HEADER LIPID BINDING PROTEIN 28-JAN-13 4IY9 TITLE BMLP3 - C2 CRYSTAL FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: 30K PROTEIN 1; COMPND 3 CHAIN: A, B SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOMBYX MORI; SOURCE 3 ORGANISM_COMMON: SILK MOTH,SILKWORM; SOURCE 4 ORGANISM_TAXID: 7091; SOURCE 5 OTHER_DETAILS: PROTEIN ISOLATED FROM HEMOLYMPH KEYWDS LIPOPROTEIN 11 FAMILY, HEMOLYMPH, LIPID BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.J.PIETRZYK,A.BUJACZ,J.MUELLER-DIECKMANN,M.JASKOLSKI,G.BUJACZ REVDAT 3 20-SEP-23 4IY9 1 REMARK REVDAT 2 08-MAY-13 4IY9 1 JRNL REVDAT 1 24-APR-13 4IY9 0 JRNL AUTH A.J.PIETRZYK,A.BUJACZ,J.MUELLER-DIECKMANN,M.LOCHYNSKA, JRNL AUTH 2 M.JASKOLSKI,G.BUJACZ JRNL TITL TWO CRYSTAL STRUCTURES OF BOMBYX MORI LIPOPROTEIN 3 - JRNL TITL 2 STRUCTURAL CHARACTERIZATION OF A NEW 30-KDA LIPOPROTEIN JRNL TITL 3 FAMILY MEMBER. JRNL REF PLOS ONE V. 8 61303 2013 JRNL REFN ESSN 1932-6203 JRNL PMID 23613829 JRNL DOI 10.1371/JOURNAL.PONE.0061303 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.10 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.1 REMARK 3 NUMBER OF REFLECTIONS : 26475 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.272 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1325 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.1701 - 4.3663 0.99 3158 167 0.1776 0.2227 REMARK 3 2 4.3663 - 3.4664 0.98 3050 160 0.1715 0.2038 REMARK 3 3 3.4664 - 3.0284 0.99 3040 160 0.2158 0.2708 REMARK 3 4 3.0284 - 2.7516 0.99 3021 159 0.2386 0.2881 REMARK 3 5 2.7516 - 2.5544 0.99 3025 159 0.2662 0.3637 REMARK 3 6 2.5544 - 2.4039 0.99 3017 159 0.2774 0.3749 REMARK 3 7 2.4039 - 2.2835 0.97 2892 153 0.2797 0.3934 REMARK 3 8 2.2835 - 2.1841 0.44 1330 69 0.4253 0.4663 REMARK 3 9 2.1841 - 2.1000 0.86 2617 139 0.3239 0.3961 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.019 3979 REMARK 3 ANGLE : 1.810 5402 REMARK 3 CHIRALITY : 0.105 563 REMARK 3 PLANARITY : 0.010 697 REMARK 3 DIHEDRAL : 16.449 1470 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 5:51 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.3772 9.0116 -22.3078 REMARK 3 T TENSOR REMARK 3 T11: 0.3852 T22: 0.9304 REMARK 3 T33: 0.3980 T12: 0.0097 REMARK 3 T13: -0.0221 T23: 0.0694 REMARK 3 L TENSOR REMARK 3 L11: 1.8776 L22: 1.6395 REMARK 3 L33: 2.0755 L12: -0.4866 REMARK 3 L13: 0.1693 L23: 0.1495 REMARK 3 S TENSOR REMARK 3 S11: 0.1374 S12: 1.4040 S13: 0.0856 REMARK 3 S21: -0.5452 S22: -0.0513 S23: 0.2885 REMARK 3 S31: 0.2008 S32: -0.8353 S33: -0.1399 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 52:124 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.3501 7.3382 2.1569 REMARK 3 T TENSOR REMARK 3 T11: 0.2462 T22: 0.5877 REMARK 3 T33: 0.3536 T12: -0.0011 REMARK 3 T13: -0.0341 T23: 0.1296 REMARK 3 L TENSOR REMARK 3 L11: 2.5366 L22: 2.3426 REMARK 3 L33: 3.0780 L12: -0.5574 REMARK 3 L13: 0.3950 L23: -1.8064 REMARK 3 S TENSOR REMARK 3 S11: -0.0693 S12: -0.3505 S13: -0.0644 REMARK 3 S21: -0.0325 S22: 0.5422 S23: 0.2965 REMARK 3 S31: 0.0880 S32: -1.2093 S33: -0.1941 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 125:175 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.2660 7.3324 7.8869 REMARK 3 T TENSOR REMARK 3 T11: 0.2315 T22: 0.1685 REMARK 3 T33: 0.2864 T12: 0.0630 REMARK 3 T13: 0.0172 T23: 0.0577 REMARK 3 L TENSOR REMARK 3 L11: 2.7026 L22: 0.7645 REMARK 3 L33: 3.3350 L12: -0.3769 REMARK 3 L13: 1.3436 L23: -0.3076 REMARK 3 S TENSOR REMARK 3 S11: -0.0149 S12: -0.6616 S13: 0.1447 REMARK 3 S21: 0.2015 S22: 0.1857 S23: -0.1405 REMARK 3 S31: -0.3025 S32: -0.4238 S33: -0.0655 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESID 176:239 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.3610 -2.8577 3.5612 REMARK 3 T TENSOR REMARK 3 T11: 0.2985 T22: 0.2712 REMARK 3 T33: 0.3872 T12: -0.0500 REMARK 3 T13: -0.0618 T23: 0.1662 REMARK 3 L TENSOR REMARK 3 L11: 2.0098 L22: 1.6018 REMARK 3 L33: 3.6266 L12: -0.0762 REMARK 3 L13: 0.4839 L23: -0.9925 REMARK 3 S TENSOR REMARK 3 S11: 0.2047 S12: -0.0985 S13: -0.4933 REMARK 3 S21: -0.1421 S22: 0.2524 S23: 0.2293 REMARK 3 S31: 0.7567 S32: -0.4360 S33: -0.1419 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN B AND (RESID 5:35 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.9955 0.3521 55.2712 REMARK 3 T TENSOR REMARK 3 T11: 0.6640 T22: 1.0865 REMARK 3 T33: 0.5421 T12: -0.0381 REMARK 3 T13: 0.0241 T23: -0.2799 REMARK 3 L TENSOR REMARK 3 L11: 3.0986 L22: 0.9694 REMARK 3 L33: 2.2069 L12: -0.5611 REMARK 3 L13: 0.6828 L23: -0.0923 REMARK 3 S TENSOR REMARK 3 S11: 0.0665 S12: -1.1859 S13: 0.0254 REMARK 3 S21: -0.1326 S22: -0.0676 S23: -0.3415 REMARK 3 S31: -0.0733 S32: 0.6970 S33: 0.0274 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN B AND (RESID 36:76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.2304 -4.1325 47.1216 REMARK 3 T TENSOR REMARK 3 T11: 0.3956 T22: 0.9779 REMARK 3 T33: 0.4302 T12: -0.0051 REMARK 3 T13: -0.0364 T23: -0.1671 REMARK 3 L TENSOR REMARK 3 L11: 2.0807 L22: 1.8654 REMARK 3 L33: 2.1882 L12: 0.5702 REMARK 3 L13: -0.0315 L23: 0.1401 REMARK 3 S TENSOR REMARK 3 S11: 0.2570 S12: -0.9499 S13: 0.0577 REMARK 3 S21: 0.0115 S22: -0.1782 S23: -0.2632 REMARK 3 S31: 0.1382 S32: -0.0978 S33: -0.0928 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN B AND (RESID 77:94 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.5929 -10.3953 34.0742 REMARK 3 T TENSOR REMARK 3 T11: 0.4874 T22: 0.7222 REMARK 3 T33: 0.3677 T12: -0.0159 REMARK 3 T13: -0.0599 T23: -0.0074 REMARK 3 L TENSOR REMARK 3 L11: 1.7200 L22: 0.3014 REMARK 3 L33: 1.1080 L12: 0.0003 REMARK 3 L13: 0.1414 L23: 0.0147 REMARK 3 S TENSOR REMARK 3 S11: 0.3444 S12: -0.4409 S13: -0.2697 REMARK 3 S21: 1.0428 S22: 0.1447 S23: -0.1205 REMARK 3 S31: 0.2602 S32: 1.0442 S33: -0.2087 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN B AND (RESID 95:114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.4102 -10.7979 17.3816 REMARK 3 T TENSOR REMARK 3 T11: 0.2603 T22: 0.0978 REMARK 3 T33: 0.3597 T12: 0.1058 REMARK 3 T13: -0.0188 T23: 0.1242 REMARK 3 L TENSOR REMARK 3 L11: 1.8274 L22: 1.2756 REMARK 3 L33: 1.0578 L12: -0.1732 REMARK 3 L13: 0.2291 L23: 1.1767 REMARK 3 S TENSOR REMARK 3 S11: -0.0631 S12: 0.7598 S13: -0.6160 REMARK 3 S21: -0.3281 S22: 0.1253 S23: -0.1785 REMARK 3 S31: -0.2360 S32: 0.0059 S33: -0.0789 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN B AND (RESID 115:155 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.0007 -5.4452 24.9293 REMARK 3 T TENSOR REMARK 3 T11: 0.2379 T22: 0.1540 REMARK 3 T33: 0.3028 T12: -0.0178 REMARK 3 T13: 0.0639 T23: -0.0289 REMARK 3 L TENSOR REMARK 3 L11: 3.3011 L22: 0.5830 REMARK 3 L33: 3.3837 L12: -0.7436 REMARK 3 L13: 0.4385 L23: -0.8124 REMARK 3 S TENSOR REMARK 3 S11: 0.0735 S12: -0.2072 S13: 0.2946 REMARK 3 S21: 0.1987 S22: 0.2078 S23: -0.1992 REMARK 3 S31: -0.0516 S32: 0.3966 S33: -0.1833 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN B AND (RESID 156:179 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.0498 0.3571 21.8012 REMARK 3 T TENSOR REMARK 3 T11: 0.3457 T22: 0.3712 REMARK 3 T33: 0.3023 T12: 0.0446 REMARK 3 T13: 0.0481 T23: 0.0656 REMARK 3 L TENSOR REMARK 3 L11: 0.7325 L22: 1.6273 REMARK 3 L33: 2.6903 L12: -1.0295 REMARK 3 L13: -0.2721 L23: 0.7876 REMARK 3 S TENSOR REMARK 3 S11: 0.1651 S12: -0.2743 S13: 0.3825 REMARK 3 S21: -0.1616 S22: 0.1867 S23: -0.0544 REMARK 3 S31: -0.5042 S32: -0.4033 S33: -0.3174 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN B AND (RESID 180:239 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.0144 -10.1987 31.9557 REMARK 3 T TENSOR REMARK 3 T11: 0.2680 T22: 0.2807 REMARK 3 T33: 0.2315 T12: -0.0072 REMARK 3 T13: 0.0015 T23: 0.0680 REMARK 3 L TENSOR REMARK 3 L11: 3.6191 L22: 2.9372 REMARK 3 L33: 2.9131 L12: 0.0139 REMARK 3 L13: 0.1958 L23: -0.4231 REMARK 3 S TENSOR REMARK 3 S11: 0.1991 S12: -0.4990 S13: -0.0319 REMARK 3 S21: 0.3716 S22: -0.0162 S23: 0.0052 REMARK 3 S31: 0.1717 S32: -0.2759 S33: -0.1233 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4IY9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-FEB-13. REMARK 100 THE DEPOSITION ID IS D_1000077360. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAY-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918 REMARK 200 MONOCHROMATOR : KMC-1 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26553 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 38.164 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.3 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.49600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.580 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 4EFP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 M (NH4)2SO4, 0.1 M NH4I, PH 5.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 77.07500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 17.28000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 77.07500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 17.28000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 ASP A 2 REMARK 465 SER A 3 REMARK 465 ASP A 4 REMARK 465 ALA B 1 REMARK 465 ASP B 2 REMARK 465 SER B 3 REMARK 465 ASP B 4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 38 72.65 -113.76 REMARK 500 ASP A 111 -78.57 -87.63 REMARK 500 ASN A 160 -169.06 -77.48 REMARK 500 ASP A 188 -126.76 51.47 REMARK 500 LYS B 38 69.94 -115.77 REMARK 500 ASN B 56 -16.23 -147.28 REMARK 500 ASN B 160 173.86 -52.69 REMARK 500 ASP B 188 -128.68 49.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IY8 RELATED DB: PDB REMARK 900 RELATED ID: 3PUB RELATED DB: PDB REMARK 900 PROTEIN BELONGING TO THE SAME FAMILY, LIPOPROTEIN_11 FAMILY REMARK 900 RELATED ID: 4EFP RELATED DB: PDB REMARK 900 PROTEIN BELONGING TO THE SAME FAMILY, LIPOPROTEIN_11 FAMILY REMARK 900 RELATED ID: 4EFQ RELATED DB: PDB REMARK 900 PROTEIN BELONGING TO THE SAME FAMILY, LIPOPROTEIN_11 FAMILY REMARK 900 RELATED ID: 4EFR RELATED DB: PDB REMARK 900 PROTEIN BELONGING TO THE SAME FAMILY, LIPOPROTEIN_11 FAMILY DBREF 4IY9 A 1 239 UNP H9J4F6 H9J4F6_BOMMO 18 256 DBREF 4IY9 B 1 239 UNP H9J4F6 H9J4F6_BOMMO 18 256 SEQRES 1 A 239 ALA ASP SER ASP VAL PRO ASN ASP ILE LEU GLU GLU GLN SEQRES 2 A 239 LEU TYR ASN SER VAL VAL VAL ALA ASP TYR ASP SER ALA SEQRES 3 A 239 VAL GLU LYS SER LYS HIS LEU TYR GLU GLU LYS LYS SER SEQRES 4 A 239 GLU VAL ILE THR ASN VAL VAL ASN LYS LEU ILE ARG ASN SEQRES 5 A 239 ASN LYS MET ASN CYS MET GLU TYR ALA TYR GLN LEU TRP SEQRES 6 A 239 LEU GLN GLY SER LYS ASP ILE VAL ARG ASP CYS PHE PRO SEQRES 7 A 239 VAL GLU PHE ARG LEU ILE PHE ALA GLU ASN ALA ILE LYS SEQRES 8 A 239 LEU MET TYR LYS ARG ASP GLY LEU ALA LEU THR LEU SER SEQRES 9 A 239 ASN ASP VAL GLN GLY ASP ASP GLY ARG PRO ALA TYR GLY SEQRES 10 A 239 ASP GLY LYS ASP LYS THR SER PRO ARG VAL SER TRP LYS SEQRES 11 A 239 LEU ILE ALA LEU TRP GLU ASN ASN LYS VAL TYR PHE LYS SEQRES 12 A 239 ILE LEU ASN THR GLU ARG ASN GLN TYR LEU VAL LEU GLY SEQRES 13 A 239 VAL GLY THR ASN TRP ASN GLY ASP HIS MET ALA PHE GLY SEQRES 14 A 239 VAL ASN SER VAL ASP SER PHE ARG ALA GLN TRP TYR LEU SEQRES 15 A 239 GLN PRO ALA LYS TYR ASP ASN ASP VAL LEU PHE TYR ILE SEQRES 16 A 239 TYR ASN ARG GLU TYR SER LYS ALA LEU THR LEU SER ARG SEQRES 17 A 239 THR VAL GLU PRO SER GLY HIS ARG MET ALA TRP GLY TYR SEQRES 18 A 239 ASN GLY ARG VAL ILE GLY SER PRO GLU HIS TYR ALA TRP SEQRES 19 A 239 GLY ILE LYS ALA PHE SEQRES 1 B 239 ALA ASP SER ASP VAL PRO ASN ASP ILE LEU GLU GLU GLN SEQRES 2 B 239 LEU TYR ASN SER VAL VAL VAL ALA ASP TYR ASP SER ALA SEQRES 3 B 239 VAL GLU LYS SER LYS HIS LEU TYR GLU GLU LYS LYS SER SEQRES 4 B 239 GLU VAL ILE THR ASN VAL VAL ASN LYS LEU ILE ARG ASN SEQRES 5 B 239 ASN LYS MET ASN CYS MET GLU TYR ALA TYR GLN LEU TRP SEQRES 6 B 239 LEU GLN GLY SER LYS ASP ILE VAL ARG ASP CYS PHE PRO SEQRES 7 B 239 VAL GLU PHE ARG LEU ILE PHE ALA GLU ASN ALA ILE LYS SEQRES 8 B 239 LEU MET TYR LYS ARG ASP GLY LEU ALA LEU THR LEU SER SEQRES 9 B 239 ASN ASP VAL GLN GLY ASP ASP GLY ARG PRO ALA TYR GLY SEQRES 10 B 239 ASP GLY LYS ASP LYS THR SER PRO ARG VAL SER TRP LYS SEQRES 11 B 239 LEU ILE ALA LEU TRP GLU ASN ASN LYS VAL TYR PHE LYS SEQRES 12 B 239 ILE LEU ASN THR GLU ARG ASN GLN TYR LEU VAL LEU GLY SEQRES 13 B 239 VAL GLY THR ASN TRP ASN GLY ASP HIS MET ALA PHE GLY SEQRES 14 B 239 VAL ASN SER VAL ASP SER PHE ARG ALA GLN TRP TYR LEU SEQRES 15 B 239 GLN PRO ALA LYS TYR ASP ASN ASP VAL LEU PHE TYR ILE SEQRES 16 B 239 TYR ASN ARG GLU TYR SER LYS ALA LEU THR LEU SER ARG SEQRES 17 B 239 THR VAL GLU PRO SER GLY HIS ARG MET ALA TRP GLY TYR SEQRES 18 B 239 ASN GLY ARG VAL ILE GLY SER PRO GLU HIS TYR ALA TRP SEQRES 19 B 239 GLY ILE LYS ALA PHE HET IOD A 301 1 HETNAM IOD IODIDE ION FORMUL 3 IOD I 1- FORMUL 4 HOH *124(H2 O) HELIX 1 1 PRO A 6 VAL A 20 1 15 HELIX 2 2 ASP A 22 GLU A 36 1 15 HELIX 3 3 LYS A 38 ASN A 52 1 15 HELIX 4 4 MET A 55 GLN A 67 1 13 HELIX 5 5 SER A 69 PHE A 77 1 9 HELIX 6 6 PRO A 78 ALA A 86 1 9 HELIX 7 7 SER A 124 VAL A 127 5 4 HELIX 8 8 SER A 175 ALA A 178 5 4 HELIX 9 9 SER A 228 ALA A 233 1 6 HELIX 10 10 PRO B 6 VAL B 20 1 15 HELIX 11 11 ASP B 22 GLU B 36 1 15 HELIX 12 12 LYS B 38 ASN B 53 1 16 HELIX 13 13 ASN B 56 GLN B 67 1 12 HELIX 14 14 SER B 69 PHE B 77 1 9 HELIX 15 15 PRO B 78 ALA B 86 1 9 HELIX 16 16 SER B 124 VAL B 127 5 4 HELIX 17 17 SER B 175 ALA B 178 5 4 HELIX 18 18 SER B 228 ALA B 233 1 6 SITE 1 AC1 1 GLY B 158 CRYST1 154.150 34.560 93.140 90.00 97.99 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006487 0.000000 0.000910 0.00000 SCALE2 0.000000 0.028935 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010842 0.00000