HEADER VIRAL PROTEIN 07-FEB-13 4J4V TITLE PENTAMERIC SFTSVN WITH SURAMIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOCAPSID PROTEIN; COMPND 3 CHAIN: A, B, C, E, D; COMPND 4 SYNONYM: SFTSVN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PHLEBOVIRUS; SOURCE 3 ORGANISM_TAXID: 1205901; SOURCE 4 STRAIN: JS2010-018; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEOCAPSID PROTEIN, NUCLEOPROTEIN, NUCLEOCAPSID, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR L.JIAO,S.OUYANG,M.LIANG,F.NIU,N.SHAW,W.WU,W.DING,C.JIN,Y.ZHU,F.ZHANG, AUTHOR 2 T.WANG,C.LI,X.ZUO,C.H.LUAN,D.LI,Z.J.LIU REVDAT 4 08-NOV-23 4J4V 1 COMPND REMARK HETNAM REVDAT 3 25-MAR-20 4J4V 1 TITLE SEQADV REVDAT 2 10-JUL-13 4J4V 1 JRNL REVDAT 1 22-MAY-13 4J4V 0 JRNL AUTH L.JIAO,S.OUYANG,M.LIANG,F.NIU,N.SHAW,W.WU,W.DING,C.JIN, JRNL AUTH 2 Y.PENG,Y.ZHU,F.ZHANG,T.WANG,C.LI,X.ZUO,C.H.LUAN,D.LI,Z.J.LIU JRNL TITL STRUCTURE OF SEVERE FEVER WITH THROMBOCYTOPENIA SYNDROME JRNL TITL 2 VIRUS NUCLEOCAPSID PROTEIN IN COMPLEX WITH SURAMIN REVEALS JRNL TITL 3 THERAPEUTIC POTENTIAL JRNL REF J.VIROL. V. 87 6829 2013 JRNL REFN ISSN 0022-538X JRNL PMID 23576501 JRNL DOI 10.1128/JVI.00672-13 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.72 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 3 NUMBER OF REFLECTIONS : 60718 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.290 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.7244 - 5.5477 0.99 4404 149 0.2210 0.2803 REMARK 3 2 5.5477 - 4.4048 0.99 4345 148 0.1981 0.2525 REMARK 3 3 4.4048 - 3.8484 0.99 4338 148 0.1856 0.1781 REMARK 3 4 3.8484 - 3.4968 0.99 4366 148 0.2038 0.2389 REMARK 3 5 3.4968 - 3.2462 0.99 4291 147 0.2175 0.2585 REMARK 3 6 3.2462 - 3.0549 0.99 4328 146 0.2386 0.2671 REMARK 3 7 3.0549 - 2.9019 0.99 4284 147 0.2459 0.2665 REMARK 3 8 2.9019 - 2.7756 0.99 4299 146 0.2499 0.2814 REMARK 3 9 2.7756 - 2.6688 0.98 4285 147 0.2526 0.2962 REMARK 3 10 2.6688 - 2.5767 0.98 4224 143 0.2599 0.3322 REMARK 3 11 2.5767 - 2.4962 0.98 4300 146 0.2676 0.3343 REMARK 3 12 2.4962 - 2.4248 0.96 4148 141 0.2666 0.3036 REMARK 3 13 2.4248 - 2.3610 0.88 3795 129 0.2821 0.3203 REMARK 3 14 2.3610 - 2.3034 0.76 3313 113 0.2814 0.3310 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.820 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 9752 REMARK 3 ANGLE : 1.052 13251 REMARK 3 CHIRALITY : 0.065 1475 REMARK 3 PLANARITY : 0.004 1661 REMARK 3 DIHEDRAL : 15.223 3654 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 39.2503 10.2682 21.2621 REMARK 3 T TENSOR REMARK 3 T11: 0.2980 T22: 0.3032 REMARK 3 T33: 0.1484 T12: -0.0035 REMARK 3 T13: 0.0210 T23: 0.0000 REMARK 3 L TENSOR REMARK 3 L11: 0.3017 L22: 0.6041 REMARK 3 L33: -0.1151 L12: 0.0439 REMARK 3 L13: 0.1601 L23: -0.0264 REMARK 3 S TENSOR REMARK 3 S11: 0.0099 S12: 0.0175 S13: 0.0169 REMARK 3 S21: 0.0415 S22: -0.0463 S23: 0.0049 REMARK 3 S31: 0.0097 S32: 0.0524 S33: 0.0325 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4J4V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-FEB-13. REMARK 100 THE DEPOSITION ID IS D_1000077598. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAY-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60718 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 42.720 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: 4J4R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 51.57250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 77.44400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 51.57250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 77.44400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 53120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -206.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, E, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 465 LYS B 184 REMARK 465 MET B 185 REMARK 465 ARG B 186 REMARK 465 GLY B 187 REMARK 465 SER C -2 REMARK 465 ASN C -1 REMARK 465 ALA C 0 REMARK 465 SER E -2 REMARK 465 ASN E -1 REMARK 465 ALA E 0 REMARK 465 MET E 1 REMARK 465 VAL E 183 REMARK 465 LYS E 184 REMARK 465 MET E 185 REMARK 465 ARG E 186 REMARK 465 SER D -2 REMARK 465 ASN D -1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER C 189 OE1 GLU C 192 1.57 REMARK 500 OG SER C 189 CD GLU C 192 1.71 REMARK 500 OH TYR E 242 O HOH E 444 1.73 REMARK 500 OG SER C 189 OE2 GLU C 192 1.76 REMARK 500 O HOH D 420 O HOH D 435 1.84 REMARK 500 O HOH C 404 O HOH C 408 1.84 REMARK 500 OD2 ASP C 34 O HOH C 419 1.90 REMARK 500 OD1 ASN C 182 N LYS C 184 1.92 REMARK 500 O HOH E 406 O HOH E 429 1.92 REMARK 500 O HOH D 451 O HOH D 455 1.93 REMARK 500 O HOH A 418 O HOH A 428 1.94 REMARK 500 O HOH D 414 O HOH D 458 1.94 REMARK 500 O HOH A 408 O HOH A 425 1.95 REMARK 500 OE2 GLU C 236 O HOH C 416 1.97 REMARK 500 O HOH D 446 O HOH D 465 1.99 REMARK 500 NH2 ARG A 198 O HOH A 401 2.02 REMARK 500 OD1 ASP A 34 O HOH A 451 2.02 REMARK 500 O HOH D 436 O HOH D 460 2.03 REMARK 500 OH TYR C 242 O HOH C 402 2.03 REMARK 500 OD1 ASP C 48 O HOH C 412 2.03 REMARK 500 O VAL D 69 OG SER D 72 2.03 REMARK 500 ND1 HIS D 202 O HOH D 429 2.04 REMARK 500 O ALA B 241 O HOH B 435 2.04 REMARK 500 O80 SVR E 301 O HOH E 411 2.04 REMARK 500 O SER B 207 O HOH B 426 2.04 REMARK 500 O HOH C 417 O HOH C 421 2.05 REMARK 500 O ARG C 95 O HOH C 429 2.06 REMARK 500 O HOH E 443 O HOH E 447 2.06 REMARK 500 O80 SVR D 301 O HOH D 436 2.07 REMARK 500 O VAL D 9 O HOH D 427 2.07 REMARK 500 O VAL B 205 O HOH B 426 2.09 REMARK 500 NH1 ARG C 6 O HOH C 426 2.10 REMARK 500 OE1 GLU B 20 O HOH B 420 2.11 REMARK 500 OD2 ASP B 53 OH TYR B 90 2.11 REMARK 500 O HOH B 414 O HOH B 422 2.11 REMARK 500 NZ LYS D 179 O HOH D 441 2.12 REMARK 500 OE1 GLU C 88 O HOH C 421 2.12 REMARK 500 O HOH E 421 O HOH D 414 2.13 REMARK 500 O HOH D 459 O HOH D 463 2.13 REMARK 500 O HOH B 411 O HOH B 420 2.15 REMARK 500 O HOH E 426 O HOH E 430 2.16 REMARK 500 OD1 ASP B 23 NH2 ARG B 26 2.16 REMARK 500 OE2 GLU B 22 OH TYR C 125 2.16 REMARK 500 OD2 ASP D 34 O HOH D 426 2.17 REMARK 500 OG SER C 101 O HOH C 429 2.17 REMARK 500 O ALA C 176 OG1 THR C 180 2.18 REMARK 500 O HOH E 425 O HOH E 426 2.18 REMARK 500 OD1 ASP E 23 NH2 ARG E 26 2.19 REMARK 500 OD2 ASP E 34 O HOH E 426 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU D 138 O HOH C 416 2656 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 145 41.87 -83.92 REMARK 500 MET B 145 41.54 -83.58 REMARK 500 MET C 75 -161.45 -123.15 REMARK 500 MET C 145 49.02 -87.36 REMARK 500 MET D 145 44.20 -88.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 SVR A 301 REMARK 610 SVR B 301 REMARK 610 SVR C 301 REMARK 610 SVR E 301 REMARK 610 SVR D 301 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SVR A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SVR B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SVR C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SVR E 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SVR D 301 DBREF 4J4V A 1 245 UNP I6WJ72 I6WJ72_9VIRU 1 245 DBREF 4J4V B 1 245 UNP I6WJ72 I6WJ72_9VIRU 1 245 DBREF 4J4V C 1 245 UNP I6WJ72 I6WJ72_9VIRU 1 245 DBREF 4J4V E 1 245 UNP I6WJ72 I6WJ72_9VIRU 1 245 DBREF 4J4V D 1 245 UNP I6WJ72 I6WJ72_9VIRU 1 245 SEQADV 4J4V SER A -2 UNP I6WJ72 EXPRESSION TAG SEQADV 4J4V ASN A -1 UNP I6WJ72 EXPRESSION TAG SEQADV 4J4V ALA A 0 UNP I6WJ72 EXPRESSION TAG SEQADV 4J4V SER B -2 UNP I6WJ72 EXPRESSION TAG SEQADV 4J4V ASN B -1 UNP I6WJ72 EXPRESSION TAG SEQADV 4J4V ALA B 0 UNP I6WJ72 EXPRESSION TAG SEQADV 4J4V SER C -2 UNP I6WJ72 EXPRESSION TAG SEQADV 4J4V ASN C -1 UNP I6WJ72 EXPRESSION TAG SEQADV 4J4V ALA C 0 UNP I6WJ72 EXPRESSION TAG SEQADV 4J4V SER E -2 UNP I6WJ72 EXPRESSION TAG SEQADV 4J4V ASN E -1 UNP I6WJ72 EXPRESSION TAG SEQADV 4J4V ALA E 0 UNP I6WJ72 EXPRESSION TAG SEQADV 4J4V SER D -2 UNP I6WJ72 EXPRESSION TAG SEQADV 4J4V ASN D -1 UNP I6WJ72 EXPRESSION TAG SEQADV 4J4V ALA D 0 UNP I6WJ72 EXPRESSION TAG SEQRES 1 A 248 SER ASN ALA MET SER GLU TRP SER ARG ILE ALA VAL GLU SEQRES 2 A 248 PHE GLY GLU GLN GLN LEU ASN LEU THR GLU LEU GLU ASP SEQRES 3 A 248 PHE ALA ARG GLU LEU ALA TYR GLU GLY LEU ASP PRO ALA SEQRES 4 A 248 LEU ILE ILE LYS LYS LEU LYS GLU THR GLY GLY ASP ASP SEQRES 5 A 248 TRP VAL LYS ASP THR LYS PHE ILE ILE VAL PHE ALA LEU SEQRES 6 A 248 THR ARG GLY ASN LYS ILE VAL LYS ALA SER GLY LYS MET SEQRES 7 A 248 SER ASN SER GLY SER LYS ARG LEU MET ALA LEU GLN GLU SEQRES 8 A 248 LYS TYR GLY LEU VAL GLU ARG ALA GLU THR ARG LEU SER SEQRES 9 A 248 ILE THR PRO VAL ARG VAL ALA GLN SER LEU PRO THR TRP SEQRES 10 A 248 THR CYS ALA ALA ALA ALA ALA LEU LYS GLU TYR LEU PRO SEQRES 11 A 248 VAL GLY PRO ALA VAL MET ASN LEU LYS VAL GLU ASN TYR SEQRES 12 A 248 PRO PRO GLU MET MET CYS MET ALA PHE GLY SER LEU ILE SEQRES 13 A 248 PRO THR ALA GLY VAL SER GLU ALA THR THR LYS THR LEU SEQRES 14 A 248 MET GLU ALA TYR SER LEU TRP GLN ASP ALA PHE THR LYS SEQRES 15 A 248 THR ILE ASN VAL LYS MET ARG GLY ALA SER LYS THR GLU SEQRES 16 A 248 VAL TYR ASN SER PHE ARG ASP PRO LEU HIS ALA ALA VAL SEQRES 17 A 248 ASN SER VAL PHE PHE PRO ASN ASP VAL ARG VAL LYS TRP SEQRES 18 A 248 LEU LYS ALA LYS GLY ILE LEU GLY PRO ASP GLY VAL PRO SEQRES 19 A 248 SER ARG ALA ALA GLU VAL ALA ALA ALA ALA TYR ARG ASN SEQRES 20 A 248 LEU SEQRES 1 B 248 SER ASN ALA MET SER GLU TRP SER ARG ILE ALA VAL GLU SEQRES 2 B 248 PHE GLY GLU GLN GLN LEU ASN LEU THR GLU LEU GLU ASP SEQRES 3 B 248 PHE ALA ARG GLU LEU ALA TYR GLU GLY LEU ASP PRO ALA SEQRES 4 B 248 LEU ILE ILE LYS LYS LEU LYS GLU THR GLY GLY ASP ASP SEQRES 5 B 248 TRP VAL LYS ASP THR LYS PHE ILE ILE VAL PHE ALA LEU SEQRES 6 B 248 THR ARG GLY ASN LYS ILE VAL LYS ALA SER GLY LYS MET SEQRES 7 B 248 SER ASN SER GLY SER LYS ARG LEU MET ALA LEU GLN GLU SEQRES 8 B 248 LYS TYR GLY LEU VAL GLU ARG ALA GLU THR ARG LEU SER SEQRES 9 B 248 ILE THR PRO VAL ARG VAL ALA GLN SER LEU PRO THR TRP SEQRES 10 B 248 THR CYS ALA ALA ALA ALA ALA LEU LYS GLU TYR LEU PRO SEQRES 11 B 248 VAL GLY PRO ALA VAL MET ASN LEU LYS VAL GLU ASN TYR SEQRES 12 B 248 PRO PRO GLU MET MET CYS MET ALA PHE GLY SER LEU ILE SEQRES 13 B 248 PRO THR ALA GLY VAL SER GLU ALA THR THR LYS THR LEU SEQRES 14 B 248 MET GLU ALA TYR SER LEU TRP GLN ASP ALA PHE THR LYS SEQRES 15 B 248 THR ILE ASN VAL LYS MET ARG GLY ALA SER LYS THR GLU SEQRES 16 B 248 VAL TYR ASN SER PHE ARG ASP PRO LEU HIS ALA ALA VAL SEQRES 17 B 248 ASN SER VAL PHE PHE PRO ASN ASP VAL ARG VAL LYS TRP SEQRES 18 B 248 LEU LYS ALA LYS GLY ILE LEU GLY PRO ASP GLY VAL PRO SEQRES 19 B 248 SER ARG ALA ALA GLU VAL ALA ALA ALA ALA TYR ARG ASN SEQRES 20 B 248 LEU SEQRES 1 C 248 SER ASN ALA MET SER GLU TRP SER ARG ILE ALA VAL GLU SEQRES 2 C 248 PHE GLY GLU GLN GLN LEU ASN LEU THR GLU LEU GLU ASP SEQRES 3 C 248 PHE ALA ARG GLU LEU ALA TYR GLU GLY LEU ASP PRO ALA SEQRES 4 C 248 LEU ILE ILE LYS LYS LEU LYS GLU THR GLY GLY ASP ASP SEQRES 5 C 248 TRP VAL LYS ASP THR LYS PHE ILE ILE VAL PHE ALA LEU SEQRES 6 C 248 THR ARG GLY ASN LYS ILE VAL LYS ALA SER GLY LYS MET SEQRES 7 C 248 SER ASN SER GLY SER LYS ARG LEU MET ALA LEU GLN GLU SEQRES 8 C 248 LYS TYR GLY LEU VAL GLU ARG ALA GLU THR ARG LEU SER SEQRES 9 C 248 ILE THR PRO VAL ARG VAL ALA GLN SER LEU PRO THR TRP SEQRES 10 C 248 THR CYS ALA ALA ALA ALA ALA LEU LYS GLU TYR LEU PRO SEQRES 11 C 248 VAL GLY PRO ALA VAL MET ASN LEU LYS VAL GLU ASN TYR SEQRES 12 C 248 PRO PRO GLU MET MET CYS MET ALA PHE GLY SER LEU ILE SEQRES 13 C 248 PRO THR ALA GLY VAL SER GLU ALA THR THR LYS THR LEU SEQRES 14 C 248 MET GLU ALA TYR SER LEU TRP GLN ASP ALA PHE THR LYS SEQRES 15 C 248 THR ILE ASN VAL LYS MET ARG GLY ALA SER LYS THR GLU SEQRES 16 C 248 VAL TYR ASN SER PHE ARG ASP PRO LEU HIS ALA ALA VAL SEQRES 17 C 248 ASN SER VAL PHE PHE PRO ASN ASP VAL ARG VAL LYS TRP SEQRES 18 C 248 LEU LYS ALA LYS GLY ILE LEU GLY PRO ASP GLY VAL PRO SEQRES 19 C 248 SER ARG ALA ALA GLU VAL ALA ALA ALA ALA TYR ARG ASN SEQRES 20 C 248 LEU SEQRES 1 E 248 SER ASN ALA MET SER GLU TRP SER ARG ILE ALA VAL GLU SEQRES 2 E 248 PHE GLY GLU GLN GLN LEU ASN LEU THR GLU LEU GLU ASP SEQRES 3 E 248 PHE ALA ARG GLU LEU ALA TYR GLU GLY LEU ASP PRO ALA SEQRES 4 E 248 LEU ILE ILE LYS LYS LEU LYS GLU THR GLY GLY ASP ASP SEQRES 5 E 248 TRP VAL LYS ASP THR LYS PHE ILE ILE VAL PHE ALA LEU SEQRES 6 E 248 THR ARG GLY ASN LYS ILE VAL LYS ALA SER GLY LYS MET SEQRES 7 E 248 SER ASN SER GLY SER LYS ARG LEU MET ALA LEU GLN GLU SEQRES 8 E 248 LYS TYR GLY LEU VAL GLU ARG ALA GLU THR ARG LEU SER SEQRES 9 E 248 ILE THR PRO VAL ARG VAL ALA GLN SER LEU PRO THR TRP SEQRES 10 E 248 THR CYS ALA ALA ALA ALA ALA LEU LYS GLU TYR LEU PRO SEQRES 11 E 248 VAL GLY PRO ALA VAL MET ASN LEU LYS VAL GLU ASN TYR SEQRES 12 E 248 PRO PRO GLU MET MET CYS MET ALA PHE GLY SER LEU ILE SEQRES 13 E 248 PRO THR ALA GLY VAL SER GLU ALA THR THR LYS THR LEU SEQRES 14 E 248 MET GLU ALA TYR SER LEU TRP GLN ASP ALA PHE THR LYS SEQRES 15 E 248 THR ILE ASN VAL LYS MET ARG GLY ALA SER LYS THR GLU SEQRES 16 E 248 VAL TYR ASN SER PHE ARG ASP PRO LEU HIS ALA ALA VAL SEQRES 17 E 248 ASN SER VAL PHE PHE PRO ASN ASP VAL ARG VAL LYS TRP SEQRES 18 E 248 LEU LYS ALA LYS GLY ILE LEU GLY PRO ASP GLY VAL PRO SEQRES 19 E 248 SER ARG ALA ALA GLU VAL ALA ALA ALA ALA TYR ARG ASN SEQRES 20 E 248 LEU SEQRES 1 D 248 SER ASN ALA MET SER GLU TRP SER ARG ILE ALA VAL GLU SEQRES 2 D 248 PHE GLY GLU GLN GLN LEU ASN LEU THR GLU LEU GLU ASP SEQRES 3 D 248 PHE ALA ARG GLU LEU ALA TYR GLU GLY LEU ASP PRO ALA SEQRES 4 D 248 LEU ILE ILE LYS LYS LEU LYS GLU THR GLY GLY ASP ASP SEQRES 5 D 248 TRP VAL LYS ASP THR LYS PHE ILE ILE VAL PHE ALA LEU SEQRES 6 D 248 THR ARG GLY ASN LYS ILE VAL LYS ALA SER GLY LYS MET SEQRES 7 D 248 SER ASN SER GLY SER LYS ARG LEU MET ALA LEU GLN GLU SEQRES 8 D 248 LYS TYR GLY LEU VAL GLU ARG ALA GLU THR ARG LEU SER SEQRES 9 D 248 ILE THR PRO VAL ARG VAL ALA GLN SER LEU PRO THR TRP SEQRES 10 D 248 THR CYS ALA ALA ALA ALA ALA LEU LYS GLU TYR LEU PRO SEQRES 11 D 248 VAL GLY PRO ALA VAL MET ASN LEU LYS VAL GLU ASN TYR SEQRES 12 D 248 PRO PRO GLU MET MET CYS MET ALA PHE GLY SER LEU ILE SEQRES 13 D 248 PRO THR ALA GLY VAL SER GLU ALA THR THR LYS THR LEU SEQRES 14 D 248 MET GLU ALA TYR SER LEU TRP GLN ASP ALA PHE THR LYS SEQRES 15 D 248 THR ILE ASN VAL LYS MET ARG GLY ALA SER LYS THR GLU SEQRES 16 D 248 VAL TYR ASN SER PHE ARG ASP PRO LEU HIS ALA ALA VAL SEQRES 17 D 248 ASN SER VAL PHE PHE PRO ASN ASP VAL ARG VAL LYS TRP SEQRES 18 D 248 LEU LYS ALA LYS GLY ILE LEU GLY PRO ASP GLY VAL PRO SEQRES 19 D 248 SER ARG ALA ALA GLU VAL ALA ALA ALA ALA TYR ARG ASN SEQRES 20 D 248 LEU HET SVR A 301 33 HET SVR B 301 33 HET SVR C 301 33 HET SVR E 301 33 HET SVR D 301 33 HETNAM SVR 8,8'-[CARBONYLBIS[IMINO-3,1-PHENYLENECARBONYLIMINO(4- HETNAM 2 SVR METHYL-3,1-PHENYLENE)CARBONYLIMINO]]BIS-1,3,5- HETNAM 3 SVR NAPHTHALENETRISULFON IC ACID HETSYN SVR SURAMIN FORMUL 6 SVR 5(C51 H40 N6 O23 S6) FORMUL 11 HOH *250(H2 O) HELIX 1 1 SER A 2 GLU A 13 1 12 HELIX 2 2 ASN A 17 ALA A 29 1 13 HELIX 3 3 ASP A 34 GLY A 47 1 14 HELIX 4 4 ASP A 49 GLY A 65 1 17 HELIX 5 5 LYS A 67 GLY A 73 1 7 HELIX 6 6 SER A 76 GLY A 91 1 16 HELIX 7 7 THR A 103 LEU A 111 1 9 HELIX 8 8 LEU A 111 LEU A 122 1 12 HELIX 9 9 LYS A 123 LEU A 126 5 4 HELIX 10 10 GLY A 129 VAL A 137 1 9 HELIX 11 11 PRO A 141 MET A 145 5 5 HELIX 12 12 ALA A 148 ILE A 153 5 6 HELIX 13 13 SER A 159 ASN A 182 1 24 HELIX 14 14 VAL A 183 ALA A 188 5 6 HELIX 15 15 SER A 189 SER A 207 1 19 HELIX 16 16 PRO A 211 LYS A 222 1 12 HELIX 17 17 SER A 232 ASN A 244 1 13 HELIX 18 18 GLU B 3 GLU B 13 1 11 HELIX 19 19 ASN B 17 ALA B 29 1 13 HELIX 20 20 ASP B 34 GLY B 47 1 14 HELIX 21 21 ASP B 49 GLY B 65 1 17 HELIX 22 22 LYS B 67 GLY B 73 1 7 HELIX 23 23 SER B 76 GLY B 91 1 16 HELIX 24 24 THR B 103 LEU B 111 1 9 HELIX 25 25 LEU B 111 LEU B 122 1 12 HELIX 26 26 LYS B 123 LEU B 126 5 4 HELIX 27 27 GLY B 129 ASN B 134 1 6 HELIX 28 28 PRO B 141 MET B 145 5 5 HELIX 29 29 ALA B 148 ILE B 153 5 6 HELIX 30 30 SER B 159 ASN B 182 1 24 HELIX 31 31 SER B 189 SER B 207 1 19 HELIX 32 32 PRO B 211 LYS B 222 1 12 HELIX 33 33 SER B 232 LEU B 245 1 14 HELIX 34 34 SER C 2 GLY C 12 1 11 HELIX 35 35 ASN C 17 ALA C 29 1 13 HELIX 36 36 ASP C 34 GLY C 47 1 14 HELIX 37 37 ASP C 49 GLY C 65 1 17 HELIX 38 38 LYS C 67 GLY C 73 1 7 HELIX 39 39 SER C 76 GLY C 91 1 16 HELIX 40 40 THR C 103 LEU C 111 1 9 HELIX 41 41 LEU C 111 LEU C 122 1 12 HELIX 42 42 LYS C 123 LEU C 126 5 4 HELIX 43 43 GLY C 129 ASN C 134 1 6 HELIX 44 44 PRO C 141 MET C 145 5 5 HELIX 45 45 ALA C 148 ILE C 153 5 6 HELIX 46 46 SER C 159 ASN C 182 1 24 HELIX 47 47 SER C 189 SER C 207 1 19 HELIX 48 48 PRO C 211 LYS C 222 1 12 HELIX 49 49 SER C 232 ASN C 244 1 13 HELIX 50 50 GLU E 3 GLY E 12 1 10 HELIX 51 51 ASN E 17 ALA E 29 1 13 HELIX 52 52 ASP E 34 GLY E 47 1 14 HELIX 53 53 ASP E 49 GLY E 65 1 17 HELIX 54 54 LYS E 67 GLY E 73 1 7 HELIX 55 55 SER E 76 GLY E 91 1 16 HELIX 56 56 THR E 103 LEU E 111 1 9 HELIX 57 57 LEU E 111 LEU E 122 1 12 HELIX 58 58 LYS E 123 LEU E 126 5 4 HELIX 59 59 GLY E 129 VAL E 137 1 9 HELIX 60 60 PRO E 141 MET E 145 5 5 HELIX 61 61 ALA E 148 ILE E 153 5 6 HELIX 62 62 SER E 159 ASN E 182 1 24 HELIX 63 63 SER E 189 SER E 207 1 19 HELIX 64 64 PRO E 211 LYS E 222 1 12 HELIX 65 65 SER E 232 ASN E 244 1 13 HELIX 66 66 SER D 2 GLU D 13 1 12 HELIX 67 67 ASN D 17 ALA D 29 1 13 HELIX 68 68 ASP D 34 GLY D 47 1 14 HELIX 69 69 ASP D 49 GLY D 65 1 17 HELIX 70 70 LYS D 67 GLY D 73 1 7 HELIX 71 71 SER D 76 GLY D 91 1 16 HELIX 72 72 THR D 103 LEU D 111 1 9 HELIX 73 73 LEU D 111 LEU D 122 1 12 HELIX 74 74 LYS D 123 LEU D 126 5 4 HELIX 75 75 GLY D 129 VAL D 137 1 9 HELIX 76 76 PRO D 141 MET D 145 5 5 HELIX 77 77 ALA D 148 ILE D 153 5 6 HELIX 78 78 SER D 159 ASN D 182 1 24 HELIX 79 79 VAL D 183 ARG D 186 5 4 HELIX 80 80 SER D 189 SER D 196 1 8 HELIX 81 81 PHE D 197 SER D 207 1 11 HELIX 82 82 PRO D 211 LYS D 222 1 12 HELIX 83 83 SER D 232 ASN D 244 1 13 SITE 1 AC1 11 THR A 63 ARG A 64 GLY A 65 ASN A 66 SITE 2 AC1 11 LYS A 67 GLU A 94 ARG A 95 ALA A 96 SITE 3 AC1 11 PRO A 127 MET A 147 PHE A 177 SITE 1 AC2 11 THR B 63 ARG B 64 GLY B 65 ASN B 66 SITE 2 AC2 11 LYS B 67 GLU B 94 ARG B 95 ALA B 96 SITE 3 AC2 11 PRO B 127 MET B 147 PHE B 177 SITE 1 AC3 11 THR C 63 ARG C 64 GLY C 65 ASN C 66 SITE 2 AC3 11 LYS C 67 GLU C 94 ARG C 95 ALA C 96 SITE 3 AC3 11 PRO C 127 MET C 147 PHE C 177 SITE 1 AC4 10 THR E 63 ARG E 64 GLY E 65 ASN E 66 SITE 2 AC4 10 ARG E 95 ALA E 96 PRO E 127 MET E 147 SITE 3 AC4 10 PHE E 177 HOH E 411 SITE 1 AC5 11 THR D 63 ARG D 64 GLY D 65 ASN D 66 SITE 2 AC5 11 ARG D 95 ALA D 96 VAL D 105 PRO D 127 SITE 3 AC5 11 MET D 147 PHE D 177 HOH D 436 CRYST1 103.145 154.888 93.291 90.00 102.12 90.00 C 1 2 1 20 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009695 0.000000 0.002083 0.00000 SCALE2 0.000000 0.006456 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010964 0.00000