HEADER HYDROLASE 23-JAN-13 4IVK TITLE CRYSTAL STRUCTURE OF A FAMMILY VIII CARBOXYLESTERASE IN A COMPLEX WITH TITLE 2 CEPHALOTHIN. COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBOXYLESTERASES; COMPND 3 CHAIN: A; COMPND 4 EC: 3.1.1.1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNCULTURED BACTERIUM; SOURCE 3 ORGANISM_TAXID: 77133; SOURCE 4 OTHER_DETAILS: DEEP SEA SEDIMENT KEYWDS HELICAL DOMAIN AND A ALPHA/BETA DOMAIN, DEEP SEA SEDIMENT, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.J.AN,M.-K.KIM,C.-S.JEONG,S.-S.CHA REVDAT 3 20-SEP-23 4IVK 1 REMARK SEQADV LINK REVDAT 2 30-OCT-13 4IVK 1 JRNL REVDAT 1 19-JUN-13 4IVK 0 JRNL AUTH S.S.CHA,Y.J.AN,C.S.JEONG,M.K.KIM,J.H.JEON,C.M.LEE,H.S.LEE, JRNL AUTH 2 S.G.KANG,J.H.LEE JRNL TITL STRUCTURAL BASIS FOR THE BETA-LACTAMASE ACTIVITY OF ESTU1, A JRNL TITL 2 FAMILY VIII CARBOXYLESTERASE. JRNL REF PROTEINS V. 81 2045 2013 JRNL REFN ISSN 0887-3585 JRNL PMID 23737193 JRNL DOI 10.1002/PROT.24334 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.03 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 84680 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.182 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4471 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6197 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.39 REMARK 3 BIN R VALUE (WORKING SET) : 0.2130 REMARK 3 BIN FREE R VALUE SET COUNT : 327 REMARK 3 BIN FREE R VALUE : 0.2380 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3086 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 338 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.18000 REMARK 3 B22 (A**2) : -1.18000 REMARK 3 B33 (A**2) : 2.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.075 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.068 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.039 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.725 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.961 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3197 ; 0.005 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3037 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4329 ; 1.139 ; 1.986 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7009 ; 0.749 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 403 ; 5.566 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 126 ;29.294 ;23.651 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 529 ;12.004 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;13.039 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 472 ; 0.069 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3594 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 698 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 6234 ; 1.564 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 93 ;27.141 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 6410 ; 8.950 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4IVK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-FEB-13. REMARK 100 THE DEPOSITION ID IS D_1000077263. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NE3A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 89398 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 4IVI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 75.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.2 M AMMONIUM SULFATE AND 0.1 M TRIS REMARK 280 -HCL (PH 8.5), MICROBATCH, TEMPERATURE 295KK REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 74.55100 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 74.55100 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 86.28550 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 74.55100 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 74.55100 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 86.28550 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 74.55100 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 74.55100 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 86.28550 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 74.55100 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 74.55100 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 86.28550 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 74.55100 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 74.55100 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 86.28550 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 74.55100 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 74.55100 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 86.28550 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 74.55100 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 74.55100 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 86.28550 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 74.55100 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 74.55100 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 86.28550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 56900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 109670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -68.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 6 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 7 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 914 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 THR A 3 REMARK 465 SER A 4 REMARK 465 ALA A 5 REMARK 465 LYS A 6 REMARK 465 PHE A 7 REMARK 465 LEU A 8 REMARK 465 SER A 9 REMARK 465 PHE A 10 REMARK 465 ALA A 11 REMARK 465 VAL A 12 REMARK 465 SER A 13 REMARK 465 PHE A 14 REMARK 465 VAL A 15 REMARK 465 LEU A 16 REMARK 465 LEU A 17 REMARK 465 ILE A 18 REMARK 465 ILE A 19 REMARK 465 ALA A 20 REMARK 465 SER A 21 REMARK 465 THR A 22 REMARK 465 SER A 23 REMARK 465 PHE A 24 REMARK 465 HIS A 429 REMARK 465 HIS A 430 REMARK 465 HIS A 431 REMARK 465 HIS A 432 REMARK 465 HIS A 433 REMARK 465 HIS A 434 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 26 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 26 -56.58 161.41 REMARK 500 TYR A 99 -119.05 43.24 REMARK 500 LEU A 245 -59.37 -131.69 REMARK 500 ASP A 274 45.25 -141.80 REMARK 500 GLN A 296 -8.63 -154.79 REMARK 500 VAL A 369 -68.15 70.52 REMARK 500 PRO A 371 32.37 -83.07 REMARK 500 VAL A 406 -70.12 -127.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 CEP A 501 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CEP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 505 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IVI RELATED DB: PDB DBREF 4IVK A 1 426 UNP K4HQE7 K4HQE7_9BACT 1 426 SEQADV 4IVK LEU A 427 UNP K4HQE7 EXPRESSION TAG SEQADV 4IVK GLU A 428 UNP K4HQE7 EXPRESSION TAG SEQADV 4IVK HIS A 429 UNP K4HQE7 EXPRESSION TAG SEQADV 4IVK HIS A 430 UNP K4HQE7 EXPRESSION TAG SEQADV 4IVK HIS A 431 UNP K4HQE7 EXPRESSION TAG SEQADV 4IVK HIS A 432 UNP K4HQE7 EXPRESSION TAG SEQADV 4IVK HIS A 433 UNP K4HQE7 EXPRESSION TAG SEQADV 4IVK HIS A 434 UNP K4HQE7 EXPRESSION TAG SEQRES 1 A 434 MET LYS THR SER ALA LYS PHE LEU SER PHE ALA VAL SER SEQRES 2 A 434 PHE VAL LEU LEU ILE ILE ALA SER THR SER PHE ALA GLU SEQRES 3 A 434 GLY PRO VAL THR ALA THR LYS PRO LYS GLU ALA GLY PHE SEQRES 4 A 434 THR SER GLU GLY LEU ALA ARG ILE ASP ALA TYR LEU LYS SEQRES 5 A 434 ASN GLU ILE GLN ALA LYS THR MET PRO GLY ALA VAL MET SEQRES 6 A 434 MET ILE LYS ARG ASN GLY GLU THR ALA TYR PHE SER SER SEQRES 7 A 434 PHE GLY LEU ARG ASP PRO ASP THR LYS GLU PRO MET THR SEQRES 8 A 434 ALA GLU THR ILE PHE ARG ILE TYR SER MET SER LYS PRO SEQRES 9 A 434 ILE THR THR VAL ALA ALA MET MET LEU VAL GLU GLU GLY SEQRES 10 A 434 LYS LEU GLN LEU ASP GLU PRO VAL SER LYS TYR ILE PRO SEQRES 11 A 434 SER PHE ALA ASN VAL LYS VAL GLY VAL GLU THR LYS GLY SEQRES 12 A 434 GLU ASN GLY MET ALA LEU GLU THR GLY PRO VAL LYS ARG SEQRES 13 A 434 ALA ILE THR ILE GLN ASP LEU MET ARG HIS THR SER GLY SEQRES 14 A 434 ILE THR TYR GLY PHE VAL GLY ASP GLY LEU VAL LYS LYS SEQRES 15 A 434 ALA TYR ILE ALA SER ASN LEU PHE ASP GLY ASP PHE ASP SEQRES 16 A 434 ASN ALA GLU PHE ALA GLU ARG ILE ALA LYS LEU PRO LEU SEQRES 17 A 434 VAL TYR GLN PRO GLY THR THR TRP ASP TYR GLY HIS SER SEQRES 18 A 434 THR ASP ILE LEU GLY ARG VAL VAL GLU VAL VAL SER GLY SEQRES 19 A 434 LYS SER LEU TYR GLN PHE GLU LYS GLU ARG LEU LEU ASP SEQRES 20 A 434 PRO LEU GLY MET LYS ASP THR GLY PHE TYR VAL THR ASP SEQRES 21 A 434 PRO ALA LYS LYS SER LEU VAL ALA GLU ALA MET PRO ASN SEQRES 22 A 434 ASP ARG LYS ILE GLY GLY SER GLU MET PHE ASP PRO ARG SEQRES 23 A 434 VAL GLN LYS LYS TRP GLU PRO GLY GLY GLN GLY MET VAL SEQRES 24 A 434 SER THR ILE GLY ASP TYR ALA ARG PHE THR GLN MET VAL SEQRES 25 A 434 LEU ASN GLY GLY THR LEU ASP GLY LYS ARG TYR LEU SER SEQRES 26 A 434 PRO LYS THR ILE ALA TYR MET GLY SER ASN HIS ILE PRO SEQRES 27 A 434 GLN ALA SER GLY ILE VAL PRO GLY ALA TYR TYR LEU PRO SEQRES 28 A 434 GLY PRO GLY VAL GLY PHE GLY LEU GLY PHE ALA VAL ARG SEQRES 29 A 434 THR GLU ALA GLY VAL THR PRO VAL GLU GLY SER VAL GLY SEQRES 30 A 434 ASP LEU SER TRP GLY GLY ALA GLY GLY THR VAL PHE TRP SEQRES 31 A 434 ILE ASP PRO LYS GLU ASN LEU THR VAL VAL PHE MET ALA SEQRES 32 A 434 PRO MET VAL SER PRO ARG ALA ARG VAL TRP ARG THR LEU SEQRES 33 A 434 ARG ASN ILE VAL TYR GLY ALA PHE ASP ARG LEU GLU HIS SEQRES 34 A 434 HIS HIS HIS HIS HIS HET CEP A 501 22 HET SO4 A 502 5 HET SO4 A 503 5 HET SO4 A 504 5 HET SO4 A 505 5 HETNAM CEP CEPHALOTHIN GROUP HETNAM SO4 SULFATE ION FORMUL 2 CEP C16 H18 N2 O6 S2 FORMUL 3 SO4 4(O4 S 2-) FORMUL 7 HOH *338(H2 O) HELIX 1 1 THR A 40 ALA A 57 1 18 HELIX 2 2 MET A 101 GLU A 116 1 16 HELIX 3 3 PRO A 124 TYR A 128 5 5 HELIX 4 4 ILE A 129 ALA A 133 5 5 HELIX 5 5 THR A 159 HIS A 166 1 8 HELIX 6 6 GLY A 178 SER A 187 1 10 HELIX 7 7 ASP A 195 LYS A 205 1 11 HELIX 8 8 HIS A 220 GLY A 234 1 15 HELIX 9 9 SER A 236 LEU A 245 1 10 HELIX 10 10 LEU A 245 GLY A 250 1 6 HELIX 11 11 LYS A 263 VAL A 267 5 5 HELIX 12 12 MET A 271 ASP A 274 5 4 HELIX 13 13 THR A 301 ASN A 314 1 14 HELIX 14 14 SER A 325 GLY A 333 1 9 HELIX 15 15 PRO A 338 GLY A 342 5 5 HELIX 16 16 PRO A 408 ALA A 423 1 16 SHEET 1 A 8 GLU A 26 PRO A 28 0 SHEET 2 A 8 GLU A 72 GLY A 80 -1 O SER A 78 N GLY A 27 SHEET 3 A 8 GLY A 62 ARG A 69 -1 N ILE A 67 O TYR A 75 SHEET 4 A 8 LEU A 397 MET A 402 -1 O THR A 398 N LYS A 68 SHEET 5 A 8 VAL A 388 ASP A 392 -1 N ASP A 392 O LEU A 397 SHEET 6 A 8 LEU A 379 GLY A 382 -1 N LEU A 379 O ILE A 391 SHEET 7 A 8 ALA A 362 ARG A 364 -1 N ALA A 362 O SER A 380 SHEET 8 A 8 VAL A 355 PHE A 357 -1 N GLY A 356 O VAL A 363 SHEET 1 B 2 PHE A 96 ARG A 97 0 SHEET 2 B 2 VAL A 299 SER A 300 -1 O SER A 300 N PHE A 96 SHEET 1 C 2 LYS A 136 GLY A 143 0 SHEET 2 C 2 GLY A 146 PRO A 153 -1 O GLU A 150 N VAL A 139 SHEET 1 D 2 THR A 215 TRP A 216 0 SHEET 2 D 2 VAL A 344 PRO A 345 1 O VAL A 344 N TRP A 216 SHEET 1 E 2 LYS A 276 ILE A 277 0 SHEET 2 E 2 SER A 280 GLU A 281 -1 O SER A 280 N ILE A 277 SHEET 1 F 2 THR A 317 LEU A 318 0 SHEET 2 F 2 LYS A 321 ARG A 322 -1 O LYS A 321 N LEU A 318 LINK OG SER A 100 C8 CEP A 501 1555 1555 1.37 SITE 1 AC1 11 TYR A 99 SER A 100 PHE A 174 VAL A 175 SITE 2 AC1 11 TYR A 218 ILE A 277 GLN A 296 GLY A 383 SITE 3 AC1 11 ALA A 384 ARG A 409 HOH A 865 SITE 1 AC2 4 LYS A 33 PRO A 34 LYS A 35 GLU A 36 SITE 1 AC3 7 VAL A 29 SER A 78 THR A 91 ALA A 92 SITE 2 AC3 7 GLU A 93 HOH A 869 HOH A 880 SITE 1 AC4 7 GLY A 250 GLY A 303 ASP A 304 ARG A 307 SITE 2 AC4 7 HOH A 667 HOH A 732 HOH A 772 SITE 1 AC5 3 GLY A 279 SER A 280 GLU A 281 CRYST1 149.102 149.102 172.571 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006707 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006707 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005795 0.00000