HEADER ISOMERASE 19-FEB-13 4JBD TITLE CRYSTAL STRUCTURE OF PPUT_1285, A PUTATIVE HYDROXYPROLINE EPIMERASE TITLE 2 FROM PSEUDOMONAS PUTIDA F1 (TARGET EFI-506500), OPEN FORM, SPACE TITLE 3 GROUP I2, BOUND CITRATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROLINE RACEMASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA; SOURCE 3 ORGANISM_TAXID: 351746; SOURCE 4 STRAIN: F1 / ATCC 700007; SOURCE 5 GENE: PPUT_1285; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS PUTATIVE HYDROXYPROLINE EPIMERASE, ENZYME FUNCTION INITIATIVE, EFI, KEYWDS 2 STRUCTURAL GENOMICS, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.W.VETTING,R.TORO,R.BHOSLE,N.F.AL OBAIDI,L.L.MORISCO,S.R.WASSERMAN, AUTHOR 2 S.SOJITRA,E.WASHINGTON,A.SCOTT GLENN,S.CHOWDHURY,B.EVANS,J.HAMMONDS, AUTHOR 3 M.STEAD,B.HILLERICH,J.LOVE,R.D.SEIDEL,H.J.IMKER,J.A.GERLT,S.C.ALMO, AUTHOR 4 ENZYME FUNCTION INITIATIVE (EFI) REVDAT 3 20-SEP-23 4JBD 1 REMARK SEQADV REVDAT 2 28-MAY-14 4JBD 1 REMARK REVDAT 1 13-MAR-13 4JBD 0 JRNL AUTH M.W.VETTING,R.TORO,R.BHOSLE,N.F.AL OBAIDI,L.L.MORISCO, JRNL AUTH 2 S.R.WASSERMAN,S.SOJITRA,E.WASHINGTON,A.SCOTT GLENN, JRNL AUTH 3 S.CHOWDHURY,B.EVANS,J.HAMMONDS,M.STEAD,B.HILLERICH,J.LOVE, JRNL AUTH 4 R.D.SEIDEL,H.J.IMKER,J.A.GERLT,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF PPUT_1285, A PUTATIVE HYDROXYPROLINE JRNL TITL 2 EPIMERASE FROM PSEUDOMONAS PUTIDA F1 (TARGET EFI-506500), JRNL TITL 3 OPEN FORM, SPACE GROUP I2, BOUND CITRATE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.12 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 82712 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.184 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4138 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 22.1215 - 4.0315 0.96 2593 147 0.1680 0.2136 REMARK 3 2 4.0315 - 3.2030 1.00 2672 115 0.1396 0.1423 REMARK 3 3 3.2030 - 2.7991 1.00 2647 147 0.1411 0.1740 REMARK 3 4 2.7991 - 2.5435 1.00 2638 158 0.1428 0.1560 REMARK 3 5 2.5435 - 2.3615 1.00 2618 147 0.1360 0.1545 REMARK 3 6 2.3615 - 2.2224 1.00 2636 137 0.1300 0.1787 REMARK 3 7 2.2224 - 2.1112 1.00 2672 128 0.1337 0.1523 REMARK 3 8 2.1112 - 2.0193 1.00 2607 135 0.1368 0.1377 REMARK 3 9 2.0193 - 1.9416 1.00 2573 167 0.1407 0.1872 REMARK 3 10 1.9416 - 1.8747 1.00 2654 146 0.1394 0.1812 REMARK 3 11 1.8747 - 1.8161 1.00 2637 131 0.1440 0.1450 REMARK 3 12 1.8161 - 1.7642 1.00 2638 130 0.1358 0.1512 REMARK 3 13 1.7642 - 1.7178 1.00 2590 131 0.1445 0.2036 REMARK 3 14 1.7178 - 1.6759 1.00 2605 148 0.1465 0.1815 REMARK 3 15 1.6759 - 1.6378 1.00 2603 149 0.1563 0.1916 REMARK 3 16 1.6378 - 1.6029 1.00 2603 136 0.1587 0.2044 REMARK 3 17 1.6029 - 1.5709 1.00 2638 148 0.1657 0.1964 REMARK 3 18 1.5709 - 1.5413 1.00 2604 133 0.1711 0.2061 REMARK 3 19 1.5413 - 1.5137 1.00 2616 147 0.1808 0.2063 REMARK 3 20 1.5137 - 1.4881 1.00 2591 133 0.1872 0.1873 REMARK 3 21 1.4881 - 1.4641 1.00 2652 136 0.2020 0.2233 REMARK 3 22 1.4641 - 1.4416 1.00 2608 144 0.2126 0.2483 REMARK 3 23 1.4416 - 1.4204 1.00 2657 104 0.2172 0.2492 REMARK 3 24 1.4204 - 1.4004 1.00 2599 124 0.2319 0.2643 REMARK 3 25 1.4004 - 1.3814 1.00 2624 141 0.2435 0.2606 REMARK 3 26 1.3814 - 1.3635 1.00 2582 152 0.2512 0.2807 REMARK 3 27 1.3635 - 1.3465 1.00 2599 128 0.2674 0.2579 REMARK 3 28 1.3465 - 1.3302 0.99 2610 137 0.2754 0.2808 REMARK 3 29 1.3302 - 1.3148 0.99 2594 130 0.2844 0.3152 REMARK 3 30 1.3148 - 1.3000 1.00 2614 129 0.3045 0.3114 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 11.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2477 REMARK 3 ANGLE : 1.283 3375 REMARK 3 CHIRALITY : 0.073 360 REMARK 3 PLANARITY : 0.007 453 REMARK 3 DIHEDRAL : 14.619 886 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 1:88 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.4269 20.1223 11.2527 REMARK 3 T TENSOR REMARK 3 T11: 0.0729 T22: 0.1284 REMARK 3 T33: 0.0969 T12: -0.0179 REMARK 3 T13: 0.0047 T23: -0.0118 REMARK 3 L TENSOR REMARK 3 L11: 0.7777 L22: 0.5767 REMARK 3 L33: 0.5067 L12: 0.1044 REMARK 3 L13: 0.3430 L23: -0.1818 REMARK 3 S TENSOR REMARK 3 S11: 0.0487 S12: -0.1340 S13: -0.0009 REMARK 3 S21: 0.0197 S22: -0.0411 S23: 0.0479 REMARK 3 S31: 0.0611 S32: -0.0906 S33: 0.0258 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 89:159 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.7086 11.1609 24.0823 REMARK 3 T TENSOR REMARK 3 T11: 0.1144 T22: 0.0961 REMARK 3 T33: 0.1004 T12: -0.0228 REMARK 3 T13: 0.0068 T23: -0.0055 REMARK 3 L TENSOR REMARK 3 L11: 0.0876 L22: 0.1067 REMARK 3 L33: 0.3270 L12: -0.0983 REMARK 3 L13: 0.0237 L23: 0.0098 REMARK 3 S TENSOR REMARK 3 S11: -0.0537 S12: -0.0030 S13: -0.0080 REMARK 3 S21: 0.0264 S22: 0.0498 S23: -0.0667 REMARK 3 S31: 0.0380 S32: -0.0287 S33: 0.0053 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 160:225 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.8376 -3.5558 17.6839 REMARK 3 T TENSOR REMARK 3 T11: 0.1638 T22: 0.1214 REMARK 3 T33: 0.1262 T12: -0.0127 REMARK 3 T13: 0.0051 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 0.0910 L22: 0.5906 REMARK 3 L33: 0.2890 L12: 0.0878 REMARK 3 L13: 0.1059 L23: -0.1625 REMARK 3 S TENSOR REMARK 3 S11: -0.0589 S12: 0.0979 S13: -0.0012 REMARK 3 S21: -0.2142 S22: 0.0354 S23: -0.0042 REMARK 3 S31: 0.1337 S32: -0.0472 S33: 0.0014 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESID 226:308 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.3995 11.6885 18.7455 REMARK 3 T TENSOR REMARK 3 T11: 0.1014 T22: 0.0984 REMARK 3 T33: 0.1022 T12: -0.0043 REMARK 3 T13: -0.0011 T23: 0.0058 REMARK 3 L TENSOR REMARK 3 L11: -0.0160 L22: 0.2337 REMARK 3 L33: 0.2377 L12: -0.1165 REMARK 3 L13: 0.0591 L23: -0.0766 REMARK 3 S TENSOR REMARK 3 S11: -0.0073 S12: 0.0010 S13: -0.0170 REMARK 3 S21: 0.0709 S22: 0.0095 S23: 0.0058 REMARK 3 S31: 0.0183 S32: -0.0288 S33: -0.0042 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4JBD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-FEB-13. REMARK 100 THE DEPOSITION ID IS D_1000077832. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 0.1.27 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 82749 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 70.859 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : 0.06200 REMARK 200 FOR THE DATA SET : 7.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.73500 REMARK 200 R SYM FOR SHELL (I) : 0.73500 REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 2AZP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (15 MM HEPES PH 8.0, 150 MM REMARK 280 NACL, 5% GLYCEROL, 10 MM PYRROLE-2-CARBOXYLATE); RESERVOIR (0.2 REMARK 280 M DI-AMMONIUM HYDROGEN CITRATE, 20 %(W/V) PEG 3350). SOAK 2 REMARK 280 MINUTES IN (RESERVOIR + 20% GLYCEROL), VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 298K, PH 4.8 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 14.10336 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.08300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 70.85958 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 14.10336 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 27.08300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 70.85958 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 702 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 SER A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 255 O HOH A 645 1.95 REMARK 500 NZ LYS A 111 O HOH A 929 2.00 REMARK 500 OD2 ASP A 276 O HOH A 672 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 86 -91.38 -96.37 REMARK 500 HIS A 150 -23.66 -142.64 REMARK 500 CYS A 236 117.25 79.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT A 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-506500 RELATED DB: TARGETTRACK DBREF 4JBD A 1 308 UNP A5VZY6 A5VZY6_PSEP1 1 308 SEQADV 4JBD MET A -21 UNP A5VZY6 EXPRESSION TAG SEQADV 4JBD HIS A -20 UNP A5VZY6 EXPRESSION TAG SEQADV 4JBD HIS A -19 UNP A5VZY6 EXPRESSION TAG SEQADV 4JBD HIS A -18 UNP A5VZY6 EXPRESSION TAG SEQADV 4JBD HIS A -17 UNP A5VZY6 EXPRESSION TAG SEQADV 4JBD HIS A -16 UNP A5VZY6 EXPRESSION TAG SEQADV 4JBD HIS A -15 UNP A5VZY6 EXPRESSION TAG SEQADV 4JBD SER A -14 UNP A5VZY6 EXPRESSION TAG SEQADV 4JBD SER A -13 UNP A5VZY6 EXPRESSION TAG SEQADV 4JBD GLY A -12 UNP A5VZY6 EXPRESSION TAG SEQADV 4JBD VAL A -11 UNP A5VZY6 EXPRESSION TAG SEQADV 4JBD ASP A -10 UNP A5VZY6 EXPRESSION TAG SEQADV 4JBD LEU A -9 UNP A5VZY6 EXPRESSION TAG SEQADV 4JBD GLY A -8 UNP A5VZY6 EXPRESSION TAG SEQADV 4JBD THR A -7 UNP A5VZY6 EXPRESSION TAG SEQADV 4JBD GLU A -6 UNP A5VZY6 EXPRESSION TAG SEQADV 4JBD ASN A -5 UNP A5VZY6 EXPRESSION TAG SEQADV 4JBD LEU A -4 UNP A5VZY6 EXPRESSION TAG SEQADV 4JBD TYR A -3 UNP A5VZY6 EXPRESSION TAG SEQADV 4JBD PHE A -2 UNP A5VZY6 EXPRESSION TAG SEQADV 4JBD GLN A -1 UNP A5VZY6 EXPRESSION TAG SEQADV 4JBD SER A 0 UNP A5VZY6 EXPRESSION TAG SEQRES 1 A 330 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 330 GLY THR GLU ASN LEU TYR PHE GLN SER MET LYS GLN ILE SEQRES 3 A 330 HIS VAL ILE ASP SER HIS THR GLY GLY GLU PRO THR ARG SEQRES 4 A 330 LEU VAL MET LYS GLY PHE PRO GLN LEU HIS GLY ARG SER SEQRES 5 A 330 MET ALA GLU GLN ARG ASP GLU LEU ARG GLU LEU HIS ASP SEQRES 6 A 330 ARG TRP ARG ARG ALA CYS LEU LEU GLU PRO ARG GLY ASN SEQRES 7 A 330 ASP VAL LEU VAL GLY ALA LEU TYR CYS PRO PRO VAL SER SEQRES 8 A 330 ALA ASP ALA THR CYS GLY VAL ILE PHE PHE ASN ASN ALA SEQRES 9 A 330 GLY TYR LEU ASN MET CYS GLY HIS GLY THR ILE GLY LEU SEQRES 10 A 330 VAL ALA SER LEU GLN HIS LEU GLY LEU ILE ALA PRO GLY SEQRES 11 A 330 VAL HIS LYS ILE ASP THR PRO VAL GLY GLN VAL SER ALA SEQRES 12 A 330 THR LEU HIS GLU ASP GLY ALA ILE THR VAL ALA ASN VAL SEQRES 13 A 330 PRO SER TYR ARG TYR ARG GLN HIS VAL ALA VAL ASN VAL SEQRES 14 A 330 PRO GLY HIS GLY VAL VAL HIS GLY ASP ILE ALA TRP GLY SEQRES 15 A 330 GLY ASN TRP PHE PHE LEU VAL ALA GLU HIS GLY GLN ARG SEQRES 16 A 330 ILE GLU LEU ASP ASN ARG GLU VAL LEU THR GLU TYR THR SEQRES 17 A 330 TRP ALA MET LEU LYS ALA LEU GLU ALA GLN GLY ILE THR SEQRES 18 A 330 GLY GLU ASN GLY ALA PRO ILE ASP HIS VAL GLU LEU PHE SEQRES 19 A 330 ALA ASP ASP PRO ASN ALA ASP SER ARG ASN PHE VAL MET SEQRES 20 A 330 CYS PRO GLY LYS ALA TYR ASP ARG SER PRO CYS GLY THR SEQRES 21 A 330 GLY THR SER ALA LYS LEU ALA CYS LEU ALA ALA ASP GLY SEQRES 22 A 330 THR LEU ALA GLU GLY GLN THR TRP VAL GLN ALA SER ILE SEQRES 23 A 330 THR GLY SER GLN PHE HIS GLY ARG TYR GLU ARG ASP GLY SEQRES 24 A 330 GLU ARG ILE ARG PRO PHE ILE THR GLY ARG ALA HIS MET SEQRES 25 A 330 THR ALA ASP SER THR LEU LEU ILE ASP GLU GLN ASP PRO SEQRES 26 A 330 PHE ALA TRP GLY ILE HET CIT A 401 18 HET CIT A 402 18 HETNAM CIT CITRIC ACID FORMUL 2 CIT 2(C6 H8 O7) FORMUL 4 HOH *439(H2 O) HELIX 1 1 SER A 30 HIS A 42 1 13 HELIX 2 2 HIS A 42 LEU A 51 1 10 HELIX 3 3 CYS A 88 LEU A 102 1 15 HELIX 4 4 GLU A 175 ASP A 177 5 3 HELIX 5 5 ASN A 178 GLN A 196 1 19 HELIX 6 6 GLY A 200 ALA A 204 5 5 HELIX 7 7 CYS A 236 ASP A 250 1 15 SHEET 1 A 6 TYR A 137 VAL A 147 0 SHEET 2 A 6 GLY A 151 TRP A 159 -1 O GLY A 155 N VAL A 143 SHEET 3 A 6 TRP A 163 VAL A 167 -1 O LEU A 166 N ASP A 156 SHEET 4 A 6 HIS A 208 ASP A 215 1 O GLU A 210 N PHE A 165 SHEET 5 A 6 ALA A 218 CYS A 226 -1 O MET A 225 N VAL A 209 SHEET 6 A 6 ALA A 230 TYR A 231 -1 O ALA A 230 N CYS A 226 SHEET 1 B16 TYR A 137 VAL A 147 0 SHEET 2 B16 GLY A 151 TRP A 159 -1 O GLY A 155 N VAL A 143 SHEET 3 B16 TRP A 163 VAL A 167 -1 O LEU A 166 N ASP A 156 SHEET 4 B16 HIS A 208 ASP A 215 1 O GLU A 210 N PHE A 165 SHEET 5 B16 ALA A 218 CYS A 226 -1 O MET A 225 N VAL A 209 SHEET 6 B16 TRP A 259 ALA A 262 1 O ALA A 262 N SER A 220 SHEET 7 B16 GLN A 268 ASP A 276 -1 O GLY A 271 N TRP A 259 SHEET 8 B16 ARG A 279 GLY A 286 -1 O THR A 285 N HIS A 270 SHEET 9 B16 ILE A 129 ALA A 132 -1 N VAL A 131 O ILE A 284 SHEET 10 B16 GLY A 117 LEU A 123 -1 N THR A 122 O THR A 130 SHEET 11 B16 GLY A 108 THR A 114 -1 N HIS A 110 O ALA A 121 SHEET 12 B16 CYS A 74 PHE A 79 1 N CYS A 74 O ASP A 113 SHEET 13 B16 VAL A 60 CYS A 65 -1 N GLY A 61 O PHE A 79 SHEET 14 B16 GLU A 14 LYS A 21 1 N VAL A 19 O ALA A 62 SHEET 15 B16 LYS A 2 THR A 11 -1 N HIS A 5 O MET A 20 SHEET 16 B16 ALA A 288 ILE A 298 -1 O THR A 291 N ASP A 8 CISPEP 1 GLU A 52 PRO A 53 0 4.23 SITE 1 AC1 15 CYS A 88 GLY A 89 HIS A 90 ASN A 162 SITE 2 AC1 15 GLY A 237 THR A 238 HOH A 518 HOH A 546 SITE 3 AC1 15 HOH A 591 HOH A 594 HOH A 623 HOH A 633 SITE 4 AC1 15 HOH A 717 HOH A 837 HOH A 935 SITE 1 AC2 9 TYR A 139 ARG A 140 GLN A 141 ARG A 272 SITE 2 AC2 9 GLU A 274 PHE A 283 HOH A 511 HOH A 529 SITE 3 AC2 9 HOH A 593 CRYST1 44.529 54.166 142.656 90.00 96.57 90.00 I 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022457 0.000000 0.002588 0.00000 SCALE2 0.000000 0.018462 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007056 0.00000