data_4IS1 # _entry.id 4IS1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4IS1 pdb_00004is1 10.2210/pdb4is1/pdb NDB NA2225 ? ? RCSB RCSB077136 ? ? WWPDB D_1000077136 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4F2J _pdbx_database_related.details 'CRYSTAL STRUCTURE OF ZNF217 BOUND TO DNA, P6522 CRYSTAL FORM' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4IS1 _pdbx_database_status.recvd_initial_deposition_date 2013-01-16 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Vandevenne, M.S.' 1 'Jacques, D.A.' 2 'Guss, J.M.' 3 'Mackay, J.P.' 4 # _citation.id primary _citation.title 'New insights into DNA recognition by zinc fingers revealed by structural analysis of the oncoprotein ZNF217.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 288 _citation.page_first 10616 _citation.page_last 10627 _citation.year 2013 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 1083-351X _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23436653 _citation.pdbx_database_id_DOI 10.1074/jbc.M112.441451 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vandevenne, M.' 1 ? primary 'Jacques, D.A.' 2 ? primary 'Artuz, C.' 3 ? primary 'Nguyen, C.D.' 4 ? primary 'Kwan, A.H.' 5 ? primary 'Segal, D.J.' 6 ? primary 'Matthews, J.M.' 7 ? primary 'Crossley, M.' 8 ? primary 'Guss, J.M.' 9 ? primary 'Mackay, J.P.' 10 ? # _cell.entry_id 4IS1 _cell.length_a 124.670 _cell.length_b 40.980 _cell.length_c 52.040 _cell.angle_alpha 90.00 _cell.angle_beta 97.21 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4IS1 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*TP*TP*TP*GP*CP*AP*GP*AP*AP*TP*CP*GP*AP*TP*TP*CP*TP*GP*CP*A)-3'" 6123.977 1 ? ? ? ? 2 polymer syn "5'-D(*AP*AP*TP*GP*CP*AP*GP*AP*AP*TP*CP*GP*AP*TP*TP*CP*TP*GP*CP*A)-3'" 6142.004 1 ? ? ? ? 3 polymer man 'Zinc finger protein 217' 6848.725 2 ? ? 'Zinc fingers 6 and 7 (UNP RESIDUES 469-523)' ? 4 non-polymer syn 'ZINC ION' 65.409 8 ? ? ? ? 5 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 6 water nat water 18.015 57 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'transcription factor ZnF217' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DT)(DT)(DT)(DG)(DC)(DA)(DG)(DA)(DA)(DT)(DC)(DG)(DA)(DT)(DT)(DC)(DT)(DG)(DC)(DA)' TTTGCAGAATCGATTCTGCA A ? 2 polydeoxyribonucleotide no no '(DA)(DA)(DT)(DG)(DC)(DA)(DG)(DA)(DA)(DT)(DC)(DG)(DA)(DT)(DT)(DC)(DT)(DG)(DC)(DA)' AATGCAGAATCGATTCTGCA B ? 3 'polypeptide(L)' no no GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK C,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DT n 1 3 DT n 1 4 DG n 1 5 DC n 1 6 DA n 1 7 DG n 1 8 DA n 1 9 DA n 1 10 DT n 1 11 DC n 1 12 DG n 1 13 DA n 1 14 DT n 1 15 DT n 1 16 DC n 1 17 DT n 1 18 DG n 1 19 DC n 1 20 DA n 2 1 DA n 2 2 DA n 2 3 DT n 2 4 DG n 2 5 DC n 2 6 DA n 2 7 DG n 2 8 DA n 2 9 DA n 2 10 DT n 2 11 DC n 2 12 DG n 2 13 DA n 2 14 DT n 2 15 DT n 2 16 DC n 2 17 DT n 2 18 DG n 2 19 DC n 2 20 DA n 3 1 GLY n 3 2 SER n 3 3 SER n 3 4 SER n 3 5 ARG n 3 6 GLU n 3 7 CYS n 3 8 SER n 3 9 TYR n 3 10 CYS n 3 11 GLY n 3 12 LYS n 3 13 PHE n 3 14 PHE n 3 15 ARG n 3 16 SER n 3 17 ASN n 3 18 TYR n 3 19 TYR n 3 20 LEU n 3 21 ASN n 3 22 ILE n 3 23 HIS n 3 24 LEU n 3 25 ARG n 3 26 THR n 3 27 HIS n 3 28 THR n 3 29 GLY n 3 30 GLU n 3 31 LYS n 3 32 PRO n 3 33 TYR n 3 34 LYS n 3 35 CYS n 3 36 GLU n 3 37 PHE n 3 38 CYS n 3 39 GLU n 3 40 TYR n 3 41 ALA n 3 42 ALA n 3 43 ALA n 3 44 GLN n 3 45 LYS n 3 46 THR n 3 47 SER n 3 48 LEU n 3 49 ARG n 3 50 TYR n 3 51 HIS n 3 52 LEU n 3 53 GLU n 3 54 ARG n 3 55 HIS n 3 56 HIS n 3 57 LYS n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ZNF217, ZABC1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta 2' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMal _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? 'synthetic construct' ? 32630 ? 2 1 sample ? ? 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP ZN217_HUMAN O75362 3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK 469 ? 2 PDB 4IS1 4IS1 1 ? ? ? 3 PDB 4IS1 4IS1 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4IS1 C 3 ? 57 ? O75362 469 ? 523 ? 469 523 2 1 4IS1 D 3 ? 57 ? O75362 469 ? 523 ? 469 523 3 2 4IS1 A 1 ? 20 ? 4IS1 1 ? 20 ? 1 20 4 3 4IS1 B 1 ? 20 ? 4IS1 1 ? 20 ? 1 20 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4IS1 GLY C 1 ? UNP O75362 ? ? 'expression tag' 467 1 1 4IS1 SER C 2 ? UNP O75362 ? ? 'expression tag' 468 2 2 4IS1 GLY D 1 ? UNP O75362 ? ? 'expression tag' 467 3 2 4IS1 SER D 2 ? UNP O75362 ? ? 'expression tag' 468 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 4IS1 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.54 _exptl_crystal.density_percent_sol 51.57 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6 _exptl_crystal_grow.pdbx_details '0.01M ZINC CHLORIDE, 0.1M MES, 20% PEG 6000 , VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2011-10-07 _diffrn_detector.details 'OSMIC MIRRORS' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'OSMIC VARIMAX' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 4IS1 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 61.84 _reflns.d_resolution_high 2.1 _reflns.number_obs 15360 _reflns.number_all 15360 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.086 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.14 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.89800 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 7.90 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 741 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4IS1 _refine.ls_number_reflns_obs 14519 _refine.ls_number_reflns_all 15360 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 15.00 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 98.32 _refine.ls_R_factor_obs 0.23873 _refine.ls_R_factor_all 0.23873 _refine.ls_R_factor_R_work 0.23741 _refine.ls_R_factor_R_free 0.26214 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 769 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.951 _refine.correlation_coeff_Fo_to_Fc_free 0.940 _refine.B_iso_mean 53.390 _refine.aniso_B[1][1] -7.91 _refine.aniso_B[2][2] 0.92 _refine.aniso_B[3][3] 6.73 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] 0.33 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 4F2J _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.252 _refine.pdbx_overall_ESU_R_Free 0.198 _refine.overall_SU_ML 0.199 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 16.982 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 909 _refine_hist.pdbx_number_atoms_nucleic_acid 814 _refine_hist.pdbx_number_atoms_ligand 9 _refine_hist.number_atoms_solvent 57 _refine_hist.number_atoms_total 1789 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 15.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.010 0.015 ? 1858 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.003 0.020 ? 1294 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.380 1.525 ? 2673 ? 'X-RAY DIFFRACTION' r_angle_other_deg 1.534 3.000 ? 3005 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 5.364 5.000 ? 106 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 31.582 21.091 ? 55 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 14.752 15.000 ? 160 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 14.646 15.000 ? 10 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.103 0.200 ? 239 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.009 0.020 ? 1541 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.001 0.020 ? 467 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.098 _refine_ls_shell.d_res_low 2.153 _refine_ls_shell.number_reflns_R_work 970 _refine_ls_shell.R_factor_R_work 0.435 _refine_ls_shell.percent_reflns_obs 89.02 _refine_ls_shell.R_factor_R_free 0.567 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 60 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 4IS1 _struct.title 'Crystal structure of ZNF217 bound to DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4IS1 _struct_keywords.pdbx_keywords 'METAL BINDING PROTEIN/DNA' _struct_keywords.text 'ZINC FINGER, TRANSCRIPTION FACTOR, METAL BINDING PROTEIN-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 5 ? K N N 4 ? L N N 4 ? M N N 4 ? N N N 6 ? O N N 6 ? P N N 6 ? Q N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER C 16 ? GLY C 29 ? SER C 482 GLY C 495 1 ? 14 HELX_P HELX_P2 2 GLN C 44 ? HIS C 56 ? GLN C 510 HIS C 522 1 ? 13 HELX_P HELX_P3 3 SER D 16 ? GLY D 29 ? SER D 482 GLY D 495 1 ? 14 HELX_P HELX_P4 4 GLN D 44 ? HIS D 56 ? GLN D 510 HIS D 522 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? B DG 12 N7 ? ? ? 1_555 E ZN . ZN ? ? B DG 12 B ZN 101 1_555 ? ? ? ? ? ? ? 2.451 ? ? metalc2 metalc ? ? B DT 17 OP2 ? ? ? 1_555 F ZN . ZN ? ? B DT 17 B ZN 102 1_555 ? ? ? ? ? ? ? 2.020 ? ? metalc3 metalc ? ? E ZN . ZN ? ? ? 1_555 O HOH . O ? ? B ZN 101 B HOH 210 1_555 ? ? ? ? ? ? ? 2.005 ? ? metalc4 metalc ? ? F ZN . ZN ? ? ? 1_555 O HOH . O ? ? B ZN 102 B HOH 211 1_555 ? ? ? ? ? ? ? 2.361 ? ? metalc5 metalc ? ? F ZN . ZN ? ? ? 1_555 Q HOH . O ? ? B ZN 102 D HOH 718 1_555 ? ? ? ? ? ? ? 2.259 ? ? metalc6 metalc ? ? C CYS 7 SG ? ? ? 1_555 H ZN . ZN ? ? C CYS 473 C ZN 602 1_555 ? ? ? ? ? ? ? 2.401 ? ? metalc7 metalc ? ? C CYS 10 SG ? ? ? 1_555 H ZN . ZN ? ? C CYS 476 C ZN 602 1_555 ? ? ? ? ? ? ? 2.320 ? ? metalc8 metalc ? ? C HIS 23 NE2 ? ? ? 1_555 H ZN . ZN ? ? C HIS 489 C ZN 602 1_555 ? ? ? ? ? ? ? 2.044 ? ? metalc9 metalc ? ? C HIS 27 NE2 ? ? ? 1_555 H ZN . ZN ? ? C HIS 493 C ZN 602 1_555 ? ? ? ? ? ? ? 2.206 ? ? metalc10 metalc ? ? C CYS 35 SG ? ? ? 1_555 G ZN . ZN ? ? C CYS 501 C ZN 601 1_555 ? ? ? ? ? ? ? 2.272 ? ? metalc11 metalc ? ? C CYS 38 SG ? ? ? 1_555 G ZN . ZN ? ? C CYS 504 C ZN 601 1_555 ? ? ? ? ? ? ? 1.939 ? ? metalc12 metalc ? ? C HIS 51 NE2 ? ? ? 1_555 G ZN . ZN ? ? C HIS 517 C ZN 601 1_555 ? ? ? ? ? ? ? 2.031 ? ? metalc13 metalc ? ? C HIS 55 NE2 ? ? ? 1_555 I ZN . ZN ? ? C HIS 521 C ZN 603 1_555 ? ? ? ? ? ? ? 2.278 ? ? metalc14 metalc ? ? C HIS 56 NE2 ? ? ? 1_555 G ZN . ZN ? ? C HIS 522 C ZN 601 1_555 ? ? ? ? ? ? ? 2.388 ? ? metalc15 metalc ? ? D CYS 7 SG ? ? ? 1_555 L ZN . ZN ? ? D CYS 473 D ZN 602 1_555 ? ? ? ? ? ? ? 2.231 ? ? metalc16 metalc ? ? D CYS 10 SG ? ? ? 1_555 L ZN . ZN ? ? D CYS 476 D ZN 602 1_555 ? ? ? ? ? ? ? 2.181 ? ? metalc17 metalc ? ? D HIS 23 NE2 ? ? ? 1_555 L ZN . ZN ? ? D HIS 489 D ZN 602 1_555 ? ? ? ? ? ? ? 2.096 ? ? metalc18 metalc ? ? D HIS 27 NE2 ? ? ? 1_555 L ZN . ZN ? ? D HIS 493 D ZN 602 1_555 ? ? ? ? ? ? ? 2.070 ? ? metalc19 metalc ? ? D CYS 35 SG ? ? ? 1_555 K ZN . ZN ? ? D CYS 501 D ZN 601 1_555 ? ? ? ? ? ? ? 2.118 ? ? metalc20 metalc ? ? D CYS 38 SG ? ? ? 1_555 K ZN . ZN ? ? D CYS 504 D ZN 601 1_555 ? ? ? ? ? ? ? 2.268 ? ? metalc21 metalc ? ? D HIS 51 NE2 ? ? ? 1_555 K ZN . ZN ? ? D HIS 517 D ZN 601 1_555 ? ? ? ? ? ? ? 2.488 ? ? metalc22 metalc ? ? D HIS 56 NE2 ? ? ? 1_555 K ZN . ZN ? ? D HIS 522 D ZN 601 1_555 ? ? ? ? ? ? ? 1.991 ? ? hydrog1 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 20 N1 ? ? A DT 3 B DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 20 N6 ? ? A DT 3 B DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 19 N3 ? ? A DG 4 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 19 O2 ? ? A DG 4 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 19 N4 ? ? A DG 4 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 18 N1 ? ? A DC 5 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 18 O6 ? ? A DC 5 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 18 N2 ? ? A DC 5 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 17 N3 ? ? A DA 6 B DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 17 O4 ? ? A DA 6 B DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DC 16 N3 ? ? A DG 7 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DC 16 O2 ? ? A DG 7 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DC 16 N4 ? ? A DG 7 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 8 N1 ? ? ? 1_555 B DT 15 N3 ? ? A DA 8 B DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 8 N6 ? ? ? 1_555 B DT 15 O4 ? ? A DA 8 B DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 9 N1 ? ? ? 1_555 B DT 14 N3 ? ? A DA 9 B DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 9 N6 ? ? ? 1_555 B DT 14 O4 ? ? A DA 9 B DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 10 N3 ? ? ? 1_555 B DA 13 N1 ? ? A DT 10 B DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 10 O4 ? ? ? 1_555 B DA 13 N6 ? ? A DT 10 B DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 12 N1 ? ? A DC 11 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 12 O6 ? ? A DC 11 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 12 N2 ? ? A DC 11 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DC 11 N3 ? ? A DG 12 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DC 11 O2 ? ? A DG 12 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DC 11 N4 ? ? A DG 12 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DA 13 N1 ? ? ? 1_555 B DT 10 N3 ? ? A DA 13 B DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DA 13 N6 ? ? ? 1_555 B DT 10 O4 ? ? A DA 13 B DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DT 14 N3 ? ? ? 1_555 B DA 9 N1 ? ? A DT 14 B DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DT 14 O4 ? ? ? 1_555 B DA 9 N6 ? ? A DT 14 B DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DT 15 N3 ? ? ? 1_555 B DA 8 N1 ? ? A DT 15 B DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DT 15 O4 ? ? ? 1_555 B DA 8 N6 ? ? A DT 15 B DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DC 16 N3 ? ? ? 1_555 B DG 7 N1 ? ? A DC 16 B DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DC 16 N4 ? ? ? 1_555 B DG 7 O6 ? ? A DC 16 B DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DC 16 O2 ? ? ? 1_555 B DG 7 N2 ? ? A DC 16 B DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DT 17 N3 ? ? ? 1_555 B DA 6 N1 ? ? A DT 17 B DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DT 17 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 17 B DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DG 18 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 18 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DG 18 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 18 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DG 18 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 18 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DC 19 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 19 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DC 19 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 19 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DC 19 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 19 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DA 20 N1 ? ? ? 1_555 B DT 3 N3 ? ? A DA 20 B DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DA 20 N6 ? ? ? 1_555 B DT 3 O4 ? ? A DA 20 B DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR C 33 ? LYS C 34 ? TYR C 499 LYS C 500 A 2 ALA C 41 ? ALA C 42 ? ALA C 507 ALA C 508 B 1 TYR D 33 ? LYS D 34 ? TYR D 499 LYS D 500 B 2 ALA D 41 ? ALA D 42 ? ALA D 507 ALA D 508 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR C 33 ? N TYR C 499 O ALA C 42 ? O ALA C 508 B 1 2 N TYR D 33 ? N TYR D 499 O ALA D 42 ? O ALA D 508 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B ZN 101 ? 2 'BINDING SITE FOR RESIDUE ZN B 101' AC2 Software B ZN 102 ? 4 'BINDING SITE FOR RESIDUE ZN B 102' AC3 Software C ZN 601 ? 4 'BINDING SITE FOR RESIDUE ZN C 601' AC4 Software C ZN 602 ? 4 'BINDING SITE FOR RESIDUE ZN C 602' AC5 Software C ZN 603 ? 1 'BINDING SITE FOR RESIDUE ZN C 603' AC6 Software D ZN 601 ? 4 'BINDING SITE FOR RESIDUE ZN D 601' AC7 Software D ZN 602 ? 4 'BINDING SITE FOR RESIDUE ZN D 602' AC8 Software D ZN 603 ? 4 'BINDING SITE FOR RESIDUE ZN D 603' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 DG B 12 ? DG B 12 . ? 1_555 ? 2 AC1 2 HOH O . ? HOH B 210 . ? 1_555 ? 3 AC2 4 DT B 17 ? DT B 17 . ? 1_555 ? 4 AC2 4 HOH O . ? HOH B 211 . ? 1_555 ? 5 AC2 4 HOH Q . ? HOH D 714 . ? 1_555 ? 6 AC2 4 HOH Q . ? HOH D 718 . ? 1_555 ? 7 AC3 4 CYS C 35 ? CYS C 501 . ? 1_555 ? 8 AC3 4 CYS C 38 ? CYS C 504 . ? 1_555 ? 9 AC3 4 HIS C 51 ? HIS C 517 . ? 1_555 ? 10 AC3 4 HIS C 56 ? HIS C 522 . ? 1_555 ? 11 AC4 4 CYS C 7 ? CYS C 473 . ? 1_555 ? 12 AC4 4 CYS C 10 ? CYS C 476 . ? 1_555 ? 13 AC4 4 HIS C 23 ? HIS C 489 . ? 1_555 ? 14 AC4 4 HIS C 27 ? HIS C 493 . ? 1_555 ? 15 AC5 1 HIS C 55 ? HIS C 521 . ? 1_555 ? 16 AC6 4 CYS D 35 ? CYS D 501 . ? 1_555 ? 17 AC6 4 CYS D 38 ? CYS D 504 . ? 1_555 ? 18 AC6 4 HIS D 51 ? HIS D 517 . ? 1_555 ? 19 AC6 4 HIS D 56 ? HIS D 522 . ? 1_555 ? 20 AC7 4 CYS D 7 ? CYS D 473 . ? 1_555 ? 21 AC7 4 CYS D 10 ? CYS D 476 . ? 1_555 ? 22 AC7 4 HIS D 23 ? HIS D 489 . ? 1_555 ? 23 AC7 4 HIS D 27 ? HIS D 493 . ? 1_555 ? 24 AC8 4 GLU C 36 ? GLU C 502 . ? 4_556 ? 25 AC8 4 GLU D 6 ? GLU D 472 . ? 1_565 ? 26 AC8 4 GLY D 11 ? GLY D 477 . ? 1_565 ? 27 AC8 4 HIS D 55 ? HIS D 521 . ? 1_555 ? # _database_PDB_matrix.entry_id 4IS1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4IS1 _atom_sites.fract_transf_matrix[1][1] 0.008021 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001015 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024402 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019369 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT DT A . n A 1 2 DT 2 2 2 DT DT A . n A 1 3 DT 3 3 3 DT DT A . n A 1 4 DG 4 4 4 DG DG A . n A 1 5 DC 5 5 5 DC DC A . n A 1 6 DA 6 6 6 DA DA A . n A 1 7 DG 7 7 7 DG DG A . n A 1 8 DA 8 8 8 DA DA A . n A 1 9 DA 9 9 9 DA DA A . n A 1 10 DT 10 10 10 DT DT A . n A 1 11 DC 11 11 11 DC DC A . n A 1 12 DG 12 12 12 DG DG A . n A 1 13 DA 13 13 13 DA DA A . n A 1 14 DT 14 14 14 DT DT A . n A 1 15 DT 15 15 15 DT DT A . n A 1 16 DC 16 16 16 DC DC A . n A 1 17 DT 17 17 17 DT DT A . n A 1 18 DG 18 18 18 DG DG A . n A 1 19 DC 19 19 19 DC DC A . n A 1 20 DA 20 20 20 DA DA A . n B 2 1 DA 1 1 1 DA DA B . n B 2 2 DA 2 2 2 DA DA B . n B 2 3 DT 3 3 3 DT DT B . n B 2 4 DG 4 4 4 DG DG B . n B 2 5 DC 5 5 5 DC DC B . n B 2 6 DA 6 6 6 DA DA B . n B 2 7 DG 7 7 7 DG DG B . n B 2 8 DA 8 8 8 DA DA B . n B 2 9 DA 9 9 9 DA DA B . n B 2 10 DT 10 10 10 DT DT B . n B 2 11 DC 11 11 11 DC DC B . n B 2 12 DG 12 12 12 DG DG B . n B 2 13 DA 13 13 13 DA DA B . n B 2 14 DT 14 14 14 DT DT B . n B 2 15 DT 15 15 15 DT DT B . n B 2 16 DC 16 16 16 DC DC B . n B 2 17 DT 17 17 17 DT DT B . n B 2 18 DG 18 18 18 DG DG B . n B 2 19 DC 19 19 19 DC DC B . n B 2 20 DA 20 20 20 DA DA B . n C 3 1 GLY 1 467 ? ? ? C . n C 3 2 SER 2 468 ? ? ? C . n C 3 3 SER 3 469 ? ? ? C . n C 3 4 SER 4 470 ? ? ? C . n C 3 5 ARG 5 471 471 ARG ARG C . n C 3 6 GLU 6 472 472 GLU GLU C . n C 3 7 CYS 7 473 473 CYS CYS C . n C 3 8 SER 8 474 474 SER SER C . n C 3 9 TYR 9 475 475 TYR TYR C . n C 3 10 CYS 10 476 476 CYS CYS C . n C 3 11 GLY 11 477 477 GLY GLY C . n C 3 12 LYS 12 478 478 LYS LYS C . n C 3 13 PHE 13 479 479 PHE PHE C . n C 3 14 PHE 14 480 480 PHE PHE C . n C 3 15 ARG 15 481 481 ARG ARG C . n C 3 16 SER 16 482 482 SER SER C . n C 3 17 ASN 17 483 483 ASN ASN C . n C 3 18 TYR 18 484 484 TYR TYR C . n C 3 19 TYR 19 485 485 TYR TYR C . n C 3 20 LEU 20 486 486 LEU LEU C . n C 3 21 ASN 21 487 487 ASN ASN C . n C 3 22 ILE 22 488 488 ILE ILE C . n C 3 23 HIS 23 489 489 HIS HIS C . n C 3 24 LEU 24 490 490 LEU LEU C . n C 3 25 ARG 25 491 491 ARG ARG C . n C 3 26 THR 26 492 492 THR THR C . n C 3 27 HIS 27 493 493 HIS HIS C . n C 3 28 THR 28 494 494 THR THR C . n C 3 29 GLY 29 495 495 GLY GLY C . n C 3 30 GLU 30 496 496 GLU GLU C . n C 3 31 LYS 31 497 497 LYS LYS C . n C 3 32 PRO 32 498 498 PRO PRO C . n C 3 33 TYR 33 499 499 TYR TYR C . n C 3 34 LYS 34 500 500 LYS LYS C . n C 3 35 CYS 35 501 501 CYS CYS C . n C 3 36 GLU 36 502 502 GLU GLU C . n C 3 37 PHE 37 503 503 PHE PHE C . n C 3 38 CYS 38 504 504 CYS CYS C . n C 3 39 GLU 39 505 505 GLU GLU C . n C 3 40 TYR 40 506 506 TYR TYR C . n C 3 41 ALA 41 507 507 ALA ALA C . n C 3 42 ALA 42 508 508 ALA ALA C . n C 3 43 ALA 43 509 509 ALA ALA C . n C 3 44 GLN 44 510 510 GLN GLN C . n C 3 45 LYS 45 511 511 LYS LYS C . n C 3 46 THR 46 512 512 THR THR C . n C 3 47 SER 47 513 513 SER SER C . n C 3 48 LEU 48 514 514 LEU LEU C . n C 3 49 ARG 49 515 515 ARG ARG C . n C 3 50 TYR 50 516 516 TYR TYR C . n C 3 51 HIS 51 517 517 HIS HIS C . n C 3 52 LEU 52 518 518 LEU LEU C . n C 3 53 GLU 53 519 519 GLU GLU C . n C 3 54 ARG 54 520 520 ARG ARG C . n C 3 55 HIS 55 521 521 HIS HIS C . n C 3 56 HIS 56 522 522 HIS HIS C . n C 3 57 LYS 57 523 ? ? ? C . n D 3 1 GLY 1 467 ? ? ? D . n D 3 2 SER 2 468 ? ? ? D . n D 3 3 SER 3 469 ? ? ? D . n D 3 4 SER 4 470 470 SER SER D . n D 3 5 ARG 5 471 471 ARG ARG D . n D 3 6 GLU 6 472 472 GLU GLU D . n D 3 7 CYS 7 473 473 CYS CYS D . n D 3 8 SER 8 474 474 SER SER D . n D 3 9 TYR 9 475 475 TYR TYR D . n D 3 10 CYS 10 476 476 CYS CYS D . n D 3 11 GLY 11 477 477 GLY GLY D . n D 3 12 LYS 12 478 478 LYS LYS D . n D 3 13 PHE 13 479 479 PHE PHE D . n D 3 14 PHE 14 480 480 PHE PHE D . n D 3 15 ARG 15 481 481 ARG ARG D . n D 3 16 SER 16 482 482 SER SER D . n D 3 17 ASN 17 483 483 ASN ASN D . n D 3 18 TYR 18 484 484 TYR TYR D . n D 3 19 TYR 19 485 485 TYR TYR D . n D 3 20 LEU 20 486 486 LEU LEU D . n D 3 21 ASN 21 487 487 ASN ASN D . n D 3 22 ILE 22 488 488 ILE ILE D . n D 3 23 HIS 23 489 489 HIS HIS D . n D 3 24 LEU 24 490 490 LEU LEU D . n D 3 25 ARG 25 491 491 ARG ARG D . n D 3 26 THR 26 492 492 THR THR D . n D 3 27 HIS 27 493 493 HIS HIS D . n D 3 28 THR 28 494 494 THR THR D . n D 3 29 GLY 29 495 495 GLY GLY D . n D 3 30 GLU 30 496 496 GLU GLU D . n D 3 31 LYS 31 497 497 LYS LYS D . n D 3 32 PRO 32 498 498 PRO PRO D . n D 3 33 TYR 33 499 499 TYR TYR D . n D 3 34 LYS 34 500 500 LYS LYS D . n D 3 35 CYS 35 501 501 CYS CYS D . n D 3 36 GLU 36 502 502 GLU GLU D . n D 3 37 PHE 37 503 503 PHE PHE D . n D 3 38 CYS 38 504 504 CYS CYS D . n D 3 39 GLU 39 505 505 GLU GLU D . n D 3 40 TYR 40 506 506 TYR TYR D . n D 3 41 ALA 41 507 507 ALA ALA D . n D 3 42 ALA 42 508 508 ALA ALA D . n D 3 43 ALA 43 509 509 ALA ALA D . n D 3 44 GLN 44 510 510 GLN GLN D . n D 3 45 LYS 45 511 511 LYS LYS D . n D 3 46 THR 46 512 512 THR THR D . n D 3 47 SER 47 513 513 SER SER D . n D 3 48 LEU 48 514 514 LEU LEU D . n D 3 49 ARG 49 515 515 ARG ARG D . n D 3 50 TYR 50 516 516 TYR TYR D . n D 3 51 HIS 51 517 517 HIS HIS D . n D 3 52 LEU 52 518 518 LEU LEU D . n D 3 53 GLU 53 519 519 GLU GLU D . n D 3 54 ARG 54 520 520 ARG ARG D . n D 3 55 HIS 55 521 521 HIS HIS D . n D 3 56 HIS 56 522 522 HIS HIS D . n D 3 57 LYS 57 523 523 LYS LYS D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 ZN 1 101 2 ZN ZN B . F 4 ZN 1 102 2 ZN ZN B . G 4 ZN 1 601 967 ZN ZN C . H 4 ZN 1 602 968 ZN ZN C . I 4 ZN 1 603 1 ZN ZN C . J 5 CL 1 604 1 CL CL C . K 4 ZN 1 601 967 ZN ZN D . L 4 ZN 1 602 968 ZN ZN D . M 4 ZN 1 603 1 ZN ZN D . N 6 HOH 1 101 2 HOH HOH A . N 6 HOH 2 102 12 HOH HOH A . N 6 HOH 3 103 23 HOH HOH A . N 6 HOH 4 104 26 HOH HOH A . N 6 HOH 5 105 33 HOH HOH A . N 6 HOH 6 106 42 HOH HOH A . N 6 HOH 7 107 43 HOH HOH A . N 6 HOH 8 108 52 HOH HOH A . N 6 HOH 9 109 55 HOH HOH A . N 6 HOH 10 110 57 HOH HOH A . O 6 HOH 1 201 15 HOH HOH B . O 6 HOH 2 202 22 HOH HOH B . O 6 HOH 3 203 28 HOH HOH B . O 6 HOH 4 204 29 HOH HOH B . O 6 HOH 5 205 31 HOH HOH B . O 6 HOH 6 206 34 HOH HOH B . O 6 HOH 7 207 35 HOH HOH B . O 6 HOH 8 208 37 HOH HOH B . O 6 HOH 9 209 39 HOH HOH B . O 6 HOH 10 210 51 HOH HOH B . O 6 HOH 11 211 53 HOH HOH B . O 6 HOH 12 212 56 HOH HOH B . P 6 HOH 1 701 24 HOH HOH C . P 6 HOH 2 702 7 HOH HOH C . P 6 HOH 3 703 9 HOH HOH C . P 6 HOH 4 704 11 HOH HOH C . P 6 HOH 5 705 13 HOH HOH C . P 6 HOH 6 706 14 HOH HOH C . P 6 HOH 7 707 17 HOH HOH C . P 6 HOH 8 708 19 HOH HOH C . P 6 HOH 9 709 20 HOH HOH C . P 6 HOH 10 710 21 HOH HOH C . P 6 HOH 11 711 25 HOH HOH C . P 6 HOH 12 712 36 HOH HOH C . P 6 HOH 13 713 40 HOH HOH C . P 6 HOH 14 714 41 HOH HOH C . P 6 HOH 15 715 46 HOH HOH C . P 6 HOH 16 716 48 HOH HOH C . Q 6 HOH 1 701 1 HOH HOH D . Q 6 HOH 2 702 3 HOH HOH D . Q 6 HOH 3 703 4 HOH HOH D . Q 6 HOH 4 704 5 HOH HOH D . Q 6 HOH 5 705 6 HOH HOH D . Q 6 HOH 6 706 8 HOH HOH D . Q 6 HOH 7 707 10 HOH HOH D . Q 6 HOH 8 708 16 HOH HOH D . Q 6 HOH 9 709 18 HOH HOH D . Q 6 HOH 10 710 27 HOH HOH D . Q 6 HOH 11 711 30 HOH HOH D . Q 6 HOH 12 712 32 HOH HOH D . Q 6 HOH 13 713 38 HOH HOH D . Q 6 HOH 14 714 44 HOH HOH D . Q 6 HOH 15 715 45 HOH HOH D . Q 6 HOH 16 716 47 HOH HOH D . Q 6 HOH 17 717 49 HOH HOH D . Q 6 HOH 18 718 50 HOH HOH D . Q 6 HOH 19 719 54 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5620 ? 1 MORE -138 ? 1 'SSA (A^2)' 13030 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N7 ? B DG 12 ? B DG 12 ? 1_555 ZN ? E ZN . ? B ZN 101 ? 1_555 O ? O HOH . ? B HOH 210 ? 1_555 83.6 ? 2 OP2 ? B DT 17 ? B DT 17 ? 1_555 ZN ? F ZN . ? B ZN 102 ? 1_555 O ? O HOH . ? B HOH 211 ? 1_555 106.6 ? 3 OP2 ? B DT 17 ? B DT 17 ? 1_555 ZN ? F ZN . ? B ZN 102 ? 1_555 O ? Q HOH . ? D HOH 718 ? 1_555 130.9 ? 4 O ? O HOH . ? B HOH 211 ? 1_555 ZN ? F ZN . ? B ZN 102 ? 1_555 O ? Q HOH . ? D HOH 718 ? 1_555 110.7 ? 5 SG ? C CYS 7 ? C CYS 473 ? 1_555 ZN ? H ZN . ? C ZN 602 ? 1_555 SG ? C CYS 10 ? C CYS 476 ? 1_555 107.1 ? 6 SG ? C CYS 7 ? C CYS 473 ? 1_555 ZN ? H ZN . ? C ZN 602 ? 1_555 NE2 ? C HIS 23 ? C HIS 489 ? 1_555 112.7 ? 7 SG ? C CYS 10 ? C CYS 476 ? 1_555 ZN ? H ZN . ? C ZN 602 ? 1_555 NE2 ? C HIS 23 ? C HIS 489 ? 1_555 103.3 ? 8 SG ? C CYS 7 ? C CYS 473 ? 1_555 ZN ? H ZN . ? C ZN 602 ? 1_555 NE2 ? C HIS 27 ? C HIS 493 ? 1_555 111.4 ? 9 SG ? C CYS 10 ? C CYS 476 ? 1_555 ZN ? H ZN . ? C ZN 602 ? 1_555 NE2 ? C HIS 27 ? C HIS 493 ? 1_555 115.7 ? 10 NE2 ? C HIS 23 ? C HIS 489 ? 1_555 ZN ? H ZN . ? C ZN 602 ? 1_555 NE2 ? C HIS 27 ? C HIS 493 ? 1_555 106.5 ? 11 SG ? C CYS 35 ? C CYS 501 ? 1_555 ZN ? G ZN . ? C ZN 601 ? 1_555 SG ? C CYS 38 ? C CYS 504 ? 1_555 122.6 ? 12 SG ? C CYS 35 ? C CYS 501 ? 1_555 ZN ? G ZN . ? C ZN 601 ? 1_555 NE2 ? C HIS 51 ? C HIS 517 ? 1_555 110.4 ? 13 SG ? C CYS 38 ? C CYS 504 ? 1_555 ZN ? G ZN . ? C ZN 601 ? 1_555 NE2 ? C HIS 51 ? C HIS 517 ? 1_555 101.1 ? 14 SG ? C CYS 35 ? C CYS 501 ? 1_555 ZN ? G ZN . ? C ZN 601 ? 1_555 NE2 ? C HIS 56 ? C HIS 522 ? 1_555 97.9 ? 15 SG ? C CYS 38 ? C CYS 504 ? 1_555 ZN ? G ZN . ? C ZN 601 ? 1_555 NE2 ? C HIS 56 ? C HIS 522 ? 1_555 128.3 ? 16 NE2 ? C HIS 51 ? C HIS 517 ? 1_555 ZN ? G ZN . ? C ZN 601 ? 1_555 NE2 ? C HIS 56 ? C HIS 522 ? 1_555 91.9 ? 17 SG ? D CYS 7 ? D CYS 473 ? 1_555 ZN ? L ZN . ? D ZN 602 ? 1_555 SG ? D CYS 10 ? D CYS 476 ? 1_555 114.5 ? 18 SG ? D CYS 7 ? D CYS 473 ? 1_555 ZN ? L ZN . ? D ZN 602 ? 1_555 NE2 ? D HIS 23 ? D HIS 489 ? 1_555 112.7 ? 19 SG ? D CYS 10 ? D CYS 476 ? 1_555 ZN ? L ZN . ? D ZN 602 ? 1_555 NE2 ? D HIS 23 ? D HIS 489 ? 1_555 108.7 ? 20 SG ? D CYS 7 ? D CYS 473 ? 1_555 ZN ? L ZN . ? D ZN 602 ? 1_555 NE2 ? D HIS 27 ? D HIS 493 ? 1_555 101.4 ? 21 SG ? D CYS 10 ? D CYS 476 ? 1_555 ZN ? L ZN . ? D ZN 602 ? 1_555 NE2 ? D HIS 27 ? D HIS 493 ? 1_555 111.8 ? 22 NE2 ? D HIS 23 ? D HIS 489 ? 1_555 ZN ? L ZN . ? D ZN 602 ? 1_555 NE2 ? D HIS 27 ? D HIS 493 ? 1_555 107.4 ? 23 SG ? D CYS 35 ? D CYS 501 ? 1_555 ZN ? K ZN . ? D ZN 601 ? 1_555 SG ? D CYS 38 ? D CYS 504 ? 1_555 102.8 ? 24 SG ? D CYS 35 ? D CYS 501 ? 1_555 ZN ? K ZN . ? D ZN 601 ? 1_555 NE2 ? D HIS 51 ? D HIS 517 ? 1_555 110.9 ? 25 SG ? D CYS 38 ? D CYS 504 ? 1_555 ZN ? K ZN . ? D ZN 601 ? 1_555 NE2 ? D HIS 51 ? D HIS 517 ? 1_555 84.0 ? 26 SG ? D CYS 35 ? D CYS 501 ? 1_555 ZN ? K ZN . ? D ZN 601 ? 1_555 NE2 ? D HIS 56 ? D HIS 522 ? 1_555 115.9 ? 27 SG ? D CYS 38 ? D CYS 504 ? 1_555 ZN ? K ZN . ? D ZN 601 ? 1_555 NE2 ? D HIS 56 ? D HIS 522 ? 1_555 121.5 ? 28 NE2 ? D HIS 51 ? D HIS 517 ? 1_555 ZN ? K ZN . ? D ZN 601 ? 1_555 NE2 ? D HIS 56 ? D HIS 522 ? 1_555 117.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-02-27 2 'Structure model' 1 1 2013-03-06 3 'Structure model' 1 2 2019-12-18 4 'Structure model' 1 3 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Source and taxonomy' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' citation 2 3 'Structure model' citation_author 3 3 'Structure model' pdbx_entity_src_syn 4 3 'Structure model' struct_ref_seq_dif 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' database_2 8 4 'Structure model' pdbx_initial_refinement_model 9 4 'Structure model' pdbx_struct_conn_angle 10 4 'Structure model' struct_conn 11 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation.journal_volume' 2 3 'Structure model' '_citation.page_first' 3 3 'Structure model' '_citation.page_last' 4 3 'Structure model' '_citation.pdbx_database_id_PubMed' 5 3 'Structure model' '_citation.title' 6 3 'Structure model' '_citation_author.name' 7 3 'Structure model' '_struct_ref_seq_dif.details' 8 4 'Structure model' '_database_2.pdbx_DOI' 9 4 'Structure model' '_database_2.pdbx_database_accession' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 25 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 26 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 27 4 'Structure model' '_pdbx_struct_conn_angle.value' 28 4 'Structure model' '_struct_conn.pdbx_dist_value' 29 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 30 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 31 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 32 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 33 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 34 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 35 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 36 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 37 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 38 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 39 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 40 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 41 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 42 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 43 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 44 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 19.2549 -1.6516 41.9305 0.5738 0.3196 0.1365 -0.0053 0.0147 -0.0030 5.3062 3.3065 1.3073 3.5475 0.1906 0.9709 -0.0317 0.2660 -0.6413 0.0555 0.0052 -0.2822 -0.0310 -0.0116 0.0265 'X-RAY DIFFRACTION' 2 ? refined 26.6523 0.6572 41.9564 0.5923 0.4016 0.1602 -0.0311 0.0275 0.0094 5.4700 2.8271 0.2525 3.7221 0.7867 0.4447 0.0682 -0.0464 0.0926 0.0787 -0.0649 -0.1133 -0.0184 0.0959 -0.0033 'X-RAY DIFFRACTION' 3 ? refined 34.8972 8.5403 33.5797 0.6185 0.5622 0.0483 -0.0176 0.0598 0.0081 6.5816 7.1303 7.3495 0.7845 2.1365 3.9443 0.1034 0.6352 0.1695 -0.1792 -0.4025 -0.2161 -0.1606 -0.6558 0.2991 'X-RAY DIFFRACTION' 4 ? refined 8.0054 -1.8128 32.2973 0.5988 0.2801 0.1907 -0.0161 0.0002 0.1006 4.1301 5.9675 3.1234 0.1403 0.4650 -0.0555 -0.1445 0.3910 0.7191 -0.1532 -0.0370 0.2462 -0.2634 -0.0798 0.1814 'X-RAY DIFFRACTION' 5 ? refined 22.0628 -0.4840 36.8457 0.3497 0.4019 0.5805 -0.0005 0.0243 0.1985 16.6211 16.4970 3.5789 2.6835 -1.7191 -0.6369 -0.0195 0.2382 0.0747 0.1399 -0.0903 -0.5857 0.0095 0.0510 0.1097 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 20 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B 1 B 20 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 C 471 C 522 ? . . . . ? 'X-RAY DIFFRACTION' 4 3 C 601 C 602 ? . . . . ? 'X-RAY DIFFRACTION' 5 4 D 470 D 523 ? . . . . ? 'X-RAY DIFFRACTION' 6 4 D 601 D 602 ? . . . . ? 'X-RAY DIFFRACTION' 7 5 B 101 B 101 ? . . . . ? 'X-RAY DIFFRACTION' 8 5 C 603 C 603 ? . . . . ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345dtb 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.7.0029 ? 3 DENZO 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NH2 _pdbx_validate_close_contact.auth_asym_id_1 D _pdbx_validate_close_contact.auth_comp_id_1 ARG _pdbx_validate_close_contact.auth_seq_id_1 471 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 D _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 715 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.16 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "C5'" _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 DT _pdbx_validate_rmsd_angle.auth_seq_id_1 1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C4'" _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 DT _pdbx_validate_rmsd_angle.auth_seq_id_2 1 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 "O4'" _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 DT _pdbx_validate_rmsd_angle.auth_seq_id_3 1 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 118.95 _pdbx_validate_rmsd_angle.angle_target_value 109.80 _pdbx_validate_rmsd_angle.angle_deviation 9.15 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.10 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id HIS _pdbx_validate_torsion.auth_asym_id D _pdbx_validate_torsion.auth_seq_id 522 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -120.00 _pdbx_validate_torsion.psi 75.53 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 D LYS 523 ? CG ? D LYS 57 CG 2 1 Y 1 D LYS 523 ? CD ? D LYS 57 CD 3 1 Y 1 D LYS 523 ? CE ? D LYS 57 CE 4 1 Y 1 D LYS 523 ? NZ ? D LYS 57 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C GLY 467 ? C GLY 1 2 1 Y 1 C SER 468 ? C SER 2 3 1 Y 1 C SER 469 ? C SER 3 4 1 Y 1 C SER 470 ? C SER 4 5 1 Y 1 C LYS 523 ? C LYS 57 6 1 Y 1 D GLY 467 ? D GLY 1 7 1 Y 1 D SER 468 ? D SER 2 8 1 Y 1 D SER 469 ? D SER 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 CL CL CL N N 58 CYS N N N N 59 CYS CA C N R 60 CYS C C N N 61 CYS O O N N 62 CYS CB C N N 63 CYS SG S N N 64 CYS OXT O N N 65 CYS H H N N 66 CYS H2 H N N 67 CYS HA H N N 68 CYS HB2 H N N 69 CYS HB3 H N N 70 CYS HG H N N 71 CYS HXT H N N 72 DA OP3 O N N 73 DA P P N N 74 DA OP1 O N N 75 DA OP2 O N N 76 DA "O5'" O N N 77 DA "C5'" C N N 78 DA "C4'" C N R 79 DA "O4'" O N N 80 DA "C3'" C N S 81 DA "O3'" O N N 82 DA "C2'" C N N 83 DA "C1'" C N R 84 DA N9 N Y N 85 DA C8 C Y N 86 DA N7 N Y N 87 DA C5 C Y N 88 DA C6 C Y N 89 DA N6 N N N 90 DA N1 N Y N 91 DA C2 C Y N 92 DA N3 N Y N 93 DA C4 C Y N 94 DA HOP3 H N N 95 DA HOP2 H N N 96 DA "H5'" H N N 97 DA "H5''" H N N 98 DA "H4'" H N N 99 DA "H3'" H N N 100 DA "HO3'" H N N 101 DA "H2'" H N N 102 DA "H2''" H N N 103 DA "H1'" H N N 104 DA H8 H N N 105 DA H61 H N N 106 DA H62 H N N 107 DA H2 H N N 108 DC OP3 O N N 109 DC P P N N 110 DC OP1 O N N 111 DC OP2 O N N 112 DC "O5'" O N N 113 DC "C5'" C N N 114 DC "C4'" C N R 115 DC "O4'" O N N 116 DC "C3'" C N S 117 DC "O3'" O N N 118 DC "C2'" C N N 119 DC "C1'" C N R 120 DC N1 N N N 121 DC C2 C N N 122 DC O2 O N N 123 DC N3 N N N 124 DC C4 C N N 125 DC N4 N N N 126 DC C5 C N N 127 DC C6 C N N 128 DC HOP3 H N N 129 DC HOP2 H N N 130 DC "H5'" H N N 131 DC "H5''" H N N 132 DC "H4'" H N N 133 DC "H3'" H N N 134 DC "HO3'" H N N 135 DC "H2'" H N N 136 DC "H2''" H N N 137 DC "H1'" H N N 138 DC H41 H N N 139 DC H42 H N N 140 DC H5 H N N 141 DC H6 H N N 142 DG OP3 O N N 143 DG P P N N 144 DG OP1 O N N 145 DG OP2 O N N 146 DG "O5'" O N N 147 DG "C5'" C N N 148 DG "C4'" C N R 149 DG "O4'" O N N 150 DG "C3'" C N S 151 DG "O3'" O N N 152 DG "C2'" C N N 153 DG "C1'" C N R 154 DG N9 N Y N 155 DG C8 C Y N 156 DG N7 N Y N 157 DG C5 C Y N 158 DG C6 C N N 159 DG O6 O N N 160 DG N1 N N N 161 DG C2 C N N 162 DG N2 N N N 163 DG N3 N N N 164 DG C4 C Y N 165 DG HOP3 H N N 166 DG HOP2 H N N 167 DG "H5'" H N N 168 DG "H5''" H N N 169 DG "H4'" H N N 170 DG "H3'" H N N 171 DG "HO3'" H N N 172 DG "H2'" H N N 173 DG "H2''" H N N 174 DG "H1'" H N N 175 DG H8 H N N 176 DG H1 H N N 177 DG H21 H N N 178 DG H22 H N N 179 DT OP3 O N N 180 DT P P N N 181 DT OP1 O N N 182 DT OP2 O N N 183 DT "O5'" O N N 184 DT "C5'" C N N 185 DT "C4'" C N R 186 DT "O4'" O N N 187 DT "C3'" C N S 188 DT "O3'" O N N 189 DT "C2'" C N N 190 DT "C1'" C N R 191 DT N1 N N N 192 DT C2 C N N 193 DT O2 O N N 194 DT N3 N N N 195 DT C4 C N N 196 DT O4 O N N 197 DT C5 C N N 198 DT C7 C N N 199 DT C6 C N N 200 DT HOP3 H N N 201 DT HOP2 H N N 202 DT "H5'" H N N 203 DT "H5''" H N N 204 DT "H4'" H N N 205 DT "H3'" H N N 206 DT "HO3'" H N N 207 DT "H2'" H N N 208 DT "H2''" H N N 209 DT "H1'" H N N 210 DT H3 H N N 211 DT H71 H N N 212 DT H72 H N N 213 DT H73 H N N 214 DT H6 H N N 215 GLN N N N N 216 GLN CA C N S 217 GLN C C N N 218 GLN O O N N 219 GLN CB C N N 220 GLN CG C N N 221 GLN CD C N N 222 GLN OE1 O N N 223 GLN NE2 N N N 224 GLN OXT O N N 225 GLN H H N N 226 GLN H2 H N N 227 GLN HA H N N 228 GLN HB2 H N N 229 GLN HB3 H N N 230 GLN HG2 H N N 231 GLN HG3 H N N 232 GLN HE21 H N N 233 GLN HE22 H N N 234 GLN HXT H N N 235 GLU N N N N 236 GLU CA C N S 237 GLU C C N N 238 GLU O O N N 239 GLU CB C N N 240 GLU CG C N N 241 GLU CD C N N 242 GLU OE1 O N N 243 GLU OE2 O N N 244 GLU OXT O N N 245 GLU H H N N 246 GLU H2 H N N 247 GLU HA H N N 248 GLU HB2 H N N 249 GLU HB3 H N N 250 GLU HG2 H N N 251 GLU HG3 H N N 252 GLU HE2 H N N 253 GLU HXT H N N 254 GLY N N N N 255 GLY CA C N N 256 GLY C C N N 257 GLY O O N N 258 GLY OXT O N N 259 GLY H H N N 260 GLY H2 H N N 261 GLY HA2 H N N 262 GLY HA3 H N N 263 GLY HXT H N N 264 HIS N N N N 265 HIS CA C N S 266 HIS C C N N 267 HIS O O N N 268 HIS CB C N N 269 HIS CG C Y N 270 HIS ND1 N Y N 271 HIS CD2 C Y N 272 HIS CE1 C Y N 273 HIS NE2 N Y N 274 HIS OXT O N N 275 HIS H H N N 276 HIS H2 H N N 277 HIS HA H N N 278 HIS HB2 H N N 279 HIS HB3 H N N 280 HIS HD1 H N N 281 HIS HD2 H N N 282 HIS HE1 H N N 283 HIS HE2 H N N 284 HIS HXT H N N 285 HOH O O N N 286 HOH H1 H N N 287 HOH H2 H N N 288 ILE N N N N 289 ILE CA C N S 290 ILE C C N N 291 ILE O O N N 292 ILE CB C N S 293 ILE CG1 C N N 294 ILE CG2 C N N 295 ILE CD1 C N N 296 ILE OXT O N N 297 ILE H H N N 298 ILE H2 H N N 299 ILE HA H N N 300 ILE HB H N N 301 ILE HG12 H N N 302 ILE HG13 H N N 303 ILE HG21 H N N 304 ILE HG22 H N N 305 ILE HG23 H N N 306 ILE HD11 H N N 307 ILE HD12 H N N 308 ILE HD13 H N N 309 ILE HXT H N N 310 LEU N N N N 311 LEU CA C N S 312 LEU C C N N 313 LEU O O N N 314 LEU CB C N N 315 LEU CG C N N 316 LEU CD1 C N N 317 LEU CD2 C N N 318 LEU OXT O N N 319 LEU H H N N 320 LEU H2 H N N 321 LEU HA H N N 322 LEU HB2 H N N 323 LEU HB3 H N N 324 LEU HG H N N 325 LEU HD11 H N N 326 LEU HD12 H N N 327 LEU HD13 H N N 328 LEU HD21 H N N 329 LEU HD22 H N N 330 LEU HD23 H N N 331 LEU HXT H N N 332 LYS N N N N 333 LYS CA C N S 334 LYS C C N N 335 LYS O O N N 336 LYS CB C N N 337 LYS CG C N N 338 LYS CD C N N 339 LYS CE C N N 340 LYS NZ N N N 341 LYS OXT O N N 342 LYS H H N N 343 LYS H2 H N N 344 LYS HA H N N 345 LYS HB2 H N N 346 LYS HB3 H N N 347 LYS HG2 H N N 348 LYS HG3 H N N 349 LYS HD2 H N N 350 LYS HD3 H N N 351 LYS HE2 H N N 352 LYS HE3 H N N 353 LYS HZ1 H N N 354 LYS HZ2 H N N 355 LYS HZ3 H N N 356 LYS HXT H N N 357 PHE N N N N 358 PHE CA C N S 359 PHE C C N N 360 PHE O O N N 361 PHE CB C N N 362 PHE CG C Y N 363 PHE CD1 C Y N 364 PHE CD2 C Y N 365 PHE CE1 C Y N 366 PHE CE2 C Y N 367 PHE CZ C Y N 368 PHE OXT O N N 369 PHE H H N N 370 PHE H2 H N N 371 PHE HA H N N 372 PHE HB2 H N N 373 PHE HB3 H N N 374 PHE HD1 H N N 375 PHE HD2 H N N 376 PHE HE1 H N N 377 PHE HE2 H N N 378 PHE HZ H N N 379 PHE HXT H N N 380 PRO N N N N 381 PRO CA C N S 382 PRO C C N N 383 PRO O O N N 384 PRO CB C N N 385 PRO CG C N N 386 PRO CD C N N 387 PRO OXT O N N 388 PRO H H N N 389 PRO HA H N N 390 PRO HB2 H N N 391 PRO HB3 H N N 392 PRO HG2 H N N 393 PRO HG3 H N N 394 PRO HD2 H N N 395 PRO HD3 H N N 396 PRO HXT H N N 397 SER N N N N 398 SER CA C N S 399 SER C C N N 400 SER O O N N 401 SER CB C N N 402 SER OG O N N 403 SER OXT O N N 404 SER H H N N 405 SER H2 H N N 406 SER HA H N N 407 SER HB2 H N N 408 SER HB3 H N N 409 SER HG H N N 410 SER HXT H N N 411 THR N N N N 412 THR CA C N S 413 THR C C N N 414 THR O O N N 415 THR CB C N R 416 THR OG1 O N N 417 THR CG2 C N N 418 THR OXT O N N 419 THR H H N N 420 THR H2 H N N 421 THR HA H N N 422 THR HB H N N 423 THR HG1 H N N 424 THR HG21 H N N 425 THR HG22 H N N 426 THR HG23 H N N 427 THR HXT H N N 428 TYR N N N N 429 TYR CA C N S 430 TYR C C N N 431 TYR O O N N 432 TYR CB C N N 433 TYR CG C Y N 434 TYR CD1 C Y N 435 TYR CD2 C Y N 436 TYR CE1 C Y N 437 TYR CE2 C Y N 438 TYR CZ C Y N 439 TYR OH O N N 440 TYR OXT O N N 441 TYR H H N N 442 TYR H2 H N N 443 TYR HA H N N 444 TYR HB2 H N N 445 TYR HB3 H N N 446 TYR HD1 H N N 447 TYR HD2 H N N 448 TYR HE1 H N N 449 TYR HE2 H N N 450 TYR HH H N N 451 TYR HXT H N N 452 ZN ZN ZN N N 453 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 CYS N CA sing N N 55 CYS N H sing N N 56 CYS N H2 sing N N 57 CYS CA C sing N N 58 CYS CA CB sing N N 59 CYS CA HA sing N N 60 CYS C O doub N N 61 CYS C OXT sing N N 62 CYS CB SG sing N N 63 CYS CB HB2 sing N N 64 CYS CB HB3 sing N N 65 CYS SG HG sing N N 66 CYS OXT HXT sing N N 67 DA OP3 P sing N N 68 DA OP3 HOP3 sing N N 69 DA P OP1 doub N N 70 DA P OP2 sing N N 71 DA P "O5'" sing N N 72 DA OP2 HOP2 sing N N 73 DA "O5'" "C5'" sing N N 74 DA "C5'" "C4'" sing N N 75 DA "C5'" "H5'" sing N N 76 DA "C5'" "H5''" sing N N 77 DA "C4'" "O4'" sing N N 78 DA "C4'" "C3'" sing N N 79 DA "C4'" "H4'" sing N N 80 DA "O4'" "C1'" sing N N 81 DA "C3'" "O3'" sing N N 82 DA "C3'" "C2'" sing N N 83 DA "C3'" "H3'" sing N N 84 DA "O3'" "HO3'" sing N N 85 DA "C2'" "C1'" sing N N 86 DA "C2'" "H2'" sing N N 87 DA "C2'" "H2''" sing N N 88 DA "C1'" N9 sing N N 89 DA "C1'" "H1'" sing N N 90 DA N9 C8 sing Y N 91 DA N9 C4 sing Y N 92 DA C8 N7 doub Y N 93 DA C8 H8 sing N N 94 DA N7 C5 sing Y N 95 DA C5 C6 sing Y N 96 DA C5 C4 doub Y N 97 DA C6 N6 sing N N 98 DA C6 N1 doub Y N 99 DA N6 H61 sing N N 100 DA N6 H62 sing N N 101 DA N1 C2 sing Y N 102 DA C2 N3 doub Y N 103 DA C2 H2 sing N N 104 DA N3 C4 sing Y N 105 DC OP3 P sing N N 106 DC OP3 HOP3 sing N N 107 DC P OP1 doub N N 108 DC P OP2 sing N N 109 DC P "O5'" sing N N 110 DC OP2 HOP2 sing N N 111 DC "O5'" "C5'" sing N N 112 DC "C5'" "C4'" sing N N 113 DC "C5'" "H5'" sing N N 114 DC "C5'" "H5''" sing N N 115 DC "C4'" "O4'" sing N N 116 DC "C4'" "C3'" sing N N 117 DC "C4'" "H4'" sing N N 118 DC "O4'" "C1'" sing N N 119 DC "C3'" "O3'" sing N N 120 DC "C3'" "C2'" sing N N 121 DC "C3'" "H3'" sing N N 122 DC "O3'" "HO3'" sing N N 123 DC "C2'" "C1'" sing N N 124 DC "C2'" "H2'" sing N N 125 DC "C2'" "H2''" sing N N 126 DC "C1'" N1 sing N N 127 DC "C1'" "H1'" sing N N 128 DC N1 C2 sing N N 129 DC N1 C6 sing N N 130 DC C2 O2 doub N N 131 DC C2 N3 sing N N 132 DC N3 C4 doub N N 133 DC C4 N4 sing N N 134 DC C4 C5 sing N N 135 DC N4 H41 sing N N 136 DC N4 H42 sing N N 137 DC C5 C6 doub N N 138 DC C5 H5 sing N N 139 DC C6 H6 sing N N 140 DG OP3 P sing N N 141 DG OP3 HOP3 sing N N 142 DG P OP1 doub N N 143 DG P OP2 sing N N 144 DG P "O5'" sing N N 145 DG OP2 HOP2 sing N N 146 DG "O5'" "C5'" sing N N 147 DG "C5'" "C4'" sing N N 148 DG "C5'" "H5'" sing N N 149 DG "C5'" "H5''" sing N N 150 DG "C4'" "O4'" sing N N 151 DG "C4'" "C3'" sing N N 152 DG "C4'" "H4'" sing N N 153 DG "O4'" "C1'" sing N N 154 DG "C3'" "O3'" sing N N 155 DG "C3'" "C2'" sing N N 156 DG "C3'" "H3'" sing N N 157 DG "O3'" "HO3'" sing N N 158 DG "C2'" "C1'" sing N N 159 DG "C2'" "H2'" sing N N 160 DG "C2'" "H2''" sing N N 161 DG "C1'" N9 sing N N 162 DG "C1'" "H1'" sing N N 163 DG N9 C8 sing Y N 164 DG N9 C4 sing Y N 165 DG C8 N7 doub Y N 166 DG C8 H8 sing N N 167 DG N7 C5 sing Y N 168 DG C5 C6 sing N N 169 DG C5 C4 doub Y N 170 DG C6 O6 doub N N 171 DG C6 N1 sing N N 172 DG N1 C2 sing N N 173 DG N1 H1 sing N N 174 DG C2 N2 sing N N 175 DG C2 N3 doub N N 176 DG N2 H21 sing N N 177 DG N2 H22 sing N N 178 DG N3 C4 sing N N 179 DT OP3 P sing N N 180 DT OP3 HOP3 sing N N 181 DT P OP1 doub N N 182 DT P OP2 sing N N 183 DT P "O5'" sing N N 184 DT OP2 HOP2 sing N N 185 DT "O5'" "C5'" sing N N 186 DT "C5'" "C4'" sing N N 187 DT "C5'" "H5'" sing N N 188 DT "C5'" "H5''" sing N N 189 DT "C4'" "O4'" sing N N 190 DT "C4'" "C3'" sing N N 191 DT "C4'" "H4'" sing N N 192 DT "O4'" "C1'" sing N N 193 DT "C3'" "O3'" sing N N 194 DT "C3'" "C2'" sing N N 195 DT "C3'" "H3'" sing N N 196 DT "O3'" "HO3'" sing N N 197 DT "C2'" "C1'" sing N N 198 DT "C2'" "H2'" sing N N 199 DT "C2'" "H2''" sing N N 200 DT "C1'" N1 sing N N 201 DT "C1'" "H1'" sing N N 202 DT N1 C2 sing N N 203 DT N1 C6 sing N N 204 DT C2 O2 doub N N 205 DT C2 N3 sing N N 206 DT N3 C4 sing N N 207 DT N3 H3 sing N N 208 DT C4 O4 doub N N 209 DT C4 C5 sing N N 210 DT C5 C7 sing N N 211 DT C5 C6 doub N N 212 DT C7 H71 sing N N 213 DT C7 H72 sing N N 214 DT C7 H73 sing N N 215 DT C6 H6 sing N N 216 GLN N CA sing N N 217 GLN N H sing N N 218 GLN N H2 sing N N 219 GLN CA C sing N N 220 GLN CA CB sing N N 221 GLN CA HA sing N N 222 GLN C O doub N N 223 GLN C OXT sing N N 224 GLN CB CG sing N N 225 GLN CB HB2 sing N N 226 GLN CB HB3 sing N N 227 GLN CG CD sing N N 228 GLN CG HG2 sing N N 229 GLN CG HG3 sing N N 230 GLN CD OE1 doub N N 231 GLN CD NE2 sing N N 232 GLN NE2 HE21 sing N N 233 GLN NE2 HE22 sing N N 234 GLN OXT HXT sing N N 235 GLU N CA sing N N 236 GLU N H sing N N 237 GLU N H2 sing N N 238 GLU CA C sing N N 239 GLU CA CB sing N N 240 GLU CA HA sing N N 241 GLU C O doub N N 242 GLU C OXT sing N N 243 GLU CB CG sing N N 244 GLU CB HB2 sing N N 245 GLU CB HB3 sing N N 246 GLU CG CD sing N N 247 GLU CG HG2 sing N N 248 GLU CG HG3 sing N N 249 GLU CD OE1 doub N N 250 GLU CD OE2 sing N N 251 GLU OE2 HE2 sing N N 252 GLU OXT HXT sing N N 253 GLY N CA sing N N 254 GLY N H sing N N 255 GLY N H2 sing N N 256 GLY CA C sing N N 257 GLY CA HA2 sing N N 258 GLY CA HA3 sing N N 259 GLY C O doub N N 260 GLY C OXT sing N N 261 GLY OXT HXT sing N N 262 HIS N CA sing N N 263 HIS N H sing N N 264 HIS N H2 sing N N 265 HIS CA C sing N N 266 HIS CA CB sing N N 267 HIS CA HA sing N N 268 HIS C O doub N N 269 HIS C OXT sing N N 270 HIS CB CG sing N N 271 HIS CB HB2 sing N N 272 HIS CB HB3 sing N N 273 HIS CG ND1 sing Y N 274 HIS CG CD2 doub Y N 275 HIS ND1 CE1 doub Y N 276 HIS ND1 HD1 sing N N 277 HIS CD2 NE2 sing Y N 278 HIS CD2 HD2 sing N N 279 HIS CE1 NE2 sing Y N 280 HIS CE1 HE1 sing N N 281 HIS NE2 HE2 sing N N 282 HIS OXT HXT sing N N 283 HOH O H1 sing N N 284 HOH O H2 sing N N 285 ILE N CA sing N N 286 ILE N H sing N N 287 ILE N H2 sing N N 288 ILE CA C sing N N 289 ILE CA CB sing N N 290 ILE CA HA sing N N 291 ILE C O doub N N 292 ILE C OXT sing N N 293 ILE CB CG1 sing N N 294 ILE CB CG2 sing N N 295 ILE CB HB sing N N 296 ILE CG1 CD1 sing N N 297 ILE CG1 HG12 sing N N 298 ILE CG1 HG13 sing N N 299 ILE CG2 HG21 sing N N 300 ILE CG2 HG22 sing N N 301 ILE CG2 HG23 sing N N 302 ILE CD1 HD11 sing N N 303 ILE CD1 HD12 sing N N 304 ILE CD1 HD13 sing N N 305 ILE OXT HXT sing N N 306 LEU N CA sing N N 307 LEU N H sing N N 308 LEU N H2 sing N N 309 LEU CA C sing N N 310 LEU CA CB sing N N 311 LEU CA HA sing N N 312 LEU C O doub N N 313 LEU C OXT sing N N 314 LEU CB CG sing N N 315 LEU CB HB2 sing N N 316 LEU CB HB3 sing N N 317 LEU CG CD1 sing N N 318 LEU CG CD2 sing N N 319 LEU CG HG sing N N 320 LEU CD1 HD11 sing N N 321 LEU CD1 HD12 sing N N 322 LEU CD1 HD13 sing N N 323 LEU CD2 HD21 sing N N 324 LEU CD2 HD22 sing N N 325 LEU CD2 HD23 sing N N 326 LEU OXT HXT sing N N 327 LYS N CA sing N N 328 LYS N H sing N N 329 LYS N H2 sing N N 330 LYS CA C sing N N 331 LYS CA CB sing N N 332 LYS CA HA sing N N 333 LYS C O doub N N 334 LYS C OXT sing N N 335 LYS CB CG sing N N 336 LYS CB HB2 sing N N 337 LYS CB HB3 sing N N 338 LYS CG CD sing N N 339 LYS CG HG2 sing N N 340 LYS CG HG3 sing N N 341 LYS CD CE sing N N 342 LYS CD HD2 sing N N 343 LYS CD HD3 sing N N 344 LYS CE NZ sing N N 345 LYS CE HE2 sing N N 346 LYS CE HE3 sing N N 347 LYS NZ HZ1 sing N N 348 LYS NZ HZ2 sing N N 349 LYS NZ HZ3 sing N N 350 LYS OXT HXT sing N N 351 PHE N CA sing N N 352 PHE N H sing N N 353 PHE N H2 sing N N 354 PHE CA C sing N N 355 PHE CA CB sing N N 356 PHE CA HA sing N N 357 PHE C O doub N N 358 PHE C OXT sing N N 359 PHE CB CG sing N N 360 PHE CB HB2 sing N N 361 PHE CB HB3 sing N N 362 PHE CG CD1 doub Y N 363 PHE CG CD2 sing Y N 364 PHE CD1 CE1 sing Y N 365 PHE CD1 HD1 sing N N 366 PHE CD2 CE2 doub Y N 367 PHE CD2 HD2 sing N N 368 PHE CE1 CZ doub Y N 369 PHE CE1 HE1 sing N N 370 PHE CE2 CZ sing Y N 371 PHE CE2 HE2 sing N N 372 PHE CZ HZ sing N N 373 PHE OXT HXT sing N N 374 PRO N CA sing N N 375 PRO N CD sing N N 376 PRO N H sing N N 377 PRO CA C sing N N 378 PRO CA CB sing N N 379 PRO CA HA sing N N 380 PRO C O doub N N 381 PRO C OXT sing N N 382 PRO CB CG sing N N 383 PRO CB HB2 sing N N 384 PRO CB HB3 sing N N 385 PRO CG CD sing N N 386 PRO CG HG2 sing N N 387 PRO CG HG3 sing N N 388 PRO CD HD2 sing N N 389 PRO CD HD3 sing N N 390 PRO OXT HXT sing N N 391 SER N CA sing N N 392 SER N H sing N N 393 SER N H2 sing N N 394 SER CA C sing N N 395 SER CA CB sing N N 396 SER CA HA sing N N 397 SER C O doub N N 398 SER C OXT sing N N 399 SER CB OG sing N N 400 SER CB HB2 sing N N 401 SER CB HB3 sing N N 402 SER OG HG sing N N 403 SER OXT HXT sing N N 404 THR N CA sing N N 405 THR N H sing N N 406 THR N H2 sing N N 407 THR CA C sing N N 408 THR CA CB sing N N 409 THR CA HA sing N N 410 THR C O doub N N 411 THR C OXT sing N N 412 THR CB OG1 sing N N 413 THR CB CG2 sing N N 414 THR CB HB sing N N 415 THR OG1 HG1 sing N N 416 THR CG2 HG21 sing N N 417 THR CG2 HG22 sing N N 418 THR CG2 HG23 sing N N 419 THR OXT HXT sing N N 420 TYR N CA sing N N 421 TYR N H sing N N 422 TYR N H2 sing N N 423 TYR CA C sing N N 424 TYR CA CB sing N N 425 TYR CA HA sing N N 426 TYR C O doub N N 427 TYR C OXT sing N N 428 TYR CB CG sing N N 429 TYR CB HB2 sing N N 430 TYR CB HB3 sing N N 431 TYR CG CD1 doub Y N 432 TYR CG CD2 sing Y N 433 TYR CD1 CE1 sing Y N 434 TYR CD1 HD1 sing N N 435 TYR CD2 CE2 doub Y N 436 TYR CD2 HD2 sing N N 437 TYR CE1 CZ doub Y N 438 TYR CE1 HE1 sing N N 439 TYR CE2 CZ sing Y N 440 TYR CE2 HE2 sing N N 441 TYR CZ OH sing N N 442 TYR OH HH sing N N 443 TYR OXT HXT sing N N 444 # _ndb_struct_conf_na.entry_id 4IS1 _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 3 1_555 B DA 20 1_555 -0.025 -0.072 0.314 -5.745 -8.628 0.999 1 A_DT3:DA20_B A 3 ? B 20 ? 20 1 1 A DG 4 1_555 B DC 19 1_555 -0.344 -0.228 0.105 -4.392 -7.588 0.288 2 A_DG4:DC19_B A 4 ? B 19 ? 19 1 1 A DC 5 1_555 B DG 18 1_555 0.080 -0.154 0.216 -1.368 -11.543 -0.986 3 A_DC5:DG18_B A 5 ? B 18 ? 19 1 1 A DA 6 1_555 B DT 17 1_555 0.136 -0.166 0.069 -0.357 -5.802 6.177 4 A_DA6:DT17_B A 6 ? B 17 ? 20 1 1 A DG 7 1_555 B DC 16 1_555 -0.194 -0.114 0.016 12.383 -4.534 -0.100 5 A_DG7:DC16_B A 7 ? B 16 ? 19 1 1 A DA 8 1_555 B DT 15 1_555 0.317 -0.222 -0.183 5.413 -20.465 -4.890 6 A_DA8:DT15_B A 8 ? B 15 ? 20 1 1 A DA 9 1_555 B DT 14 1_555 -0.047 -0.152 0.197 3.721 -18.651 1.056 7 A_DA9:DT14_B A 9 ? B 14 ? 20 1 1 A DT 10 1_555 B DA 13 1_555 0.043 -0.003 0.276 -3.086 -16.968 -2.009 8 A_DT10:DA13_B A 10 ? B 13 ? 20 1 1 A DC 11 1_555 B DG 12 1_555 0.519 -0.298 -0.203 6.559 -7.416 1.719 9 A_DC11:DG12_B A 11 ? B 12 ? 19 1 1 A DG 12 1_555 B DC 11 1_555 -0.041 -0.112 0.000 1.434 -19.168 4.330 10 A_DG12:DC11_B A 12 ? B 11 ? 19 1 1 A DA 13 1_555 B DT 10 1_555 0.136 -0.108 0.139 1.458 -15.796 -0.784 11 A_DA13:DT10_B A 13 ? B 10 ? 20 1 1 A DT 14 1_555 B DA 9 1_555 0.003 -0.153 0.193 2.911 -15.789 -0.634 12 A_DT14:DA9_B A 14 ? B 9 ? 20 1 1 A DT 15 1_555 B DA 8 1_555 0.005 -0.101 -0.238 1.216 -14.794 -3.200 13 A_DT15:DA8_B A 15 ? B 8 ? 20 1 1 A DC 16 1_555 B DG 7 1_555 -0.072 -0.059 -0.058 -14.445 -5.104 1.351 14 A_DC16:DG7_B A 16 ? B 7 ? 19 1 1 A DT 17 1_555 B DA 6 1_555 0.083 -0.194 0.031 -1.132 -3.237 2.310 15 A_DT17:DA6_B A 17 ? B 6 ? 20 1 1 A DG 18 1_555 B DC 5 1_555 0.196 -0.160 -0.031 -3.119 -8.086 -9.008 16 A_DG18:DC5_B A 18 ? B 5 ? 19 1 1 A DC 19 1_555 B DG 4 1_555 0.316 -0.247 -0.174 6.025 -5.588 -1.720 17 A_DC19:DG4_B A 19 ? B 4 ? 19 1 1 A DA 20 1_555 B DT 3 1_555 0.073 -0.140 0.115 5.794 -9.675 3.080 18 A_DA20:DT3_B A 20 ? B 3 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 3 1_555 B DA 20 1_555 A DG 4 1_555 B DC 19 1_555 -0.059 -0.996 3.165 0.233 5.193 27.981 -3.145 0.170 2.935 10.623 -0.477 28.450 1 AA_DT3DG4:DC19DA20_BB A 3 ? B 20 ? A 4 ? B 19 ? 1 A DG 4 1_555 B DC 19 1_555 A DC 5 1_555 B DG 18 1_555 -0.981 -0.461 3.257 -1.911 -0.214 34.339 -0.747 1.360 3.308 -0.362 3.233 34.391 2 AA_DG4DC5:DG18DC19_BB A 4 ? B 19 ? A 5 ? B 18 ? 1 A DC 5 1_555 B DG 18 1_555 A DA 6 1_555 B DT 17 1_555 1.268 0.797 3.242 4.665 3.442 38.348 0.770 -1.325 3.423 5.203 -7.053 38.768 3 AA_DC5DA6:DT17DG18_BB A 5 ? B 18 ? A 6 ? B 17 ? 1 A DA 6 1_555 B DT 17 1_555 A DG 7 1_555 B DC 16 1_555 -0.035 0.306 3.142 0.186 1.728 28.511 0.242 0.111 3.155 3.505 -0.377 28.562 4 AA_DA6DG7:DC16DT17_BB A 6 ? B 17 ? A 7 ? B 16 ? 1 A DG 7 1_555 B DC 16 1_555 A DA 8 1_555 B DT 15 1_555 -0.907 0.450 3.562 -0.876 -1.359 43.148 0.757 1.139 3.563 -1.848 1.191 43.177 5 AA_DG7DA8:DT15DC16_BB A 7 ? B 16 ? A 8 ? B 15 ? 1 A DA 8 1_555 B DT 15 1_555 A DA 9 1_555 B DT 14 1_555 0.061 0.116 3.258 -4.770 -5.308 40.924 0.724 -0.590 3.193 -7.523 6.760 41.516 6 AA_DA8DA9:DT14DT15_BB A 8 ? B 15 ? A 9 ? B 14 ? 1 A DA 9 1_555 B DT 14 1_555 A DT 10 1_555 B DA 13 1_555 -0.246 -0.238 3.442 -1.597 -5.849 34.257 0.548 0.153 3.442 -9.833 2.686 34.774 7 AA_DA9DT10:DA13DT14_BB A 9 ? B 14 ? A 10 ? B 13 ? 1 A DT 10 1_555 B DA 13 1_555 A DC 11 1_555 B DG 12 1_555 1.051 1.884 3.199 7.898 0.929 37.889 2.729 -0.600 3.386 1.412 -12.002 38.684 8 AA_DT10DC11:DG12DA13_BB A 10 ? B 13 ? A 11 ? B 12 ? 1 A DC 11 1_555 B DG 12 1_555 A DG 12 1_555 B DC 11 1_555 -0.610 1.725 3.529 -3.333 3.784 36.602 2.153 0.462 3.722 5.990 5.276 36.936 9 AA_DC11DG12:DC11DG12_BB A 11 ? B 12 ? A 12 ? B 11 ? 1 A DG 12 1_555 B DC 11 1_555 A DA 13 1_555 B DT 10 1_555 0.018 0.046 3.282 -2.556 1.000 35.906 -0.069 -0.393 3.273 1.620 4.138 36.007 10 AA_DG12DA13:DT10DC11_BB A 12 ? B 11 ? A 13 ? B 10 ? 1 A DA 13 1_555 B DT 10 1_555 A DT 14 1_555 B DA 9 1_555 0.015 -0.672 3.270 -0.775 -6.984 31.285 0.069 -0.170 3.337 -12.749 1.415 32.046 11 AA_DA13DT14:DA9DT10_BB A 13 ? B 10 ? A 14 ? B 9 ? 1 A DT 14 1_555 B DA 9 1_555 A DT 15 1_555 B DA 8 1_555 -0.164 -0.243 3.301 4.477 -4.749 38.448 0.217 0.794 3.269 -7.148 -6.739 38.977 12 AA_DT14DT15:DA8DA9_BB A 14 ? B 9 ? A 15 ? B 8 ? 1 A DT 15 1_555 B DA 8 1_555 A DC 16 1_555 B DG 7 1_555 0.729 0.083 3.668 2.359 -0.595 42.701 0.181 -0.733 3.700 -0.817 -3.237 42.767 13 AA_DT15DC16:DG7DA8_BB A 15 ? B 8 ? A 16 ? B 7 ? 1 A DC 16 1_555 B DG 7 1_555 A DT 17 1_555 B DA 6 1_555 0.001 0.294 3.159 -0.423 -2.257 33.363 0.871 -0.070 3.133 -3.925 0.735 33.440 14 AA_DC16DT17:DA6DG7_BB A 16 ? B 7 ? A 17 ? B 6 ? 1 A DT 17 1_555 B DA 6 1_555 A DG 18 1_555 B DC 5 1_555 -1.280 0.349 3.329 -4.608 6.367 37.852 -0.296 1.339 3.467 9.687 7.010 38.631 15 AA_DT17DG18:DC5DA6_BB A 17 ? B 6 ? A 18 ? B 5 ? 1 A DG 18 1_555 B DC 5 1_555 A DC 19 1_555 B DG 4 1_555 1.041 -0.022 3.079 2.418 -1.389 31.813 0.201 -1.474 3.146 -2.528 -4.400 31.931 16 AA_DG18DC19:DG4DC5_BB A 18 ? B 5 ? A 19 ? B 4 ? 1 A DC 19 1_555 B DG 4 1_555 A DA 20 1_555 B DT 3 1_555 -0.106 -0.648 3.346 -0.684 8.214 30.808 -2.675 0.068 3.077 15.125 1.260 31.865 17 AA_DC19DA20:DT3DG4_BB A 19 ? B 4 ? A 20 ? B 3 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 'CHLORIDE ION' CL 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4F2J _pdbx_initial_refinement_model.details ? #