data_4IVH # _entry.id 4IVH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4IVH pdb_00004ivh 10.2210/pdb4ivh/pdb RCSB RCSB077260 ? ? WWPDB D_1000077260 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4IVH _pdbx_database_status.recvd_initial_deposition_date 2013-01-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pham, J.D.' 1 'Chim, N.' 2 'Goulding, C.W.' 3 'Nowick, J.S.' 4 # _citation.id primary _citation.title 'Structures of beta-Amyloid Peptide Oligomers' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year 2013 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 1520-5126 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pham, J.D.' 1 ? primary 'Chim, N.' 2 ? primary 'Goulding, C.W.' 3 ? primary 'Nowick, J.S.' 4 ? # _cell.entry_id 4IVH _cell.length_a 45.085 _cell.length_b 45.085 _cell.length_c 29.247 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4IVH _symmetry.space_group_name_H-M 'P 6 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 177 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'cyclo[Gln-Lys-Leu-Val-Phe-Phe-Ala-Glu-Asp-(delta-linked-Orn)-Hao-Lys-Hao-(p-bromoPhe)-Thr-(delta-linked-Orn)]' 2252.276 1 ? ? ? ? 2 non-polymer syn 'TERTIARY-BUTYL ALCOHOL' 74.122 1 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 4 water nat water 18.015 2 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'T(ORN)QKLVFFAED(ORN)(HAO)K(HAO)(4BF)' _entity_poly.pdbx_seq_one_letter_code_can TAQKLVFFAEDAXKXY _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 ORN n 1 3 GLN n 1 4 LYS n 1 5 LEU n 1 6 VAL n 1 7 PHE n 1 8 PHE n 1 9 ALA n 1 10 GLU n 1 11 ASP n 1 12 ORN n 1 13 HAO n 1 14 LYS n 1 15 HAO n 1 16 4BF n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name synthetic _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4IVH _struct_ref.pdbx_db_accession 4IVH _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4IVH _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 16 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 4IVH _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 16 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 4BF 'L-peptide linking' n 4-BROMO-L-PHENYLALANINE P-BROMO-L-PHENYLALANINE 'C9 H10 Br N O2' 244.085 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HAO peptide-like . '{[3-(hydrazinocarbonyl)-4-methoxyphenyl]amino}(oxo)acetic acid' ? 'C10 H11 N3 O5' 253.211 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 ORN 'L-peptide linking' n L-ornithine ? 'C5 H12 N2 O2' 132.161 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 TBU non-polymer . 'TERTIARY-BUTYL ALCOHOL' 2-METHYL-2-PROPANOL 'C4 H10 O' 74.122 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4IVH _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.90 _exptl_crystal.density_percent_sol 35.43 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.2 _exptl_crystal_grow.pdbx_details '0.5M Sodium citrate tribasic dihydrate, 35% tert-butanol, 1% PEG 3350 98K, pH 7.2, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2012-10-26 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.92 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.92 # _reflns.entry_id 4IVH _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0.00 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 1.77 _reflns.number_obs 1909 _reflns.number_all 38242 _reflns.percent_possible_obs 99.00 _reflns.pdbx_Rmerge_I_obs 0.123 _reflns.pdbx_Rsym_value 0.123 _reflns.pdbx_netI_over_sigmaI 22.00 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 20.00 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.770 1.830 100.000 0.456 ? ? 17.800 ? 178 ? ? ? ? 1 1 1.830 1.910 100.000 0.330 ? ? 20.500 ? 185 ? ? ? ? 2 1 1.910 1.990 100.000 0.211 ? ? 21.300 ? 185 ? ? ? ? 3 1 1.990 2.100 100.000 0.154 ? ? 21.400 ? 188 ? ? ? ? 4 1 2.100 2.230 100.000 0.137 ? ? 21.600 ? 188 ? ? ? ? 5 1 2.230 2.400 100.000 0.141 ? ? 21.200 ? 181 ? ? ? ? 6 1 2.400 2.6400 100.000 0.131 ? ? 21.100 ? 195 ? ? ? ? 7 1 2.6400 3.030 100.00 0.140 ? ? 20.700 ? 193 ? ? ? ? 8 1 3.030 3.810 98.500 0.113 ? ? 19.200 ? 210 ? ? ? ? 9 1 3.810 50.000 93.100 0.117 ? ? 16.100 ? 216 ? ? ? ? 10 1 # _refine.entry_id 4IVH _refine.ls_number_reflns_obs 1779 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.26 _refine.ls_d_res_high 1.77 _refine.ls_percent_reflns_obs 98.71 _refine.ls_R_factor_obs 0.22759 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.22422 _refine.ls_R_factor_R_free 0.27056 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 6.8 _refine.ls_number_reflns_R_free 130 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.940 _refine.correlation_coeff_Fo_to_Fc_free 0.901 _refine.B_iso_mean 42.122 _refine.aniso_B[1][1] 0.21 _refine.aniso_B[2][2] 0.21 _refine.aniso_B[3][3] -0.68 _refine.aniso_B[1][2] 0.21 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.161 _refine.pdbx_overall_ESU_R_Free 0.153 _refine.overall_SU_ML 0.110 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 8.737 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 155 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 2 _refine_hist.number_atoms_total 163 _refine_hist.d_res_high 1.77 _refine_hist.d_res_low 29.26 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.031 0.020 ? 174 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.024 0.020 ? 162 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2.960 2.221 ? 236 ? 'X-RAY DIFFRACTION' r_angle_other_deg 1.960 3.027 ? 348 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.893 5.000 ? 10 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 20.748 25.000 ? 6 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 16.349 15.000 ? 20 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.128 0.200 ? 19 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.027 0.021 ? 193 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.018 0.021 ? 42 ? 'X-RAY DIFFRACTION' r_mcbond_it 4.108 ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_other 3.647 ? ? ? ? 'X-RAY DIFFRACTION' p_mcangle_it 6.268 ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.772 _refine_ls_shell.d_res_low 1.818 _refine_ls_shell.number_reflns_R_work 127 _refine_ls_shell.R_factor_R_work 0.226 _refine_ls_shell.percent_reflns_obs 95.65 _refine_ls_shell.R_factor_R_free 0.332 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 5 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4IVH _struct.title 'Crystal structure of QKLVFFAED nonapeptide segment from amyloid beta incorporated into a macrocyclic beta-sheet template' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4IVH _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' _struct_keywords.text 'amyloid oligomer, DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A THR 1 C ? ? ? 1_555 A ORN 2 NE ? ? A THR 1 A ORN 2 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? A THR 1 N ? ? ? 1_555 A 4BF 16 C ? ? A THR 1 A 4BF 16 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale3 covale both ? A ORN 2 C ? ? ? 1_555 A GLN 3 N ? ? A ORN 2 A GLN 3 1_555 ? ? ? ? ? ? ? 1.356 ? ? covale4 covale both ? A ASP 11 C ? ? ? 1_555 A ORN 12 NE ? ? A ASP 11 A ORN 12 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale5 covale both ? A ORN 12 C ? ? ? 1_555 A HAO 13 N ? ? A ORN 12 A HAO 13 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale6 covale both ? A HAO 13 C ? ? ? 1_555 A LYS 14 N ? ? A HAO 13 A LYS 14 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale7 covale both ? A LYS 14 C ? ? ? 1_555 A HAO 15 N ? ? A LYS 14 A HAO 15 1_555 ? ? ? ? ? ? ? 1.311 ? ? covale8 covale both ? A HAO 15 C ? ? ? 1_555 A 4BF 16 N ? ? A HAO 15 A 4BF 16 1_555 ? ? ? ? ? ? ? 1.349 ? ? metalc1 metalc ? ? A 4BF 16 O ? ? ? 1_555 C NA . NA ? ? A 4BF 16 A NA 102 1_555 ? ? ? ? ? ? ? 2.784 ? ? metalc2 metalc ? ? C NA . NA ? ? ? 1_555 D HOH . O ? ? A NA 102 A HOH 201 1_555 ? ? ? ? ? ? ? 2.624 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A TBU 101 ? 2 'BINDING SITE FOR RESIDUE TBU A 101' AC2 Software A NA 102 ? 4 'BINDING SITE FOR RESIDUE NA A 102' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 HAO A 13 ? HAO A 13 . ? 10_665 ? 2 AC1 2 HAO A 13 ? HAO A 13 . ? 2_655 ? 3 AC2 4 4BF A 16 ? 4BF A 16 . ? 12_556 ? 4 AC2 4 4BF A 16 ? 4BF A 16 . ? 1_555 ? 5 AC2 4 HOH D . ? HOH A 201 . ? 1_555 ? 6 AC2 4 HOH D . ? HOH A 201 . ? 12_556 ? # _database_PDB_matrix.entry_id 4IVH _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4IVH _atom_sites.fract_transf_matrix[1][1] 0.022180 _atom_sites.fract_transf_matrix[1][2] 0.012806 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025612 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.034192 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C N NA O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 1 THR THR A . n A 1 2 ORN 2 2 2 ORN ORN A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 PHE 7 7 7 PHE PHE A . n A 1 8 PHE 8 8 8 PHE PHE A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 ORN 12 12 12 ORN ORN A . n A 1 13 HAO 13 13 13 HAO HAO A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 HAO 15 15 15 HAO HAO A . n A 1 16 4BF 16 16 16 4BF 4BF A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TBU 1 101 1 TBU TBU A . C 3 NA 1 102 1 NA NA A . D 4 HOH 1 201 1 HOH HOH A . D 4 HOH 2 202 2 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ORN 2 A ORN 2 ? ALA L-ORNITHINE 2 A ORN 12 A ORN 12 ? ALA L-ORNITHINE 3 A 4BF 16 A 4BF 16 ? TYR 4-BROMO-L-PHENYLALANINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1000 ? 1 MORE -8 ? 1 'SSA (A^2)' 3910 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_665 -x+1,-y+1,z -1.0000000000 0.0000000000 0.0000000000 22.5425000000 0.0000000000 -1.0000000000 0.0000000000 39.0447553296 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 7_556 y,x,-z+1 -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 29.2470000000 4 'crystal symmetry operation' 10_666 -y+1,-x+1,-z+1 0.5000000000 -0.8660254038 0.0000000000 22.5425000000 -0.8660254038 -0.5000000000 0.0000000000 39.0447553296 0.0000000000 0.0000000000 -1.0000000000 29.2470000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id NA _pdbx_struct_special_symmetry.auth_seq_id 102 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id NA _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id O _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id A _pdbx_struct_conn_angle.ptnr1_label_comp_id 4BF _pdbx_struct_conn_angle.ptnr1_label_seq_id 16 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id 4BF _pdbx_struct_conn_angle.ptnr1_auth_seq_id 16 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id NA _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id C _pdbx_struct_conn_angle.ptnr2_label_comp_id NA _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id NA _pdbx_struct_conn_angle.ptnr2_auth_seq_id 102 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id O _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id D _pdbx_struct_conn_angle.ptnr3_label_comp_id HOH _pdbx_struct_conn_angle.ptnr3_label_seq_id . _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id HOH _pdbx_struct_conn_angle.ptnr3_auth_seq_id 201 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 94.1 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-07-31 2 'Structure model' 2 0 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Atomic model' 3 2 'Structure model' 'Data collection' 4 2 'Structure model' 'Database references' 5 2 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' atom_site_anisotrop 3 2 'Structure model' chem_comp_atom 4 2 'Structure model' chem_comp_bond 5 2 'Structure model' database_2 6 2 'Structure model' pdbx_struct_conn_angle 7 2 'Structure model' pdbx_validate_main_chain_plane 8 2 'Structure model' pdbx_validate_polymer_linkage 9 2 'Structure model' pdbx_validate_rmsd_angle 10 2 'Structure model' struct_conn 11 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.auth_atom_id' 2 2 'Structure model' '_atom_site.label_atom_id' 3 2 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 4 2 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 5 2 'Structure model' '_database_2.pdbx_DOI' 6 2 'Structure model' '_database_2.pdbx_database_accession' 7 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 10 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 11 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 12 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 13 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 14 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 15 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 2 'Structure model' '_struct_conn.pdbx_dist_value' 18 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 19 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 20 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 21 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 22 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 25 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 26 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 28 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 29 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 30 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' 31 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 32 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 33 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 13.6780 _pdbx_refine_tls.origin_y 13.7252 _pdbx_refine_tls.origin_z 11.8313 _pdbx_refine_tls.T[1][1] 0.2130 _pdbx_refine_tls.T[2][2] 0.1475 _pdbx_refine_tls.T[3][3] 0.1331 _pdbx_refine_tls.T[1][2] -0.0904 _pdbx_refine_tls.T[1][3] -0.0118 _pdbx_refine_tls.T[2][3] -0.0106 _pdbx_refine_tls.L[1][1] 4.9613 _pdbx_refine_tls.L[2][2] 6.3782 _pdbx_refine_tls.L[3][3] 2.6304 _pdbx_refine_tls.L[1][2] 4.1642 _pdbx_refine_tls.L[1][3] -3.3200 _pdbx_refine_tls.L[2][3] -3.8240 _pdbx_refine_tls.S[1][1] -0.0334 _pdbx_refine_tls.S[1][2] 0.1235 _pdbx_refine_tls.S[1][3] -0.1415 _pdbx_refine_tls.S[2][1] -0.2291 _pdbx_refine_tls.S[2][2] 0.0286 _pdbx_refine_tls.S[2][3] 0.0697 _pdbx_refine_tls.S[3][1] 0.0297 _pdbx_refine_tls.S[3][2] 0.0069 _pdbx_refine_tls.S[3][3] 0.0047 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 14 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 A 15 A 16 ? . . . . ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 AutoSol phasing . ? 2 REFMAC refinement 5.7.0032 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 N _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 THR _pdbx_validate_close_contact.auth_seq_id_1 1 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 4BF _pdbx_validate_close_contact.auth_seq_id_2 16 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A HAO 13 ? ? C A HAO 13 ? ? N A LYS 14 ? ? 145.01 117.20 27.81 2.20 Y 2 1 CA A HAO 15 ? ? C A HAO 15 ? ? N A 4BF 16 ? ? 143.75 117.20 26.55 2.20 Y # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id HAO _pdbx_validate_main_chain_plane.auth_asym_id A _pdbx_validate_main_chain_plane.auth_seq_id 13 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle 13.50 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 4BF CD1 C Y N 1 4BF CE1 C Y N 2 4BF CZ C Y N 3 4BF BR BR N N 4 4BF CE2 C Y N 5 4BF CD2 C Y N 6 4BF CG C Y N 7 4BF CB C N N 8 4BF CA C N S 9 4BF N N N N 10 4BF C C N N 11 4BF OXT O N N 12 4BF O O N N 13 4BF HD1 H N N 14 4BF HE1 H N N 15 4BF HE2 H N N 16 4BF HD2 H N N 17 4BF HB3 H N N 18 4BF HB2 H N N 19 4BF HA H N N 20 4BF H H N N 21 4BF H2 H N N 22 4BF HXT H N N 23 ALA N N N N 24 ALA CA C N S 25 ALA C C N N 26 ALA O O N N 27 ALA CB C N N 28 ALA OXT O N N 29 ALA H H N N 30 ALA H2 H N N 31 ALA HA H N N 32 ALA HB1 H N N 33 ALA HB2 H N N 34 ALA HB3 H N N 35 ALA HXT H N N 36 ASP N N N N 37 ASP CA C N S 38 ASP C C N N 39 ASP O O N N 40 ASP CB C N N 41 ASP CG C N N 42 ASP OD1 O N N 43 ASP OD2 O N N 44 ASP OXT O N N 45 ASP H H N N 46 ASP H2 H N N 47 ASP HA H N N 48 ASP HB2 H N N 49 ASP HB3 H N N 50 ASP HD2 H N N 51 ASP HXT H N N 52 GLN N N N N 53 GLN CA C N S 54 GLN C C N N 55 GLN O O N N 56 GLN CB C N N 57 GLN CG C N N 58 GLN CD C N N 59 GLN OE1 O N N 60 GLN NE2 N N N 61 GLN OXT O N N 62 GLN H H N N 63 GLN H2 H N N 64 GLN HA H N N 65 GLN HB2 H N N 66 GLN HB3 H N N 67 GLN HG2 H N N 68 GLN HG3 H N N 69 GLN HE21 H N N 70 GLN HE22 H N N 71 GLN HXT H N N 72 GLU N N N N 73 GLU CA C N S 74 GLU C C N N 75 GLU O O N N 76 GLU CB C N N 77 GLU CG C N N 78 GLU CD C N N 79 GLU OE1 O N N 80 GLU OE2 O N N 81 GLU OXT O N N 82 GLU H H N N 83 GLU H2 H N N 84 GLU HA H N N 85 GLU HB2 H N N 86 GLU HB3 H N N 87 GLU HG2 H N N 88 GLU HG3 H N N 89 GLU HE2 H N N 90 GLU HXT H N N 91 HAO N N N N 92 HAO N9 N N N 93 HAO C10 C N N 94 HAO O11 O N N 95 HAO CA C Y N 96 HAO C13 C Y N 97 HAO C14 C Y N 98 HAO C15 C N N 99 HAO O15 O N N 100 HAO C17 C Y N 101 HAO C18 C Y N 102 HAO C19 C Y N 103 HAO N20 N N N 104 HAO C21 C N N 105 HAO O22 O N N 106 HAO C C N N 107 HAO O O N N 108 HAO H H N N 109 HAO H13 H N N 110 HAO H15 H N N 111 HAO H15A H N N 112 HAO H15B H N N 113 HAO H17 H N N 114 HAO H18 H N N 115 HAO HN20 H N N 116 HAO OXT O N N 117 HAO H2 H N N 118 HAO H10 H N N 119 HAO HXT H N N 120 HOH O O N N 121 HOH H1 H N N 122 HOH H2 H N N 123 LEU N N N N 124 LEU CA C N S 125 LEU C C N N 126 LEU O O N N 127 LEU CB C N N 128 LEU CG C N N 129 LEU CD1 C N N 130 LEU CD2 C N N 131 LEU OXT O N N 132 LEU H H N N 133 LEU H2 H N N 134 LEU HA H N N 135 LEU HB2 H N N 136 LEU HB3 H N N 137 LEU HG H N N 138 LEU HD11 H N N 139 LEU HD12 H N N 140 LEU HD13 H N N 141 LEU HD21 H N N 142 LEU HD22 H N N 143 LEU HD23 H N N 144 LEU HXT H N N 145 LYS N N N N 146 LYS CA C N S 147 LYS C C N N 148 LYS O O N N 149 LYS CB C N N 150 LYS CG C N N 151 LYS CD C N N 152 LYS CE C N N 153 LYS NZ N N N 154 LYS OXT O N N 155 LYS H H N N 156 LYS H2 H N N 157 LYS HA H N N 158 LYS HB2 H N N 159 LYS HB3 H N N 160 LYS HG2 H N N 161 LYS HG3 H N N 162 LYS HD2 H N N 163 LYS HD3 H N N 164 LYS HE2 H N N 165 LYS HE3 H N N 166 LYS HZ1 H N N 167 LYS HZ2 H N N 168 LYS HZ3 H N N 169 LYS HXT H N N 170 NA NA NA N N 171 ORN N N N N 172 ORN CA C N S 173 ORN CB C N N 174 ORN CG C N N 175 ORN CD C N N 176 ORN NE N N N 177 ORN C C N N 178 ORN O O N N 179 ORN OXT O N N 180 ORN H H N N 181 ORN H2 H N N 182 ORN HA H N N 183 ORN HB2 H N N 184 ORN HB3 H N N 185 ORN HG2 H N N 186 ORN HG3 H N N 187 ORN HD2 H N N 188 ORN HD3 H N N 189 ORN HE1 H N N 190 ORN HE2 H N N 191 ORN HXT H N N 192 PHE N N N N 193 PHE CA C N S 194 PHE C C N N 195 PHE O O N N 196 PHE CB C N N 197 PHE CG C Y N 198 PHE CD1 C Y N 199 PHE CD2 C Y N 200 PHE CE1 C Y N 201 PHE CE2 C Y N 202 PHE CZ C Y N 203 PHE OXT O N N 204 PHE H H N N 205 PHE H2 H N N 206 PHE HA H N N 207 PHE HB2 H N N 208 PHE HB3 H N N 209 PHE HD1 H N N 210 PHE HD2 H N N 211 PHE HE1 H N N 212 PHE HE2 H N N 213 PHE HZ H N N 214 PHE HXT H N N 215 TBU O O N N 216 TBU C C N N 217 TBU C1 C N N 218 TBU C2 C N N 219 TBU C3 C N N 220 TBU HO H N N 221 TBU H11 H N N 222 TBU H12 H N N 223 TBU H13 H N N 224 TBU H21 H N N 225 TBU H22 H N N 226 TBU H23 H N N 227 TBU H31 H N N 228 TBU H32 H N N 229 TBU H33 H N N 230 THR N N N N 231 THR CA C N S 232 THR C C N N 233 THR O O N N 234 THR CB C N R 235 THR OG1 O N N 236 THR CG2 C N N 237 THR OXT O N N 238 THR H H N N 239 THR H2 H N N 240 THR HA H N N 241 THR HB H N N 242 THR HG1 H N N 243 THR HG21 H N N 244 THR HG22 H N N 245 THR HG23 H N N 246 THR HXT H N N 247 VAL N N N N 248 VAL CA C N S 249 VAL C C N N 250 VAL O O N N 251 VAL CB C N N 252 VAL CG1 C N N 253 VAL CG2 C N N 254 VAL OXT O N N 255 VAL H H N N 256 VAL H2 H N N 257 VAL HA H N N 258 VAL HB H N N 259 VAL HG11 H N N 260 VAL HG12 H N N 261 VAL HG13 H N N 262 VAL HG21 H N N 263 VAL HG22 H N N 264 VAL HG23 H N N 265 VAL HXT H N N 266 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 4BF CD1 CE1 doub Y N 1 4BF CD1 CG sing Y N 2 4BF CD1 HD1 sing N N 3 4BF CE1 CZ sing Y N 4 4BF CE1 HE1 sing N N 5 4BF CZ BR sing N N 6 4BF CZ CE2 doub Y N 7 4BF CE2 CD2 sing Y N 8 4BF CE2 HE2 sing N N 9 4BF CD2 CG doub Y N 10 4BF CD2 HD2 sing N N 11 4BF CG CB sing N N 12 4BF CB CA sing N N 13 4BF CB HB3 sing N N 14 4BF CB HB2 sing N N 15 4BF CA N sing N N 16 4BF CA C sing N N 17 4BF CA HA sing N N 18 4BF N H sing N N 19 4BF N H2 sing N N 20 4BF C OXT sing N N 21 4BF C O doub N N 22 4BF OXT HXT sing N N 23 ALA N CA sing N N 24 ALA N H sing N N 25 ALA N H2 sing N N 26 ALA CA C sing N N 27 ALA CA CB sing N N 28 ALA CA HA sing N N 29 ALA C O doub N N 30 ALA C OXT sing N N 31 ALA CB HB1 sing N N 32 ALA CB HB2 sing N N 33 ALA CB HB3 sing N N 34 ALA OXT HXT sing N N 35 ASP N CA sing N N 36 ASP N H sing N N 37 ASP N H2 sing N N 38 ASP CA C sing N N 39 ASP CA CB sing N N 40 ASP CA HA sing N N 41 ASP C O doub N N 42 ASP C OXT sing N N 43 ASP CB CG sing N N 44 ASP CB HB2 sing N N 45 ASP CB HB3 sing N N 46 ASP CG OD1 doub N N 47 ASP CG OD2 sing N N 48 ASP OD2 HD2 sing N N 49 ASP OXT HXT sing N N 50 GLN N CA sing N N 51 GLN N H sing N N 52 GLN N H2 sing N N 53 GLN CA C sing N N 54 GLN CA CB sing N N 55 GLN CA HA sing N N 56 GLN C O doub N N 57 GLN C OXT sing N N 58 GLN CB CG sing N N 59 GLN CB HB2 sing N N 60 GLN CB HB3 sing N N 61 GLN CG CD sing N N 62 GLN CG HG2 sing N N 63 GLN CG HG3 sing N N 64 GLN CD OE1 doub N N 65 GLN CD NE2 sing N N 66 GLN NE2 HE21 sing N N 67 GLN NE2 HE22 sing N N 68 GLN OXT HXT sing N N 69 GLU N CA sing N N 70 GLU N H sing N N 71 GLU N H2 sing N N 72 GLU CA C sing N N 73 GLU CA CB sing N N 74 GLU CA HA sing N N 75 GLU C O doub N N 76 GLU C OXT sing N N 77 GLU CB CG sing N N 78 GLU CB HB2 sing N N 79 GLU CB HB3 sing N N 80 GLU CG CD sing N N 81 GLU CG HG2 sing N N 82 GLU CG HG3 sing N N 83 GLU CD OE1 doub N N 84 GLU CD OE2 sing N N 85 GLU OE2 HE2 sing N N 86 GLU OXT HXT sing N N 87 HAO N N9 sing N N 88 HAO N H sing N N 89 HAO C10 N9 sing N N 90 HAO C10 CA sing N N 91 HAO O11 C10 doub N N 92 HAO CA C14 sing Y N 93 HAO C13 CA doub Y N 94 HAO C13 C19 sing Y N 95 HAO C13 H13 sing N N 96 HAO C14 C17 doub Y N 97 HAO C14 O15 sing N N 98 HAO C15 H15 sing N N 99 HAO C15 H15A sing N N 100 HAO C15 H15B sing N N 101 HAO O15 C15 sing N N 102 HAO C17 H17 sing N N 103 HAO C18 C17 sing Y N 104 HAO C18 H18 sing N N 105 HAO C19 C18 doub Y N 106 HAO N20 C19 sing N N 107 HAO N20 HN20 sing N N 108 HAO C21 N20 sing N N 109 HAO C21 O22 doub N N 110 HAO C C21 sing N N 111 HAO C OXT sing N N 112 HAO O C doub N N 113 HAO N H2 sing N N 114 HAO N9 H10 sing N N 115 HAO OXT HXT sing N N 116 HOH O H1 sing N N 117 HOH O H2 sing N N 118 LEU N CA sing N N 119 LEU N H sing N N 120 LEU N H2 sing N N 121 LEU CA C sing N N 122 LEU CA CB sing N N 123 LEU CA HA sing N N 124 LEU C O doub N N 125 LEU C OXT sing N N 126 LEU CB CG sing N N 127 LEU CB HB2 sing N N 128 LEU CB HB3 sing N N 129 LEU CG CD1 sing N N 130 LEU CG CD2 sing N N 131 LEU CG HG sing N N 132 LEU CD1 HD11 sing N N 133 LEU CD1 HD12 sing N N 134 LEU CD1 HD13 sing N N 135 LEU CD2 HD21 sing N N 136 LEU CD2 HD22 sing N N 137 LEU CD2 HD23 sing N N 138 LEU OXT HXT sing N N 139 LYS N CA sing N N 140 LYS N H sing N N 141 LYS N H2 sing N N 142 LYS CA C sing N N 143 LYS CA CB sing N N 144 LYS CA HA sing N N 145 LYS C O doub N N 146 LYS C OXT sing N N 147 LYS CB CG sing N N 148 LYS CB HB2 sing N N 149 LYS CB HB3 sing N N 150 LYS CG CD sing N N 151 LYS CG HG2 sing N N 152 LYS CG HG3 sing N N 153 LYS CD CE sing N N 154 LYS CD HD2 sing N N 155 LYS CD HD3 sing N N 156 LYS CE NZ sing N N 157 LYS CE HE2 sing N N 158 LYS CE HE3 sing N N 159 LYS NZ HZ1 sing N N 160 LYS NZ HZ2 sing N N 161 LYS NZ HZ3 sing N N 162 LYS OXT HXT sing N N 163 ORN N CA sing N N 164 ORN N H sing N N 165 ORN N H2 sing N N 166 ORN CA CB sing N N 167 ORN CA C sing N N 168 ORN CA HA sing N N 169 ORN CB CG sing N N 170 ORN CB HB2 sing N N 171 ORN CB HB3 sing N N 172 ORN CG CD sing N N 173 ORN CG HG2 sing N N 174 ORN CG HG3 sing N N 175 ORN CD NE sing N N 176 ORN CD HD2 sing N N 177 ORN CD HD3 sing N N 178 ORN NE HE1 sing N N 179 ORN NE HE2 sing N N 180 ORN C O doub N N 181 ORN C OXT sing N N 182 ORN OXT HXT sing N N 183 PHE N CA sing N N 184 PHE N H sing N N 185 PHE N H2 sing N N 186 PHE CA C sing N N 187 PHE CA CB sing N N 188 PHE CA HA sing N N 189 PHE C O doub N N 190 PHE C OXT sing N N 191 PHE CB CG sing N N 192 PHE CB HB2 sing N N 193 PHE CB HB3 sing N N 194 PHE CG CD1 doub Y N 195 PHE CG CD2 sing Y N 196 PHE CD1 CE1 sing Y N 197 PHE CD1 HD1 sing N N 198 PHE CD2 CE2 doub Y N 199 PHE CD2 HD2 sing N N 200 PHE CE1 CZ doub Y N 201 PHE CE1 HE1 sing N N 202 PHE CE2 CZ sing Y N 203 PHE CE2 HE2 sing N N 204 PHE CZ HZ sing N N 205 PHE OXT HXT sing N N 206 TBU O C sing N N 207 TBU O HO sing N N 208 TBU C C1 sing N N 209 TBU C C2 sing N N 210 TBU C C3 sing N N 211 TBU C1 H11 sing N N 212 TBU C1 H12 sing N N 213 TBU C1 H13 sing N N 214 TBU C2 H21 sing N N 215 TBU C2 H22 sing N N 216 TBU C2 H23 sing N N 217 TBU C3 H31 sing N N 218 TBU C3 H32 sing N N 219 TBU C3 H33 sing N N 220 THR N CA sing N N 221 THR N H sing N N 222 THR N H2 sing N N 223 THR CA C sing N N 224 THR CA CB sing N N 225 THR CA HA sing N N 226 THR C O doub N N 227 THR C OXT sing N N 228 THR CB OG1 sing N N 229 THR CB CG2 sing N N 230 THR CB HB sing N N 231 THR OG1 HG1 sing N N 232 THR CG2 HG21 sing N N 233 THR CG2 HG22 sing N N 234 THR CG2 HG23 sing N N 235 THR OXT HXT sing N N 236 VAL N CA sing N N 237 VAL N H sing N N 238 VAL N H2 sing N N 239 VAL CA C sing N N 240 VAL CA CB sing N N 241 VAL CA HA sing N N 242 VAL C O doub N N 243 VAL C OXT sing N N 244 VAL CB CG1 sing N N 245 VAL CB CG2 sing N N 246 VAL CB HB sing N N 247 VAL CG1 HG11 sing N N 248 VAL CG1 HG12 sing N N 249 VAL CG1 HG13 sing N N 250 VAL CG2 HG21 sing N N 251 VAL CG2 HG22 sing N N 252 VAL CG2 HG23 sing N N 253 VAL OXT HXT sing N N 254 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'TERTIARY-BUTYL ALCOHOL' TBU 3 'SODIUM ION' NA 4 water HOH #