HEADER HYDROLASE 18-FEB-13 4JA7 TITLE RAT PP5 CO-CRYSTALLIZED WITH P5SA-2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN PHOSPHATASE 5; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PP5, PROTEIN PHOSPHATASE T, PPT; COMPND 5 EC: 3.1.3.16; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: BROWN RAT,RAT,RATS; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: PPP5C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS PP5, ACTIVATION, TAU-DEPHOSPHORYLATION, NEURODEGENERATIVE DISEASE, KEYWDS 2 SER/THR-PROTEIN PHOSPHATASE DOMAIN, TETRATRICOPEPTIDE REPEAT DOMAIN, KEYWDS 3 HSP90, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR V.HASLBECK,M.HELMUTH,F.ALTE,G.POPOWICZ,W.SCHMIDT,M.WEIWAD,G.FISCHER, AUTHOR 2 G.GEMMECKER,M.SATTLER,F.STRIGGOW,M.GROLL,K.RICHTER REVDAT 5 20-SEP-23 4JA7 1 REMARK SEQADV LINK REVDAT 4 10-AUG-16 4JA7 1 JRNL REVDAT 3 10-FEB-16 4JA7 1 JRNL REVDAT 2 11-NOV-15 4JA7 1 JRNL REMARK REVDAT 1 19-FEB-14 4JA7 0 JRNL AUTH V.HASLBECK,A.DRAZIC,J.M.ECKL,F.ALTE,M.HELMUTH,G.POPOWICZ, JRNL AUTH 2 W.SCHMIDT,F.BRAUN,M.WEIWAD,G.FISCHER,G.GEMMECKER,M.SATTLER, JRNL AUTH 3 F.STRIGGOW,M.GROLL,K.RICHTER JRNL TITL SELECTIVE ACTIVATORS OF PROTEIN PHOSPHATASE 5 TARGET THE JRNL TITL 2 AUTO-INHIBITORY MECHANISM. JRNL REF BIOSCI.REP. V. 35 2015 JRNL REFN ISSN 0144-8463 JRNL PMID 26182372 JRNL DOI 10.1042/BSR20150042 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 32308 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1701 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.06 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1981 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.35 REMARK 3 BIN R VALUE (WORKING SET) : 0.2340 REMARK 3 BIN FREE R VALUE SET COUNT : 102 REMARK 3 BIN FREE R VALUE : 0.2980 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3747 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 106 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.97000 REMARK 3 B22 (A**2) : 0.97000 REMARK 3 B33 (A**2) : -1.95000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.209 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.185 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.130 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.787 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3837 ; 0.015 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5166 ; 1.684 ; 1.961 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 464 ; 6.678 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 189 ;39.702 ;24.550 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 684 ;18.053 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;20.688 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 551 ; 0.117 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2918 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 23 A 497 REMARK 3 ORIGIN FOR THE GROUP (A): -15.7487 1.1733 -22.9007 REMARK 3 T TENSOR REMARK 3 T11: 0.1265 T22: 0.0138 REMARK 3 T33: 0.0523 T12: 0.0351 REMARK 3 T13: -0.0187 T23: -0.0011 REMARK 3 L TENSOR REMARK 3 L11: 0.0725 L22: 0.2965 REMARK 3 L33: 0.2728 L12: 0.0270 REMARK 3 L13: 0.0595 L23: -0.0356 REMARK 3 S TENSOR REMARK 3 S11: -0.0083 S12: -0.0150 S13: -0.0099 REMARK 3 S21: 0.0473 S22: 0.0148 S23: -0.0292 REMARK 3 S31: -0.0336 S32: -0.0385 S33: -0.0065 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4JA7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-FEB-13. REMARK 100 THE DEPOSITION ID IS D_1000077790. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : LN2 COOLED FIXED-EXIT. SI(111) REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34075 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 8.400 REMARK 200 R MERGE (I) : 0.03800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.43500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1WAO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MG(NO3)2, 20% PEG 3350, PH 7.8, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 182.83500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 25.55000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 25.55000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 91.41750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 25.55000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 25.55000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 274.25250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 25.55000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 25.55000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 91.41750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 25.55000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 25.55000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 274.25250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 182.83500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 12 REMARK 465 SER A 13 REMARK 465 HIS A 14 REMARK 465 MET A 15 REMARK 465 ARG A 16 REMARK 465 ASP A 17 REMARK 465 GLU A 18 REMARK 465 PRO A 19 REMARK 465 PRO A 20 REMARK 465 ALA A 21 REMARK 465 GLU A 22 REMARK 465 ARG A 150 REMARK 465 ALA A 151 REMARK 465 ILE A 152 REMARK 465 ALA A 153 REMARK 465 GLY A 154 REMARK 465 ASP A 155 REMARK 465 GLU A 156 REMARK 465 HIS A 157 REMARK 465 ARG A 158 REMARK 465 MET A 498 REMARK 465 MET A 499 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 610 O HOH A 700 2.03 REMARK 500 O HOH A 677 O HOH A 701 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 244 CG HIS A 244 CD2 0.059 REMARK 500 HIS A 352 CG HIS A 352 CD2 0.055 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 101 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG A 371 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG A 371 NE - CZ - NH2 ANGL. DEV. = -5.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 43 73.96 -106.14 REMARK 500 ASN A 264 63.20 -153.59 REMARK 500 ASP A 274 151.75 79.73 REMARK 500 ARG A 275 -66.68 72.20 REMARK 500 GLU A 305 58.01 -100.10 REMARK 500 TYR A 323 -115.41 -129.67 REMARK 500 ARG A 373 -179.07 -173.96 REMARK 500 SER A 403 -151.06 62.27 REMARK 500 SER A 426 -122.61 -128.86 REMARK 500 HIS A 427 -31.99 75.95 REMARK 500 ASN A 483 63.59 -66.14 REMARK 500 ASN A 491 -178.89 -62.83 REMARK 500 GLN A 495 77.82 -114.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 242 OD2 REMARK 620 2 ASP A 271 OD2 99.1 REMARK 620 3 HOH A 610 O 152.8 106.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 501 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 271 OD2 REMARK 620 2 ASN A 303 OD1 81.2 REMARK 620 3 HOH A 700 O 94.5 84.1 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1WAO RELATED DB: PDB REMARK 900 HUMAN PP5 WILD TYPE REMARK 900 RELATED ID: 4JA9 RELATED DB: PDB DBREF 4JA7 A 16 499 UNP P53042 PPP5_RAT 16 499 SEQADV 4JA7 GLY A 12 UNP P53042 EXPRESSION TAG SEQADV 4JA7 SER A 13 UNP P53042 EXPRESSION TAG SEQADV 4JA7 HIS A 14 UNP P53042 EXPRESSION TAG SEQADV 4JA7 MET A 15 UNP P53042 EXPRESSION TAG SEQRES 1 A 488 GLY SER HIS MET ARG ASP GLU PRO PRO ALA GLU GLY THR SEQRES 2 A 488 LEU LYS ARG ALA GLU GLU LEU LYS THR GLN ALA ASN ASP SEQRES 3 A 488 TYR PHE LYS ALA LYS ASP TYR GLU ASN ALA ILE LYS PHE SEQRES 4 A 488 TYR SER GLN ALA ILE GLU LEU ASN PRO SER ASN ALA ILE SEQRES 5 A 488 TYR TYR GLY ASN ARG SER LEU ALA TYR LEU ARG THR GLU SEQRES 6 A 488 CYS TYR GLY TYR ALA LEU GLY ASP ALA THR ARG ALA ILE SEQRES 7 A 488 GLU LEU ASP LYS LYS TYR ILE LYS GLY TYR TYR ARG ARG SEQRES 8 A 488 ALA ALA SER ASN MET ALA LEU GLY LYS PHE ARG ALA ALA SEQRES 9 A 488 LEU ARG ASP TYR GLU THR VAL VAL LYS VAL LYS PRO ASN SEQRES 10 A 488 ASP LYS ASP ALA LYS MET LYS TYR GLN GLU CYS SER LYS SEQRES 11 A 488 ILE VAL LYS GLN LYS ALA PHE GLU ARG ALA ILE ALA GLY SEQRES 12 A 488 ASP GLU HIS ARG ARG SER VAL VAL ASP SER LEU ASP ILE SEQRES 13 A 488 GLU SER MET THR ILE GLU ASP GLU TYR SER GLY PRO LYS SEQRES 14 A 488 LEU GLU ASP GLY LYS VAL THR ILE THR PHE MET LYS ASP SEQRES 15 A 488 LEU MET GLN TRP TYR LYS ASP GLN LYS LYS LEU HIS ARG SEQRES 16 A 488 LYS CYS ALA TYR GLN ILE LEU VAL GLN VAL LYS GLU VAL SEQRES 17 A 488 LEU CYS LYS LEU SER THR LEU VAL GLU THR THR LEU LYS SEQRES 18 A 488 GLU THR GLU LYS ILE THR VAL CYS GLY ASP THR HIS GLY SEQRES 19 A 488 GLN PHE TYR ASP LEU LEU ASN ILE PHE GLU LEU ASN GLY SEQRES 20 A 488 LEU PRO SER GLU THR ASN PRO TYR ILE PHE ASN GLY ASP SEQRES 21 A 488 PHE VAL ASP ARG GLY SER PHE SER VAL GLU VAL ILE LEU SEQRES 22 A 488 THR LEU PHE GLY PHE LYS LEU LEU TYR PRO ASP HIS PHE SEQRES 23 A 488 HIS LEU LEU ARG GLY ASN HIS GLU THR ASP ASN MET ASN SEQRES 24 A 488 GLN ILE TYR GLY PHE GLU GLY GLU VAL LYS ALA LYS TYR SEQRES 25 A 488 THR ALA GLN MET TYR GLU LEU PHE SER GLU VAL PHE GLU SEQRES 26 A 488 TRP LEU PRO LEU ALA GLN CYS ILE ASN GLY LYS VAL LEU SEQRES 27 A 488 ILE MET HIS GLY GLY LEU PHE SER GLU ASP GLY VAL THR SEQRES 28 A 488 LEU ASP ASP ILE ARG LYS ILE GLU ARG ASN ARG GLN PRO SEQRES 29 A 488 PRO ASP SER GLY PRO MET CYS ASP LEU LEU TRP SER ASP SEQRES 30 A 488 PRO GLN PRO GLN ASN GLY ARG SER VAL SER LYS ARG GLY SEQRES 31 A 488 VAL SER CYS GLN PHE GLY PRO ASP VAL THR LYS ALA PHE SEQRES 32 A 488 LEU GLU GLU ASN GLN LEU ASP TYR ILE ILE ARG SER HIS SEQRES 33 A 488 GLU VAL LYS ALA GLU GLY TYR GLU VAL ALA HIS GLY GLY SEQRES 34 A 488 ARG CYS VAL THR VAL PHE SER ALA PRO ASN TYR CYS ASP SEQRES 35 A 488 GLN MET GLY ASN LYS ALA SER TYR ILE HIS LEU GLN GLY SEQRES 36 A 488 SER ASP LEU ARG PRO GLN PHE HIS GLN PHE THR ALA VAL SEQRES 37 A 488 PRO HIS PRO ASN VAL LYS PRO MET ALA TYR ALA ASN THR SEQRES 38 A 488 LEU LEU GLN LEU GLY MET MET HET MG A 501 1 HET MG A 502 1 HETNAM MG MAGNESIUM ION FORMUL 2 MG 2(MG 2+) FORMUL 4 HOH *106(H2 O) HELIX 1 1 GLY A 23 ALA A 41 1 19 HELIX 2 2 ASP A 43 ASN A 58 1 16 HELIX 3 3 ASN A 61 THR A 75 1 15 HELIX 4 4 CYS A 77 ASP A 92 1 16 HELIX 5 5 TYR A 95 LEU A 109 1 15 HELIX 6 6 LYS A 111 LYS A 126 1 16 HELIX 7 7 ASP A 129 GLU A 149 1 21 HELIX 8 8 SER A 160 LEU A 165 5 6 HELIX 9 9 ASP A 166 MET A 170 5 5 HELIX 10 10 THR A 187 ASP A 200 1 14 HELIX 11 11 HIS A 205 LYS A 222 1 18 HELIX 12 12 GLN A 246 GLY A 258 1 13 HELIX 13 13 PHE A 278 TYR A 293 1 16 HELIX 14 14 THR A 306 GLY A 314 1 9 HELIX 15 15 GLY A 314 TYR A 323 1 10 HELIX 16 16 THR A 324 GLU A 336 1 13 HELIX 17 17 THR A 362 LYS A 368 1 7 HELIX 18 18 GLY A 379 SER A 387 1 9 HELIX 19 19 GLY A 407 GLN A 419 1 13 HELIX 20 20 HIS A 438 GLY A 440 5 3 HELIX 21 21 ASN A 450 GLN A 454 5 5 SHEET 1 A 6 LEU A 226 THR A 229 0 SHEET 2 A 6 ALA A 341 ILE A 344 1 O CYS A 343 N VAL A 227 SHEET 3 A 6 VAL A 348 MET A 351 -1 O ILE A 350 N GLN A 342 SHEET 4 A 6 TYR A 422 ARG A 425 1 O ILE A 424 N LEU A 349 SHEET 5 A 6 CYS A 442 VAL A 445 1 O VAL A 443 N ARG A 425 SHEET 6 A 6 TYR A 434 ALA A 437 -1 N ALA A 437 O CYS A 442 SHEET 1 B 5 PHE A 297 LEU A 300 0 SHEET 2 B 5 TYR A 266 ASN A 269 1 N TYR A 266 O HIS A 298 SHEET 3 B 5 LYS A 236 CYS A 240 1 N CYS A 240 O ILE A 267 SHEET 4 B 5 ALA A 459 GLN A 465 -1 O LEU A 464 N ILE A 237 SHEET 5 B 5 ASP A 468 PHE A 476 -1 O HIS A 474 N TYR A 461 SHEET 1 C 3 ASP A 388 PRO A 389 0 SHEET 2 C 3 CYS A 404 PHE A 406 1 O PHE A 406 N ASP A 388 SHEET 3 C 3 ARG A 395 VAL A 397 -1 N SER A 396 O GLN A 405 LINK OD2 ASP A 242 MG MG A 502 1555 1555 2.19 LINK OD2 ASP A 271 MG MG A 501 1555 1555 2.22 LINK OD2 ASP A 271 MG MG A 502 1555 1555 2.07 LINK OD1 ASN A 303 MG MG A 501 1555 1555 2.12 LINK MG MG A 501 O HOH A 700 1555 1555 2.96 LINK MG MG A 502 O HOH A 610 1555 1555 2.36 SITE 1 AC1 6 ASP A 271 ASN A 303 HIS A 352 HIS A 427 SITE 2 AC1 6 MG A 502 HOH A 700 SITE 1 AC2 5 ASP A 242 HIS A 244 ASP A 271 MG A 501 SITE 2 AC2 5 HOH A 610 CRYST1 51.100 51.100 365.670 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019569 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019569 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002735 0.00000