HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 05-FEB-13 4J36 TITLE COCRYSTAL STRUCTURE OF KYNURENINE 3-MONOOXYGENASE IN COMPLEX WITH UPF TITLE 2 648 INHIBITOR(KMO-394UPF) COMPND MOL_ID: 1; COMPND 2 MOLECULE: KYNURENINE 3-MONOOXYGENASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 1-394; COMPND 5 SYNONYM: BIOSYNTHESIS OF NICOTINIC ACID PROTEIN 4, KYNURENINE 3- COMPND 6 HYDROXYLASE; COMPND 7 EC: 1.14.13.9; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: ATCC 204508 / S288C; SOURCE 6 GENE: BNA4, YBL098W, YBL0828 KEYWDS MONOOXYGENASE KYNURENINE UPF 648, OXIDOREDUCTASE-OXIDOREDUCTASE KEYWDS 2 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.AMARAL,C.LEVY,D.J.HEYES,P.LAFITE,T.F.OUTEIRO,F.GIORGINI,D.LEYS, AUTHOR 2 N.S.SCRUTTON REVDAT 4 28-FEB-24 4J36 1 REMARK SEQADV REVDAT 3 01-MAY-13 4J36 1 JRNL REVDAT 2 24-APR-13 4J36 1 REMARK REVDAT 1 10-APR-13 4J36 0 JRNL AUTH M.AMARAL,C.LEVY,D.J.HEYES,P.LAFITE,T.F.OUTEIRO,F.GIORGINI, JRNL AUTH 2 D.LEYS,N.S.SCRUTTON JRNL TITL STRUCTURAL BASIS OF KYNURENINE 3-MONOOXYGENASE INHIBITION. JRNL REF NATURE V. 496 382 2013 JRNL REFN ISSN 0028-0836 JRNL PMID 23575632 JRNL DOI 10.1038/NATURE12039 REMARK 2 REMARK 2 RESOLUTION. 2.13 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8_1069 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.13 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.68 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.920 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 55563 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 2820 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 58.6989 - 5.7800 0.99 2698 146 0.1735 0.2014 REMARK 3 2 5.7800 - 4.5883 0.99 2653 147 0.1568 0.1905 REMARK 3 3 4.5883 - 4.0085 0.99 2643 139 0.1399 0.1603 REMARK 3 4 4.0085 - 3.6420 0.99 2636 134 0.1652 0.2155 REMARK 3 5 3.6420 - 3.3810 0.99 2652 149 0.1840 0.2120 REMARK 3 6 3.3810 - 3.1817 0.99 2618 134 0.2045 0.2936 REMARK 3 7 3.1817 - 3.0224 0.99 2656 146 0.2182 0.2726 REMARK 3 8 3.0224 - 2.8908 0.99 2638 112 0.2209 0.2608 REMARK 3 9 2.8908 - 2.7795 0.99 2612 161 0.2148 0.2514 REMARK 3 10 2.7795 - 2.6836 0.99 2597 173 0.2216 0.2703 REMARK 3 11 2.6836 - 2.5997 1.00 2631 147 0.2237 0.2894 REMARK 3 12 2.5997 - 2.5254 1.00 2640 146 0.2238 0.2590 REMARK 3 13 2.5254 - 2.4589 1.00 2671 138 0.2422 0.2848 REMARK 3 14 2.4589 - 2.3989 1.00 2638 141 0.2408 0.2950 REMARK 3 15 2.3989 - 2.3444 1.00 2619 140 0.2419 0.3034 REMARK 3 16 2.3444 - 2.2945 1.00 2642 128 0.2708 0.3358 REMARK 3 17 2.2945 - 2.2486 0.99 2625 129 0.3316 0.3737 REMARK 3 18 2.2486 - 2.2062 0.99 2654 126 0.3423 0.3472 REMARK 3 19 2.2062 - 2.1667 0.99 2596 140 0.3278 0.3902 REMARK 3 20 2.1667 - 2.1300 0.99 2624 144 0.3229 0.3474 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.340 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.93 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 6026 REMARK 3 ANGLE : 0.785 8146 REMARK 3 CHIRALITY : 0.055 887 REMARK 3 PLANARITY : 0.003 1034 REMARK 3 DIHEDRAL : 12.949 2258 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4J36 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-FEB-13. REMARK 100 THE DEPOSITION ID IS D_1000077537. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0725 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55595 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 58.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS WERE GROWN BY MIXING 200 NL REMARK 280 OF PROTEIN (BUFFER A) WITH 200 NL OF A RESERVOIR SOLUTION REMARK 280 CONTAINING 0.1 M IMIDAZOLE, PH 7.8, AND 11 % W/V POLYETHYLENE REMARK 280 GLYCOL 8K. THE UPF COMPLEX (KMO-393-UPF) WAS OBTAINED AS REMARK 280 DESCRIBED ABOVE. HOWEVER, PRIOR TO SETTING THE TRAYS THE PROTEIN REMARK 280 WAS PRE-INCUBATED WITH 1 MM UPF FOR ~30 MINUTES. ALL TRAYS WERE REMARK 280 INCUBATED AT 277 K, WITH CRYSTALS FORMING OVER A PERIOD OF ~72 H REMARK 280 , VAPOR DIFFUSION, SITTING DROP, PH 7.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 44.90500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLY A 98 REMARK 465 LEU A 99 REMARK 465 HIS A 100 REMARK 465 GLY A 101 REMARK 465 SER A 378 REMARK 465 HIS A 379 REMARK 465 ASP A 380 REMARK 465 VAL A 381 REMARK 465 THR A 382 REMARK 465 SER A 383 REMARK 465 LYS A 384 REMARK 465 ARG A 385 REMARK 465 PHE A 386 REMARK 465 LEU A 387 REMARK 465 LEU A 388 REMARK 465 ARG A 389 REMARK 465 LYS A 390 REMARK 465 LYS A 391 REMARK 465 LEU A 392 REMARK 465 ASP A 393 REMARK 465 ALA A 394 REMARK 465 MET B -20 REMARK 465 GLY B -19 REMARK 465 SER B -18 REMARK 465 SER B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 SER B -10 REMARK 465 SER B -9 REMARK 465 GLY B -8 REMARK 465 LEU B -7 REMARK 465 VAL B -6 REMARK 465 PRO B -5 REMARK 465 ARG B -4 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 GLY B 150 REMARK 465 GLU B 151 REMARK 465 ASP B 152 REMARK 465 LEU B 153 REMARK 465 LYS B 154 REMARK 465 HIS B 360 REMARK 465 LYS B 361 REMARK 465 ASP B 362 REMARK 465 LEU B 363 REMARK 465 VAL B 364 REMARK 465 SER B 365 REMARK 465 ILE B 366 REMARK 465 THR B 367 REMARK 465 GLU B 368 REMARK 465 LEU B 369 REMARK 465 ALA B 370 REMARK 465 LYS B 371 REMARK 465 ARG B 372 REMARK 465 ASN B 373 REMARK 465 TYR B 374 REMARK 465 LYS B 375 REMARK 465 GLU B 376 REMARK 465 MET B 377 REMARK 465 SER B 378 REMARK 465 HIS B 379 REMARK 465 ASP B 380 REMARK 465 VAL B 381 REMARK 465 THR B 382 REMARK 465 SER B 383 REMARK 465 LYS B 384 REMARK 465 ARG B 385 REMARK 465 PHE B 386 REMARK 465 LEU B 387 REMARK 465 LEU B 388 REMARK 465 ARG B 389 REMARK 465 LYS B 390 REMARK 465 LYS B 391 REMARK 465 LEU B 392 REMARK 465 ASP B 393 REMARK 465 ALA B 394 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS B -1 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASN B 44 O HOH B 556 2.13 REMARK 500 O HOH B 544 O HOH B 546 2.16 REMARK 500 O ASN A 44 O HOH A 527 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR A 302 CZ TYR A 302 OH -0.120 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 10 40.29 -106.41 REMARK 500 ASP A 66 89.42 -161.79 REMARK 500 SER A 123 -168.68 -117.16 REMARK 500 ASP A 141 -104.29 -117.22 REMARK 500 ASP A 152 -60.15 -94.74 REMARK 500 SER A 172 116.51 -38.89 REMARK 500 HIS A 317 50.93 -159.46 REMARK 500 PHE A 322 -61.90 64.34 REMARK 500 HIS B 100 -153.84 -105.11 REMARK 500 ASP B 141 -101.87 -111.90 REMARK 500 HIS B 227 -73.94 72.85 REMARK 500 LYS B 300 130.40 -170.13 REMARK 500 ASP B 347 96.63 -68.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1HR B 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4J2W RELATED DB: PDB REMARK 900 RELATED ID: 4J31 RELATED DB: PDB REMARK 900 RELATED ID: 4J33 RELATED DB: PDB REMARK 900 RELATED ID: 4J34 RELATED DB: PDB DBREF 4J36 A 1 394 UNP P38169 KMO_YEAST 1 394 DBREF 4J36 B 1 394 UNP P38169 KMO_YEAST 1 394 SEQADV 4J36 MET A -20 UNP P38169 EXPRESSION TAG SEQADV 4J36 GLY A -19 UNP P38169 EXPRESSION TAG SEQADV 4J36 SER A -18 UNP P38169 EXPRESSION TAG SEQADV 4J36 SER A -17 UNP P38169 EXPRESSION TAG SEQADV 4J36 HIS A -16 UNP P38169 EXPRESSION TAG SEQADV 4J36 HIS A -15 UNP P38169 EXPRESSION TAG SEQADV 4J36 HIS A -14 UNP P38169 EXPRESSION TAG SEQADV 4J36 HIS A -13 UNP P38169 EXPRESSION TAG SEQADV 4J36 HIS A -12 UNP P38169 EXPRESSION TAG SEQADV 4J36 HIS A -11 UNP P38169 EXPRESSION TAG SEQADV 4J36 SER A -10 UNP P38169 EXPRESSION TAG SEQADV 4J36 SER A -9 UNP P38169 EXPRESSION TAG SEQADV 4J36 GLY A -8 UNP P38169 EXPRESSION TAG SEQADV 4J36 LEU A -7 UNP P38169 EXPRESSION TAG SEQADV 4J36 VAL A -6 UNP P38169 EXPRESSION TAG SEQADV 4J36 PRO A -5 UNP P38169 EXPRESSION TAG SEQADV 4J36 ARG A -4 UNP P38169 EXPRESSION TAG SEQADV 4J36 GLY A -3 UNP P38169 EXPRESSION TAG SEQADV 4J36 SER A -2 UNP P38169 EXPRESSION TAG SEQADV 4J36 HIS A -1 UNP P38169 EXPRESSION TAG SEQADV 4J36 MET A 0 UNP P38169 EXPRESSION TAG SEQADV 4J36 MET B -20 UNP P38169 EXPRESSION TAG SEQADV 4J36 GLY B -19 UNP P38169 EXPRESSION TAG SEQADV 4J36 SER B -18 UNP P38169 EXPRESSION TAG SEQADV 4J36 SER B -17 UNP P38169 EXPRESSION TAG SEQADV 4J36 HIS B -16 UNP P38169 EXPRESSION TAG SEQADV 4J36 HIS B -15 UNP P38169 EXPRESSION TAG SEQADV 4J36 HIS B -14 UNP P38169 EXPRESSION TAG SEQADV 4J36 HIS B -13 UNP P38169 EXPRESSION TAG SEQADV 4J36 HIS B -12 UNP P38169 EXPRESSION TAG SEQADV 4J36 HIS B -11 UNP P38169 EXPRESSION TAG SEQADV 4J36 SER B -10 UNP P38169 EXPRESSION TAG SEQADV 4J36 SER B -9 UNP P38169 EXPRESSION TAG SEQADV 4J36 GLY B -8 UNP P38169 EXPRESSION TAG SEQADV 4J36 LEU B -7 UNP P38169 EXPRESSION TAG SEQADV 4J36 VAL B -6 UNP P38169 EXPRESSION TAG SEQADV 4J36 PRO B -5 UNP P38169 EXPRESSION TAG SEQADV 4J36 ARG B -4 UNP P38169 EXPRESSION TAG SEQADV 4J36 GLY B -3 UNP P38169 EXPRESSION TAG SEQADV 4J36 SER B -2 UNP P38169 EXPRESSION TAG SEQADV 4J36 HIS B -1 UNP P38169 EXPRESSION TAG SEQADV 4J36 MET B 0 UNP P38169 EXPRESSION TAG SEQRES 1 A 415 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 415 LEU VAL PRO ARG GLY SER HIS MET MET SER GLU SER VAL SEQRES 3 A 415 ALA ILE ILE GLY ALA GLY LEU VAL GLY CYS LEU ALA ALA SEQRES 4 A 415 LEU ALA PHE SER LYS GLU GLY TYR ASN VAL THR LEU TYR SEQRES 5 A 415 ASP PHE ARG GLN ASP PRO ARG LEU ASP THR THR LYS ASN SEQRES 6 A 415 LYS ASN LEU LYS SER ILE ASN LEU ALA ILE SER ALA ARG SEQRES 7 A 415 GLY ILE ASP ALA LEU LYS SER ILE ASP PRO ASP ALA CYS SEQRES 8 A 415 GLU HIS ILE LEU GLN ASP MET ILE PRO MET LYS GLY ARG SEQRES 9 A 415 MET ILE HIS ASP LEU LYS GLY ARG GLN GLU SER GLN LEU SEQRES 10 A 415 TYR GLY LEU HIS GLY GLU ALA ILE ASN SER ILE ASN ARG SEQRES 11 A 415 SER VAL LEU ASN ASN SER LEU LEU ASP GLU LEU GLU LYS SEQRES 12 A 415 SER THR THR GLU LEU LYS PHE GLY HIS LYS LEU VAL LYS SEQRES 13 A 415 ILE GLU TRP THR ASP ASP LYS GLN ILE CYS HIS PHE ALA SEQRES 14 A 415 ILE GLY GLU ASP LEU LYS THR PRO HIS THR GLU LYS TYR SEQRES 15 A 415 ASP PHE VAL ILE GLY CYS ASP GLY ALA TYR SER ALA THR SEQRES 16 A 415 ARG SER GLN MET GLN ARG LYS VAL GLU MET ASP PHE SER SEQRES 17 A 415 GLN GLU TYR MET ASN LEU ARG TYR ILE GLU LEU TYR ILE SEQRES 18 A 415 PRO PRO THR GLU GLU PHE LYS PRO ASN TYR GLY GLY ASN SEQRES 19 A 415 PHE ALA ILE ALA PRO ASP HIS LEU HIS ILE TRP PRO ARG SEQRES 20 A 415 HIS LYS PHE MET LEU ILE ALA LEU ALA ASN SER ASP GLY SEQRES 21 A 415 SER PHE THR SER THR PHE PHE GLY SER LYS ASP GLN ILE SEQRES 22 A 415 SER ASP LEU ILE THR SER LYS SER ARG VAL ARG GLU PHE SEQRES 23 A 415 LEU ILE GLU ASN PHE PRO ASP ILE ILE ASN ILE MET ASP SEQRES 24 A 415 LEU ASP ASP ALA VAL LYS ARG PHE ILE THR TYR PRO LYS SEQRES 25 A 415 GLU SER LEU VAL CYS VAL ASN CYS LYS PRO TYR ASP VAL SEQRES 26 A 415 PRO GLY GLY LYS ALA ILE LEU LEU GLY ASP ALA ALA HIS SEQRES 27 A 415 ALA MET VAL PRO PHE TYR GLY GLN GLY MET ASN CYS GLY SEQRES 28 A 415 PHE GLU ASP VAL ARG ILE LEU MET ALA LEU LEU LYS LYS SEQRES 29 A 415 HIS SER GLY ASP ARG SER ARG ALA PHE THR GLU TYR THR SEQRES 30 A 415 GLN THR ARG HIS LYS ASP LEU VAL SER ILE THR GLU LEU SEQRES 31 A 415 ALA LYS ARG ASN TYR LYS GLU MET SER HIS ASP VAL THR SEQRES 32 A 415 SER LYS ARG PHE LEU LEU ARG LYS LYS LEU ASP ALA SEQRES 1 B 415 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 415 LEU VAL PRO ARG GLY SER HIS MET MET SER GLU SER VAL SEQRES 3 B 415 ALA ILE ILE GLY ALA GLY LEU VAL GLY CYS LEU ALA ALA SEQRES 4 B 415 LEU ALA PHE SER LYS GLU GLY TYR ASN VAL THR LEU TYR SEQRES 5 B 415 ASP PHE ARG GLN ASP PRO ARG LEU ASP THR THR LYS ASN SEQRES 6 B 415 LYS ASN LEU LYS SER ILE ASN LEU ALA ILE SER ALA ARG SEQRES 7 B 415 GLY ILE ASP ALA LEU LYS SER ILE ASP PRO ASP ALA CYS SEQRES 8 B 415 GLU HIS ILE LEU GLN ASP MET ILE PRO MET LYS GLY ARG SEQRES 9 B 415 MET ILE HIS ASP LEU LYS GLY ARG GLN GLU SER GLN LEU SEQRES 10 B 415 TYR GLY LEU HIS GLY GLU ALA ILE ASN SER ILE ASN ARG SEQRES 11 B 415 SER VAL LEU ASN ASN SER LEU LEU ASP GLU LEU GLU LYS SEQRES 12 B 415 SER THR THR GLU LEU LYS PHE GLY HIS LYS LEU VAL LYS SEQRES 13 B 415 ILE GLU TRP THR ASP ASP LYS GLN ILE CYS HIS PHE ALA SEQRES 14 B 415 ILE GLY GLU ASP LEU LYS THR PRO HIS THR GLU LYS TYR SEQRES 15 B 415 ASP PHE VAL ILE GLY CYS ASP GLY ALA TYR SER ALA THR SEQRES 16 B 415 ARG SER GLN MET GLN ARG LYS VAL GLU MET ASP PHE SER SEQRES 17 B 415 GLN GLU TYR MET ASN LEU ARG TYR ILE GLU LEU TYR ILE SEQRES 18 B 415 PRO PRO THR GLU GLU PHE LYS PRO ASN TYR GLY GLY ASN SEQRES 19 B 415 PHE ALA ILE ALA PRO ASP HIS LEU HIS ILE TRP PRO ARG SEQRES 20 B 415 HIS LYS PHE MET LEU ILE ALA LEU ALA ASN SER ASP GLY SEQRES 21 B 415 SER PHE THR SER THR PHE PHE GLY SER LYS ASP GLN ILE SEQRES 22 B 415 SER ASP LEU ILE THR SER LYS SER ARG VAL ARG GLU PHE SEQRES 23 B 415 LEU ILE GLU ASN PHE PRO ASP ILE ILE ASN ILE MET ASP SEQRES 24 B 415 LEU ASP ASP ALA VAL LYS ARG PHE ILE THR TYR PRO LYS SEQRES 25 B 415 GLU SER LEU VAL CYS VAL ASN CYS LYS PRO TYR ASP VAL SEQRES 26 B 415 PRO GLY GLY LYS ALA ILE LEU LEU GLY ASP ALA ALA HIS SEQRES 27 B 415 ALA MET VAL PRO PHE TYR GLY GLN GLY MET ASN CYS GLY SEQRES 28 B 415 PHE GLU ASP VAL ARG ILE LEU MET ALA LEU LEU LYS LYS SEQRES 29 B 415 HIS SER GLY ASP ARG SER ARG ALA PHE THR GLU TYR THR SEQRES 30 B 415 GLN THR ARG HIS LYS ASP LEU VAL SER ILE THR GLU LEU SEQRES 31 B 415 ALA LYS ARG ASN TYR LYS GLU MET SER HIS ASP VAL THR SEQRES 32 B 415 SER LYS ARG PHE LEU LEU ARG LYS LYS LEU ASP ALA HET FAD A 401 53 HET FAD B 401 53 HET 1HR B 402 16 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM 1HR (1S,2S)-2-(3,4-DICHLOROBENZOYL)CYCLOPROPANECARBOXYLIC HETNAM 2 1HR ACID FORMUL 3 FAD 2(C27 H33 N9 O15 P2) FORMUL 5 1HR C11 H8 CL2 O3 FORMUL 6 HOH *359(H2 O) HELIX 1 1 GLY A 11 GLU A 24 1 14 HELIX 2 2 SER A 55 ASP A 66 1 12 HELIX 3 3 ASP A 66 LEU A 74 1 9 HELIX 4 4 ARG A 109 GLU A 121 1 13 HELIX 5 5 SER A 172 VAL A 182 1 11 HELIX 6 6 LYS A 249 ASP A 254 1 6 HELIX 7 7 SER A 258 PHE A 270 1 13 HELIX 8 8 PRO A 271 ILE A 274 5 4 HELIX 9 9 ASP A 278 THR A 288 1 11 HELIX 10 10 GLY A 313 ALA A 318 1 6 HELIX 11 11 GLN A 325 HIS A 344 1 20 HELIX 12 12 ASP A 347 GLU A 376 1 30 HELIX 13 13 GLY B 11 GLU B 24 1 14 HELIX 14 14 SER B 55 SER B 64 1 10 HELIX 15 15 ALA B 69 GLN B 75 1 7 HELIX 16 16 ARG B 109 GLU B 121 1 13 HELIX 17 17 SER B 172 ARG B 180 1 9 HELIX 18 18 SER B 248 ILE B 256 1 9 HELIX 19 19 SER B 258 PHE B 270 1 13 HELIX 20 20 PRO B 271 ILE B 274 5 4 HELIX 21 21 ASP B 278 TYR B 289 1 12 HELIX 22 22 GLY B 313 ALA B 316 5 4 HELIX 23 23 VAL B 320 GLY B 324 5 5 HELIX 24 24 GLN B 325 HIS B 344 1 20 HELIX 25 25 ASP B 347 ARG B 359 1 13 SHEET 1 A 6 GLU A 126 PHE A 129 0 SHEET 2 A 6 ASN A 27 ASP A 32 1 N LEU A 30 O GLU A 126 SHEET 3 A 6 SER A 4 ILE A 8 1 N ILE A 7 O THR A 29 SHEET 4 A 6 PHE A 163 GLY A 166 1 O ILE A 165 N ALA A 6 SHEET 5 A 6 ALA A 309 LEU A 311 1 O ILE A 310 N GLY A 166 SHEET 6 A 6 ASP A 303 VAL A 304 -1 N VAL A 304 O ALA A 309 SHEET 1 B 3 ASN A 51 ILE A 54 0 SHEET 2 B 3 ASN A 105 ASN A 108 -1 O ASN A 105 N ILE A 54 SHEET 3 B 3 ILE A 78 PRO A 79 -1 N ILE A 78 O SER A 106 SHEET 1 C 6 GLN A 92 LEU A 96 0 SHEET 2 C 6 GLY A 82 HIS A 86 -1 N ARG A 83 O GLN A 95 SHEET 3 C 6 HIS A 220 PRO A 225 1 O LEU A 221 N MET A 84 SHEET 4 C 6 MET A 230 ALA A 235 -1 O LEU A 231 N TRP A 224 SHEET 5 C 6 PHE A 241 SER A 248 -1 O PHE A 246 N MET A 230 SHEET 6 C 6 LEU A 193 ILE A 200 -1 N LEU A 198 O SER A 243 SHEET 1 D 3 HIS A 131 GLU A 137 0 SHEET 2 D 3 GLN A 143 ILE A 149 -1 O HIS A 146 N LYS A 135 SHEET 3 D 3 THR A 155 TYR A 161 -1 O TYR A 161 N GLN A 143 SHEET 1 E 8 VAL A 295 LYS A 300 0 SHEET 2 E 8 ASP A 185 TYR A 190 -1 N ASP A 185 O LYS A 300 SHEET 3 E 8 ASP B 185 ILE B 200 -1 O PHE B 186 N GLN A 188 SHEET 4 E 8 PHE B 241 GLY B 247 -1 O GLY B 247 N ARG B 194 SHEET 5 E 8 MET B 230 ALA B 235 -1 N LEU B 234 O THR B 242 SHEET 6 E 8 HIS B 220 PRO B 225 -1 N TRP B 224 O LEU B 231 SHEET 7 E 8 GLY B 82 HIS B 86 1 N GLY B 82 O LEU B 221 SHEET 8 E 8 GLN B 92 LEU B 96 -1 O GLU B 93 N ILE B 85 SHEET 1 F 4 VAL A 295 LYS A 300 0 SHEET 2 F 4 ASP A 185 TYR A 190 -1 N ASP A 185 O LYS A 300 SHEET 3 F 4 ASP B 185 ILE B 200 -1 O PHE B 186 N GLN A 188 SHEET 4 F 4 GLU B 292 LYS B 300 -1 O LYS B 300 N ASP B 185 SHEET 1 G 6 GLU B 126 PHE B 129 0 SHEET 2 G 6 ASN B 27 ASP B 32 1 N LEU B 30 O LYS B 128 SHEET 3 G 6 SER B 4 ILE B 8 1 N ILE B 7 O THR B 29 SHEET 4 G 6 PHE B 163 GLY B 166 1 O ILE B 165 N ILE B 8 SHEET 5 G 6 ALA B 309 LEU B 311 1 O ILE B 310 N GLY B 166 SHEET 6 G 6 ASP B 303 VAL B 304 -1 N VAL B 304 O ALA B 309 SHEET 1 H 3 ASN B 51 ILE B 54 0 SHEET 2 H 3 ILE B 104 ASN B 108 -1 O ASN B 105 N ILE B 54 SHEET 3 H 3 ILE B 78 MET B 80 -1 N ILE B 78 O SER B 106 SHEET 1 I 3 LYS B 132 GLU B 137 0 SHEET 2 I 3 GLN B 143 ALA B 148 -1 O HIS B 146 N LYS B 135 SHEET 3 I 3 THR B 158 TYR B 161 -1 O TYR B 161 N GLN B 143 CISPEP 1 LYS A 300 PRO A 301 0 -0.95 CISPEP 2 LYS B 300 PRO B 301 0 0.99 SITE 1 AC1 33 ILE A 8 GLY A 9 GLY A 11 LEU A 12 SITE 2 AC1 33 VAL A 13 ASP A 32 PHE A 33 ARG A 34 SITE 3 AC1 33 LEU A 52 ALA A 53 ARG A 109 HIS A 131 SITE 4 AC1 33 LYS A 132 LEU A 133 CYS A 167 ASP A 168 SITE 5 AC1 33 GLY A 169 ALA A 173 GLY A 313 ASP A 314 SITE 6 AC1 33 GLN A 325 GLY A 326 MET A 327 ASN A 328 SITE 7 AC1 33 HOH A 501 HOH A 508 HOH A 531 HOH A 548 SITE 8 AC1 33 HOH A 626 HOH A 672 HOH A 710 HOH A 716 SITE 9 AC1 33 HOH A 717 SITE 1 AC2 34 GLY B 9 GLY B 11 LEU B 12 VAL B 13 SITE 2 AC2 34 ASP B 32 PHE B 33 ARG B 34 ASN B 46 SITE 3 AC2 34 LEU B 52 ALA B 53 ARG B 109 HIS B 131 SITE 4 AC2 34 LYS B 132 LEU B 133 CYS B 167 ASP B 168 SITE 5 AC2 34 GLY B 169 ALA B 173 TYR B 195 GLY B 313 SITE 6 AC2 34 ASP B 314 GLY B 324 GLN B 325 GLY B 326 SITE 7 AC2 34 MET B 327 ASN B 328 1HR B 402 HOH B 501 SITE 8 AC2 34 HOH B 506 HOH B 578 HOH B 600 HOH B 604 SITE 9 AC2 34 HOH B 629 HOH B 640 SITE 1 AC3 11 ALA B 53 ARG B 83 TYR B 97 ILE B 104 SITE 2 AC3 11 LEU B 221 ILE B 232 PHE B 246 PRO B 321 SITE 3 AC3 11 PHE B 322 TYR B 323 FAD B 401 CRYST1 72.970 89.810 82.800 90.00 110.60 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013704 0.000000 0.005151 0.00000 SCALE2 0.000000 0.011135 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012902 0.00000