HEADER TOXIN 01-FEB-13 4J1L TITLE MUTANT ENDOTOXIN TENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: TETANUS TOXIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 2-427; COMPND 5 SYNONYM: TENTOXYLYSIN, TETANUS TOXIN LIGHT CHAIN, TETANUS TOXIN CHAIN COMPND 6 L, TETANUS TOXIN HEAVY CHAIN, TETANUS TOXIN CHAIN H; COMPND 7 EC: 3.4.24.68; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM TETANI; SOURCE 3 ORGANISM_TAXID: 212717; SOURCE 4 STRAIN: E88; SOURCE 5 GENE: TETX; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ENDOTOXIN, TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR J.GUO,X.PAN,Y.ZHAO,S.CHEN REVDAT 3 20-MAR-24 4J1L 1 REMARK SEQADV LINK REVDAT 2 29-JUL-15 4J1L 1 SEQADV REVDAT 1 05-FEB-14 4J1L 0 JRNL AUTH J.GUO,X.PAN,Y.ZHAO,S.CHEN JRNL TITL ENGINEERING CLOSTRIDIA NEUROTOXINS WITH ELEVATED CATALYTIC JRNL TITL 2 ACTIVITY JRNL REF TOXICON V. 74 158 2013 JRNL REFN ISSN 0041-0101 JRNL PMID 23994593 JRNL DOI 10.1016/J.TOXICON.2013.08.055 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.12 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 16457 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.239 REMARK 3 R VALUE (WORKING SET) : 0.238 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 821 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1047 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.73 REMARK 3 BIN R VALUE (WORKING SET) : 0.3210 REMARK 3 BIN FREE R VALUE SET COUNT : 49 REMARK 3 BIN FREE R VALUE : 0.3120 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3178 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 138 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.09000 REMARK 3 B22 (A**2) : -0.38000 REMARK 3 B33 (A**2) : 0.29000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.751 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.328 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.196 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.818 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.856 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.860 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3249 ; 0.015 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4396 ; 1.838 ; 1.958 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 387 ; 7.229 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 171 ;42.848 ;25.439 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 563 ;20.530 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;26.094 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 472 ; 0.121 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2505 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES: REFINED INDIVIDUALLY REMARK 4 REMARK 4 4J1L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-FEB-13. REMARK 100 THE DEPOSITION ID IS D_1000077480. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 150 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16457 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y+1/2,-Z REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 52.69000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 88.41500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 52.69000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 88.41500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 52.69000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 88.41500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 52.69000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 88.41500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 64 REMARK 465 LEU A 65 REMARK 465 ILE A 66 REMARK 465 GLU A 67 REMARK 465 GLY A 68 REMARK 465 ALA A 69 REMARK 465 VAL A 209 REMARK 465 ILE A 210 REMARK 465 GLU A 211 REMARK 465 ASN A 212 REMARK 465 ILE A 213 REMARK 465 THR A 214 REMARK 465 SER A 215 REMARK 465 LEU A 216 REMARK 465 THR A 217 REMARK 465 ILE A 218 REMARK 465 GLY A 219 REMARK 465 LYS A 220 REMARK 465 GLU A 251 REMARK 465 ILE A 252 REMARK 465 ILE A 253 REMARK 465 PRO A 254 REMARK 465 SER A 255 REMARK 465 LYS A 256 REMARK 465 GLN A 257 REMARK 465 GLU A 258 REMARK 465 ILE A 259 REMARK 465 TYR A 260 REMARK 465 MET A 261 REMARK 465 GLN A 262 REMARK 465 HIS A 263 REMARK 465 THR A 264 REMARK 465 TYR A 265 REMARK 465 PRO A 266 REMARK 465 ILE A 267 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 271 ZN ZN A 501 1.50 REMARK 500 NH2 ARG A 9 OD2 ASP A 85 1.57 REMARK 500 NH2 ARG A 86 OE2 GLU A 201 2.00 REMARK 500 O ASP A 406 NZ LYS A 412 2.13 REMARK 500 O HOH A 652 O HOH A 703 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 9 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ASP A 345 CB - CG - OD1 ANGL. DEV. = 6.8 DEGREES REMARK 500 ASP A 345 CB - CG - OD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 15 15.81 -141.75 REMARK 500 ASP A 17 -68.59 -140.65 REMARK 500 ASP A 74 107.11 -171.65 REMARK 500 LEU A 118 46.97 -72.63 REMARK 500 ASN A 167 42.99 -98.31 REMARK 500 GLU A 168 88.62 -151.65 REMARK 500 ASP A 188 11.11 -147.17 REMARK 500 SER A 248 -79.46 -71.92 REMARK 500 ARG A 372 170.22 -53.02 REMARK 500 ASP A 381 129.38 -37.18 REMARK 500 PRO A 382 -172.66 -63.15 REMARK 500 ASP A 391 0.39 -53.12 REMARK 500 GLU A 410 25.59 45.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 VAL A 247 SER A 248 -149.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 233 NE2 REMARK 620 2 HIS A 237 NE2 104.7 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 501 DBREF 4J1L A 2 427 UNP P04958 TETX_CLOTE 2 427 SEQADV 4J1L GLU A 168 UNP P04958 LYS 168 ENGINEERED MUTATION SEQADV 4J1L ILE A 230 UNP P04958 LEU 230 ENGINEERED MUTATION SEQADV 4J1L VAL A 361 UNP P04958 ILE 361 CONFLICT SEQRES 1 A 426 PRO ILE THR ILE ASN ASN PHE ARG TYR SER ASP PRO VAL SEQRES 2 A 426 ASN ASN ASP THR ILE ILE MET MET GLU PRO PRO TYR CYS SEQRES 3 A 426 LYS GLY LEU ASP ILE TYR TYR LYS ALA PHE LYS ILE THR SEQRES 4 A 426 ASP ARG ILE TRP ILE VAL PRO GLU ARG TYR GLU PHE GLY SEQRES 5 A 426 THR LYS PRO GLU ASP PHE ASN PRO PRO SER SER LEU ILE SEQRES 6 A 426 GLU GLY ALA SER GLU TYR TYR ASP PRO ASN TYR LEU ARG SEQRES 7 A 426 THR ASP SER ASP LYS ASP ARG PHE LEU GLN THR MET VAL SEQRES 8 A 426 LYS LEU PHE ASN ARG ILE LYS ASN ASN VAL ALA GLY GLU SEQRES 9 A 426 ALA LEU LEU ASP LYS ILE ILE ASN ALA ILE PRO TYR LEU SEQRES 10 A 426 GLY ASN SER TYR SER LEU LEU ASP LYS PHE ASP THR ASN SEQRES 11 A 426 SER ASN SER VAL SER PHE ASN LEU LEU GLU GLN ASP PRO SEQRES 12 A 426 SER GLY ALA THR THR LYS SER ALA MET LEU THR ASN LEU SEQRES 13 A 426 ILE ILE PHE GLY PRO GLY PRO VAL LEU ASN GLU ASN GLU SEQRES 14 A 426 VAL ARG GLY ILE VAL LEU ARG VAL ASP ASN LYS ASN TYR SEQRES 15 A 426 PHE PRO CYS ARG ASP GLY PHE GLY SER ILE MET GLN MET SEQRES 16 A 426 ALA PHE CYS PRO GLU TYR VAL PRO THR PHE ASP ASN VAL SEQRES 17 A 426 ILE GLU ASN ILE THR SER LEU THR ILE GLY LYS SER LYS SEQRES 18 A 426 TYR PHE GLN ASP PRO ALA LEU ILE LEU MET HIS GLU LEU SEQRES 19 A 426 ILE HIS VAL LEU HIS GLY LEU TYR GLY MET GLN VAL SER SEQRES 20 A 426 SER HIS GLU ILE ILE PRO SER LYS GLN GLU ILE TYR MET SEQRES 21 A 426 GLN HIS THR TYR PRO ILE SER ALA GLU GLU LEU PHE THR SEQRES 22 A 426 PHE GLY GLY GLN ASP ALA ASN LEU ILE SER ILE ASP ILE SEQRES 23 A 426 LYS ASN ASP LEU TYR GLU LYS THR LEU ASN ASP TYR LYS SEQRES 24 A 426 ALA ILE ALA ASN LYS LEU SER GLN VAL THR SER CYS ASN SEQRES 25 A 426 ASP PRO ASN ILE ASP ILE ASP SER TYR LYS GLN ILE TYR SEQRES 26 A 426 GLN GLN LYS TYR GLN PHE ASP LYS ASP SER ASN GLY GLN SEQRES 27 A 426 TYR ILE VAL ASN GLU ASP LYS PHE GLN ILE LEU TYR ASN SEQRES 28 A 426 SER ILE MET TYR GLY PHE THR GLU VAL GLU LEU GLY LYS SEQRES 29 A 426 LYS PHE ASN ILE LYS THR ARG LEU SER TYR PHE SER MET SEQRES 30 A 426 ASN HIS ASP PRO VAL LYS ILE PRO ASN LEU LEU ASP ASP SEQRES 31 A 426 THR ILE TYR ASN ASP THR GLU GLY PHE ASN ILE GLU SER SEQRES 32 A 426 LYS ASP LEU LYS SER GLU TYR LYS GLY GLN ASN MET ARG SEQRES 33 A 426 VAL ASN THR ASN ALA PHE ARG ASN VAL ASP HET ZN A 501 1 HETNAM ZN ZINC ION FORMUL 2 ZN ZN 2+ FORMUL 3 HOH *138(H2 O) HELIX 1 1 PRO A 24 LYS A 28 5 5 HELIX 2 2 LYS A 55 ASN A 60 5 6 HELIX 3 3 THR A 80 ASN A 101 1 22 HELIX 4 4 ASN A 101 ALA A 114 1 14 HELIX 5 5 ASP A 226 TYR A 243 1 18 HELIX 6 6 ALA A 269 GLY A 276 1 8 HELIX 7 7 GLN A 278 ILE A 283 5 6 HELIX 8 8 SER A 284 VAL A 309 1 26 HELIX 9 9 ASP A 318 GLN A 331 1 14 HELIX 10 10 ASN A 343 TYR A 356 1 14 HELIX 11 11 THR A 359 ASN A 368 1 10 HELIX 12 12 ILE A 402 ASP A 406 5 5 HELIX 13 13 LYS A 408 ASN A 415 5 8 SHEET 1 A 8 THR A 148 LEU A 154 0 SHEET 2 A 8 SER A 136 GLN A 142 -1 N GLU A 141 O THR A 149 SHEET 3 A 8 ILE A 19 GLU A 23 -1 N GLU A 23 O ASN A 138 SHEET 4 A 8 TYR A 34 THR A 40 -1 O TYR A 34 N MET A 22 SHEET 5 A 8 ILE A 43 VAL A 46 -1 O ILE A 45 N PHE A 37 SHEET 6 A 8 LEU A 157 PHE A 160 1 O ILE A 159 N TRP A 44 SHEET 7 A 8 MET A 194 ALA A 197 1 O MET A 196 N PHE A 160 SHEET 8 A 8 GLU A 170 GLY A 173 -1 N ARG A 172 O GLN A 195 SHEET 1 B 2 LYS A 127 PHE A 128 0 SHEET 2 B 2 SER A 311 CYS A 312 1 O SER A 311 N PHE A 128 SHEET 1 C 2 LEU A 176 ARG A 177 0 SHEET 2 C 2 ASN A 182 TYR A 183 -1 O TYR A 183 N LEU A 176 SHEET 1 D 3 TYR A 223 PHE A 224 0 SHEET 2 D 3 TYR A 202 PHE A 206 -1 N PHE A 206 O TYR A 223 SHEET 3 D 3 HIS A 380 LYS A 384 -1 O VAL A 383 N VAL A 203 SHEET 1 E 2 PHE A 332 LYS A 334 0 SHEET 2 E 2 TYR A 340 VAL A 342 -1 O ILE A 341 N ASP A 333 LINK NE2 HIS A 233 ZN ZN A 501 1555 1555 2.32 LINK NE2 HIS A 237 ZN ZN A 501 1555 1555 2.16 SITE 1 AC1 3 HIS A 233 HIS A 237 GLU A 271 CRYST1 105.380 176.830 57.360 90.00 90.00 90.00 C 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009489 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005655 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017434 0.00000