HEADER OXIDOREDUCTASE 20-JAN-13 4IUB TITLE CRYSTAL STRUCTURE OF AN O2-TOLERANT [NIFE]-HYDROGENASE FROM RALSTONIA TITLE 2 EUTROPHA IN ITS AS-ISOLATED FORM - OXIDIZED STATE 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UPTAKE HYDROGENASE LARGE SUBUNIT; COMPND 3 CHAIN: L; COMPND 4 FRAGMENT: UNP RESIDUES 1-603; COMPND 5 SYNONYM: HYDROGENLYASE, MEMBRANE-BOUND HYDROGENASE LARGE SUBUNIT, COMPND 6 HOXG; COMPND 7 EC: 1.12.5.1; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: UPTAKE HYDROGENASE SMALL SUBUNIT; COMPND 11 CHAIN: S; COMPND 12 FRAGMENT: UNP RESIDUES 44-360; COMPND 13 SYNONYM: HYDROGENLYASE, MEMBRANE-BOUND HYDROGENASE SMALL SUBUNIT, COMPND 14 HOXK; COMPND 15 EC: 1.12.5.1; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RALSTONIA EUTROPHA; SOURCE 3 ORGANISM_TAXID: 381666; SOURCE 4 STRAIN: ATCC 17699 / H16 / DSM 428 / STANIER 337; SOURCE 5 GENE: HOXG, PHG002; SOURCE 6 EXPRESSION_SYSTEM: RALSTONIA EUTROPHA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 381666; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ATCC 17699 / H16 / DSM 428 / STANIER 337; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: RALSTONIA EUTROPHA; SOURCE 12 ORGANISM_TAXID: 381666; SOURCE 13 STRAIN: ATCC 17699 / H16 / DSM 428 / STANIER 337; SOURCE 14 GENE: HOXK, PHG001; SOURCE 15 EXPRESSION_SYSTEM: RALSTONIA EUTROPHA; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 381666; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: ATCC 17699 / H16 / DSM 428 / STANIER 337; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS [NIFE] HYDROGENASE, KNALLGAS BACTERIA, PROTEOBACTERIA, AEROBIC KEYWDS 2 HYDROGEN BACTERIA, HYDROGEN CATALYSIS, METALLOENZYME, METALLOPROTEIN KEYWDS 3 CATALYTIC CENTER, NICKEL-IRON COFACTOR, BIMETALLIC, NI-FE ACTIVE KEYWDS 4 SITE, IRON-SULFUR CLUSTER, [4FE-3S] CLUSTER, [3FE-4S] CLUSTER, [4FE- KEYWDS 5 4S] CLUSTER, REDUCED STATE, OXIDIZED STATE, OXYGEN-TOLERANT KEYWDS 6 HYDROGENASE, MEMBRANE-BOUND, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR S.FRIELINGSDORF,A.SCHMIDT,J.FRITSCH,O.LENZ,P.SCHEERER REVDAT 4 20-SEP-23 4IUB 1 REMARK SEQADV LINK REVDAT 3 15-NOV-17 4IUB 1 REMARK REVDAT 2 14-MAY-14 4IUB 1 JRNL REVDAT 1 02-APR-14 4IUB 0 JRNL AUTH S.FRIELINGSDORF,J.FRITSCH,A.SCHMIDT,M.HAMMER,J.LOWENSTEIN, JRNL AUTH 2 E.SIEBERT,V.PELMENSCHIKOV,T.JAENICKE,J.KALMS,Y.RIPPERS, JRNL AUTH 3 F.LENDZIAN,I.ZEBGER,C.TEUTLOFF,M.KAUPP,R.BITTL, JRNL AUTH 4 P.HILDEBRANDT,B.FRIEDRICH,O.LENZ,P.SCHEERER JRNL TITL REVERSIBLE [4FE-3S] CLUSTER MORPHING IN AN O2-TOLERANT JRNL TITL 2 [NIFE] HYDROGENASE. JRNL REF NAT.CHEM.BIOL. V. 10 378 2014 JRNL REFN ISSN 1552-4450 JRNL PMID 24705592 JRNL DOI 10.1038/NCHEMBIO.1500 REMARK 2 REMARK 2 RESOLUTION. 1.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.05 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 102094 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.130 REMARK 3 R VALUE (WORKING SET) : 0.128 REMARK 3 FREE R VALUE : 0.166 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5374 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.61 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.65 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7076 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.85 REMARK 3 BIN R VALUE (WORKING SET) : 0.1810 REMARK 3 BIN FREE R VALUE SET COUNT : 372 REMARK 3 BIN FREE R VALUE : 0.2350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6785 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 602 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : -0.07000 REMARK 3 B33 (A**2) : 0.08000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.976 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.966 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7128 ; 0.008 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9808 ; 1.287 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 892 ; 5.515 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 324 ;33.468 ;23.642 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1147 ;11.139 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 49 ;16.741 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1038 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5466 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 7128 ; 2.777 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 170 ;26.007 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 7374 ; 8.434 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 2 L 603 REMARK 3 ORIGIN FOR THE GROUP (A): -2.2147 -2.9569 -6.6686 REMARK 3 T TENSOR REMARK 3 T11: 0.0162 T22: 0.0233 REMARK 3 T33: 0.0356 T12: 0.0021 REMARK 3 T13: -0.0031 T23: -0.0052 REMARK 3 L TENSOR REMARK 3 L11: 0.1585 L22: 0.2988 REMARK 3 L33: 0.0926 L12: 0.1632 REMARK 3 L13: -0.0109 L23: -0.0249 REMARK 3 S TENSOR REMARK 3 S11: -0.0052 S12: -0.0036 S13: 0.0285 REMARK 3 S21: 0.0068 S22: 0.0111 S23: 0.0573 REMARK 3 S31: 0.0244 S32: -0.0010 S33: -0.0059 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : S 5 S 268 REMARK 3 ORIGIN FOR THE GROUP (A): 13.3030 5.5884 -24.2936 REMARK 3 T TENSOR REMARK 3 T11: 0.0332 T22: 0.0477 REMARK 3 T33: 0.0172 T12: 0.0005 REMARK 3 T13: 0.0051 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 0.1561 L22: 0.1102 REMARK 3 L33: 0.1726 L12: 0.0612 REMARK 3 L13: -0.0277 L23: -0.0166 REMARK 3 S TENSOR REMARK 3 S11: -0.0130 S12: 0.0408 S13: 0.0269 REMARK 3 S21: -0.0491 S22: 0.0088 S23: -0.0123 REMARK 3 S31: 0.0170 S32: 0.0368 S33: 0.0042 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 801 L 1224 REMARK 3 RESIDUE RANGE : S 1101 S 1277 REMARK 3 ORIGIN FOR THE GROUP (A): 4.5401 -1.1151 -9.0575 REMARK 3 T TENSOR REMARK 3 T11: 0.0140 T22: 0.0173 REMARK 3 T33: 0.0122 T12: 0.0028 REMARK 3 T13: -0.0024 T23: -0.0056 REMARK 3 L TENSOR REMARK 3 L11: 0.1605 L22: 0.2903 REMARK 3 L33: 0.0983 L12: 0.0833 REMARK 3 L13: -0.0075 L23: -0.0141 REMARK 3 S TENSOR REMARK 3 S11: 0.0019 S12: -0.0063 S13: 0.0181 REMARK 3 S21: 0.0010 S22: 0.0033 S23: 0.0159 REMARK 3 S31: 0.0192 S32: 0.0119 S33: -0.0053 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : S 1001 S 1001 REMARK 3 ORIGIN FOR THE GROUP (A): 20.0705 24.5013 -16.2447 REMARK 3 T TENSOR REMARK 3 T11: 0.0342 T22: 0.0819 REMARK 3 T33: 0.0383 T12: -0.0162 REMARK 3 T13: -0.0018 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 5.0932 L22: 3.0234 REMARK 3 L33: 4.3060 L12: 0.5516 REMARK 3 L13: 3.2981 L23: 1.1964 REMARK 3 S TENSOR REMARK 3 S11: -0.0533 S12: -0.1891 S13: 0.0198 REMARK 3 S21: -0.2678 S22: 0.1523 S23: -0.0258 REMARK 3 S31: -0.0779 S32: 0.2499 S33: -0.0990 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : S 1002 S 1002 REMARK 3 ORIGIN FOR THE GROUP (A): 15.4192 14.5142 -18.1126 REMARK 3 T TENSOR REMARK 3 T11: 0.0223 T22: 0.0468 REMARK 3 T33: 0.0094 T12: -0.0055 REMARK 3 T13: -0.0018 T23: 0.0019 REMARK 3 L TENSOR REMARK 3 L11: 6.8661 L22: 9.7277 REMARK 3 L33: 8.1804 L12: 6.4892 REMARK 3 L13: 3.4710 L23: 2.4367 REMARK 3 S TENSOR REMARK 3 S11: -0.0119 S12: 0.1636 S13: -0.0271 REMARK 3 S21: -0.0169 S22: 0.1600 S23: 0.0261 REMARK 3 S31: -0.0398 S32: 0.1192 S33: -0.1481 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : S 1003 S 1003 REMARK 3 ORIGIN FOR THE GROUP (A): 12.6765 2.1663 -17.9827 REMARK 3 T TENSOR REMARK 3 T11: 0.1103 T22: 0.0962 REMARK 3 T33: 0.0718 T12: 0.0184 REMARK 3 T13: 0.0049 T23: -0.0011 REMARK 3 L TENSOR REMARK 3 L11: 12.5891 L22: 1.7496 REMARK 3 L33: 19.4297 L12: 1.8703 REMARK 3 L13: 12.1950 L23: 5.1595 REMARK 3 S TENSOR REMARK 3 S11: 0.0934 S12: -0.1912 S13: 0.0358 REMARK 3 S21: -0.0424 S22: 0.0018 S23: -0.0507 REMARK 3 S31: -0.0471 S32: -0.1278 S33: -0.0952 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 701 L 701 REMARK 3 ORIGIN FOR THE GROUP (A): 3.8076 -2.0998 -6.8789 REMARK 3 T TENSOR REMARK 3 T11: 0.0422 T22: 0.0394 REMARK 3 T33: 0.0340 T12: -0.0007 REMARK 3 T13: -0.0106 T23: -0.0063 REMARK 3 L TENSOR REMARK 3 L11: 11.8767 L22: 8.0955 REMARK 3 L33: 2.1020 L12: 0.0650 REMARK 3 L13: -4.6777 L23: 1.4243 REMARK 3 S TENSOR REMARK 3 S11: 0.0997 S12: 0.2085 S13: -0.0477 REMARK 3 S21: 0.0449 S22: -0.1225 S23: -0.0751 REMARK 3 S31: -0.0246 S32: -0.1082 S33: 0.0228 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 702 L 702 REMARK 3 ORIGIN FOR THE GROUP (A): 13.3301 -7.7168 -1.9439 REMARK 3 T TENSOR REMARK 3 T11: 0.0175 T22: 0.0450 REMARK 3 T33: 0.0056 T12: 0.0143 REMARK 3 T13: 0.0085 T23: -0.0000 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0000 REMARK 3 L33: 0.0000 L12: 0.0000 REMARK 3 L13: 0.0000 L23: 0.0000 REMARK 3 S TENSOR REMARK 3 S11: 0.0000 S12: 0.0000 S13: 0.0000 REMARK 3 S21: 0.0000 S22: 0.0000 S23: 0.0000 REMARK 3 S31: 0.0000 S32: 0.0000 S33: -0.0000 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 703 L 707 REMARK 3 RESIDUE RANGE : S 1004 S 1004 REMARK 3 ORIGIN FOR THE GROUP (A): 14.2811 4.5090 -4.1523 REMARK 3 T TENSOR REMARK 3 T11: 0.0142 T22: 0.0222 REMARK 3 T33: 0.0459 T12: 0.0074 REMARK 3 T13: 0.0158 T23: -0.0029 REMARK 3 L TENSOR REMARK 3 L11: 0.1010 L22: 0.2833 REMARK 3 L33: 0.3266 L12: -0.1095 REMARK 3 L13: 0.0200 L23: -0.1840 REMARK 3 S TENSOR REMARK 3 S11: -0.0179 S12: 0.0103 S13: -0.0663 REMARK 3 S21: 0.0564 S22: 0.0118 S23: 0.0727 REMARK 3 S31: -0.0174 S32: 0.0279 S33: 0.0061 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : S 1005 S 1005 REMARK 3 ORIGIN FOR THE GROUP (A): 21.9742 3.8549 -19.0865 REMARK 3 T TENSOR REMARK 3 T11: 0.0178 T22: 0.0318 REMARK 3 T33: 0.0014 T12: -0.0233 REMARK 3 T13: 0.0044 T23: -0.0051 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0000 REMARK 3 L33: 0.0000 L12: 0.0000 REMARK 3 L13: 0.0000 L23: 0.0000 REMARK 3 S TENSOR REMARK 3 S11: 0.0000 S12: 0.0000 S13: 0.0000 REMARK 3 S21: 0.0000 S22: 0.0000 S23: 0.0000 REMARK 3 S31: 0.0000 S32: 0.0000 S33: -0.0000 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4IUB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000077218. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91842 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 107786 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.610 REMARK 200 RESOLUTION RANGE LOW (A) : 34.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : 0.05900 REMARK 200 FOR THE DATA SET : 14.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.61 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.47500 REMARK 200 R SYM FOR SHELL (I) : 0.47500 REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3RGW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20-30% PEG3350, 100 MM BIS-TRIS REMARK 280 METHANE, PH 5.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 283K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.45150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.40900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.69500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.40900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.45150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.69500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -128.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, S REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET L 1 REMARK 465 MET S 1 REMARK 465 GLU S 2 REMARK 465 THR S 3 REMARK 465 LYS S 4 REMARK 465 GLY S 269 REMARK 465 ILE S 270 REMARK 465 SER S 271 REMARK 465 GLN S 272 REMARK 465 PHE S 273 REMARK 465 GLY S 274 REMARK 465 VAL S 275 REMARK 465 GLU S 276 REMARK 465 ALA S 277 REMARK 465 ASN S 278 REMARK 465 ALA S 279 REMARK 465 ASP S 280 REMARK 465 LYS S 281 REMARK 465 ILE S 282 REMARK 465 GLY S 283 REMARK 465 GLY S 284 REMARK 465 THR S 285 REMARK 465 ALA S 286 REMARK 465 SER S 287 REMARK 465 VAL S 288 REMARK 465 VAL S 289 REMARK 465 VAL S 290 REMARK 465 GLY S 291 REMARK 465 ALA S 292 REMARK 465 ALA S 293 REMARK 465 VAL S 294 REMARK 465 THR S 295 REMARK 465 ALA S 296 REMARK 465 HIS S 297 REMARK 465 ALA S 298 REMARK 465 ALA S 299 REMARK 465 ALA S 300 REMARK 465 SER S 301 REMARK 465 ALA S 302 REMARK 465 ILE S 303 REMARK 465 LYS S 304 REMARK 465 ARG S 305 REMARK 465 ALA S 306 REMARK 465 SER S 307 REMARK 465 LYS S 308 REMARK 465 LYS S 309 REMARK 465 ASN S 310 REMARK 465 GLU S 311 REMARK 465 THR S 312 REMARK 465 SER S 313 REMARK 465 GLY S 314 REMARK 465 SER S 315 REMARK 465 GLU S 316 REMARK 465 HIS S 317 REMARK 465 ARG S 318 REMARK 465 SER S 319 REMARK 465 ALA S 320 REMARK 465 TRP S 321 REMARK 465 SER S 322 REMARK 465 HIS S 323 REMARK 465 PRO S 324 REMARK 465 GLN S 325 REMARK 465 PHE S 326 REMARK 465 GLU S 327 REMARK 465 LYS S 328 REMARK 465 ARG S 329 REMARK 465 SER S 330 REMARK 465 ALA S 331 REMARK 465 TRP S 332 REMARK 465 SER S 333 REMARK 465 HIS S 334 REMARK 465 PRO S 335 REMARK 465 GLN S 336 REMARK 465 PHE S 337 REMARK 465 GLU S 338 REMARK 465 LYS S 339 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER L 152 88.93 -153.99 REMARK 500 SER L 152 88.60 -153.81 REMARK 500 ASP L 244 8.82 -155.53 REMARK 500 THR L 301 -61.18 -124.20 REMARK 500 GLN L 344 -84.07 -101.70 REMARK 500 ASN L 373 77.53 -152.00 REMARK 500 ALA L 394 -142.42 -121.19 REMARK 500 TYR L 396 18.81 -146.22 REMARK 500 SER L 447 -59.51 -128.84 REMARK 500 PRO L 584 37.92 -81.10 REMARK 500 ASP S 45 108.59 -166.97 REMARK 500 CYS S 120 -148.48 51.66 REMARK 500 ARG S 234 -171.16 62.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG L 702 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU L 56 OE2 REMARK 620 2 CYS L 549 O 95.7 REMARK 620 3 HOH L 823 O 89.7 174.6 REMARK 620 4 HOH L 842 O 176.6 87.3 87.3 REMARK 620 5 HOH L 900 O 87.1 90.8 90.3 94.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NFV L 701 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS L 75 SG REMARK 620 2 NFV L 701 O4 167.2 REMARK 620 3 CYS L 78 SG 97.9 83.4 REMARK 620 4 CYS L 597 SG 87.2 93.0 172.1 REMARK 620 5 CYS L 600 SG 107.8 84.9 73.8 98.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NFV L 701 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS L 78 SG REMARK 620 2 NFV L 701 C2 97.7 REMARK 620 3 NFV L 701 O4 81.7 88.5 REMARK 620 4 NFV L 701 C1 99.7 89.7 177.9 REMARK 620 5 NFV L 701 C3 164.8 90.6 85.9 93.0 REMARK 620 6 CYS L 600 SG 79.4 176.9 90.1 91.8 92.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 S3F S1003 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS S 17 SG REMARK 620 2 S3F S1003 S1 117.9 REMARK 620 3 S3F S1003 S2 105.0 105.9 REMARK 620 4 S3F S1003 O1 71.7 169.2 74.7 REMARK 620 5 CYS S 19 SG 101.2 99.8 128.1 72.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 S3F S1003 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS S 19 SG REMARK 620 2 S3F S1003 S1 99.8 REMARK 620 3 CYS S 20 N 96.0 143.7 REMARK 620 4 CYS S 20 SG 119.1 111.3 88.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 S3F S1003 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS S 115 SG REMARK 620 2 S3F S1003 S3 113.5 REMARK 620 3 S3F S1003 S1 116.2 114.7 REMARK 620 4 S3F S1003 S2 99.3 100.4 110.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 S3F S1003 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS S 120 SG REMARK 620 2 S3F S1003 S3 118.2 REMARK 620 3 S3F S1003 S2 113.1 103.0 REMARK 620 4 CYS S 149 SG 100.7 114.8 106.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 S1001 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS S 187 ND1 REMARK 620 2 SF4 S1001 S2 106.8 REMARK 620 3 SF4 S1001 S3 113.8 103.0 REMARK 620 4 SF4 S1001 S4 121.3 106.4 103.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 S1001 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS S 190 SG REMARK 620 2 SF4 S1001 S1 119.4 REMARK 620 3 SF4 S1001 S2 118.0 100.7 REMARK 620 4 SF4 S1001 S4 109.7 104.9 102.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 S1001 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS S 215 SG REMARK 620 2 SF4 S1001 S1 121.9 REMARK 620 3 SF4 S1001 S2 119.5 103.9 REMARK 620 4 SF4 S1001 S3 98.7 105.4 105.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 S1001 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS S 221 SG REMARK 620 2 SF4 S1001 S1 115.9 REMARK 620 3 SF4 S1001 S3 117.5 102.1 REMARK 620 4 SF4 S1001 S4 112.3 105.3 102.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S S1002 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS S 230 SG REMARK 620 2 F3S S1002 S1 114.2 REMARK 620 3 F3S S1002 S3 117.6 104.2 REMARK 620 4 F3S S1002 S4 104.8 113.1 102.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S S1002 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS S 249 SG REMARK 620 2 F3S S1002 S1 115.6 REMARK 620 3 F3S S1002 S2 109.8 113.7 REMARK 620 4 F3S S1002 S3 110.9 102.6 103.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S S1002 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS S 252 SG REMARK 620 2 F3S S1002 S2 111.0 REMARK 620 3 F3S S1002 S3 115.9 104.7 REMARK 620 4 F3S S1002 S4 107.6 114.5 103.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NFV L 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG L 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 L 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 L 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 L 705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 L 706 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 L 707 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SF4 S 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE F3S S 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE S3F S 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 S 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL S 1005 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IUC RELATED DB: PDB REMARK 900 RELATED ID: 4IUD RELATED DB: PDB DBREF 4IUB L 1 603 UNP P31891 MBHL_CUPNH 1 603 DBREF 4IUB S 1 317 UNP P31892 MBHS_CUPNH 44 360 SEQADV 4IUB ARG S 318 UNP P31892 EXPRESSION TAG SEQADV 4IUB SER S 319 UNP P31892 EXPRESSION TAG SEQADV 4IUB ALA S 320 UNP P31892 EXPRESSION TAG SEQADV 4IUB TRP S 321 UNP P31892 EXPRESSION TAG SEQADV 4IUB SER S 322 UNP P31892 EXPRESSION TAG SEQADV 4IUB HIS S 323 UNP P31892 EXPRESSION TAG SEQADV 4IUB PRO S 324 UNP P31892 EXPRESSION TAG SEQADV 4IUB GLN S 325 UNP P31892 EXPRESSION TAG SEQADV 4IUB PHE S 326 UNP P31892 EXPRESSION TAG SEQADV 4IUB GLU S 327 UNP P31892 EXPRESSION TAG SEQADV 4IUB LYS S 328 UNP P31892 EXPRESSION TAG SEQADV 4IUB ARG S 329 UNP P31892 EXPRESSION TAG SEQADV 4IUB SER S 330 UNP P31892 EXPRESSION TAG SEQADV 4IUB ALA S 331 UNP P31892 EXPRESSION TAG SEQADV 4IUB TRP S 332 UNP P31892 EXPRESSION TAG SEQADV 4IUB SER S 333 UNP P31892 EXPRESSION TAG SEQADV 4IUB HIS S 334 UNP P31892 EXPRESSION TAG SEQADV 4IUB PRO S 335 UNP P31892 EXPRESSION TAG SEQADV 4IUB GLN S 336 UNP P31892 EXPRESSION TAG SEQADV 4IUB PHE S 337 UNP P31892 EXPRESSION TAG SEQADV 4IUB GLU S 338 UNP P31892 EXPRESSION TAG SEQADV 4IUB LYS S 339 UNP P31892 EXPRESSION TAG SEQRES 1 L 603 MET SER ALA TYR ALA THR GLN GLY PHE ASN LEU ASP ASP SEQRES 2 L 603 ARG GLY ARG ARG ILE VAL VAL ASP PRO VAL THR ARG ILE SEQRES 3 L 603 GLU GLY HIS MET ARG CYS GLU VAL ASN VAL ASP ALA ASN SEQRES 4 L 603 ASN VAL ILE ARG ASN ALA VAL SER THR GLY THR MET TRP SEQRES 5 L 603 ARG GLY LEU GLU VAL ILE LEU LYS GLY ARG ASP PRO ARG SEQRES 6 L 603 ASP ALA TRP ALA PHE VAL GLU ARG ILE CYS GLY VAL CYS SEQRES 7 L 603 THR GLY CYS HIS ALA LEU ALA SER VAL ARG ALA VAL GLU SEQRES 8 L 603 ASN ALA LEU ASP ILE ARG ILE PRO LYS ASN ALA HIS LEU SEQRES 9 L 603 ILE ARG GLU ILE MET ALA LYS THR LEU GLN VAL HIS ASP SEQRES 10 L 603 HIS ALA VAL HIS PHE TYR HIS LEU HIS ALA LEU ASP TRP SEQRES 11 L 603 VAL ASP VAL MET SER ALA LEU LYS ALA ASP PRO LYS ARG SEQRES 12 L 603 THR SER GLU LEU GLN GLN LEU VAL SER PRO ALA HIS PRO SEQRES 13 L 603 LEU SER SER ALA GLY TYR PHE ARG ASP ILE GLN ASN ARG SEQRES 14 L 603 LEU LYS ARG PHE VAL GLU SER GLY GLN LEU GLY PRO PHE SEQRES 15 L 603 MET ASN GLY TYR TRP GLY SER LYS ALA TYR VAL LEU PRO SEQRES 16 L 603 PRO GLU ALA ASN LEU MET ALA VAL THR HIS TYR LEU GLU SEQRES 17 L 603 ALA LEU ASP LEU GLN LYS GLU TRP VAL LYS ILE HIS THR SEQRES 18 L 603 ILE PHE GLY GLY LYS ASN PRO HIS PRO ASN TYR LEU VAL SEQRES 19 L 603 GLY GLY VAL PRO CYS ALA ILE ASN LEU ASP GLY ILE GLY SEQRES 20 L 603 ALA ALA SER ALA PRO VAL ASN MET GLU ARG LEU SER PHE SEQRES 21 L 603 VAL LYS ALA ARG ILE ASP GLU ILE ILE GLU PHE ASN LYS SEQRES 22 L 603 ASN VAL TYR VAL PRO ASP VAL LEU ALA ILE GLY THR LEU SEQRES 23 L 603 TYR LYS GLN ALA GLY TRP LEU TYR GLY GLY GLY LEU ALA SEQRES 24 L 603 ALA THR ASN VAL LEU ASP TYR GLY GLU TYR PRO ASN VAL SEQRES 25 L 603 ALA TYR ASN LYS SER THR ASP GLN LEU PRO GLY GLY ALA SEQRES 26 L 603 ILE LEU ASN GLY ASN TRP ASP GLU VAL PHE PRO VAL ASP SEQRES 27 L 603 PRO ARG ASP SER GLN GLN VAL GLN GLU PHE VAL SER HIS SEQRES 28 L 603 SER TRP TYR LYS TYR ALA ASP GLU SER VAL GLY LEU HIS SEQRES 29 L 603 PRO TRP ASP GLY VAL THR GLU PRO ASN TYR VAL LEU GLY SEQRES 30 L 603 ALA ASN THR LYS GLY THR ARG THR ARG ILE GLU GLN ILE SEQRES 31 L 603 ASP GLU SER ALA LYS TYR SER TRP ILE LYS SER PRO ARG SEQRES 32 L 603 TRP ARG GLY HIS ALA MET GLU VAL GLY PRO LEU SER ARG SEQRES 33 L 603 TYR ILE LEU ALA TYR ALA HIS ALA ARG SER GLY ASN LYS SEQRES 34 L 603 TYR ALA GLU ARG PRO LYS GLU GLN LEU GLU TYR SER ALA SEQRES 35 L 603 GLN MET ILE ASN SER ALA ILE PRO LYS ALA LEU GLY LEU SEQRES 36 L 603 PRO GLU THR GLN TYR THR LEU LYS GLN LEU LEU PRO SER SEQRES 37 L 603 THR ILE GLY ARG THR LEU ALA ARG ALA LEU GLU SER GLN SEQRES 38 L 603 TYR CYS GLY GLU MET MET HIS SER ASP TRP HIS ASP LEU SEQRES 39 L 603 VAL ALA ASN ILE ARG ALA GLY ASP THR ALA THR ALA ASN SEQRES 40 L 603 VAL ASP LYS TRP ASP PRO ALA THR TRP PRO LEU GLN ALA SEQRES 41 L 603 LYS GLY VAL GLY THR VAL ALA ALA PRO ARG GLY ALA LEU SEQRES 42 L 603 GLY HIS TRP ILE ARG ILE LYS ASP GLY ARG ILE GLU ASN SEQRES 43 L 603 TYR GLN CYS VAL VAL PRO THR THR TRP ASN GLY SER PRO SEQRES 44 L 603 ARG ASP TYR LYS GLY GLN ILE GLY ALA PHE GLU ALA SER SEQRES 45 L 603 LEU MET ASN THR PRO MET VAL ASN PRO GLU GLN PRO VAL SEQRES 46 L 603 GLU ILE LEU ARG THR LEU HIS SER PHE ASP PRO CYS LEU SEQRES 47 L 603 ALA CYS SER THR HIS SEQRES 1 S 339 MET GLU THR LYS PRO ARG THR PRO VAL LEU TRP LEU HIS SEQRES 2 S 339 GLY LEU GLU CYS THR CYS CYS SER GLU SER PHE ILE ARG SEQRES 3 S 339 SER ALA HIS PRO LEU ALA LYS ASP VAL VAL LEU SER MET SEQRES 4 S 339 ILE SER LEU ASP TYR ASP ASP THR LEU MET ALA ALA ALA SEQRES 5 S 339 GLY HIS GLN ALA GLU ALA ILE LEU GLU GLU ILE MET THR SEQRES 6 S 339 LYS TYR LYS GLY ASN TYR ILE LEU ALA VAL GLU GLY ASN SEQRES 7 S 339 PRO PRO LEU ASN GLN ASP GLY MET SER CYS ILE ILE GLY SEQRES 8 S 339 GLY ARG PRO PHE ILE GLU GLN LEU LYS TYR VAL ALA LYS SEQRES 9 S 339 ASP ALA LYS ALA ILE ILE SER TRP GLY SER CYS ALA SER SEQRES 10 S 339 TRP GLY CYS VAL GLN ALA ALA LYS PRO ASN PRO THR GLN SEQRES 11 S 339 ALA THR PRO VAL HIS LYS VAL ILE THR ASP LYS PRO ILE SEQRES 12 S 339 ILE LYS VAL PRO GLY CYS PRO PRO ILE ALA GLU VAL MET SEQRES 13 S 339 THR GLY VAL ILE THR TYR MET LEU THR PHE ASP ARG ILE SEQRES 14 S 339 PRO GLU LEU ASP ARG GLN GLY ARG PRO LYS MET PHE TYR SEQRES 15 S 339 SER GLN ARG ILE HIS ASP LYS CYS TYR ARG ARG PRO HIS SEQRES 16 S 339 PHE ASP ALA GLY GLN PHE VAL GLU GLU TRP ASP ASP GLU SEQRES 17 S 339 SER ALA ARG LYS GLY PHE CYS LEU TYR LYS MET GLY CYS SEQRES 18 S 339 LYS GLY PRO THR THR TYR ASN ALA CYS SER THR THR ARG SEQRES 19 S 339 TRP ASN GLU GLY THR SER PHE PRO ILE GLN SER GLY HIS SEQRES 20 S 339 GLY CYS ILE GLY CYS SER GLU ASP GLY PHE TRP ASP LYS SEQRES 21 S 339 GLY SER PHE TYR ASP ARG LEU THR GLY ILE SER GLN PHE SEQRES 22 S 339 GLY VAL GLU ALA ASN ALA ASP LYS ILE GLY GLY THR ALA SEQRES 23 S 339 SER VAL VAL VAL GLY ALA ALA VAL THR ALA HIS ALA ALA SEQRES 24 S 339 ALA SER ALA ILE LYS ARG ALA SER LYS LYS ASN GLU THR SEQRES 25 S 339 SER GLY SER GLU HIS ARG SER ALA TRP SER HIS PRO GLN SEQRES 26 S 339 PHE GLU LYS ARG SER ALA TRP SER HIS PRO GLN PHE GLU SEQRES 27 S 339 LYS HET NFV L 701 9 HET MG L 702 1 HET PO4 L 703 5 HET PO4 L 704 5 HET PO4 L 705 5 HET PO4 L 706 5 HET PO4 L 707 5 HET SF4 S1001 8 HET F3S S1002 7 HET S3F S1003 8 HET PO4 S1004 5 HET CL S1005 1 HETNAM NFV NI-FE OXIDIZED ACTIVE CENTER HETNAM MG MAGNESIUM ION HETNAM PO4 PHOSPHATE ION HETNAM SF4 IRON/SULFUR CLUSTER HETNAM F3S FE3-S4 CLUSTER HETNAM S3F OXIDIZED [FE4-S3] CLUSTER HETNAM CL CHLORIDE ION FORMUL 3 NFV C3 FE N2 NI O2 FORMUL 4 MG MG 2+ FORMUL 5 PO4 6(O4 P 3-) FORMUL 10 SF4 FE4 S4 FORMUL 11 F3S FE3 S4 FORMUL 12 S3F FE4 O S3 FORMUL 14 CL CL 1- FORMUL 15 HOH *602(H2 O) HELIX 1 1 GLY L 54 LEU L 59 1 6 HELIX 2 2 ASP L 66 ARG L 73 1 8 HELIX 3 3 GLY L 80 ASP L 95 1 16 HELIX 4 4 PRO L 99 LEU L 125 1 27 HELIX 5 5 HIS L 126 TRP L 130 5 5 HELIX 6 6 ASP L 132 LEU L 137 1 6 HELIX 7 7 ASP L 140 SER L 152 1 13 HELIX 8 8 SER L 159 SER L 176 1 18 HELIX 9 9 LEU L 179 MET L 183 5 5 HELIX 10 10 PRO L 195 VAL L 217 1 23 HELIX 11 11 VAL L 217 GLY L 225 1 9 HELIX 12 12 GLY L 247 ALA L 251 5 5 HELIX 13 13 ASN L 254 VAL L 275 1 22 HELIX 14 14 VAL L 275 ALA L 290 1 16 HELIX 15 15 GLY L 296 THR L 301 5 6 HELIX 16 16 ASN L 315 SER L 317 5 3 HELIX 17 17 HIS L 364 GLY L 368 5 5 HELIX 18 18 GLY L 412 SER L 426 1 15 HELIX 19 19 ASN L 428 TYR L 430 5 3 HELIX 20 20 ALA L 431 SER L 447 1 17 HELIX 21 21 SER L 447 GLY L 454 1 8 HELIX 22 22 THR L 461 LEU L 466 1 6 HELIX 23 23 SER L 468 ALA L 500 1 33 HELIX 24 24 ASP L 512 TRP L 516 5 5 HELIX 25 25 VAL L 551 SER L 558 1 8 HELIX 26 26 GLY L 567 MET L 574 1 8 HELIX 27 27 PRO L 584 PHE L 594 1 11 HELIX 28 28 CYS L 597 HIS L 603 1 7 HELIX 29 29 THR S 18 ARG S 26 1 9 HELIX 30 30 LEU S 31 MET S 39 1 9 HELIX 31 31 ALA S 52 TYR S 67 1 16 HELIX 32 32 ASN S 82 MET S 86 5 5 HELIX 33 33 PHE S 95 LYS S 104 1 10 HELIX 34 34 GLY S 113 TRP S 118 1 6 HELIX 35 35 CYS S 120 ALA S 124 5 5 HELIX 36 36 PRO S 133 VAL S 137 5 5 HELIX 37 37 ILE S 152 ASP S 167 1 16 HELIX 38 38 PRO S 178 SER S 183 1 6 HELIX 39 39 ARG S 185 CYS S 190 1 6 HELIX 40 40 ARG S 192 ALA S 198 1 7 HELIX 41 41 ASP S 207 LYS S 212 1 6 HELIX 42 42 LEU S 216 GLY S 220 5 5 HELIX 43 43 LYS S 222 THR S 226 5 5 HELIX 44 44 GLY S 256 LYS S 260 5 5 SHEET 1 A 2 TYR L 4 THR L 6 0 SHEET 2 A 2 PHE L 9 LEU L 11 -1 O PHE L 9 N THR L 6 SHEET 1 B 3 ARG L 16 VAL L 20 0 SHEET 2 B 3 MET L 30 VAL L 36 -1 O CYS L 32 N VAL L 20 SHEET 3 B 3 ILE L 42 GLY L 49 -1 O ARG L 43 N ASN L 35 SHEET 1 C 2 VAL L 303 ASP L 305 0 SHEET 2 C 2 GLY L 324 ILE L 326 -1 O GLY L 324 N ASP L 305 SHEET 1 D 2 GLU L 308 PRO L 310 0 SHEET 2 D 2 ASP L 319 LEU L 321 -1 O LEU L 321 N GLU L 308 SHEET 1 E 2 VAL L 345 PHE L 348 0 SHEET 2 E 2 SER L 401 TRP L 404 -1 O ARG L 403 N GLN L 346 SHEET 1 F 2 LYS L 381 THR L 383 0 SHEET 2 F 2 ARG L 386 GLN L 389 -1 O GLU L 388 N LYS L 381 SHEET 1 G 3 GLN L 519 ALA L 528 0 SHEET 2 G 3 GLY L 531 LYS L 540 -1 O ILE L 539 N ALA L 520 SHEET 3 G 3 ARG L 543 VAL L 550 -1 O GLU L 545 N ARG L 538 SHEET 1 H 5 ILE S 40 ASP S 45 0 SHEET 2 H 5 THR S 7 HIS S 13 1 N TRP S 11 O TYR S 44 SHEET 3 H 5 ILE S 72 GLU S 76 1 O ALA S 74 N LEU S 12 SHEET 4 H 5 ALA S 108 TRP S 112 1 O ILE S 110 N VAL S 75 SHEET 5 H 5 ILE S 143 VAL S 146 1 O ILE S 144 N SER S 111 SHEET 1 I 2 ILE S 89 ILE S 90 0 SHEET 2 I 2 ARG S 93 PRO S 94 -1 O ARG S 93 N ILE S 90 LINK OE2 GLU L 56 MG MG L 702 1555 1555 2.16 LINK SG CYS L 75 NI NFV L 701 1555 1555 2.19 LINK SG CYS L 78 FE NFV L 701 1555 1555 2.38 LINK SG CYS L 78 NI NFV L 701 1555 1555 2.40 LINK O CYS L 549 MG MG L 702 1555 1555 2.16 LINK SG CYS L 597 NI NFV L 701 1555 1555 2.22 LINK SG CYS L 600 FE NFV L 701 1555 1555 2.35 LINK SG CYS L 600 NI NFV L 701 1555 1555 2.62 LINK MG MG L 702 O HOH L 823 1555 1555 2.11 LINK MG MG L 702 O HOH L 842 1555 1555 2.11 LINK MG MG L 702 O HOH L 900 1555 1555 2.05 LINK SG CYS S 17 FE1 S3F S1003 1555 1555 2.26 LINK SG CYS S 19 FE1 S3F S1003 1555 1555 2.30 LINK SG CYS S 19 FE4 S3F S1003 1555 1555 2.43 LINK N CYS S 20 FE4 S3F S1003 1555 1555 2.11 LINK SG CYS S 20 FE4 S3F S1003 1555 1555 2.30 LINK SG CYS S 115 FE2 S3F S1003 1555 1555 2.31 LINK SG CYS S 120 FE3 S3F S1003 1555 1555 2.37 LINK SG CYS S 149 FE3 S3F S1003 1555 1555 2.29 LINK ND1 HIS S 187 FE1 SF4 S1001 1555 1555 2.06 LINK SG CYS S 190 FE3 SF4 S1001 1555 1555 2.29 LINK SG CYS S 215 FE4 SF4 S1001 1555 1555 2.29 LINK SG CYS S 221 FE2 SF4 S1001 1555 1555 2.29 LINK SG CYS S 230 FE3 F3S S1002 1555 1555 2.29 LINK SG CYS S 249 FE1 F3S S1002 1555 1555 2.30 LINK SG CYS S 252 FE4 F3S S1002 1555 1555 2.31 CISPEP 1 ASP L 21 PRO L 22 0 9.68 CISPEP 2 ASN L 227 PRO L 228 0 1.02 CISPEP 3 HIS S 29 PRO S 30 0 -0.93 CISPEP 4 LYS S 125 PRO S 126 0 4.00 CISPEP 5 CYS S 149 PRO S 150 0 -6.12 SITE 1 AC1 13 CYS L 75 CYS L 78 CYS L 81 HIS L 82 SITE 2 AC1 13 ALA L 528 PRO L 529 ARG L 530 LEU L 533 SITE 3 AC1 13 VAL L 551 PRO L 552 THR L 553 CYS L 597 SITE 4 AC1 13 CYS L 600 SITE 1 AC2 6 GLU L 56 CYS L 549 HIS L 603 HOH L 823 SITE 2 AC2 6 HOH L 842 HOH L 900 SITE 1 AC3 8 ARG L 88 ILE L 98 HIS L 103 ARG L 106 SITE 2 AC3 8 HOH L1119 HOH L1135 HOH L1141 HOH L1197 SITE 1 AC4 7 LYS L 521 ARG L 538 HOH L1068 HOH L1106 SITE 2 AC4 7 ARG S 168 ILE S 169 HOH S1275 SITE 1 AC5 5 GLY L 501 ASP L 502 THR L 503 ALA L 504 SITE 2 AC5 5 ARG S 211 SITE 1 AC6 5 GLY L 247 ALA L 248 ALA L 249 HOH L1142 SITE 2 AC6 5 HOH L1171 SITE 1 AC7 2 THR L 383 ARG L 384 SITE 1 AC8 6 HIS S 187 CYS S 190 ARG S 193 CYS S 215 SITE 2 AC8 6 LEU S 216 CYS S 221 SITE 1 AC9 9 LYS L 226 THR S 226 ASN S 228 CYS S 230 SITE 2 AC9 9 TRP S 235 PRO S 242 CYS S 249 ILE S 250 SITE 3 AC9 9 CYS S 252 SITE 1 BC1 11 ARG L 73 HIS L 229 CYS S 17 THR S 18 SITE 2 BC1 11 CYS S 19 CYS S 20 GLU S 76 SER S 114 SITE 3 BC1 11 CYS S 115 CYS S 120 CYS S 149 SITE 1 BC2 7 SER L 342 HOH L1055 HOH L1079 GLU S 171 SITE 2 BC2 7 LEU S 172 HOH S1187 HOH S1228 SITE 1 BC3 3 TRP S 118 CYS S 120 GLY S 256 CRYST1 72.903 95.390 118.818 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013717 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010483 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008416 0.00000