HEADER OXIDOREDUCTASE 06-FEB-13 4J3R TITLE CRYSTAL STRUCTURE OF CATECHOL OXIDASE FROM ASPERGILLUS ORYZAE, SOAKED TITLE 2 IN 4-TERT-BUTYLCATECHOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: CATECHOL OXIDASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 26-408; COMPND 5 EC: 1.10.3.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; SOURCE 3 ORGANISM_COMMON: YELLOW KOJI MOLD; SOURCE 4 ORGANISM_TAXID: 5062; SOURCE 5 STRAIN: VTT-D-88348; SOURCE 6 GENE: 5990879; SOURCE 7 EXPRESSION_SYSTEM: TRICHODERMA REESEI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 51453; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: RUTC-30; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PGF007 KEYWDS CATECHOL OXIDASE, TYPE-3 COPPER CENTER, BINUCLEAR COPPER ENZYME, KEYWDS 2 GLYCOSYLATED, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR N.HAKULINEN,C.GASPARETTI,H.KALJUNEN,J.ROUVINEN REVDAT 4 20-SEP-23 4J3R 1 HETSYN REVDAT 3 29-JUL-20 4J3R 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 04-DEC-13 4J3R 1 JRNL REVDAT 1 27-NOV-13 4J3R 0 JRNL AUTH N.HAKULINEN,C.GASPARETTI,H.KALJUNEN,K.KRUUS,J.ROUVINEN JRNL TITL THE CRYSTAL STRUCTURE OF AN EXTRACELLULAR CATECHOL OXIDASE JRNL TITL 2 FROM THE ASCOMYCETE FUNGUS ASPERGILLUS ORYZAE. JRNL REF J.BIOL.INORG.CHEM. V. 18 917 2013 JRNL REFN ISSN 0949-8257 JRNL PMID 24043469 JRNL DOI 10.1007/S00775-013-1038-9 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.87 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.020 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 35110 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1755 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.8657 - 5.1456 0.99 2684 141 0.1741 0.2223 REMARK 3 2 5.1456 - 4.0960 0.99 2599 137 0.1577 0.1481 REMARK 3 3 4.0960 - 3.5817 0.99 2570 135 0.1645 0.1918 REMARK 3 4 3.5817 - 3.2557 1.00 2589 136 0.1894 0.2306 REMARK 3 5 3.2557 - 3.0233 1.00 2552 134 0.2064 0.2738 REMARK 3 6 3.0233 - 2.8455 1.00 2569 135 0.2074 0.2256 REMARK 3 7 2.8455 - 2.7034 1.00 2563 135 0.2187 0.2561 REMARK 3 8 2.7034 - 2.5860 1.00 2541 134 0.2186 0.2831 REMARK 3 9 2.5860 - 2.4866 1.00 2545 134 0.2235 0.2648 REMARK 3 10 2.4866 - 2.4010 1.00 2561 135 0.2408 0.3064 REMARK 3 11 2.4010 - 2.3260 0.99 2544 134 0.2575 0.3098 REMARK 3 12 2.3260 - 2.2596 0.99 2533 133 0.2672 0.3289 REMARK 3 13 2.2596 - 2.2002 0.99 2505 132 0.2857 0.3117 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.250 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.019 3088 REMARK 3 ANGLE : 1.156 4218 REMARK 3 CHIRALITY : 0.072 463 REMARK 3 PLANARITY : 0.005 536 REMARK 3 DIHEDRAL : 16.827 1121 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4J3R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-FEB-13. REMARK 100 THE DEPOSITION ID IS D_1000077558. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9700 REMARK 200 MONOCHROMATOR : SI (311), SI (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35145 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.35500 REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4J3P REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7 M AMMONIUM SULFATE, 5% GLYCEROL REMARK 280 AND 0.1 M SODIUM ACETATE AT PH 4.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.19333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.09667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 28.09667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 56.19333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 ALA A 2 REMARK 465 THR A 3 REMARK 465 GLY A 38 REMARK 465 GLY A 39 REMARK 465 SER A 40 REMARK 465 GLU A 41 REMARK 465 SER A 42 REMARK 465 LYS A 43 REMARK 465 ARG A 44 REMARK 465 GLY A 45 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O3 NAG B 2 O HOH A 2214 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 165 49.60 -91.45 REMARK 500 SER A 166 176.21 56.28 REMARK 500 ALA A 215 73.13 -162.31 REMARK 500 ASN A 233 59.96 -149.62 REMARK 500 ASP A 326 68.57 -164.38 REMARK 500 THR A 337 -167.14 -120.52 REMARK 500 CYS A 379 75.92 -163.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A2001 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 102 NE2 REMARK 620 2 HIS A 110 NE2 117.3 REMARK 620 3 HIS A 119 NE2 128.1 106.7 REMARK 620 4 OXY A2003 O2 120.6 77.2 93.9 REMARK 620 5 OXY A2003 O1 96.3 78.6 119.0 26.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A2002 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 284 NE2 REMARK 620 2 HIS A 288 NE2 94.0 REMARK 620 3 HIS A 312 NE2 107.1 128.8 REMARK 620 4 OXY A2003 O2 102.4 117.0 103.5 REMARK 620 5 OXY A2003 O1 111.8 90.5 121.3 27.1 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4J3P RELATED DB: PDB REMARK 900 RELATED ID: 4J3Q RELATED DB: PDB DBREF 4J3R A 1 383 UNP Q2UNF9 Q2UNF9_ASPOR 26 408 SEQRES 1 A 383 ALA ALA THR ALA THR LEU PRO THR THR ALA SER SER SER SEQRES 2 A 383 THR ALA VAL ALA SER SER GLN LEU ASP GLN LEU ALA ASN SEQRES 3 A 383 PHE ALA TYR ASN VAL THR THR ASP SER VAL ALA GLY GLY SEQRES 4 A 383 SER GLU SER LYS ARG GLY GLY CYS THR LEU GLN ASN LEU SEQRES 5 A 383 ARG VAL ARG ARG ASP TRP ARG ALA PHE SER LYS THR GLN SEQRES 6 A 383 LYS LYS ASP TYR ILE ASN SER VAL LEU CYS LEU GLN LYS SEQRES 7 A 383 LEU PRO SER ARG THR PRO ALA HIS LEU ALA PRO GLY ALA SEQRES 8 A 383 ARG THR ARG TYR ASP ASP PHE VAL ALA THR HIS ILE ASN SEQRES 9 A 383 GLN THR GLN ILE ILE HIS TYR THR GLY THR PHE LEU ALA SEQRES 10 A 383 TRP HIS ARG TYR PHE ILE TYR GLU PHE GLU GLN ALA LEU SEQRES 11 A 383 ARG ASP GLU CYS SER TYR THR GLY ASP TYR PRO TYR TRP SEQRES 12 A 383 ASN TRP GLY ALA ASP ALA ASP ASN MET GLU LYS SER GLN SEQRES 13 A 383 VAL PHE ASP GLY SER GLU THR SER MET SER GLY ASN GLY SEQRES 14 A 383 GLU TYR ILE PRO ASN GLN GLY ASP ILE LYS LEU LEU LEU SEQRES 15 A 383 GLY ASN TYR PRO ALA ILE ASP LEU PRO PRO GLY SER GLY SEQRES 16 A 383 GLY GLY CYS VAL THR SER GLY PRO PHE LYS ASP TYR LYS SEQRES 17 A 383 LEU ASN LEU GLY PRO ALA ALA LEU SER LEU PRO GLY GLY SEQRES 18 A 383 ASN MET THR ALA ALA ALA ASN PRO LEU THR TYR ASN PRO SEQRES 19 A 383 ARG CYS MET LYS ARG SER LEU THR THR GLU ILE LEU GLN SEQRES 20 A 383 ARG TYR ASN THR PHE PRO LYS ILE VAL GLU LEU ILE LEU SEQRES 21 A 383 ASP SER ASP ASP ILE TRP ASP PHE GLN MET THR MET GLN SEQRES 22 A 383 GLY VAL PRO GLY SER GLY SER ILE GLY VAL HIS GLY GLY SEQRES 23 A 383 GLY HIS TYR SER MET GLY GLY ASP PRO GLY ARG ASP VAL SEQRES 24 A 383 TYR VAL SER PRO GLY ASP THR ALA PHE TRP LEU HIS HIS SEQRES 25 A 383 GLY MET ILE ASP ARG VAL TRP TRP ILE TRP GLN ASN LEU SEQRES 26 A 383 ASP LEU ARG LYS ARG GLN ASN ALA ILE SER GLY THR GLY SEQRES 27 A 383 THR PHE MET ASN ASN PRO ALA SER PRO ASN THR THR LEU SEQRES 28 A 383 ASP THR VAL ILE ASP LEU GLY TYR ALA ASN GLY GLY PRO SEQRES 29 A 383 ILE ALA MET ARG ASP LEU MET SER THR THR ALA GLY PRO SEQRES 30 A 383 PHE CYS TYR VAL TYR LEU MODRES 4J3R ASN A 104 ASN GLYCOSYLATION SITE MODRES 4J3R ASN A 30 ASN GLYCOSYLATION SITE MODRES 4J3R THR A 14 THR GLYCOSYLATION SITE MODRES 4J3R ASN A 348 ASN GLYCOSYLATION SITE MODRES 4J3R ASN A 222 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET BMA B 3 11 HET CU A2001 1 HET CU A2002 1 HET OXY A2003 2 HET NAG A2007 14 HET NAG A2008 14 HET NAG A2009 14 HET MAN A2010 11 HET SO4 A2011 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM CU COPPER (II) ION HETNAM OXY OXYGEN MOLECULE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 NAG 5(C8 H15 N O6) FORMUL 2 BMA C6 H12 O6 FORMUL 3 CU 2(CU 2+) FORMUL 5 OXY O2 FORMUL 9 MAN C6 H12 O6 FORMUL 10 SO4 O4 S 2- FORMUL 11 HOH *130(H2 O) HELIX 1 1 SER A 13 VAL A 36 1 24 HELIX 2 2 ARG A 59 PHE A 61 5 3 HELIX 3 3 SER A 62 GLN A 77 1 16 HELIX 4 4 THR A 93 THR A 106 1 14 HELIX 5 5 GLN A 107 ILE A 109 5 3 HELIX 6 6 THR A 114 CYS A 134 1 21 HELIX 7 7 ASN A 144 ALA A 149 5 6 HELIX 8 8 ASN A 151 SER A 155 5 5 HELIX 9 9 THR A 242 ASN A 250 1 9 HELIX 10 10 THR A 251 SER A 262 1 12 HELIX 11 11 ASP A 264 GLY A 274 1 11 HELIX 12 12 ILE A 281 SER A 290 1 10 HELIX 13 13 VAL A 301 THR A 306 5 6 HELIX 14 14 ALA A 307 LEU A 325 1 19 HELIX 15 15 ASP A 326 GLN A 331 1 6 HELIX 16 16 THR A 339 ASN A 343 5 5 HELIX 17 17 ARG A 368 MET A 371 5 4 SHEET 1 A 3 PRO A 141 TYR A 142 0 SHEET 2 A 3 ARG A 53 ASP A 57 1 N ARG A 56 O TYR A 142 SHEET 3 A 3 TYR A 380 LEU A 383 1 O VAL A 381 N ARG A 55 SHEET 1 B 2 GLY A 169 TYR A 171 0 SHEET 2 B 2 GLY A 196 VAL A 199 -1 O GLY A 197 N GLU A 170 SHEET 1 C 2 ILE A 178 LEU A 180 0 SHEET 2 C 2 ILE A 188 LEU A 190 -1 O ILE A 188 N LEU A 180 SHEET 1 D 2 LYS A 208 LEU A 209 0 SHEET 2 D 2 ARG A 235 CYS A 236 -1 O ARG A 235 N LEU A 209 SHEET 1 E 2 LEU A 216 SER A 217 0 SHEET 2 E 2 MET A 223 THR A 224 -1 O THR A 224 N LEU A 216 SHEET 1 F 2 VAL A 354 ILE A 355 0 SHEET 2 F 2 ILE A 365 ALA A 366 -1 O ILE A 365 N ILE A 355 SSBOND 1 CYS A 47 CYS A 379 1555 1555 2.05 SSBOND 2 CYS A 75 CYS A 134 1555 1555 2.06 SSBOND 3 CYS A 198 CYS A 236 1555 1555 2.06 LINK OG1 THR A 14 C1 MAN A2010 1555 1555 1.44 LINK ND2 ASN A 30 C1 NAG A2007 1555 1555 1.44 LINK ND2 ASN A 104 C1 NAG B 1 1555 1555 1.44 LINK ND2 ASN A 222 C1 NAG A2009 1555 1555 1.45 LINK ND2 ASN A 348 C1 NAG A2008 1555 1555 1.45 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.45 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.45 LINK NE2 HIS A 102 CU CU A2001 1555 1555 1.92 LINK NE2 HIS A 110 CU CU A2001 1555 1555 2.15 LINK NE2 HIS A 119 CU CU A2001 1555 1555 2.04 LINK NE2 HIS A 284 CU CU A2002 1555 1555 2.03 LINK NE2 HIS A 288 CU CU A2002 1555 1555 1.97 LINK NE2 HIS A 312 CU CU A2002 1555 1555 1.91 LINK CU CU A2001 O2 OXY A2003 1555 1555 2.09 LINK CU CU A2001 O1 OXY A2003 1555 1555 2.64 LINK CU CU A2002 O2 OXY A2003 1555 1555 2.32 LINK CU CU A2002 O1 OXY A2003 1555 1555 2.63 CISPEP 1 GLY A 212 PRO A 213 0 0.07 CISPEP 2 ASP A 294 PRO A 295 0 9.55 CISPEP 3 ASN A 343 PRO A 344 0 -11.28 CRYST1 119.070 119.070 84.290 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008398 0.004849 0.000000 0.00000 SCALE2 0.000000 0.009698 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011864 0.00000