HEADER BIOTIN BINDING PROTEIN 15-JAN-13 4IRW TITLE CO-CRYSTALLIZATION OF STREPTAVIDIN-BIOTIN COMPLEX WITH A LANTHANIDE- TITLE 2 LIGAND COMPLEX GIVES RISE TO A NOVEL CRYSTAL FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: STREPTAVIDIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 36-163; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES AVIDINII; SOURCE 3 ORGANISM_TAXID: 1895; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS BETA BARREL, BIOTIN BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.A.M.S.S.BANDARA,D.Q.LIU,A.HINDUPUR,K.F.TESH,R.O.FOX REVDAT 2 28-FEB-24 4IRW 1 REMARK SEQADV LINK REVDAT 1 29-JAN-14 4IRW 0 JRNL AUTH R.A.M.S.S.BANDARA,D.Q.LIU,A.HINDUPUR,K.F.TESH,R.O.FOX JRNL TITL CO-CRYSTALLIZATION OF STREPTAVIDIN-BIOTIN COMPLEX WITH A JRNL TITL 2 LANTHANIDE-LIGAND COMPLEX GIVES RISE TO A NOVEL CRYSTAL FORM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 79.6 REMARK 3 NUMBER OF REFLECTIONS : 21015 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.126 REMARK 3 R VALUE (WORKING SET) : 0.123 REMARK 3 FREE R VALUE : 0.154 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.490 REMARK 3 FREE R VALUE TEST SET COUNT : 1957 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.8640 - 4.1822 0.97 1605 170 0.1360 0.1352 REMARK 3 2 4.1822 - 3.3213 0.99 1654 165 0.1119 0.1164 REMARK 3 3 3.3213 - 2.9020 0.99 1632 170 0.1144 0.1528 REMARK 3 4 2.9020 - 2.6368 0.98 1594 167 0.1183 0.1219 REMARK 3 5 2.6368 - 2.4480 0.98 1614 166 0.1056 0.1669 REMARK 3 6 2.4480 - 2.3037 0.97 1585 167 0.1066 0.1511 REMARK 3 7 2.3037 - 2.1884 0.96 1588 168 0.1082 0.1496 REMARK 3 8 2.1884 - 2.0932 0.94 1566 155 0.0997 0.1457 REMARK 3 9 2.0932 - 2.0126 0.95 1572 166 0.1099 0.1562 REMARK 3 10 2.0126 - 1.9432 0.93 1527 162 0.1222 0.1809 REMARK 3 11 1.9432 - 1.8824 0.93 1536 159 0.1220 0.1779 REMARK 3 12 1.8824 - 1.8286 0.93 1536 161 0.1288 0.1543 REMARK 3 13 1.8286 - 1.7805 0.93 1521 163 0.1291 0.1817 REMARK 3 14 1.7805 - 1.7371 0.92 1536 163 0.1338 0.1953 REMARK 3 15 1.7371 - 1.6976 0.92 1511 155 0.1522 0.2128 REMARK 3 16 1.6976 - 1.6615 0.91 1499 154 0.1579 0.1900 REMARK 3 17 1.6615 - 1.6282 0.91 1513 162 0.1552 0.1960 REMARK 3 18 1.6282 - 1.5975 0.91 1491 163 0.1523 0.1800 REMARK 3 19 1.5975 - 1.5690 0.90 1510 156 0.1726 0.2054 REMARK 3 20 1.5690 - 1.5424 0.87 1396 147 0.1608 0.2249 REMARK 3 21 1.5424 - 1.5175 0.71 1175 124 0.1735 0.2263 REMARK 3 22 1.5175 - 1.4942 0.57 934 97 0.1870 0.2521 REMARK 3 23 1.4942 - 1.4722 0.48 788 83 0.1943 0.2464 REMARK 3 24 1.4722 - 1.4515 0.39 636 73 0.2202 0.2643 REMARK 3 25 1.4515 - 1.4318 0.30 491 52 0.2562 0.3319 REMARK 3 26 1.4318 - 1.4132 0.20 321 36 0.2847 0.2732 REMARK 3 27 1.4132 - 1.3960 0.07 115 11 0.3710 0.4528 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.190 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 1129 REMARK 3 ANGLE : 1.431 1502 REMARK 3 CHIRALITY : 0.077 153 REMARK 3 PLANARITY : 0.005 202 REMARK 3 DIHEDRAL : 8.920 500 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4IRW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000077131. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-AUG-11 REMARK 200 TEMPERATURE (KELVIN) : 93.15 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5417 REMARK 200 MONOCHROMATOR : OSMIC VARIMAX HF OPTIC REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK 9.9.8.9 W9RSSI REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21044 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.396 REMARK 200 RESOLUTION RANGE LOW (A) : 27.860 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 81.5 REMARK 200 DATA REDUNDANCY : 6.260 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 22.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.08 REMARK 200 R MERGE FOR SHELL (I) : 0.37700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 UL PROTEIN (PH 8.0) INCUBATED WITH REMARK 280 SATURATED BIOTIN SOLUTION + 1.5 UL 200 MM NA3[TB(DPA)3] + 3 UL REMARK 280 60% V/V MPD, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y+1/2,-Z REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 32.21150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.69750 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 32.21150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.69750 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 32.21150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 35.69750 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 32.21150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 35.69750 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 71.39500 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 71.39500 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 N1 PDC A 202 LIES ON A SPECIAL POSITION. REMARK 375 C4 PDC A 202 LIES ON A SPECIAL POSITION. REMARK 375 N1 PDC A 205 LIES ON A SPECIAL POSITION. REMARK 375 C4 PDC A 205 LIES ON A SPECIAL POSITION. REMARK 375 N1 PDC A 211 LIES ON A SPECIAL POSITION. REMARK 375 C4 PDC A 211 LIES ON A SPECIAL POSITION. REMARK 375 TB TB A 214 LIES ON A SPECIAL POSITION. REMARK 375 TB TB A 215 LIES ON A SPECIAL POSITION. REMARK 375 TB TB A 217 LIES ON A SPECIAL POSITION. REMARK 375 NA NA A 219 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 315 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 375 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 386 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 124 REMARK 465 PRO A 125 REMARK 465 SER A 126 REMARK 465 ALA A 127 REMARK 465 ALA A 128 REMARK 465 SER A 129 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 N1 PDC A 205 C2 PDC A 205 6565 1.37 REMARK 500 C3 PDC A 205 C4 PDC A 205 6565 1.38 REMARK 500 O HOH A 401 O HOH A 402 6555 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 42 -158.76 65.23 REMARK 500 THR A 56 34.37 -97.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 219 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 47 O REMARK 620 2 THR A 47 O 0.4 REMARK 620 3 THR A 66 OG1 104.2 104.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 TB A 216 TB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PDC A 201 O2 REMARK 620 2 PDC A 201 O4 127.4 REMARK 620 3 PDC A 201 N1 63.9 63.6 REMARK 620 4 PDC A 204 O2 75.2 151.8 133.4 REMARK 620 5 PDC A 204 O4 81.6 78.9 71.1 125.2 REMARK 620 6 PDC A 204 N1 76.6 132.5 122.9 63.0 63.6 REMARK 620 7 PDC A 208 O2 144.9 81.5 140.8 85.7 86.0 68.5 REMARK 620 8 PDC A 208 O4 80.2 87.6 72.7 79.6 143.6 139.8 125.4 REMARK 620 9 PDC A 208 N1 136.5 75.2 119.2 76.7 141.9 117.9 63.0 62.5 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 TB A 215 TB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PDC A 202 O2 REMARK 620 2 PDC A 202 N1 64.0 REMARK 620 3 PDC A 207 O4 76.8 138.8 REMARK 620 4 PDC A 207 O2 97.3 74.1 125.1 REMARK 620 5 PDC A 207 N1 82.5 119.1 64.1 60.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 TB A 218 TB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PDC A 203 O2 REMARK 620 2 PDC A 203 O4 125.4 REMARK 620 3 PDC A 203 N1 62.1 63.3 REMARK 620 4 PDC A 209 O4 71.3 95.8 74.3 REMARK 620 5 PDC A 209 O2 157.8 70.5 131.4 126.2 REMARK 620 6 PDC A 209 N1 130.9 78.1 118.1 63.1 63.1 REMARK 620 7 PDC A 210 O2 71.8 158.6 131.2 76.9 97.3 80.7 REMARK 620 8 PDC A 210 O4 89.6 71.3 71.0 145.2 81.0 138.9 125.5 REMARK 620 9 PDC A 210 N1 75.2 130.1 116.2 133.5 82.6 125.6 62.4 63.4 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 TB A 214 TB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PDC A 205 O2 REMARK 620 2 PDC A 205 N1 63.4 REMARK 620 3 PDC A 206 O2 80.6 138.3 REMARK 620 4 PDC A 206 O4 88.4 74.6 127.1 REMARK 620 5 PDC A 206 N1 70.1 116.7 64.3 63.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 TB A 217 TB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PDC A 211 O2 REMARK 620 2 PDC A 211 N1 60.6 REMARK 620 3 PDC A 212 O2 91.9 76.1 REMARK 620 4 PDC A 212 O4 78.0 135.1 124.7 REMARK 620 5 PDC A 212 N1 82.2 122.6 62.2 62.5 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 209 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 211 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 212 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BTN A 213 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TB A 214 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TB A 215 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TB A 216 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TB A 217 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TB A 218 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 219 DBREF 4IRW A 2 129 UNP P22629 SAV_STRAV 36 163 SEQADV 4IRW GLY A 1 UNP P22629 EXPRESSION TAG SEQRES 1 A 129 GLY ALA ALA GLU ALA GLY ILE THR GLY THR TRP TYR ASN SEQRES 2 A 129 GLN LEU GLY SER THR PHE ILE VAL THR ALA GLY ALA ASP SEQRES 3 A 129 GLY ALA LEU THR GLY THR TYR GLU SER ALA VAL GLY ASN SEQRES 4 A 129 ALA GLU SER ARG TYR VAL LEU THR GLY ARG TYR ASP SER SEQRES 5 A 129 ALA PRO ALA THR ASP GLY SER GLY THR ALA LEU GLY TRP SEQRES 6 A 129 THR VAL ALA TRP LYS ASN ASN TYR ARG ASN ALA HIS SER SEQRES 7 A 129 ALA THR THR TRP SER GLY GLN TYR VAL GLY GLY ALA GLU SEQRES 8 A 129 ALA ARG ILE ASN THR GLN TRP LEU LEU THR SER GLY THR SEQRES 9 A 129 THR GLU ALA ASN ALA TRP LYS SER THR LEU VAL GLY HIS SEQRES 10 A 129 ASP THR PHE THR LYS VAL LYS PRO SER ALA ALA SER HET PDC A 201 15 HET PDC A 202 9 HET PDC A 203 15 HET PDC A 204 15 HET PDC A 205 9 HET PDC A 206 15 HET PDC A 207 15 HET PDC A 208 15 HET PDC A 209 15 HET PDC A 210 15 HET PDC A 211 9 HET PDC A 212 15 HET BTN A 213 31 HET TB A 214 1 HET TB A 215 1 HET TB A 216 1 HET TB A 217 1 HET TB A 218 1 HET NA A 219 1 HETNAM PDC PYRIDINE-2,6-DICARBOXYLIC ACID HETNAM BTN BIOTIN HETNAM TB TERBIUM(III) ION HETNAM NA SODIUM ION HETSYN PDC DIPICOLINIC ACID FORMUL 2 PDC 12(C7 H5 N O4) FORMUL 14 BTN C10 H16 N2 O3 S FORMUL 15 TB 5(TB 3+) FORMUL 20 NA NA 1+ FORMUL 21 HOH *115(H2 O) HELIX 1 1 GLY A 1 THR A 8 1 8 HELIX 2 2 ASN A 108 LYS A 111 5 4 SHEET 1 A 9 GLY A 9 ASN A 13 0 SHEET 2 A 9 THR A 18 ALA A 23 -1 O PHE A 19 N TRP A 11 SHEET 3 A 9 ALA A 28 GLU A 34 -1 O THR A 30 N THR A 22 SHEET 4 A 9 TYR A 44 TYR A 50 -1 O TYR A 44 N TYR A 33 SHEET 5 A 9 THR A 61 LYS A 70 -1 O THR A 66 N THR A 47 SHEET 6 A 9 ASN A 75 VAL A 87 -1 O THR A 80 N VAL A 67 SHEET 7 A 9 ARG A 93 SER A 102 -1 O GLN A 97 N SER A 83 SHEET 8 A 9 THR A 113 THR A 121 -1 O PHE A 120 N ILE A 94 SHEET 9 A 9 GLY A 9 ASN A 13 -1 N TYR A 12 O THR A 121 LINK O BTHR A 47 NA NA A 219 1555 1555 2.74 LINK O ATHR A 47 NA NA A 219 1555 1555 2.75 LINK OG1 THR A 66 NA NA A 219 1555 1555 2.73 LINK O2 PDC A 201 TB TB A 216 1555 1555 2.40 LINK O4 PDC A 201 TB TB A 216 1555 1555 2.40 LINK N1 PDC A 201 TB TB A 216 1555 1555 2.47 LINK O2 PDC A 202 TB TB A 215 1555 1555 2.30 LINK N1 PDC A 202 TB TB A 215 1555 1555 2.33 LINK O2 PDC A 203 TB TB A 218 1555 1555 2.40 LINK O4 PDC A 203 TB TB A 218 1555 1555 2.40 LINK N1 PDC A 203 TB TB A 218 1555 1555 2.48 LINK O2 PDC A 204 TB TB A 216 1555 1555 2.40 LINK O4 PDC A 204 TB TB A 216 1555 1555 2.41 LINK N1 PDC A 204 TB TB A 216 1555 1555 2.48 LINK O2 PDC A 205 TB TB A 214 1555 1555 2.45 LINK N1 PDC A 205 TB TB A 214 1555 1555 2.50 LINK O2 PDC A 206 TB TB A 214 1555 1555 2.37 LINK O4 PDC A 206 TB TB A 214 1555 1555 2.38 LINK N1 PDC A 206 TB TB A 214 1555 1555 2.47 LINK O4 PDC A 207 TB TB A 215 1555 1555 2.39 LINK O2 PDC A 207 TB TB A 215 1555 1555 2.41 LINK N1 PDC A 207 TB TB A 215 1555 1555 2.48 LINK O2 PDC A 208 TB TB A 216 1555 1555 2.39 LINK O4 PDC A 208 TB TB A 216 1555 1555 2.40 LINK N1 PDC A 208 TB TB A 216 1555 1555 2.48 LINK O4 PDC A 209 TB TB A 218 1555 1555 2.40 LINK O2 PDC A 209 TB TB A 218 1555 1555 2.40 LINK N1 PDC A 209 TB TB A 218 1555 1555 2.48 LINK O2 APDC A 210 TB TB A 218 1555 1555 2.40 LINK O4 APDC A 210 TB TB A 218 1555 1555 2.40 LINK N1 APDC A 210 TB TB A 218 1555 1555 2.48 LINK O2 PDC A 211 TB TB A 217 1555 1555 2.43 LINK N1 PDC A 211 TB TB A 217 1555 1555 2.51 LINK O2 APDC A 212 TB TB A 217 1555 1555 2.40 LINK O4 APDC A 212 TB TB A 217 1555 1555 2.40 LINK N1 APDC A 212 TB TB A 217 1555 1555 2.48 SITE 1 AC1 6 HIS A 77 PDC A 204 PDC A 208 TB A 216 SITE 2 AC1 6 HOH A 361 HOH A 401 SITE 1 AC2 7 GLY A 1 ARG A 43 PDC A 206 PDC A 207 SITE 2 AC2 7 TB A 215 HOH A 357 HOH A 405 SITE 1 AC3 7 GLY A 38 ASN A 39 TRP A 110 LYS A 111 SITE 2 AC3 7 PDC A 209 PDC A 210 TB A 218 SITE 1 AC4 8 ASN A 71 TYR A 73 ARG A 74 ASN A 75 SITE 2 AC4 8 PDC A 201 PDC A 208 TB A 216 HOH A 336 SITE 1 AC5 7 GLU A 34 GLU A 41 SER A 42 PDC A 206 SITE 2 AC5 7 TB A 214 HOH A 330 HOH A 384 SITE 1 AC6 9 GLU A 34 GLU A 41 SER A 42 ARG A 43 SITE 2 AC6 9 TYR A 73 PDC A 202 PDC A 205 TB A 214 SITE 3 AC6 9 HOH A 343 SITE 1 AC7 8 GLY A 1 ALA A 2 PDC A 202 TB A 215 SITE 2 AC7 8 HOH A 344 HOH A 364 HOH A 381 HOH A 399 SITE 1 AC8 5 ARG A 74 ASN A 75 PDC A 201 PDC A 204 SITE 2 AC8 5 TB A 216 SITE 1 AC9 4 LYS A 111 PDC A 203 PDC A 210 TB A 218 SITE 1 BC1 10 ASN A 39 SER A 102 LYS A 111 LEU A 114 SITE 2 BC1 10 PDC A 203 PDC A 209 BTN A 213 TB A 218 SITE 3 BC1 10 HOH A 375 HOH A 414 SITE 1 BC2 5 ASP A 26 ARG A 49 PDC A 212 TB A 217 SITE 2 BC2 5 HOH A 369 SITE 1 BC3 13 GLY A 24 ALA A 25 ASP A 26 GLY A 27 SITE 2 BC3 13 ALA A 28 THR A 30 VAL A 45 THR A 47 SITE 3 BC3 13 ARG A 49 PDC A 211 TB A 217 HOH A 403 SITE 4 BC3 13 HOH A 415 SITE 1 BC4 15 ASN A 13 LEU A 15 SER A 17 TYR A 33 SITE 2 BC4 15 SER A 35 VAL A 37 ASN A 39 TRP A 69 SITE 3 BC4 15 ALA A 76 SER A 78 THR A 80 TRP A 98 SITE 4 BC4 15 LEU A 100 ASP A 118 PDC A 210 SITE 1 BC5 2 PDC A 205 PDC A 206 SITE 1 BC6 2 PDC A 202 PDC A 207 SITE 1 BC7 3 PDC A 201 PDC A 204 PDC A 208 SITE 1 BC8 2 PDC A 211 PDC A 212 SITE 1 BC9 3 PDC A 203 PDC A 209 PDC A 210 SITE 1 CC1 3 THR A 47 GLY A 48 THR A 66 CRYST1 64.423 71.395 55.494 90.00 90.00 90.00 C 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015522 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014007 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018020 0.00000