data_4J8Q # _entry.id 4J8Q # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4J8Q pdb_00004j8q 10.2210/pdb4j8q/pdb RCSB RCSB077737 ? ? WWPDB D_1000077737 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id JCSG-393152 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 4J8Q _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-02-14 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a hypothetical protein (BF0700) from Bacteroides fragilis NCTC 9343 at 2.50 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 4J8Q _cell.length_a 79.556 _cell.length_b 124.425 _cell.length_c 56.072 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4J8Q _symmetry.Int_Tables_number 20 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative uncharacterized protein' 25692.938 1 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 3 water nat water 18.015 52 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GCDDNDGYSLGDIAVDWATVRVVGGDTYSLNADRWGTLWPAATAIPFYKPIDGQRVITYFNPLYDNYEGYDHAVKVEHNY NVLTKQVEDLTAENESEFGNDPVWVNKD(MSE)(MSE)WIGGGYLNVIFRQNLPVKEKHLVSLVRD(MSE)RATAAEGED DGYIHLELRYKTYDDVTARQANGAVSFNLNSLDLTGKKGIKVKLNSVKDGETEVVFNLKGQS(MSE)PEEAKQVTLSDEV QIK ; _entity_poly.pdbx_seq_one_letter_code_can ;GCDDNDGYSLGDIAVDWATVRVVGGDTYSLNADRWGTLWPAATAIPFYKPIDGQRVITYFNPLYDNYEGYDHAVKVEHNY NVLTKQVEDLTAENESEFGNDPVWVNKDMMWIGGGYLNVIFRQNLPVKEKHLVSLVRDMRATAAEGEDDGYIHLELRYKT YDDVTARQANGAVSFNLNSLDLTGKKGIKVKLNSVKDGETEVVFNLKGQSMPEEAKQVTLSDEVQIK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier JCSG-393152 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 CYS n 1 3 ASP n 1 4 ASP n 1 5 ASN n 1 6 ASP n 1 7 GLY n 1 8 TYR n 1 9 SER n 1 10 LEU n 1 11 GLY n 1 12 ASP n 1 13 ILE n 1 14 ALA n 1 15 VAL n 1 16 ASP n 1 17 TRP n 1 18 ALA n 1 19 THR n 1 20 VAL n 1 21 ARG n 1 22 VAL n 1 23 VAL n 1 24 GLY n 1 25 GLY n 1 26 ASP n 1 27 THR n 1 28 TYR n 1 29 SER n 1 30 LEU n 1 31 ASN n 1 32 ALA n 1 33 ASP n 1 34 ARG n 1 35 TRP n 1 36 GLY n 1 37 THR n 1 38 LEU n 1 39 TRP n 1 40 PRO n 1 41 ALA n 1 42 ALA n 1 43 THR n 1 44 ALA n 1 45 ILE n 1 46 PRO n 1 47 PHE n 1 48 TYR n 1 49 LYS n 1 50 PRO n 1 51 ILE n 1 52 ASP n 1 53 GLY n 1 54 GLN n 1 55 ARG n 1 56 VAL n 1 57 ILE n 1 58 THR n 1 59 TYR n 1 60 PHE n 1 61 ASN n 1 62 PRO n 1 63 LEU n 1 64 TYR n 1 65 ASP n 1 66 ASN n 1 67 TYR n 1 68 GLU n 1 69 GLY n 1 70 TYR n 1 71 ASP n 1 72 HIS n 1 73 ALA n 1 74 VAL n 1 75 LYS n 1 76 VAL n 1 77 GLU n 1 78 HIS n 1 79 ASN n 1 80 TYR n 1 81 ASN n 1 82 VAL n 1 83 LEU n 1 84 THR n 1 85 LYS n 1 86 GLN n 1 87 VAL n 1 88 GLU n 1 89 ASP n 1 90 LEU n 1 91 THR n 1 92 ALA n 1 93 GLU n 1 94 ASN n 1 95 GLU n 1 96 SER n 1 97 GLU n 1 98 PHE n 1 99 GLY n 1 100 ASN n 1 101 ASP n 1 102 PRO n 1 103 VAL n 1 104 TRP n 1 105 VAL n 1 106 ASN n 1 107 LYS n 1 108 ASP n 1 109 MSE n 1 110 MSE n 1 111 TRP n 1 112 ILE n 1 113 GLY n 1 114 GLY n 1 115 GLY n 1 116 TYR n 1 117 LEU n 1 118 ASN n 1 119 VAL n 1 120 ILE n 1 121 PHE n 1 122 ARG n 1 123 GLN n 1 124 ASN n 1 125 LEU n 1 126 PRO n 1 127 VAL n 1 128 LYS n 1 129 GLU n 1 130 LYS n 1 131 HIS n 1 132 LEU n 1 133 VAL n 1 134 SER n 1 135 LEU n 1 136 VAL n 1 137 ARG n 1 138 ASP n 1 139 MSE n 1 140 ARG n 1 141 ALA n 1 142 THR n 1 143 ALA n 1 144 ALA n 1 145 GLU n 1 146 GLY n 1 147 GLU n 1 148 ASP n 1 149 ASP n 1 150 GLY n 1 151 TYR n 1 152 ILE n 1 153 HIS n 1 154 LEU n 1 155 GLU n 1 156 LEU n 1 157 ARG n 1 158 TYR n 1 159 LYS n 1 160 THR n 1 161 TYR n 1 162 ASP n 1 163 ASP n 1 164 VAL n 1 165 THR n 1 166 ALA n 1 167 ARG n 1 168 GLN n 1 169 ALA n 1 170 ASN n 1 171 GLY n 1 172 ALA n 1 173 VAL n 1 174 SER n 1 175 PHE n 1 176 ASN n 1 177 LEU n 1 178 ASN n 1 179 SER n 1 180 LEU n 1 181 ASP n 1 182 LEU n 1 183 THR n 1 184 GLY n 1 185 LYS n 1 186 LYS n 1 187 GLY n 1 188 ILE n 1 189 LYS n 1 190 VAL n 1 191 LYS n 1 192 LEU n 1 193 ASN n 1 194 SER n 1 195 VAL n 1 196 LYS n 1 197 ASP n 1 198 GLY n 1 199 GLU n 1 200 THR n 1 201 GLU n 1 202 VAL n 1 203 VAL n 1 204 PHE n 1 205 ASN n 1 206 LEU n 1 207 LYS n 1 208 GLY n 1 209 GLN n 1 210 SER n 1 211 MSE n 1 212 PRO n 1 213 GLU n 1 214 GLU n 1 215 ALA n 1 216 LYS n 1 217 GLN n 1 218 VAL n 1 219 THR n 1 220 LEU n 1 221 SER n 1 222 ASP n 1 223 GLU n 1 224 VAL n 1 225 GLN n 1 226 ILE n 1 227 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BF0700, BF9343_0666' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 25285 / NCTC 9343' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacteroides fragilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 272559 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain PB1 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5LHD5_BACFN _struct_ref.pdbx_db_accession Q5LHD5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;CDDNDGYSLGDIAVDWATVRVVGGDTYSLNADRWGTLWPAATAIPFYKPIDGQRVITYFNPLYDNYEGYDHAVKVEHNYN VLTKQVEDLTAENESEFGNDPVWVNKDMMWIGGGYLNVIFRQNLPVKEKHLVSLVRDMRATAAEGEDDGYIHLELRYKTY DDVTARQANGAVSFNLNSLDLTGKKGIKVKLNSVKDGETEVVFNLKGQSMPEEAKQVTLSDEVQIK ; _struct_ref.pdbx_align_begin 22 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4J8Q _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 227 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q5LHD5 _struct_ref_seq.db_align_beg 22 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 247 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 22 _struct_ref_seq.pdbx_auth_seq_align_end 247 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4J8Q _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q5LHD5 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 4J8Q # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.70 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 54.45 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.2M ammonium nitrate, 20% polyethylene glycol 3350, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.details 'Flat mirror (vertical focusing); single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_detector.pdbx_collection_date 2013-01-24 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'single crystal Si(111) bent' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97944 1.0 3 0.97853 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.91837,0.97944,0.97853 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 4J8Q _reflns.d_resolution_high 2.50 _reflns.d_resolution_low 28.767 _reflns.number_obs 9419 _reflns.pdbx_Rmerge_I_obs 0.100 _reflns.pdbx_netI_over_sigmaI 7.600 _reflns.percent_possible_obs 90.200 _reflns.B_iso_Wilson_estimate 50.170 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.500 2.590 3138 ? 1698 0.600 1.5 ? ? ? ? ? 92.000 1 1 2.590 2.690 3223 ? 1678 0.481 1.9 ? ? ? ? ? 92.700 2 1 2.690 2.810 3243 ? 1698 0.374 2.4 ? ? ? ? ? 93.100 3 1 2.810 2.960 3356 ? 1717 0.277 3.1 ? ? ? ? ? 90.800 4 1 2.960 3.150 3226 ? 1690 0.179 4.7 ? ? ? ? ? 90.300 5 1 3.150 3.390 2986 ? 1644 0.104 7.1 ? ? ? ? ? 89.700 6 1 3.390 3.730 3439 ? 1727 0.082 10.1 ? ? ? ? ? 91.700 7 1 3.730 4.260 3226 ? 1592 0.061 13.1 ? ? ? ? ? 87.700 8 1 4.260 5.350 3102 ? 1611 0.047 16.1 ? ? ? ? ? 86.700 9 1 5.350 ? 3340 ? 1665 0.046 17.0 ? ? ? ? ? 87.600 10 1 # _refine.entry_id 4J8Q _refine.ls_d_res_high 2.5000 _refine.ls_d_res_low 28.767 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 94.7300 _refine.ls_number_reflns_obs 9409 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. 3. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. 5. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 6. 1,2-ETHANEDIOL (EDO) FROM THE CRYOPROTECTION SOLUTION IS MODELED. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1986 _refine.ls_R_factor_R_work 0.1962 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2505 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.8000 _refine.ls_number_reflns_R_free 452 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 44.2726 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 2.5100 _refine.aniso_B[2][2] -1.6000 _refine.aniso_B[3][3] -0.9100 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9380 _refine.correlation_coeff_Fo_to_Fc_free 0.9110 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.4030 _refine.pdbx_overall_ESU_R_Free 0.2750 _refine.overall_SU_ML 0.1890 _refine.overall_SU_B 17.3760 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 131.770 _refine.B_iso_min 17.920 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.400 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1541 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 52 _refine_hist.number_atoms_total 1597 _refine_hist.d_res_high 2.5000 _refine_hist.d_res_low 28.767 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1584 0.008 0.019 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1465 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2151 1.156 1.941 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 3354 0.687 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 193 6.602 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 81 30.509 24.938 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 244 16.255 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 7 12.637 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 233 0.068 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1824 0.004 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 379 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 775 3.573 5.393 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 774 3.551 5.386 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 964 5.868 10.012 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.5040 _refine_ls_shell.d_res_low 2.5680 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 94.6400 _refine_ls_shell.number_reflns_R_work 647 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.3270 _refine_ls_shell.R_factor_R_free 0.4290 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 41 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 688 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.title 'Crystal structure of a NigD-like protein (BF0700) from Bacteroides fragilis NCTC 9343 at 2.50 A resolution' _struct.entry_id 4J8Q _struct.pdbx_model_type_details ? _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.text ;NigD-like protein, PF12667 family, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, UNKNOWN FUNCTION ; _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.entry_id 4J8Q # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASP 108 C ? ? ? 1_555 A MSE 109 N ? ? A ASP 128 A MSE 129 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale2 covale both ? A MSE 109 C ? ? ? 1_555 A MSE 110 N ? ? A MSE 129 A MSE 130 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale3 covale both ? A MSE 110 C ? ? ? 1_555 A TRP 111 N ? ? A MSE 130 A TRP 131 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale4 covale both ? A ASP 138 C ? ? ? 1_555 A MSE 139 N ? ? A ASP 158 A MSE 159 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale5 covale both ? A MSE 139 C ? ? ? 1_555 A ARG 140 N ? ? A MSE 159 A ARG 160 1_555 ? ? ? ? ? ? ? 1.326 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 9 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 108 ? GLY A 113 ? ASP A 128 GLY A 133 A 2 TYR A 116 ? PHE A 121 ? TYR A 136 PHE A 141 A 3 GLY A 171 ? ASN A 176 ? GLY A 191 ASN A 196 A 4 TYR A 70 ? GLN A 86 ? TYR A 90 GLN A 106 A 5 ARG A 55 ? TYR A 67 ? ARG A 75 TYR A 87 A 6 ALA A 14 ? GLY A 24 ? ALA A 34 GLY A 44 A 7 THR A 27 ? ALA A 32 ? THR A 47 ALA A 52 A 8 GLY A 36 ? THR A 43 ? GLY A 56 THR A 63 A 9 TYR A 70 ? GLN A 86 ? TYR A 90 GLN A 106 B 1 GLU A 88 ? LEU A 90 ? GLU A 108 LEU A 110 B 2 HIS A 131 ? ASP A 138 ? HIS A 151 ASP A 158 B 3 TYR A 151 ? THR A 160 ? TYR A 171 THR A 180 B 4 GLY A 187 ? SER A 194 ? GLY A 207 SER A 214 B 5 GLY A 198 ? ASN A 205 ? GLY A 218 ASN A 225 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TRP A 111 ? N TRP A 131 O ASN A 118 ? O ASN A 138 A 2 3 N VAL A 119 ? N VAL A 139 O VAL A 173 ? O VAL A 193 A 3 4 O SER A 174 ? O SER A 194 N LEU A 83 ? N LEU A 103 A 4 5 O GLU A 77 ? O GLU A 97 N TYR A 59 ? N TYR A 79 A 5 6 O VAL A 56 ? O VAL A 76 N ALA A 18 ? N ALA A 38 A 6 7 N THR A 19 ? N THR A 39 O ASN A 31 ? O ASN A 51 A 7 8 N LEU A 30 ? N LEU A 50 O LEU A 38 ? O LEU A 58 A 8 9 N TRP A 39 ? N TRP A 59 O HIS A 72 ? O HIS A 92 B 1 2 N LEU A 90 ? N LEU A 110 O ARG A 137 ? O ARG A 157 B 2 3 N VAL A 136 ? N VAL A 156 O GLU A 155 ? O GLU A 175 B 3 4 N ILE A 152 ? N ILE A 172 O LYS A 189 ? O LYS A 209 B 4 5 N LEU A 192 ? N LEU A 212 O THR A 200 ? O THR A 220 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id EDO _struct_site.pdbx_auth_seq_id 300 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 5 _struct_site.details 'BINDING SITE FOR RESIDUE EDO A 300' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 LEU A 83 ? LEU A 103 . ? 1_555 ? 2 AC1 5 LYS A 85 ? LYS A 105 . ? 1_555 ? 3 AC1 5 HIS A 131 ? HIS A 151 . ? 1_555 ? 4 AC1 5 LEU A 132 ? LEU A 152 . ? 1_555 ? 5 AC1 5 VAL A 133 ? VAL A 153 . ? 1_555 ? # _atom_sites.entry_id 4J8Q _atom_sites.fract_transf_matrix[1][1] 0.012570 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008037 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017834 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 CYS 2 22 ? ? ? A . n A 1 3 ASP 3 23 ? ? ? A . n A 1 4 ASP 4 24 ? ? ? A . n A 1 5 ASN 5 25 ? ? ? A . n A 1 6 ASP 6 26 26 ASP ASP A . n A 1 7 GLY 7 27 27 GLY GLY A . n A 1 8 TYR 8 28 28 TYR TYR A . n A 1 9 SER 9 29 29 SER SER A . n A 1 10 LEU 10 30 30 LEU LEU A . n A 1 11 GLY 11 31 31 GLY GLY A . n A 1 12 ASP 12 32 32 ASP ASP A . n A 1 13 ILE 13 33 33 ILE ILE A . n A 1 14 ALA 14 34 34 ALA ALA A . n A 1 15 VAL 15 35 35 VAL VAL A . n A 1 16 ASP 16 36 36 ASP ASP A . n A 1 17 TRP 17 37 37 TRP TRP A . n A 1 18 ALA 18 38 38 ALA ALA A . n A 1 19 THR 19 39 39 THR THR A . n A 1 20 VAL 20 40 40 VAL VAL A . n A 1 21 ARG 21 41 41 ARG ARG A . n A 1 22 VAL 22 42 42 VAL VAL A . n A 1 23 VAL 23 43 43 VAL VAL A . n A 1 24 GLY 24 44 44 GLY GLY A . n A 1 25 GLY 25 45 45 GLY GLY A . n A 1 26 ASP 26 46 46 ASP ASP A . n A 1 27 THR 27 47 47 THR THR A . n A 1 28 TYR 28 48 48 TYR TYR A . n A 1 29 SER 29 49 49 SER SER A . n A 1 30 LEU 30 50 50 LEU LEU A . n A 1 31 ASN 31 51 51 ASN ASN A . n A 1 32 ALA 32 52 52 ALA ALA A . n A 1 33 ASP 33 53 53 ASP ASP A . n A 1 34 ARG 34 54 54 ARG ARG A . n A 1 35 TRP 35 55 55 TRP TRP A . n A 1 36 GLY 36 56 56 GLY GLY A . n A 1 37 THR 37 57 57 THR THR A . n A 1 38 LEU 38 58 58 LEU LEU A . n A 1 39 TRP 39 59 59 TRP TRP A . n A 1 40 PRO 40 60 60 PRO PRO A . n A 1 41 ALA 41 61 61 ALA ALA A . n A 1 42 ALA 42 62 62 ALA ALA A . n A 1 43 THR 43 63 63 THR THR A . n A 1 44 ALA 44 64 64 ALA ALA A . n A 1 45 ILE 45 65 65 ILE ILE A . n A 1 46 PRO 46 66 66 PRO PRO A . n A 1 47 PHE 47 67 67 PHE PHE A . n A 1 48 TYR 48 68 68 TYR TYR A . n A 1 49 LYS 49 69 69 LYS LYS A . n A 1 50 PRO 50 70 70 PRO PRO A . n A 1 51 ILE 51 71 71 ILE ILE A . n A 1 52 ASP 52 72 72 ASP ASP A . n A 1 53 GLY 53 73 73 GLY GLY A . n A 1 54 GLN 54 74 74 GLN GLN A . n A 1 55 ARG 55 75 75 ARG ARG A . n A 1 56 VAL 56 76 76 VAL VAL A . n A 1 57 ILE 57 77 77 ILE ILE A . n A 1 58 THR 58 78 78 THR THR A . n A 1 59 TYR 59 79 79 TYR TYR A . n A 1 60 PHE 60 80 80 PHE PHE A . n A 1 61 ASN 61 81 81 ASN ASN A . n A 1 62 PRO 62 82 82 PRO PRO A . n A 1 63 LEU 63 83 83 LEU LEU A . n A 1 64 TYR 64 84 84 TYR TYR A . n A 1 65 ASP 65 85 85 ASP ASP A . n A 1 66 ASN 66 86 86 ASN ASN A . n A 1 67 TYR 67 87 87 TYR TYR A . n A 1 68 GLU 68 88 88 GLU GLU A . n A 1 69 GLY 69 89 89 GLY GLY A . n A 1 70 TYR 70 90 90 TYR TYR A . n A 1 71 ASP 71 91 91 ASP ASP A . n A 1 72 HIS 72 92 92 HIS HIS A . n A 1 73 ALA 73 93 93 ALA ALA A . n A 1 74 VAL 74 94 94 VAL VAL A . n A 1 75 LYS 75 95 95 LYS LYS A . n A 1 76 VAL 76 96 96 VAL VAL A . n A 1 77 GLU 77 97 97 GLU GLU A . n A 1 78 HIS 78 98 98 HIS HIS A . n A 1 79 ASN 79 99 99 ASN ASN A . n A 1 80 TYR 80 100 100 TYR TYR A . n A 1 81 ASN 81 101 101 ASN ASN A . n A 1 82 VAL 82 102 102 VAL VAL A . n A 1 83 LEU 83 103 103 LEU LEU A . n A 1 84 THR 84 104 104 THR THR A . n A 1 85 LYS 85 105 105 LYS LYS A . n A 1 86 GLN 86 106 106 GLN GLN A . n A 1 87 VAL 87 107 107 VAL VAL A . n A 1 88 GLU 88 108 108 GLU GLU A . n A 1 89 ASP 89 109 109 ASP ASP A . n A 1 90 LEU 90 110 110 LEU LEU A . n A 1 91 THR 91 111 111 THR THR A . n A 1 92 ALA 92 112 112 ALA ALA A . n A 1 93 GLU 93 113 113 GLU GLU A . n A 1 94 ASN 94 114 114 ASN ASN A . n A 1 95 GLU 95 115 115 GLU GLU A . n A 1 96 SER 96 116 116 SER SER A . n A 1 97 GLU 97 117 117 GLU GLU A . n A 1 98 PHE 98 118 118 PHE PHE A . n A 1 99 GLY 99 119 119 GLY GLY A . n A 1 100 ASN 100 120 120 ASN ASN A . n A 1 101 ASP 101 121 121 ASP ASP A . n A 1 102 PRO 102 122 122 PRO PRO A . n A 1 103 VAL 103 123 123 VAL VAL A . n A 1 104 TRP 104 124 124 TRP TRP A . n A 1 105 VAL 105 125 125 VAL VAL A . n A 1 106 ASN 106 126 126 ASN ASN A . n A 1 107 LYS 107 127 127 LYS LYS A . n A 1 108 ASP 108 128 128 ASP ASP A . n A 1 109 MSE 109 129 129 MSE MSE A . n A 1 110 MSE 110 130 130 MSE MSE A . n A 1 111 TRP 111 131 131 TRP TRP A . n A 1 112 ILE 112 132 132 ILE ILE A . n A 1 113 GLY 113 133 133 GLY GLY A . n A 1 114 GLY 114 134 134 GLY GLY A . n A 1 115 GLY 115 135 135 GLY GLY A . n A 1 116 TYR 116 136 136 TYR TYR A . n A 1 117 LEU 117 137 137 LEU LEU A . n A 1 118 ASN 118 138 138 ASN ASN A . n A 1 119 VAL 119 139 139 VAL VAL A . n A 1 120 ILE 120 140 140 ILE ILE A . n A 1 121 PHE 121 141 141 PHE PHE A . n A 1 122 ARG 122 142 142 ARG ARG A . n A 1 123 GLN 123 143 143 GLN GLN A . n A 1 124 ASN 124 144 144 ASN ASN A . n A 1 125 LEU 125 145 145 LEU LEU A . n A 1 126 PRO 126 146 ? ? ? A . n A 1 127 VAL 127 147 ? ? ? A . n A 1 128 LYS 128 148 ? ? ? A . n A 1 129 GLU 129 149 ? ? ? A . n A 1 130 LYS 130 150 150 LYS LYS A . n A 1 131 HIS 131 151 151 HIS HIS A . n A 1 132 LEU 132 152 152 LEU LEU A . n A 1 133 VAL 133 153 153 VAL VAL A . n A 1 134 SER 134 154 154 SER SER A . n A 1 135 LEU 135 155 155 LEU LEU A . n A 1 136 VAL 136 156 156 VAL VAL A . n A 1 137 ARG 137 157 157 ARG ARG A . n A 1 138 ASP 138 158 158 ASP ASP A . n A 1 139 MSE 139 159 159 MSE MSE A . n A 1 140 ARG 140 160 160 ARG ARG A . n A 1 141 ALA 141 161 161 ALA ALA A . n A 1 142 THR 142 162 162 THR THR A . n A 1 143 ALA 143 163 163 ALA ALA A . n A 1 144 ALA 144 164 164 ALA ALA A . n A 1 145 GLU 145 165 165 GLU GLU A . n A 1 146 GLY 146 166 166 GLY GLY A . n A 1 147 GLU 147 167 167 GLU GLU A . n A 1 148 ASP 148 168 168 ASP ASP A . n A 1 149 ASP 149 169 169 ASP ASP A . n A 1 150 GLY 150 170 170 GLY GLY A . n A 1 151 TYR 151 171 171 TYR TYR A . n A 1 152 ILE 152 172 172 ILE ILE A . n A 1 153 HIS 153 173 173 HIS HIS A . n A 1 154 LEU 154 174 174 LEU LEU A . n A 1 155 GLU 155 175 175 GLU GLU A . n A 1 156 LEU 156 176 176 LEU LEU A . n A 1 157 ARG 157 177 177 ARG ARG A . n A 1 158 TYR 158 178 178 TYR TYR A . n A 1 159 LYS 159 179 179 LYS LYS A . n A 1 160 THR 160 180 180 THR THR A . n A 1 161 TYR 161 181 181 TYR TYR A . n A 1 162 ASP 162 182 182 ASP ASP A . n A 1 163 ASP 163 183 183 ASP ASP A . n A 1 164 VAL 164 184 ? ? ? A . n A 1 165 THR 165 185 ? ? ? A . n A 1 166 ALA 166 186 ? ? ? A . n A 1 167 ARG 167 187 ? ? ? A . n A 1 168 GLN 168 188 188 GLN GLN A . n A 1 169 ALA 169 189 189 ALA ALA A . n A 1 170 ASN 170 190 190 ASN ASN A . n A 1 171 GLY 171 191 191 GLY GLY A . n A 1 172 ALA 172 192 192 ALA ALA A . n A 1 173 VAL 173 193 193 VAL VAL A . n A 1 174 SER 174 194 194 SER SER A . n A 1 175 PHE 175 195 195 PHE PHE A . n A 1 176 ASN 176 196 196 ASN ASN A . n A 1 177 LEU 177 197 197 LEU LEU A . n A 1 178 ASN 178 198 198 ASN ASN A . n A 1 179 SER 179 199 199 SER SER A . n A 1 180 LEU 180 200 200 LEU LEU A . n A 1 181 ASP 181 201 201 ASP ASP A . n A 1 182 LEU 182 202 202 LEU LEU A . n A 1 183 THR 183 203 203 THR THR A . n A 1 184 GLY 184 204 204 GLY GLY A . n A 1 185 LYS 185 205 205 LYS LYS A . n A 1 186 LYS 186 206 206 LYS LYS A . n A 1 187 GLY 187 207 207 GLY GLY A . n A 1 188 ILE 188 208 208 ILE ILE A . n A 1 189 LYS 189 209 209 LYS LYS A . n A 1 190 VAL 190 210 210 VAL VAL A . n A 1 191 LYS 191 211 211 LYS LYS A . n A 1 192 LEU 192 212 212 LEU LEU A . n A 1 193 ASN 193 213 213 ASN ASN A . n A 1 194 SER 194 214 214 SER SER A . n A 1 195 VAL 195 215 215 VAL VAL A . n A 1 196 LYS 196 216 216 LYS LYS A . n A 1 197 ASP 197 217 217 ASP ASP A . n A 1 198 GLY 198 218 218 GLY GLY A . n A 1 199 GLU 199 219 219 GLU GLU A . n A 1 200 THR 200 220 220 THR THR A . n A 1 201 GLU 201 221 221 GLU GLU A . n A 1 202 VAL 202 222 222 VAL VAL A . n A 1 203 VAL 203 223 223 VAL VAL A . n A 1 204 PHE 204 224 224 PHE PHE A . n A 1 205 ASN 205 225 225 ASN ASN A . n A 1 206 LEU 206 226 226 LEU LEU A . n A 1 207 LYS 207 227 227 LYS LYS A . n A 1 208 GLY 208 228 ? ? ? A . n A 1 209 GLN 209 229 ? ? ? A . n A 1 210 SER 210 230 ? ? ? A . n A 1 211 MSE 211 231 ? ? ? A . n A 1 212 PRO 212 232 ? ? ? A . n A 1 213 GLU 213 233 ? ? ? A . n A 1 214 GLU 214 234 ? ? ? A . n A 1 215 ALA 215 235 ? ? ? A . n A 1 216 LYS 216 236 ? ? ? A . n A 1 217 GLN 217 237 ? ? ? A . n A 1 218 VAL 218 238 ? ? ? A . n A 1 219 THR 219 239 ? ? ? A . n A 1 220 LEU 220 240 ? ? ? A . n A 1 221 SER 221 241 ? ? ? A . n A 1 222 ASP 222 242 ? ? ? A . n A 1 223 GLU 223 243 ? ? ? A . n A 1 224 VAL 224 244 ? ? ? A . n A 1 225 GLN 225 245 ? ? ? A . n A 1 226 ILE 226 246 ? ? ? A . n A 1 227 LYS 227 247 ? ? ? A . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 300 300 EDO EDO A . C 3 HOH 1 401 301 HOH HOH A . C 3 HOH 2 402 302 HOH HOH A . C 3 HOH 3 403 303 HOH HOH A . C 3 HOH 4 404 304 HOH HOH A . C 3 HOH 5 405 305 HOH HOH A . C 3 HOH 6 406 306 HOH HOH A . C 3 HOH 7 407 307 HOH HOH A . C 3 HOH 8 408 308 HOH HOH A . C 3 HOH 9 409 309 HOH HOH A . C 3 HOH 10 410 310 HOH HOH A . C 3 HOH 11 411 311 HOH HOH A . C 3 HOH 12 412 312 HOH HOH A . C 3 HOH 13 413 313 HOH HOH A . C 3 HOH 14 414 314 HOH HOH A . C 3 HOH 15 415 315 HOH HOH A . C 3 HOH 16 416 316 HOH HOH A . C 3 HOH 17 417 317 HOH HOH A . C 3 HOH 18 418 318 HOH HOH A . C 3 HOH 19 419 319 HOH HOH A . C 3 HOH 20 420 320 HOH HOH A . C 3 HOH 21 421 321 HOH HOH A . C 3 HOH 22 422 322 HOH HOH A . C 3 HOH 23 423 323 HOH HOH A . C 3 HOH 24 424 324 HOH HOH A . C 3 HOH 25 425 325 HOH HOH A . C 3 HOH 26 426 326 HOH HOH A . C 3 HOH 27 427 327 HOH HOH A . C 3 HOH 28 428 328 HOH HOH A . C 3 HOH 29 429 329 HOH HOH A . C 3 HOH 30 430 330 HOH HOH A . C 3 HOH 31 431 331 HOH HOH A . C 3 HOH 32 432 332 HOH HOH A . C 3 HOH 33 433 333 HOH HOH A . C 3 HOH 34 434 334 HOH HOH A . C 3 HOH 35 435 335 HOH HOH A . C 3 HOH 36 436 336 HOH HOH A . C 3 HOH 37 437 337 HOH HOH A . C 3 HOH 38 438 338 HOH HOH A . C 3 HOH 39 439 339 HOH HOH A . C 3 HOH 40 440 340 HOH HOH A . C 3 HOH 41 441 341 HOH HOH A . C 3 HOH 42 442 342 HOH HOH A . C 3 HOH 43 443 343 HOH HOH A . C 3 HOH 44 444 344 HOH HOH A . C 3 HOH 45 445 345 HOH HOH A . C 3 HOH 46 446 346 HOH HOH A . C 3 HOH 47 447 347 HOH HOH A . C 3 HOH 48 448 348 HOH HOH A . C 3 HOH 49 449 349 HOH HOH A . C 3 HOH 50 450 350 HOH HOH A . C 3 HOH 51 451 351 HOH HOH A . C 3 HOH 52 452 352 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 109 A MSE 129 ? MET SELENOMETHIONINE 2 A MSE 110 A MSE 130 ? MET SELENOMETHIONINE 3 A MSE 139 A MSE 159 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3330 ? 1 MORE -6 ? 1 'SSA (A^2)' 18940 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_556 -x,y,-z+3/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 84.1080000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 425 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-03-06 2 'Structure model' 1 1 2014-12-24 3 'Structure model' 1 2 2017-11-15 4 'Structure model' 1 3 2018-01-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Database references' 5 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' citation_author 3 5 'Structure model' database_2 4 5 'Structure model' struct_conn 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_citation_author.name' 4 5 'Structure model' '_database_2.pdbx_DOI' 5 5 'Structure model' '_database_2.pdbx_database_accession' 6 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 5 'Structure model' '_struct_ref_seq_dif.details' 8 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 9 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 10 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 9.9020 46.0960 40.5030 0.1498 0.1434 0.1538 0.0157 0.0136 0.0007 0.0758 2.6778 1.3792 -0.3548 0.2886 -1.4888 0.0229 -0.0053 -0.0175 0.0068 0.0361 -0.0649 0.0711 -0.0299 0.0215 'X-RAY DIFFRACTION' 2 ? refined 14.3270 26.4420 51.9680 0.2103 0.1877 0.1791 0.0850 -0.0801 0.0501 2.1350 0.1649 0.7392 0.5407 0.8276 0.1290 0.1134 -0.1547 0.0414 -0.4540 -0.1219 -0.0091 -0.0461 0.2314 -0.0286 'X-RAY DIFFRACTION' 3 ? refined 7.7570 27.8800 45.4940 0.2174 0.1360 0.1417 0.0308 -0.0318 0.0499 3.1284 1.8879 0.3078 0.4664 -0.8190 0.2860 -0.0649 0.0163 0.0486 0.1157 -0.2750 -0.1763 0.0838 0.0206 -0.0365 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 26 A 145 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 150 A 183 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 A 188 A 227 ? . . . . ? # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 5 XSCALE 'July 4, 2012' ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 6 REFMAC 5.7.0032 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? # _pdbx_entry_details.entry_id 4J8Q _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 22-247 OF THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 75 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 75 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 75 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 117.04 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -3.26 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 120 ? ? -162.43 60.68 2 1 ARG A 142 ? ? 63.82 -74.38 3 1 ASP A 168 ? ? 86.95 31.91 4 1 ASP A 169 ? ? -152.96 -13.39 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 167 ? CG ? A GLU 147 CG 2 1 Y 1 A GLU 167 ? CD ? A GLU 147 CD 3 1 Y 1 A GLU 167 ? OE1 ? A GLU 147 OE1 4 1 Y 1 A GLU 167 ? OE2 ? A GLU 147 OE2 5 1 Y 1 A ASP 168 ? CG ? A ASP 148 CG 6 1 Y 1 A ASP 168 ? OD1 ? A ASP 148 OD1 7 1 Y 1 A ASP 168 ? OD2 ? A ASP 148 OD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A CYS 22 ? A CYS 2 3 1 Y 1 A ASP 23 ? A ASP 3 4 1 Y 1 A ASP 24 ? A ASP 4 5 1 Y 1 A ASN 25 ? A ASN 5 6 1 Y 1 A PRO 146 ? A PRO 126 7 1 Y 1 A VAL 147 ? A VAL 127 8 1 Y 1 A LYS 148 ? A LYS 128 9 1 Y 1 A GLU 149 ? A GLU 129 10 1 Y 1 A VAL 184 ? A VAL 164 11 1 Y 1 A THR 185 ? A THR 165 12 1 Y 1 A ALA 186 ? A ALA 166 13 1 Y 1 A ARG 187 ? A ARG 167 14 1 Y 1 A GLY 228 ? A GLY 208 15 1 Y 1 A GLN 229 ? A GLN 209 16 1 Y 1 A SER 230 ? A SER 210 17 1 Y 1 A MSE 231 ? A MSE 211 18 1 Y 1 A PRO 232 ? A PRO 212 19 1 Y 1 A GLU 233 ? A GLU 213 20 1 Y 1 A GLU 234 ? A GLU 214 21 1 Y 1 A ALA 235 ? A ALA 215 22 1 Y 1 A LYS 236 ? A LYS 216 23 1 Y 1 A GLN 237 ? A GLN 217 24 1 Y 1 A VAL 238 ? A VAL 218 25 1 Y 1 A THR 239 ? A THR 219 26 1 Y 1 A LEU 240 ? A LEU 220 27 1 Y 1 A SER 241 ? A SER 221 28 1 Y 1 A ASP 242 ? A ASP 222 29 1 Y 1 A GLU 243 ? A GLU 223 30 1 Y 1 A VAL 244 ? A VAL 224 31 1 Y 1 A GLN 245 ? A GLN 225 32 1 Y 1 A ILE 246 ? A ILE 226 33 1 Y 1 A LYS 247 ? A LYS 227 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 water HOH #