HEADER HYDROLASE 05-FEB-13 4J35 TITLE MOLECULAR ENGINEERING OF ORGANOPHOSPHATE HYDROLYSIS ACTIVITY FROM A TITLE 2 WEAK PROMISCUOUS LACTONASE TEMPLATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOTRIESTERASE, PUTATIVE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS; SOURCE 3 ORGANISM_TAXID: 1299; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ORGANOPHOSPHATE HYDROLYSIS ACTIVITY, MOLECULAR ENGINEERING, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR R.STERNER,F.RAUSHEL,M.MEIER,C.RAJENDRAN,C.MALISI,N.FOX,S.SCHLEE, AUTHOR 2 D.BARONDEAU,B.H.CKER REVDAT 2 04-SEP-13 4J35 1 JRNL REVDAT 1 24-JUL-13 4J35 0 JRNL AUTH M.M.MEIER,C.RAJENDRAN,C.MALISI,N.G.FOX,C.XU,S.SCHLEE, JRNL AUTH 2 D.P.BARONDEAU,B.HOCKER,R.STERNER,F.M.RAUSHEL JRNL TITL MOLECULAR ENGINEERING OF ORGANOPHOSPHATE HYDROLYSIS ACTIVITY JRNL TITL 2 FROM A WEAK PROMISCUOUS LACTONASE TEMPLATE. JRNL REF J.AM.CHEM.SOC. V. 135 11670 2013 JRNL REFN ISSN 0002-7863 JRNL PMID 23837603 JRNL DOI 10.1021/JA405911H REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.090 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 44253 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2212 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.4805 - 4.4912 1.00 2869 153 0.1767 0.1838 REMARK 3 2 4.4912 - 3.5652 1.00 2713 142 0.1747 0.1868 REMARK 3 3 3.5652 - 3.1146 1.00 2695 142 0.2160 0.2707 REMARK 3 4 3.1146 - 2.8299 1.00 2643 138 0.2236 0.2434 REMARK 3 5 2.8299 - 2.6270 1.00 2657 140 0.2105 0.2827 REMARK 3 6 2.6270 - 2.4722 1.00 2610 138 0.1864 0.1803 REMARK 3 7 2.4722 - 2.3484 1.00 2642 139 0.2005 0.2103 REMARK 3 8 2.3484 - 2.2461 1.00 2628 138 0.2015 0.2486 REMARK 3 9 2.2461 - 2.1597 1.00 2601 137 0.2073 0.2422 REMARK 3 10 2.1597 - 2.0851 1.00 2616 137 0.2239 0.2530 REMARK 3 11 2.0851 - 2.0200 1.00 2594 137 0.2202 0.2378 REMARK 3 12 2.0200 - 1.9622 1.00 2614 136 0.2286 0.2884 REMARK 3 13 1.9622 - 1.9106 1.00 2585 136 0.2587 0.2863 REMARK 3 14 1.9106 - 1.8639 1.00 2590 137 0.2569 0.3017 REMARK 3 15 1.8639 - 1.8216 1.00 2559 134 0.2910 0.3209 REMARK 3 16 1.8216 - 1.7828 0.93 2425 128 0.3371 0.4038 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.30 REMARK 3 SHRINKAGE RADIUS : 1.11 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 53.49 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.540 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.26050 REMARK 3 B22 (A**2) : 0.26050 REMARK 3 B33 (A**2) : -0.52100 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 2475 REMARK 3 ANGLE : 1.477 3372 REMARK 3 CHIRALITY : 0.078 384 REMARK 3 PLANARITY : 0.007 447 REMARK 3 DIHEDRAL : 13.509 880 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: chain 'A' and (resseq 2:91) REMARK 3 ORIGIN FOR THE GROUP (A): -9.7170 13.7192 16.5841 REMARK 3 T TENSOR REMARK 3 T11: 0.3934 T22: 0.2835 REMARK 3 T33: 0.2668 T12: -0.1928 REMARK 3 T13: 0.0526 T23: -0.0591 REMARK 3 L TENSOR REMARK 3 L11: 0.2371 L22: 0.2927 REMARK 3 L33: 0.8633 L12: -0.0372 REMARK 3 L13: -0.0317 L23: 0.0620 REMARK 3 S TENSOR REMARK 3 S11: 0.0246 S12: 0.0030 S13: -0.1557 REMARK 3 S21: -0.1354 S22: 0.1028 S23: -0.0913 REMARK 3 S31: 0.1448 S32: 0.0467 S33: -0.0234 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: chain 'A' and (resseq 92:169) REMARK 3 ORIGIN FOR THE GROUP (A): -3.3832 31.1123 25.7441 REMARK 3 T TENSOR REMARK 3 T11: 0.3962 T22: 0.4020 REMARK 3 T33: 0.2585 T12: -0.2370 REMARK 3 T13: 0.0501 T23: -0.0617 REMARK 3 L TENSOR REMARK 3 L11: 0.2281 L22: 0.6419 REMARK 3 L33: 1.4458 L12: -0.1738 REMARK 3 L13: 0.3532 L23: 0.2841 REMARK 3 S TENSOR REMARK 3 S11: -0.0504 S12: -0.0736 S13: 0.0700 REMARK 3 S21: -0.0886 S22: 0.0518 S23: -0.0277 REMARK 3 S31: -0.2149 S32: 0.0967 S33: -0.0224 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: chain 'A' and (resseq 170:226) REMARK 3 ORIGIN FOR THE GROUP (A): -12.4037 37.2013 11.4900 REMARK 3 T TENSOR REMARK 3 T11: 0.5412 T22: 0.3041 REMARK 3 T33: 0.2618 T12: -0.2346 REMARK 3 T13: 0.0035 T23: 0.0266 REMARK 3 L TENSOR REMARK 3 L11: 1.0248 L22: 0.7595 REMARK 3 L33: 0.2784 L12: 0.1798 REMARK 3 L13: 0.1064 L23: -0.0685 REMARK 3 S TENSOR REMARK 3 S11: 0.0036 S12: 0.0403 S13: 0.1924 REMARK 3 S21: -0.0634 S22: 0.0497 S23: 0.0903 REMARK 3 S31: -0.1236 S32: 0.0413 S33: -0.0244 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: chain 'A' and (resseq 227:323) REMARK 3 ORIGIN FOR THE GROUP (A): -20.5939 23.9652 6.6264 REMARK 3 T TENSOR REMARK 3 T11: 0.5332 T22: 0.3602 REMARK 3 T33: 0.3113 T12: -0.2658 REMARK 3 T13: -0.0197 T23: 0.0504 REMARK 3 L TENSOR REMARK 3 L11: 0.1285 L22: 0.3656 REMARK 3 L33: 0.2789 L12: 0.0611 REMARK 3 L13: 0.0792 L23: -0.0881 REMARK 3 S TENSOR REMARK 3 S11: 0.0118 S12: 0.0373 S13: -0.0570 REMARK 3 S21: -0.1663 S22: 0.1258 S23: 0.1012 REMARK 3 S31: -0.0584 S32: 0.0073 S33: 0.0844 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4J35 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-FEB-13. REMARK 100 THE RCSB ID CODE IS RCSB077536. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44253 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.783 REMARK 200 RESOLUTION RANGE LOW (A) : 47.464 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.01 M NICL2, 0.1 M TRIS PH 8.5, 8% REMARK 280 PEG MME 2000, VAPOR DIFFUSION REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.26200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 136.52400 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 136.52400 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 68.26200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -78.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 68.26200 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 99 CG CD OE1 OE2 REMARK 470 LYS A 108 CG CD CE NZ REMARK 470 ARG A 148 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH11 ARG A 164 O HOH A 642 1.26 REMARK 500 NH1 ARG A 164 O HOH A 642 1.84 REMARK 500 OH TYR A 154 O HOH A 649 1.93 REMARK 500 OD2 ASP A 257 O HOH A 607 1.96 REMARK 500 O HOH A 519 O HOH A 575 1.98 REMARK 500 O HOH A 617 O HOH A 623 2.02 REMARK 500 O THR A 135 O HOH A 609 2.10 REMARK 500 NH1 ARG A 54 O HOH A 637 2.12 REMARK 500 O GLU A 99 O HOH A 651 2.17 REMARK 500 O HOH A 643 O HOH A 644 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 103 52.67 27.55 REMARK 500 VAL A 315 -51.06 -128.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 402 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 23 NE2 REMARK 620 2 HIS A 21 NE2 106.8 REMARK 620 3 ASP A 264 OD1 90.5 89.1 REMARK 620 4 KCX A 143 OQ1 81.7 97.2 171.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 401 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 204 NE2 REMARK 620 2 HIS A 176 ND1 101.7 REMARK 620 3 KCX A 143 OQ2 112.4 109.2 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4J2M RELATED DB: PDB DBREF 4J35 A 1 323 UNP Q9RVU2 Q9RVU2_DEIRA 1 323 SEQADV 4J35 LEU A 28 UNP Q9RVU2 TYR 28 ENGINEERED MUTATION SEQADV 4J35 ASN A 71 UNP Q9RVU2 ASP 71 ENGINEERED MUTATION SEQADV 4J35 PHE A 97 UNP Q9RVU2 TYR 97 ENGINEERED MUTATION SEQADV 4J35 GLY A 101 UNP Q9RVU2 GLU 101 ENGINEERED MUTATION SEQADV 4J35 ASP A 179 UNP Q9RVU2 GLU 179 ENGINEERED MUTATION SEQADV 4J35 LEU A 235 UNP Q9RVU2 VAL 235 ENGINEERED MUTATION SEQADV 4J35 LEU A 274 UNP Q9RVU2 PRO 274 ENGINEERED MUTATION SEQRES 1 A 323 MET THR ALA GLN THR VAL THR GLY ALA VAL ALA ALA ALA SEQRES 2 A 323 GLN LEU GLY ALA THR LEU PRO HIS GLU HIS VAL ILE PHE SEQRES 3 A 323 GLY LEU PRO GLY TYR ALA GLY ASP VAL THR LEU GLY PRO SEQRES 4 A 323 PHE ASP HIS ALA ALA ALA LEU ALA SER CYS THR GLU THR SEQRES 5 A 323 ALA ARG ALA LEU LEU ALA ARG GLY ILE GLN THR VAL VAL SEQRES 6 A 323 ASP ALA THR PRO ASN ASN CYS GLY ARG ASN PRO ALA PHE SEQRES 7 A 323 LEU ARG GLU VAL SER GLU ALA THR GLY LEU GLN ILE LEU SEQRES 8 A 323 CYS ALA THR GLY PHE PHE TYR GLU GLY GLY GLY ALA THR SEQRES 9 A 323 THR TYR PHE LYS PHE ARG ALA SER LEU GLY ASP ALA GLU SEQRES 10 A 323 SER GLU ILE TYR GLU MET MET ARG THR GLU VAL THR GLU SEQRES 11 A 323 GLY ILE ALA GLY THR GLY ILE ARG ALA GLY VAL ILE KCX SEQRES 12 A 323 LEU ALA SER SER ARG ASP ALA ILE THR PRO TYR GLU GLN SEQRES 13 A 323 LEU PHE PHE ARG ALA ALA ALA ARG VAL GLN ARG GLU THR SEQRES 14 A 323 GLY VAL PRO ILE ILE THR HIS THR GLN ASP GLY GLN GLN SEQRES 15 A 323 GLY PRO GLN GLN ALA GLU LEU LEU THR SER LEU GLY ALA SEQRES 16 A 323 ASP PRO ALA ARG ILE MET ILE GLY HIS MET ASP GLY ASN SEQRES 17 A 323 THR ASP PRO ALA TYR HIS ARG GLU THR LEU ARG HIS GLY SEQRES 18 A 323 VAL SER ILE ALA PHE ASP ARG ILE GLY LEU GLN GLY MET SEQRES 19 A 323 LEU GLY THR PRO THR ASP ALA GLU ARG LEU SER VAL LEU SEQRES 20 A 323 THR THR LEU LEU GLY GLU GLY TYR ALA ASP ARG LEU LEU SEQRES 21 A 323 LEU SER HIS ASP SER ILE TRP HIS TRP LEU GLY ARG PRO SEQRES 22 A 323 LEU ALA ILE PRO GLU ALA ALA LEU PRO ALA VAL LYS ASP SEQRES 23 A 323 TRP HIS PRO LEU HIS ILE SER ASP ASP ILE LEU PRO ASP SEQRES 24 A 323 LEU ARG ARG ARG GLY ILE THR GLU GLU GLN VAL GLY GLN SEQRES 25 A 323 MET THR VAL GLY ASN PRO ALA ARG LEU PHE GLY MODRES 4J35 KCX A 143 LYS LYSINE NZ-CARBOXYLIC ACID HET KCX A 143 12 HET CO A 401 1 HET CO A 402 1 HETNAM KCX LYSINE NZ-CARBOXYLIC ACID HETNAM CO COBALT (II) ION FORMUL 1 KCX C7 H14 N2 O4 FORMUL 2 CO 2(CO 2+) FORMUL 4 HOH *173(H2 O) HELIX 1 1 ALA A 11 LEU A 15 5 5 HELIX 2 2 GLY A 30 VAL A 35 5 6 HELIX 3 3 ASP A 41 ARG A 59 1 19 HELIX 4 4 ASN A 75 GLY A 87 1 13 HELIX 5 5 THR A 104 GLY A 114 1 11 HELIX 6 6 ASP A 115 GLU A 130 1 16 HELIX 7 7 THR A 152 GLY A 170 1 19 HELIX 8 8 GLN A 182 LEU A 193 1 12 HELIX 9 9 ASP A 196 ALA A 198 5 3 HELIX 10 10 HIS A 204 ASN A 208 5 5 HELIX 11 11 ASP A 210 ARG A 219 1 10 HELIX 12 12 THR A 239 GLY A 252 1 14 HELIX 13 13 GLU A 253 GLY A 254 5 2 HELIX 14 14 TYR A 255 ASP A 257 5 3 HELIX 15 15 PRO A 277 ALA A 279 5 3 HELIX 16 16 ALA A 280 LYS A 285 1 6 HELIX 17 17 LEU A 290 ASP A 295 1 6 HELIX 18 18 ASP A 295 GLY A 304 1 10 HELIX 19 19 THR A 306 VAL A 315 1 10 HELIX 20 20 VAL A 315 GLY A 323 1 9 SHEET 1 A 2 ALA A 3 THR A 5 0 SHEET 2 A 2 GLY A 8 VAL A 10 -1 O VAL A 10 N ALA A 3 SHEET 1 B 4 GLN A 89 LEU A 91 0 SHEET 2 B 4 ILE A 61 ASP A 66 1 N ASP A 66 O LEU A 91 SHEET 3 B 4 ALA A 17 PHE A 26 1 N LEU A 19 O VAL A 65 SHEET 4 B 4 ILE A 266 TRP A 269 1 O TRP A 267 N HIS A 23 SHEET 1 C 6 ALA A 93 GLY A 95 0 SHEET 2 C 6 VAL A 141 ALA A 145 1 O KCX A 143 N THR A 94 SHEET 3 C 6 ILE A 173 HIS A 176 1 O ILE A 174 N ILE A 142 SHEET 4 C 6 ILE A 200 ILE A 202 1 O MET A 201 N ILE A 173 SHEET 5 C 6 SER A 223 PHE A 226 1 O SER A 223 N ILE A 202 SHEET 6 C 6 LEU A 259 LEU A 261 1 O LEU A 260 N PHE A 226 LINK C ILE A 142 N KCX A 143 1555 1555 1.32 LINK C KCX A 143 N LEU A 144 1555 1555 1.33 LINK NE2 HIS A 23 CO CO A 402 1555 1555 1.96 LINK NE2 HIS A 204 CO CO A 401 1555 1555 2.00 LINK ND1 HIS A 176 CO CO A 401 1555 1555 2.15 LINK NE2 HIS A 21 CO CO A 402 1555 1555 2.15 LINK OD1 ASP A 264 CO CO A 402 1555 1555 2.21 LINK OQ2 KCX A 143 CO CO A 401 1555 1555 1.77 LINK OQ1 KCX A 143 CO CO A 402 1555 1555 2.14 CISPEP 1 GLU A 99 GLY A 100 0 -1.13 SITE 1 AC1 5 KCX A 143 HIS A 176 HIS A 204 CO A 402 SITE 2 AC1 5 HOH A 665 SITE 1 AC2 5 HIS A 21 HIS A 23 KCX A 143 ASP A 264 SITE 2 AC2 5 CO A 401 CRYST1 61.853 61.853 204.786 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016167 0.009334 0.000000 0.00000 SCALE2 0.000000 0.018668 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004883 0.00000