" ? ? ? 1_555 A US5 4 P ? ? A G 3 A US5 4 1_555 ? ? ? ? ? ? ? 1.542 ? ? covale2 covale one ? A US5 4 "O3'" ? ? ? 1_555 A A 5 P ? ? A US5 4 A A 5 1_555 ? ? ? ? ? ? ? 1.596 ? ? covale3 covale both ? B G 3 "O3'" ? ? ? 1_555 B US5 4 P ? ? B G 3 B US5 4 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale4 covale one ? B US5 4 "O3'" ? ? ? 1_555 B A 5 P ? ? B US5 4 B A 5 1_555 ? ? ? ? ? ? ? 1.613 ? ? covale5 covale both ? C G 3 "O3'" ? ? ? 1_555 C US5 4 P ? ? C G 3 C US5 4 1_555 ? ? ? ? ? ? ? 1.577 ? ? covale6 covale one ? C US5 4 "O3'" ? ? ? 1_555 C A 5 P ? ? C US5 4 C A 5 1_555 ? ? ? ? ? ? ? 1.615 ? ? covale7 covale both ? D G 3 "O3'" ? ? ? 1_555 D US5 4 P ? ? D G 3 D US5 4 1_555 ? ? ? ? ? ? ? 1.632 ? ? covale8 covale one ? D US5 4 "O3'" ? ? ? 1_555 D A 5 P ? ? D US5 4 D A 5 1_555 ? ? ? ? ? ? ? 1.614 ? ? covale9 covale both ? E G 3 "O3'" ? ? ? 1_555 E US5 4 P ? ? E G 3 E US5 4 1_555 ? ? ? ? ? ? ? 1.613 ? ? covale10 covale one ? E US5 4 "O3'" ? ? ? 1_555 E A 5 P ? ? E US5 4 E A 5 1_555 ? ? ? ? ? ? ? 1.573 ? ? covale11 covale both ? F G 3 "O3'" ? ? ? 1_555 F US5 4 P ? ? F G 3 F US5 4 1_555 ? ? ? ? ? ? ? 1.643 ? ? covale12 covale one ? F US5 4 "O3'" ? ? ? 1_555 F A 5 P ? ? F US5 4 F A 5 1_555 ? ? ? ? ? ? ? 1.597 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 B C 8 N3 ? ? A G 1 B C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 B C 8 O2 ? ? A G 1 B C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 B C 8 N4 ? ? A G 1 B C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A U 2 N3 ? ? ? 1_555 B A 7 N1 ? ? A U 2 B A 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A U 2 O4 ? ? ? 1_555 B A 7 N6 ? ? A U 2 B A 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 3 N1 ? ? ? 1_555 B C 6 N3 ? ? A G 3 B C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 3 N2 ? ? ? 1_555 B C 6 O2 ? ? A G 3 B C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 3 O6 ? ? ? 1_555 B C 6 N4 ? ? A G 3 B C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A US5 4 N3 ? ? ? 1_555 B A 5 N1 ? ? A US5 4 B A 5 1_555 ? ? ? ? ? ? 'US5-A PAIR' ? ? ? hydrog10 hydrog ? ? A A 5 N1 ? ? ? 1_555 B US5 4 N3 ? ? A A 5 B US5 4 1_555 ? ? ? ? ? ? 'A-US5 PAIR' ? ? ? hydrog11 hydrog ? ? A C 6 N3 ? ? ? 1_555 B G 3 N1 ? ? A C 6 B G 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 6 N4 ? ? ? 1_555 B G 3 O6 ? ? A C 6 B G 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 6 O2 ? ? ? 1_555 B G 3 N2 ? ? A C 6 B G 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A A 7 N1 ? ? ? 1_555 B U 2 N3 ? ? A A 7 B U 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A A 7 N6 ? ? ? 1_555 B U 2 O4 ? ? A A 7 B U 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A C 8 N3 ? ? ? 1_555 B G 1 N1 ? ? A C 8 B G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A C 8 N4 ? ? ? 1_555 B G 1 O6 ? ? A C 8 B G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 8 O2 ? ? ? 1_555 B G 1 N2 ? ? A C 8 B G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C G 1 N1 ? ? ? 1_555 D C 8 N3 ? ? C G 1 D C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C G 1 N2 ? ? ? 1_555 D C 8 O2 ? ? C G 1 D C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C G 1 O6 ? ? ? 1_555 D C 8 N4 ? ? C G 1 D C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C U 2 N3 ? ? ? 1_555 D A 7 N1 ? ? C U 2 D A 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C U 2 O4 ? ? ? 1_555 D A 7 N6 ? ? C U 2 D A 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C G 3 N1 ? ? ? 1_555 D C 6 N3 ? ? C G 3 D C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C G 3 N2 ? ? ? 1_555 D C 6 O2 ? ? C G 3 D C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C G 3 O6 ? ? ? 1_555 D C 6 N4 ? ? C G 3 D C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C US5 4 N3 ? ? ? 1_555 D A 5 N1 ? ? C US5 4 D A 5 1_555 ? ? ? ? ? ? 'US5-A PAIR' ? ? ? hydrog28 hydrog ? ? C A 5 N1 ? ? ? 1_555 D US5 4 N3 ? ? C A 5 D US5 4 1_555 ? ? ? ? ? ? 'A-US5 PAIR' ? ? ? hydrog29 hydrog ? ? C C 6 N3 ? ? ? 1_555 D G 3 N1 ? ? C C 6 D G 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C C 6 N4 ? ? ? 1_555 D G 3 O6 ? ? C C 6 D G 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C C 6 O2 ? ? ? 1_555 D G 3 N2 ? ? C C 6 D G 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C A 7 N1 ? ? ? 1_555 D U 2 N3 ? ? C A 7 D U 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C A 7 N6 ? ? ? 1_555 D U 2 O4 ? ? C A 7 D U 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C C 8 N3 ? ? ? 1_555 D G 1 N1 ? ? C C 8 D G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C C 8 N4 ? ? ? 1_555 D G 1 O6 ? ? C C 8 D G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C C 8 O2 ? ? ? 1_555 D G 1 N2 ? ? C C 8 D G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? F G 1 N1 ? ? ? 1_555 F C 8 N3 ? ? F G 1 F C 8 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? F G 1 N2 ? ? ? 1_555 F C 8 O2 ? ? F G 1 F C 8 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? F G 1 O6 ? ? ? 1_555 F C 8 N4 ? ? F G 1 F C 8 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? F U 2 N3 ? ? ? 1_555 F A 7 N1 ? ? F U 2 F A 7 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? F U 2 O4 ? ? ? 1_555 F A 7 N6 ? ? F U 2 F A 7 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? F G 3 N2 ? ? ? 1_555 F C 6 O2 ? ? F G 3 F C 6 5_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog43 hydrog ? ? F US5 4 N3 ? ? ? 1_555 F A 5 N1 ? ? F US5 4 F A 5 5_555 ? ? ? ? ? ? 'US5-A PAIR' ? ? ? hydrog44 hydrog ? ? F A 5 N1 ? ? ? 1_555 F US5 4 N3 ? ? F A 5 F US5 4 5_555 ? ? ? ? ? ? 'A-US5 PAIR' ? ? ? hydrog45 hydrog ? ? F C 6 O2 ? ? ? 1_555 F G 3 N2 ? ? F C 6 F G 3 5_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog46 hydrog ? ? F A 7 N1 ? ? ? 1_555 F U 2 N3 ? ? F A 7 F U 2 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? F A 7 N6 ? ? ? 1_555 F U 2 O4 ? ? F A 7 F U 2 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? F C 8 N3 ? ? ? 1_555 F G 1 N1 ? ? F C 8 F G 1 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? F C 8 N4 ? ? ? 1_555 F G 1 O6 ? ? F C 8 F G 1 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? F C 8 O2 ? ? ? 1_555 F G 1 N2 ? ? F C 8 F G 1 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 "O3'" _pdbx_validate_symm_contact.auth_asym_id_1 C _pdbx_validate_symm_contact.auth_comp_id_1 C _pdbx_validate_symm_contact.auth_seq_id_1 8 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 "O2'" _pdbx_validate_symm_contact.auth_asym_id_2 F _pdbx_validate_symm_contact.auth_comp_id_2 C _pdbx_validate_symm_contact.auth_seq_id_2 8 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 6_655 _pdbx_validate_symm_contact.dist 2.14 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C5'" C G 1 ? ? "C4'" C G 1 ? ? "O4'" C G 1 ? ? 117.16 109.80 7.36 0.90 N 2 1 "C5'" D G 1 ? ? "C4'" D G 1 ? ? "O4'" D G 1 ? ? 115.30 109.80 5.50 0.90 N 3 1 "O5'" D A 7 ? ? P D A 7 ? ? OP2 D A 7 ? ? 97.22 105.70 -8.48 0.90 N 4 1 "C5'" E G 1 ? ? "C4'" E G 1 ? ? "O4'" E G 1 ? ? 115.86 109.80 6.06 0.90 N # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A US5 4 A US5 4 ? U ? 2 B US5 4 B US5 4 ? U ? 3 C US5 4 C US5 4 ? U ? 4 D US5 4 D US5 4 ? U ? 5 E US5 4 E US5 4 ? U ? 6 F US5 4 F US5 4 ? U ? # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 10.9737 -0.8545 40.2895 0.3919 0.4114 0.3196 0.0309 -0.0719 -0.0612 4.1909 1.1717 1.2204 -0.9329 -1.3549 1.1088 -0.0875 -0.2235 0.0352 0.1774 0.2514 -0.2904 0.0223 0.1292 -0.1638 'X-RAY DIFFRACTION' 2 ? refined 14.4788 -1.4008 36.2137 0.4431 0.6038 0.3629 0.0464 0.0126 -0.1007 1.6731 2.5880 3.6199 0.1754 -1.1623 -2.7878 0.0103 -0.1200 -0.5105 0.2355 0.0441 0.2640 -0.2874 0.1558 -0.0544 'X-RAY DIFFRACTION' 3 ? refined 17.6311 4.3425 17.2266 0.3767 0.3789 0.2670 -0.0270 0.0109 0.0163 0.2377 0.6905 2.0798 0.3550 0.4475 0.2899 0.0336 0.0754 -0.0469 0.0591 0.1256 -0.0521 0.3443 -0.1708 -0.1592 'X-RAY DIFFRACTION' 4 ? refined 18.8799 2.3457 22.2967 0.3619 0.1989 0.2046 -0.1039 -0.0871 0.0822 6.1841 3.8581 4.0774 0.2327 -2.7770 0.5830 -0.0787 -0.0495 -0.0302 -0.1486 0.2295 -0.2009 0.3896 -0.3860 -0.1508 'X-RAY DIFFRACTION' 5 ? refined 13.5990 7.5481 60.8186 0.6975 0.6649 0.2162 0.0159 0.0028 0.0710 9.6452 5.3343 9.2330 1.9986 -8.1180 1.4346 0.2772 -0.7852 0.1181 -0.5880 0.0376 0.1350 -0.8915 0.6231 -0.3148 'X-RAY DIFFRACTION' 6 ? refined 13.8956 -1.8634 -1.7502 0.2936 0.5024 0.4175 0.0610 0.0077 -0.2746 6.2122 12.0155 20.8172 2.1565 4.9090 -7.6875 0.1725 -1.1275 0.2086 0.3602 0.2056 0.9929 0.0429 -1.2197 -0.3781 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 1 ? ? A 8 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 1 ? ? B 8 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 C 1 ? ? C 8 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 D 1 ? ? D 8 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 E 1 ? ? E 8 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 F 1 ? ? F 8 ? ? ? ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 U OP3 O N N 111 U P P N N 112 U OP1 O N N 113 U OP2 O N N 114 U "O5'" O N N 115 U "C5'" C N N 116 U "C4'" C N R 117 U "O4'" O N N 118 U "C3'" C N S 119 U "O3'" O N N 120 U "C2'" C N R 121 U "O2'" O N N 122 U "C1'" C N R 123 U N1 N N N 124 U C2 C N N 125 U O2 O N N 126 U N3 N N N 127 U C4 C N N 128 U O4 O N N 129 U C5 C N N 130 U C6 C N N 131 U HOP3 H N N 132 U HOP2 H N N 133 U "H5'" H N N 134 U "H5''" H N N 135 U "H4'" H N N 136 U "H3'" H N N 137 U "HO3'" H N N 138 U "H2'" H N N 139 U "HO2'" H N N 140 U "H1'" H N N 141 U H3 H N N 142 U H5 H N N 143 U H6 H N N 144 US5 P P N N 145 US5 N1 N N N 146 US5 C2 C N N 147 US5 O2 O N N 148 US5 N3 N N N 149 US5 C4 C N N 150 US5 SE4 SE N N 151 US5 C5 C N N 152 US5 C6 C N N 153 US5 "C1'" C N R 154 US5 OP3 O N N 155 US5 "C2'" C N R 156 US5 "O2'" O N N 157 US5 O2P O N N 158 US5 "C3'" C N S 159 US5 "O3'" O N N 160 US5 "C4'" C N R 161 US5 "O4'" O N N 162 US5 "C5'" C N N 163 US5 "O5'" O N N 164 US5 H5 H N N 165 US5 H6 H N N 166 US5 "H1'" H N N 167 US5 HOP3 H N N 168 US5 "H2'" H N N 169 US5 "HO2'" H N N 170 US5 HO2P H N N 171 US5 "H3'" H N N 172 US5 "HO3'" H N N 173 US5 "H4'" H N N 174 US5 "H5'" H N N 175 US5 "H5'A" H N N 176 US5 HSE4 H N N 177 US5 OP1 O N N 178 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 U OP3 P sing N N 116 U OP3 HOP3 sing N N 117 U P OP1 doub N N 118 U P OP2 sing N N 119 U P "O5'" sing N N 120 U OP2 HOP2 sing N N 121 U "O5'" "C5'" sing N N 122 U "C5'" "C4'" sing N N 123 U "C5'" "H5'" sing N N 124 U "C5'" "H5''" sing N N 125 U "C4'" "O4'" sing N N 126 U "C4'" "C3'" sing N N 127 U "C4'" "H4'" sing N N 128 U "O4'" "C1'" sing N N 129 U "C3'" "O3'" sing N N 130 U "C3'" "C2'" sing N N 131 U "C3'" "H3'" sing N N 132 U "O3'" "HO3'" sing N N 133 U "C2'" "O2'" sing N N 134 U "C2'" "C1'" sing N N 135 U "C2'" "H2'" sing N N 136 U "O2'" "HO2'" sing N N 137 U "C1'" N1 sing N N 138 U "C1'" "H1'" sing N N 139 U N1 C2 sing N N 140 U N1 C6 sing N N 141 U C2 O2 doub N N 142 U C2 N3 sing N N 143 U N3 C4 sing N N 144 U N3 H3 sing N N 145 U C4 O4 doub N N 146 U C4 C5 sing N N 147 U C5 C6 doub N N 148 U C5 H5 sing N N 149 U C6 H6 sing N N 150 US5 P "O5'" sing N N 151 US5 P O2P sing N N 152 US5 N1 C2 sing N N 153 US5 C2 O2 doub N N 154 US5 C2 N3 sing N N 155 US5 C4 N3 doub N N 156 US5 C4 SE4 sing N N 157 US5 SE4 HSE4 sing N N 158 US5 C5 C4 sing N N 159 US5 C5 H5 sing N N 160 US5 C6 N1 sing N N 161 US5 C6 C5 doub N N 162 US5 C6 H6 sing N N 163 US5 "C1'" N1 sing N N 164 US5 "C1'" "H1'" sing N N 165 US5 OP3 P sing N N 166 US5 OP3 HOP3 sing N N 167 US5 "C2'" "C1'" sing N N 168 US5 "C2'" "H2'" sing N N 169 US5 "O2'" "C2'" sing N N 170 US5 "O2'" "HO2'" sing N N 171 US5 O2P HO2P sing N N 172 US5 "C3'" "C2'" sing N N 173 US5 "C3'" "C4'" sing N N 174 US5 "C3'" "H3'" sing N N 175 US5 "O3'" "C3'" sing N N 176 US5 "O3'" "HO3'" sing N N 177 US5 "C4'" "O4'" sing N N 178 US5 "C4'" "H4'" sing N N 179 US5 "O4'" "C1'" sing N N 180 US5 "C5'" "C4'" sing N N 181 US5 "C5'" "O5'" sing N N 182 US5 "C5'" "H5'" sing N N 183 US5 "C5'" "H5'A" sing N N 184 US5 P OP1 doub N N 185 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4IQS 'double helix' 4IQS 'a-form double helix' 4IQS 'internal loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B C 6 1_555 A G 3 1_555 0.019 -0.062 0.178 3.909 -16.319 3.294 1 B_C6:G3_A B 6 ? A 3 ? 19 1 1 B A 7 1_555 A U 2 1_555 -0.214 -0.107 -0.002 6.802 -15.809 2.036 2 B_A7:U2_A B 7 ? A 2 ? 20 1 1 B C 8 1_555 A G 1 1_555 -0.144 -0.289 0.034 5.506 -9.972 -2.936 3 B_C8:G1_A B 8 ? A 1 ? 19 1 1 C G 1 1_555 D C 8 1_555 -0.220 -0.102 0.243 -7.080 -7.956 3.434 4 C_G1:C8_D C 1 ? D 8 ? 19 1 1 C U 2 1_555 D A 7 1_555 -0.400 -0.193 0.052 -5.129 -14.903 -3.524 5 C_U2:A7_D C 2 ? D 7 ? 20 1 1 C G 3 1_555 D C 6 1_555 0.200 -0.137 0.334 -5.068 -10.150 3.341 6 C_G3:C6_D C 3 ? D 6 ? 19 1 1 C US5 4 1_555 D A 5 1_555 0.349 -0.033 0.654 -7.909 -11.655 9.324 7 C_US54:A5_D C 4 ? D 5 ? ? 1 1 C A 5 1_555 D US5 4 1_555 -0.097 0.244 0.843 9.625 -14.485 15.531 8 C_A5:US54_D C 5 ? D 4 ? ? 1 1 C C 6 1_555 D G 3 1_555 -0.098 0.046 0.103 5.610 -17.923 5.678 9 C_C6:G3_D C 6 ? D 3 ? 19 1 1 C A 7 1_555 D U 2 1_555 -0.167 -0.159 -0.278 -4.276 -18.733 6.905 10 C_A7:U2_D C 7 ? D 2 ? 20 1 1 C C 8 1_555 D G 1 1_555 -0.750 -0.260 -0.271 6.799 -5.226 -3.601 11 C_C8:G1_D C 8 ? D 1 ? 19 1 1 A C 6 1_555 B G 3 1_555 0.038 -0.114 0.112 5.884 -16.988 1.740 12 A_C6:G3_B A 6 ? B 3 ? 19 1 1 A A 7 1_555 B U 2 1_555 0.096 -0.126 0.532 0.208 -8.591 -2.111 13 A_A7:U2_B A 7 ? B 2 ? 20 1 1 A C 8 1_555 B G 1 1_555 -0.126 -0.095 -0.148 7.546 -12.259 -1.817 14 A_C8:G1_B A 8 ? B 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B C 6 1_555 A G 3 1_555 B A 7 1_555 A U 2 1_555 -0.330 -1.564 3.171 -0.926 11.705 27.801 -5.109 0.468 2.345 23.098 1.828 30.134 1 BB_C6A7:U2G3_AA B 6 ? A 3 ? B 7 ? A 2 ? 1 B A 7 1_555 A U 2 1_555 B C 8 1_555 A G 1 1_555 0.392 -1.360 3.300 0.804 11.458 32.759 -3.944 -0.541 2.696 19.580 -1.374 34.662 2 BB_A7C8:G1U2_AA B 7 ? A 2 ? B 8 ? A 1 ? 1 B C 8 1_555 A G 1 1_555 C G 1 1_555 D C 8 1_555 0.240 -3.698 3.486 -2.290 17.098 -11.203 -2.391 -1.036 5.002 -56.733 -7.598 -20.547 3 BC_C8G1:C8G1_DA B 8 ? A 1 ? C 1 ? D 8 ? 1 C G 1 1_555 D C 8 1_555 C U 2 1_555 D A 7 1_555 -0.547 -1.231 3.296 0.519 5.651 32.925 -3.055 1.035 3.040 9.878 -0.907 33.397 4 CC_G1U2:A7C8_DD C 1 ? D 8 ? C 2 ? D 7 ? 1 C U 2 1_555 D A 7 1_555 C G 3 1_555 D C 6 1_555 0.779 -1.333 3.037 -0.209 12.843 34.767 -3.587 -1.252 2.408 20.641 0.335 36.995 5 CC_U2G3:C6A7_DD C 2 ? D 7 ? C 3 ? D 6 ? 1 C G 3 1_555 D C 6 1_555 C US5 4 1_555 D A 5 1_555 0.407 -1.464 3.339 -1.139 4.111 31.216 -3.456 -0.960 3.109 7.594 2.104 31.499 6 CC_G3US54:A5C6_DD C 3 ? D 6 ? C 4 ? D 5 ? 1 C US5 4 1_555 D A 5 1_555 C A 5 1_555 D US5 4 1_555 -0.038 -1.859 2.439 -0.494 7.066 27.627 -4.866 0.000 1.915 14.497 1.014 28.504 7 CC_US54A5:US54A5_DD C 4 ? D 5 ? C 5 ? D 4 ? 1 C A 5 1_555 D US5 4 1_555 C C 6 1_555 D G 3 1_555 -0.547 -1.270 3.187 4.369 10.724 30.227 -3.992 1.678 2.502 19.681 -8.017 32.321 8 CC_A5C6:G3US54_DD C 5 ? D 4 ? C 6 ? D 3 ? 1 C C 6 1_555 D G 3 1_555 C A 7 1_555 D U 2 1_555 -0.184 -1.541 3.379 0.228 17.400 29.109 -5.212 0.349 2.142 31.338 -0.412 33.818 9 CC_C6A7:U2G3_DD C 6 ? D 3 ? C 7 ? D 2 ? 1 C A 7 1_555 D U 2 1_555 C C 8 1_555 D G 1 1_555 0.391 -1.025 3.077 -0.906 4.859 28.504 -3.036 -0.967 2.853 9.776 1.822 28.920 10 CC_A7C8:G1U2_DD C 7 ? D 2 ? C 8 ? D 1 ? 1 A C 6 1_555 B G 3 1_555 A A 7 1_555 B U 2 1_555 -0.224 -1.667 3.183 -3.312 9.666 30.862 -4.512 -0.123 2.567 17.570 6.020 32.471 11 AA_C6A7:U2G3_BB A 6 ? B 3 ? A 7 ? B 2 ? 1 A A 7 1_555 B U 2 1_555 A C 8 1_555 B G 1 1_555 0.262 -1.380 3.053 6.214 2.380 31.259 -2.907 0.567 2.939 4.355 -11.370 31.942 12 AA_A7C8:G1U2_BB A 7 ? B 2 ? A 8 ? B 1 ? # _atom_sites.entry_id 4IQS _atom_sites.fract_transf_matrix[1][1] 0.021274 _atom_sites.fract_transf_matrix[1][2] 0.012282 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024565 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.002824 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P SE # loop_