HEADER TRANSFERASE/UNKNOWN FUNCTION 16-FEB-13 4J9G TITLE CRYSTAL STRUCTURE OF THE ABL-SH3 DOMAIN COMPLEXED WITH THE DESIGNED TITLE 2 HIGH-AFFINITY PEPTIDE LIGAND P7 AT PH7 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE ABL1; COMPND 3 CHAIN: A, C, E; COMPND 4 FRAGMENT: SH3 DOMAIN (UNP RESIDUES 60-121); COMPND 5 SYNONYM: ABELSON MURINE LEUKEMIA VIRAL ONCOGENE HOMOLOG 1, ABELSON COMPND 6 TYROSINE-PROTEIN KINASE 1, PROTO-ONCOGENE C-ABL, P150; COMPND 7 EC: 2.7.10.2; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: P7; COMPND 11 CHAIN: B, D, F; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 STRAIN: PBAT4; SOURCE 6 GENE: ABL, ABL1, JTK7; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES KEYWDS BETA SHANDWICH, SH3 DOMAIN, KINASE, POLY PROLINE RICH MOTIFS, KEYWDS 2 TRANSFERASE, TRANSFERASE-UNKNOWN FUNCTION COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.CAMARA-ARTIGAS REVDAT 2 20-SEP-23 4J9G 1 REMARK SEQADV LINK REVDAT 1 29-JAN-14 4J9G 0 JRNL AUTH A.CAMARA-ARTIGAS JRNL TITL CRYSTAL STRUCTURE OF THE ABL-SH3 DOMAIN COMPLEXED WITH THE JRNL TITL 2 DESIGNED HIGH-AFFINITY PEPTIDE LIGAND P7 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.CAMARA-ARTIGAS,A.PALENCIA,J.C.MARTINEZ,I.LUQUE,J.A.GAVIRA, REMARK 1 AUTH 2 J.M.GARCIA-RUIZ REMARK 1 TITL CRYSTALLIZATION BY CAPILLARY COUNTER-DIFFUSION AND STRUCTURE REMARK 1 TITL 2 DETERMINATION OF THE N114A MUTANT OF THE SH3 DOMAIN OF ABL REMARK 1 TITL 3 TYROSINE KINASE COMPLEXED WITH A HIGH-AFFINITY PEPTIDE REMARK 1 TITL 4 LIGAND. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 63 646 2007 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 17452790 REMARK 1 DOI 10.1107/S0907444907011109 REMARK 1 REFERENCE 2 REMARK 1 AUTH A.PALENCIA,A.CAMARA-ARTIGAS,M.T.PISABARRO,J.C.MARTINEZ, REMARK 1 AUTH 2 I.LUQUE REMARK 1 TITL ROLE OF INTERFACIAL WATER MOLECULES IN PROLINE-RICH LIGAND REMARK 1 TITL 2 RECOGNITION BY THE SRC HOMOLOGY 3 DOMAIN OF ABL. REMARK 1 REF J.BIOL.CHEM. V. 285 2823 2010 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 19906645 REMARK 1 DOI 10.1074/JBC.M109.048033 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 17945 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 897 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.7094 - 4.1193 0.99 2764 130 0.1870 0.2398 REMARK 3 2 4.1193 - 3.2702 1.00 2776 140 0.1671 0.1608 REMARK 3 3 3.2702 - 2.8570 1.00 2750 143 0.1860 0.2049 REMARK 3 4 2.8570 - 2.5958 1.00 2775 149 0.2064 0.2593 REMARK 3 5 2.5958 - 2.4098 0.99 2695 174 0.2160 0.2695 REMARK 3 6 2.4098 - 2.2677 0.99 2730 139 0.2179 0.2703 REMARK 3 7 2.2677 - 2.1542 0.97 2711 112 0.2704 0.3420 REMARK 3 8 2.1542 - 2.0604 1.00 2734 173 0.2358 0.3025 REMARK 3 9 2.0604 - 1.9811 1.00 2798 113 0.2338 0.2940 REMARK 3 10 1.9811 - 1.9127 0.99 2705 175 0.2891 0.3403 REMARK 3 11 1.9127 - 1.8529 0.99 2785 143 0.2807 0.3185 REMARK 3 12 1.8529 - 1.8000 0.69 1854 119 0.2788 0.2694 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.630 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.63 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 1657 REMARK 3 ANGLE : 1.394 2273 REMARK 3 CHIRALITY : 0.072 237 REMARK 3 PLANARITY : 0.012 300 REMARK 3 DIHEDRAL : 11.931 593 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4J9G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-FEB-13. REMARK 100 THE DEPOSITION ID IS D_1000077763. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97951 REMARK 200 MONOCHROMATOR : SI(111) CHANNEL-CUT CRYSTAL REMARK 200 MONOCHROMATOR AND A PAIR OF KB REMARK 200 MIRRORS REMARK 200 OPTICS : VERTICAL FOCUSING MIRROR (VFM) REMARK 200 AND A HORIZONTAL FOCUSING MIRROR REMARK 200 (HFM), MANUFACTURED BY IRELEC. REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.1.26 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17945 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 74.746 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : 0.06900 REMARK 200 FOR THE DATA SET : 14.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 68.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.54300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2O88 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M AMMONIUM SULPHATE, 50 MM LITIUM REMARK 280 FORMIATE, 10% GLICEROL, AND 0.1 M MOPS , PH 7, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.15733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 15.07867 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 15.07867 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 30.15733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 3910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 202 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 210 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 59 REMARK 465 GLU A 60 REMARK 465 ASN A 61 REMARK 465 ASP A 62 REMARK 465 SER A 121 REMARK 465 MET C 59 REMARK 465 GLU C 60 REMARK 465 ASN C 61 REMARK 465 ASP C 62 REMARK 465 ASN C 120 REMARK 465 SER C 121 REMARK 465 MET E 59 REMARK 465 GLU E 60 REMARK 465 ASN E 61 REMARK 465 ASP E 62 REMARK 465 ASN E 120 REMARK 465 SER E 121 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ACE B 0 O - C - N ANGL. DEV. = -14.0 DEGREES REMARK 500 ACE D 0 O - C - N ANGL. DEV. = -19.5 DEGREES REMARK 500 ACE F 0 O - C - N ANGL. DEV. = 15.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 E 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL E 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN B OF P7 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN D OF P7 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN F OF P7 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2O88 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE N114A MUTANT OF ABL-SH3 DOMAIN COMPLEXED REMARK 900 WITH A DESIGNED HIGH-AFFINITY PEPTIDE LIGAND: IMPLICATIONS FOR SH3- REMARK 900 LIGAND INTERACTIONS REMARK 900 RELATED ID: 3EG0 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE N114T MUTANT OF ABL-SH3 DOMAIN REMARK 900 RELATED ID: 3EG1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE N114Q MUTANT OF ABL-SH3 DOMAIN COMPLEXED REMARK 900 WITH A DESIGNED HIGH-AFFINITY PEPTIDE LIGAND: IMPLICATIONS FOR SH3- REMARK 900 LIGAND INTERACTIONS REMARK 900 RELATED ID: 3EG2 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE N114Q MUTANT OF ABL-SH3 DOMAIN REMARK 900 RELATED ID: 3EG3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE N114A MUTANT OF ABL-SH3 DOMAIN REMARK 900 RELATED ID: 3EGU RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE N114A MUTANT OF ABL-SH3 DOMAIN REMARK 900 RELATED ID: 4J9F RELATED DB: PDB REMARK 900 RELATED ID: 4J9H RELATED DB: PDB REMARK 900 RELATED ID: 4J9I RELATED DB: PDB DBREF 4J9G A 60 121 UNP P00519 ABL1_HUMAN 60 121 DBREF 4J9G C 60 121 UNP P00519 ABL1_HUMAN 60 121 DBREF 4J9G E 60 121 UNP P00519 ABL1_HUMAN 60 121 DBREF 4J9G B 0 10 PDB 4J9G 4J9G 0 10 DBREF 4J9G D 0 10 PDB 4J9G 4J9G 0 10 DBREF 4J9G F 0 10 PDB 4J9G 4J9G 0 10 SEQADV 4J9G MET A 59 UNP P00519 INITIATING METHIONINE SEQADV 4J9G MET C 59 UNP P00519 INITIATING METHIONINE SEQADV 4J9G MET E 59 UNP P00519 INITIATING METHIONINE SEQRES 1 A 63 MET GLU ASN ASP PRO ASN LEU PHE VAL ALA LEU TYR ASP SEQRES 2 A 63 PHE VAL ALA SER GLY ASP ASN THR LEU SER ILE THR LYS SEQRES 3 A 63 GLY GLU LYS LEU ARG VAL LEU GLY TYR ASN HIS ASN GLY SEQRES 4 A 63 GLU TRP CYS GLU ALA GLN THR LYS ASN GLY GLN GLY TRP SEQRES 5 A 63 VAL PRO SER ASN TYR ILE THR PRO VAL ASN SER SEQRES 1 B 11 ACE ALA PRO THR TYR PRO PRO PRO PRO PRO PRO SEQRES 1 C 63 MET GLU ASN ASP PRO ASN LEU PHE VAL ALA LEU TYR ASP SEQRES 2 C 63 PHE VAL ALA SER GLY ASP ASN THR LEU SER ILE THR LYS SEQRES 3 C 63 GLY GLU LYS LEU ARG VAL LEU GLY TYR ASN HIS ASN GLY SEQRES 4 C 63 GLU TRP CYS GLU ALA GLN THR LYS ASN GLY GLN GLY TRP SEQRES 5 C 63 VAL PRO SER ASN TYR ILE THR PRO VAL ASN SER SEQRES 1 D 11 ACE ALA PRO THR TYR PRO PRO PRO PRO PRO PRO SEQRES 1 E 63 MET GLU ASN ASP PRO ASN LEU PHE VAL ALA LEU TYR ASP SEQRES 2 E 63 PHE VAL ALA SER GLY ASP ASN THR LEU SER ILE THR LYS SEQRES 3 E 63 GLY GLU LYS LEU ARG VAL LEU GLY TYR ASN HIS ASN GLY SEQRES 4 E 63 GLU TRP CYS GLU ALA GLN THR LYS ASN GLY GLN GLY TRP SEQRES 5 E 63 VAL PRO SER ASN TYR ILE THR PRO VAL ASN SER SEQRES 1 F 11 ACE ALA PRO THR TYR PRO PRO PRO PRO PRO PRO HET ACE B 0 3 HET ACE D 0 3 HET ACE F 0 3 HET SO4 E 201 5 HET GOL E 202 9 HETNAM ACE ACETYL GROUP HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ACE 3(C2 H4 O) FORMUL 7 SO4 O4 S 2- FORMUL 8 GOL C3 H8 O3 FORMUL 9 HOH *89(H2 O) SHEET 1 A 5 GLY A 107 PRO A 112 0 SHEET 2 A 5 TRP A 99 THR A 104 -1 N CYS A 100 O VAL A 111 SHEET 3 A 5 LYS A 87 TYR A 93 -1 N LEU A 91 O GLU A 101 SHEET 4 A 5 LEU A 65 ALA A 68 -1 N PHE A 66 O LEU A 88 SHEET 5 A 5 ILE A 116 PRO A 118 -1 O THR A 117 N VAL A 67 SHEET 1 B 6 GLY C 107 PRO C 112 0 SHEET 2 B 6 TRP C 99 THR C 104 -1 N THR C 104 O GLY C 107 SHEET 3 B 6 LYS C 87 ASN C 94 -1 N LEU C 91 O GLU C 101 SHEET 4 B 6 LYS E 87 ASN E 94 -1 O TYR E 93 N TYR C 93 SHEET 5 B 6 TRP E 99 THR E 104 -1 O GLU E 101 N LEU E 91 SHEET 6 B 6 GLY E 107 PRO E 112 -1 O VAL E 111 N CYS E 100 SHEET 1 C 6 ILE C 116 PRO C 118 0 SHEET 2 C 6 LEU C 65 ALA C 68 -1 N VAL C 67 O THR C 117 SHEET 3 C 6 LYS C 87 ASN C 94 -1 O LEU C 88 N PHE C 66 SHEET 4 C 6 LYS E 87 ASN E 94 -1 O TYR E 93 N TYR C 93 SHEET 5 C 6 LEU E 65 ALA E 68 -1 N PHE E 66 O LEU E 88 SHEET 6 C 6 ILE E 116 PRO E 118 -1 O THR E 117 N VAL E 67 LINK C ACE B 0 N ALA B 1 1555 1555 1.33 LINK C ACE D 0 N ALA D 1 1555 1555 1.35 LINK C ACE F 0 N ALA F 1 1555 1555 1.33 SITE 1 AC1 4 GLU E 86 LYS E 87 LYS E 105 HOH E 310 SITE 1 AC2 8 GLY C 92 GLU C 101 LEU E 91 GLY E 92 SITE 2 AC2 8 TYR E 93 GLU E 101 HOH E 303 HOH E 323 SITE 1 AC3 16 TYR A 70 SER A 75 GLY A 76 THR A 79 SITE 2 AC3 16 LYS A 84 ASN A 94 GLU A 98 TRP A 99 SITE 3 AC3 16 LYS A 105 ASN A 106 TRP A 110 TYR A 115 SITE 4 AC3 16 HOH A 211 HOH B 101 HOH B 102 HOH B 104 SITE 1 AC4 17 TYR C 70 SER C 75 GLY C 76 ASP C 77 SITE 2 AC4 17 ASN C 78 THR C 79 ASN C 94 GLU C 98 SITE 3 AC4 17 TRP C 99 LYS C 105 ASN C 106 TRP C 110 SITE 4 AC4 17 TYR C 115 HOH D 101 TYR E 70 LYS E 84 SITE 5 AC4 17 HOH E 304 SITE 1 AC5 18 TYR C 70 LYS C 84 SER E 75 GLY E 76 SITE 2 AC5 18 ASP E 77 ASN E 78 THR E 79 ASN E 94 SITE 3 AC5 18 GLU E 98 TRP E 99 LYS E 105 ASN E 106 SITE 4 AC5 18 TRP E 110 TYR E 115 HOH E 305 HOH E 319 SITE 5 AC5 18 HOH F 101 HOH F 102 CRYST1 86.309 86.309 45.236 90.00 90.00 120.00 P 32 2 1 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011586 0.006689 0.000000 0.00000 SCALE2 0.000000 0.013379 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022106 0.00000