data_4JCG # _entry.id 4JCG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4JCG pdb_00004jcg 10.2210/pdb4jcg/pdb RCSB RCSB077871 ? ? WWPDB D_1000077871 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-08-14 2 'Structure model' 1 1 2013-10-16 3 'Structure model' 1 2 2013-10-23 4 'Structure model' 1 3 2023-09-20 5 'Structure model' 1 4 2024-10-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_conn_type 7 4 'Structure model' struct_site 8 5 'Structure model' pdbx_entry_details 9 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.conn_type_id' 4 4 'Structure model' '_struct_conn.id' 5 4 'Structure model' '_struct_conn.pdbx_dist_value' 6 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 8 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 10 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 11 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 12 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 13 4 'Structure model' '_struct_conn_type.id' 14 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 15 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 16 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4JCG _pdbx_database_status.recvd_initial_deposition_date 2013-02-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wedekind, J.E.' 1 'Can, M.' 2 'Krucinska, J.' 3 'Bren, K.L.' 4 # _citation.id primary _citation.title 'Structural Characterization of Nitrosomonas europaea Cytochrome c-552 Variants with Marked Differences in Electronic Structure.' _citation.journal_abbrev Chembiochem _citation.journal_volume 14 _citation.page_first 1828 _citation.page_last 1838 _citation.year 2013 _citation.journal_id_ASTM ? _citation.country GE _citation.journal_id_ISSN 1439-4227 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23908017 _citation.pdbx_database_id_DOI 10.1002/cbic.201300118 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Can, M.' 1 ? primary 'Krucinska, J.' 2 ? primary 'Zoppellaro, G.' 3 ? primary 'Andersen, N.H.' 4 ? primary 'Wedekind, J.E.' 5 ? primary 'Hersleth, H.P.' 6 ? primary 'Andersson, K.K.' 7 ? primary 'Bren, K.L.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cytochrome c-552' 8491.702 1 ? ? 'Cyt C552 (UNP Residues 23-103)' ? 2 non-polymer syn 'HEME C' 618.503 1 ? ? ? ? 3 water nat water 18.015 138 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Cytochrome c-551, Cytochrome c552' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DADLAKKNNCIACHQVETKVVGPALKDIAAKYADKDDAATYLAGKIKGGSSGVWGQIPMPPNVNVSDADAKALADWILTL K ; _entity_poly.pdbx_seq_one_letter_code_can ;DADLAKKNNCIACHQVETKVVGPALKDIAAKYADKDDAATYLAGKIKGGSSGVWGQIPMPPNVNVSDADAKALADWILTL K ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'HEME C' HEC 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 ALA n 1 3 ASP n 1 4 LEU n 1 5 ALA n 1 6 LYS n 1 7 LYS n 1 8 ASN n 1 9 ASN n 1 10 CYS n 1 11 ILE n 1 12 ALA n 1 13 CYS n 1 14 HIS n 1 15 GLN n 1 16 VAL n 1 17 GLU n 1 18 THR n 1 19 LYS n 1 20 VAL n 1 21 VAL n 1 22 GLY n 1 23 PRO n 1 24 ALA n 1 25 LEU n 1 26 LYS n 1 27 ASP n 1 28 ILE n 1 29 ALA n 1 30 ALA n 1 31 LYS n 1 32 TYR n 1 33 ALA n 1 34 ASP n 1 35 LYS n 1 36 ASP n 1 37 ASP n 1 38 ALA n 1 39 ALA n 1 40 THR n 1 41 TYR n 1 42 LEU n 1 43 ALA n 1 44 GLY n 1 45 LYS n 1 46 ILE n 1 47 LYS n 1 48 GLY n 1 49 GLY n 1 50 SER n 1 51 SER n 1 52 GLY n 1 53 VAL n 1 54 TRP n 1 55 GLY n 1 56 GLN n 1 57 ILE n 1 58 PRO n 1 59 MET n 1 60 PRO n 1 61 PRO n 1 62 ASN n 1 63 VAL n 1 64 ASN n 1 65 VAL n 1 66 SER n 1 67 ASP n 1 68 ALA n 1 69 ASP n 1 70 ALA n 1 71 LYS n 1 72 ALA n 1 73 LEU n 1 74 ALA n 1 75 ASP n 1 76 TRP n 1 77 ILE n 1 78 LEU n 1 79 THR n 1 80 LEU n 1 81 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'cyt, cyt_c552, NE0102' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 19718 / NBRC 14298' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Nitrosomonas europaea ATCC 19718' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 228410 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pSNEC, pEC86' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEC non-polymer . 'HEME C' ? 'C34 H34 Fe N4 O4' 618.503 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 1 ASP ASP A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 ASP 3 3 3 ASP ASP A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 ASN 8 8 8 ASN ASN A . n A 1 9 ASN 9 9 9 ASN ASN A . n A 1 10 CYS 10 10 10 CYS CYS A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 CYS 13 13 13 CYS CYS A . n A 1 14 HIS 14 14 14 HIS HIS A . n A 1 15 GLN 15 15 15 GLN GLN A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 VAL 21 21 21 VAL VAL A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 PRO 23 23 23 PRO PRO A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 ILE 28 28 28 ILE ILE A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 TYR 41 41 41 TYR TYR A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 TRP 54 54 54 TRP TRP A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 GLN 56 56 56 GLN GLN A . n A 1 57 ILE 57 57 57 ILE ILE A . n A 1 58 PRO 58 58 58 PRO PRO A . n A 1 59 MET 59 59 59 MET MET A . n A 1 60 PRO 60 60 60 PRO PRO A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 ASN 64 64 64 ASN ASN A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 ASP 69 69 69 ASP ASP A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 TRP 76 76 76 TRP TRP A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 LYS 81 81 81 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEC 1 101 1 HEC HEC A . C 3 HOH 1 201 1 HOH HOH A . C 3 HOH 2 202 2 HOH HOH A . C 3 HOH 3 203 3 HOH HOH A . C 3 HOH 4 204 4 HOH HOH A . C 3 HOH 5 205 5 HOH HOH A . C 3 HOH 6 206 6 HOH HOH A . C 3 HOH 7 207 7 HOH HOH A . C 3 HOH 8 208 8 HOH HOH A . C 3 HOH 9 209 9 HOH HOH A . C 3 HOH 10 210 10 HOH HOH A . C 3 HOH 11 211 11 HOH HOH A . C 3 HOH 12 212 12 HOH HOH A . C 3 HOH 13 213 13 HOH HOH A . C 3 HOH 14 214 14 HOH HOH A . C 3 HOH 15 215 15 HOH HOH A . C 3 HOH 16 216 16 HOH HOH A . C 3 HOH 17 217 17 HOH HOH A . C 3 HOH 18 218 18 HOH HOH A . C 3 HOH 19 219 19 HOH HOH A . C 3 HOH 20 220 20 HOH HOH A . C 3 HOH 21 221 21 HOH HOH A . C 3 HOH 22 222 22 HOH HOH A . C 3 HOH 23 223 23 HOH HOH A . C 3 HOH 24 224 24 HOH HOH A . C 3 HOH 25 225 25 HOH HOH A . C 3 HOH 26 226 26 HOH HOH A . C 3 HOH 27 227 27 HOH HOH A . C 3 HOH 28 228 28 HOH HOH A . C 3 HOH 29 229 29 HOH HOH A . C 3 HOH 30 230 30 HOH HOH A . C 3 HOH 31 231 31 HOH HOH A . C 3 HOH 32 232 32 HOH HOH A . C 3 HOH 33 233 33 HOH HOH A . C 3 HOH 34 234 34 HOH HOH A . C 3 HOH 35 235 35 HOH HOH A . C 3 HOH 36 236 36 HOH HOH A . C 3 HOH 37 237 37 HOH HOH A . C 3 HOH 38 238 38 HOH HOH A . C 3 HOH 39 239 39 HOH HOH A . C 3 HOH 40 240 40 HOH HOH A . C 3 HOH 41 241 41 HOH HOH A . C 3 HOH 42 242 42 HOH HOH A . C 3 HOH 43 243 43 HOH HOH A . C 3 HOH 44 244 44 HOH HOH A . C 3 HOH 45 245 45 HOH HOH A . C 3 HOH 46 246 46 HOH HOH A . C 3 HOH 47 247 47 HOH HOH A . C 3 HOH 48 248 48 HOH HOH A . C 3 HOH 49 249 49 HOH HOH A . C 3 HOH 50 250 50 HOH HOH A . C 3 HOH 51 251 51 HOH HOH A . C 3 HOH 52 252 52 HOH HOH A . C 3 HOH 53 253 53 HOH HOH A . C 3 HOH 54 254 55 HOH HOH A . C 3 HOH 55 255 56 HOH HOH A . C 3 HOH 56 256 57 HOH HOH A . C 3 HOH 57 257 58 HOH HOH A . C 3 HOH 58 258 59 HOH HOH A . C 3 HOH 59 259 60 HOH HOH A . C 3 HOH 60 260 61 HOH HOH A . C 3 HOH 61 261 63 HOH HOH A . C 3 HOH 62 262 64 HOH HOH A . C 3 HOH 63 263 65 HOH HOH A . C 3 HOH 64 264 66 HOH HOH A . C 3 HOH 65 265 67 HOH HOH A . C 3 HOH 66 266 68 HOH HOH A . C 3 HOH 67 267 69 HOH HOH A . C 3 HOH 68 268 70 HOH HOH A . C 3 HOH 69 269 72 HOH HOH A . C 3 HOH 70 270 73 HOH HOH A . C 3 HOH 71 271 74 HOH HOH A . C 3 HOH 72 272 75 HOH HOH A . C 3 HOH 73 273 76 HOH HOH A . C 3 HOH 74 274 77 HOH HOH A . C 3 HOH 75 275 78 HOH HOH A . C 3 HOH 76 276 79 HOH HOH A . C 3 HOH 77 277 80 HOH HOH A . C 3 HOH 78 278 81 HOH HOH A . C 3 HOH 79 279 82 HOH HOH A . C 3 HOH 80 280 83 HOH HOH A . C 3 HOH 81 281 84 HOH HOH A . C 3 HOH 82 282 85 HOH HOH A . C 3 HOH 83 283 86 HOH HOH A . C 3 HOH 84 284 87 HOH HOH A . C 3 HOH 85 285 90 HOH HOH A . C 3 HOH 86 286 91 HOH HOH A . C 3 HOH 87 287 92 HOH HOH A . C 3 HOH 88 288 93 HOH HOH A . C 3 HOH 89 289 95 HOH HOH A . C 3 HOH 90 290 96 HOH HOH A . C 3 HOH 91 291 97 HOH HOH A . C 3 HOH 92 292 98 HOH HOH A . C 3 HOH 93 293 99 HOH HOH A . C 3 HOH 94 294 100 HOH HOH A . C 3 HOH 95 295 101 HOH HOH A . C 3 HOH 96 296 102 HOH HOH A . C 3 HOH 97 297 103 HOH HOH A . C 3 HOH 98 298 104 HOH HOH A . C 3 HOH 99 299 105 HOH HOH A . C 3 HOH 100 300 106 HOH HOH A . C 3 HOH 101 301 107 HOH HOH A . C 3 HOH 102 302 108 HOH HOH A . C 3 HOH 103 303 109 HOH HOH A . C 3 HOH 104 304 110 HOH HOH A . C 3 HOH 105 305 111 HOH HOH A . C 3 HOH 106 306 112 HOH HOH A . C 3 HOH 107 307 113 HOH HOH A . C 3 HOH 108 308 114 HOH HOH A . C 3 HOH 109 309 115 HOH HOH A . C 3 HOH 110 310 116 HOH HOH A . C 3 HOH 111 311 118 HOH HOH A . C 3 HOH 112 312 119 HOH HOH A . C 3 HOH 113 313 122 HOH HOH A . C 3 HOH 114 314 123 HOH HOH A . C 3 HOH 115 315 124 HOH HOH A . C 3 HOH 116 316 125 HOH HOH A . C 3 HOH 117 317 126 HOH HOH A . C 3 HOH 118 318 127 HOH HOH A . C 3 HOH 119 319 129 HOH HOH A . C 3 HOH 120 320 130 HOH HOH A . C 3 HOH 121 321 132 HOH HOH A . C 3 HOH 122 322 133 HOH HOH A . C 3 HOH 123 323 134 HOH HOH A . C 3 HOH 124 324 135 HOH HOH A . C 3 HOH 125 325 136 HOH HOH A . C 3 HOH 126 326 137 HOH HOH A . C 3 HOH 127 327 138 HOH HOH A . C 3 HOH 128 328 140 HOH HOH A . C 3 HOH 129 329 141 HOH HOH A . C 3 HOH 130 330 142 HOH HOH A . C 3 HOH 131 331 143 HOH HOH A . C 3 HOH 132 332 144 HOH HOH A . C 3 HOH 133 333 145 HOH HOH A . C 3 HOH 134 334 146 HOH HOH A . C 3 HOH 135 335 147 HOH HOH A . C 3 HOH 136 336 148 HOH HOH A . C 3 HOH 137 337 149 HOH HOH A . C 3 HOH 138 338 150 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.8.1_1168)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 4JCG _cell.length_a 60.358 _cell.length_b 60.358 _cell.length_c 109.133 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4JCG _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4JCG _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.38 _exptl_crystal.density_percent_sol 63.60 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.4 _exptl_crystal_grow.pdbx_details ;19% (w/v) PEG 6000, 0.2 M LiCl, 0.1 M Tris-HCl pH 7.4 at 7-8 mM protein concentration., VAPOR DIFFUSION, HANGING DROP, temperature 277K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 270' _diffrn_detector.pdbx_collection_date 2008 _diffrn_detector.details 'Rh coated Si mirrors; capillary microfocus' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Horizontal bent Si(111), asymmetrically cut with water cooled Cu Block' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CHESS BEAMLINE F1' _diffrn_source.pdbx_synchrotron_site CHESS _diffrn_source.pdbx_synchrotron_beamline F1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.918 # _reflns.entry_id 4JCG _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 26.409 _reflns.d_resolution_high 1.63 _reflns.number_obs 27203 _reflns.number_all ? _reflns.percent_possible_obs 98.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.040 _reflns.pdbx_netI_over_sigmaI 37.8 _reflns.B_iso_Wilson_estimate 22.7 _reflns.pdbx_redundancy 6.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 4JCG _refine.ls_number_reflns_obs 27203 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I -3 _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 26.409 _refine.ls_d_res_high 1.630 _refine.ls_percent_reflns_obs 97.97 _refine.ls_R_factor_obs 0.1998 _refine.ls_R_factor_all 0.1998 _refine.ls_R_factor_R_work 0.1980 _refine.ls_R_factor_R_free 0.2344 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.02 _refine.ls_number_reflns_R_free 1365 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.00 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.60 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB entry 351C' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.16 _refine.pdbx_overall_phase_error 22.61 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4JCG _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs 0.16 _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 595 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 43 _refine_hist.number_atoms_solvent 138 _refine_hist.number_atoms_total 776 _refine_hist.d_res_high 1.630 _refine_hist.d_res_low 26.409 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.016 ? ? 672 ? 'X-RAY DIFFRACTION' f_angle_d 1.630 ? ? 930 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 14.563 ? ? 236 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.097 ? ? 97 ? 'X-RAY DIFFRACTION' f_plane_restr 0.009 ? ? 116 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.6300 1.6882 2179 0.2505 83.00 0.2996 . . 126 . . . . 'X-RAY DIFFRACTION' . 1.6882 1.7558 2589 0.2341 99.00 0.2390 . . 138 . . . . 'X-RAY DIFFRACTION' . 1.7558 1.8357 2644 0.2406 100.00 0.2531 . . 143 . . . . 'X-RAY DIFFRACTION' . 1.8357 1.9324 2628 0.2163 100.00 0.2340 . . 138 . . . . 'X-RAY DIFFRACTION' . 1.9324 2.0535 2635 0.2168 100.00 0.2614 . . 136 . . . . 'X-RAY DIFFRACTION' . 2.0535 2.2119 2631 0.1976 100.00 0.2381 . . 137 . . . . 'X-RAY DIFFRACTION' . 2.2119 2.4344 2656 0.2089 100.00 0.2282 . . 140 . . . . 'X-RAY DIFFRACTION' . 2.4344 2.7863 2620 0.2048 100.00 0.2925 . . 136 . . . . 'X-RAY DIFFRACTION' . 2.7863 3.5092 2656 0.1884 100.00 0.2072 . . 136 . . . . 'X-RAY DIFFRACTION' . 3.5092 26.4125 2600 0.1781 98.00 0.2191 . . 135 . . . . 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4JCG _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4JCG _struct.title 'Recombinant wild type Nitrosomonas europaea cytochrome c552' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4JCG _struct_keywords.pdbx_keywords 'ELECTRON TRANSPORT' _struct_keywords.text 'cytC domain, electron transport, heme' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CY552_NITEU _struct_ref.pdbx_db_accession P95339 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DADLAKKNNCIACHQVETKVVGPALKDIAAKYADKDDAATYLAGKIKGGSSGVWGQIPMPPNVNVSDADAKALADWILTL K ; _struct_ref.pdbx_align_begin 23 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4JCG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 81 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P95339 _struct_ref_seq.db_align_beg 23 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 103 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 81 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 1 ? ASN A 8 ? ASP A 1 ASN A 8 1 ? 8 HELX_P HELX_P2 2 ALA A 24 ? TYR A 32 ? ALA A 24 TYR A 32 1 ? 9 HELX_P HELX_P3 3 ASP A 37 ? GLY A 49 ? ASP A 37 GLY A 49 1 ? 13 HELX_P HELX_P4 4 SER A 66 ? LEU A 80 ? SER A 66 LEU A 80 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale none ? A CYS 10 SG ? ? ? 1_555 B HEC . CAB ? ? A CYS 10 A HEC 101 1_555 ? ? ? ? ? ? ? 1.776 ? ? covale2 covale none ? A CYS 13 SG ? ? ? 1_555 B HEC . CAC ? ? A CYS 13 A HEC 101 1_555 ? ? ? ? ? ? ? 1.884 ? ? metalc1 metalc ? ? A HIS 14 NE2 ? ? ? 1_555 B HEC . FE ? ? A HIS 14 A HEC 101 1_555 ? ? ? ? ? ? ? 2.147 ? ? metalc2 metalc ? ? A MET 59 SD ? ? ? 1_555 B HEC . FE ? ? A MET 59 A HEC 101 1_555 ? ? ? ? ? ? ? 2.383 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 14 ? A HIS 14 ? 1_555 FE ? B HEC . ? A HEC 101 ? 1_555 NA ? B HEC . ? A HEC 101 ? 1_555 89.9 ? 2 NE2 ? A HIS 14 ? A HIS 14 ? 1_555 FE ? B HEC . ? A HEC 101 ? 1_555 NB ? B HEC . ? A HEC 101 ? 1_555 90.3 ? 3 NA ? B HEC . ? A HEC 101 ? 1_555 FE ? B HEC . ? A HEC 101 ? 1_555 NB ? B HEC . ? A HEC 101 ? 1_555 90.1 ? 4 NE2 ? A HIS 14 ? A HIS 14 ? 1_555 FE ? B HEC . ? A HEC 101 ? 1_555 NC ? B HEC . ? A HEC 101 ? 1_555 82.1 ? 5 NA ? B HEC . ? A HEC 101 ? 1_555 FE ? B HEC . ? A HEC 101 ? 1_555 NC ? B HEC . ? A HEC 101 ? 1_555 171.4 ? 6 NB ? B HEC . ? A HEC 101 ? 1_555 FE ? B HEC . ? A HEC 101 ? 1_555 NC ? B HEC . ? A HEC 101 ? 1_555 87.0 ? 7 NE2 ? A HIS 14 ? A HIS 14 ? 1_555 FE ? B HEC . ? A HEC 101 ? 1_555 ND ? B HEC . ? A HEC 101 ? 1_555 86.1 ? 8 NA ? B HEC . ? A HEC 101 ? 1_555 FE ? B HEC . ? A HEC 101 ? 1_555 ND ? B HEC . ? A HEC 101 ? 1_555 89.7 ? 9 NB ? B HEC . ? A HEC 101 ? 1_555 FE ? B HEC . ? A HEC 101 ? 1_555 ND ? B HEC . ? A HEC 101 ? 1_555 176.4 ? 10 NC ? B HEC . ? A HEC 101 ? 1_555 FE ? B HEC . ? A HEC 101 ? 1_555 ND ? B HEC . ? A HEC 101 ? 1_555 92.8 ? 11 NE2 ? A HIS 14 ? A HIS 14 ? 1_555 FE ? B HEC . ? A HEC 101 ? 1_555 SD ? A MET 59 ? A MET 59 ? 1_555 175.9 ? 12 NA ? B HEC . ? A HEC 101 ? 1_555 FE ? B HEC . ? A HEC 101 ? 1_555 SD ? A MET 59 ? A MET 59 ? 1_555 91.0 ? 13 NB ? B HEC . ? A HEC 101 ? 1_555 FE ? B HEC . ? A HEC 101 ? 1_555 SD ? A MET 59 ? A MET 59 ? 1_555 85.7 ? 14 NC ? B HEC . ? A HEC 101 ? 1_555 FE ? B HEC . ? A HEC 101 ? 1_555 SD ? A MET 59 ? A MET 59 ? 1_555 96.8 ? 15 ND ? B HEC . ? A HEC 101 ? 1_555 FE ? B HEC . ? A HEC 101 ? 1_555 SD ? A MET 59 ? A MET 59 ? 1_555 98.0 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 HEC B . ? CYS A 10 ? HEC A 101 ? 1_555 CYS A 10 ? 1_555 CAB SG CYS 2 HEC None Heme/heme-like 2 HEC B . ? CYS A 13 ? HEC A 101 ? 1_555 CYS A 13 ? 1_555 CAC SG CYS 3 HEC None Heme/heme-like # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id HEC _struct_site.pdbx_auth_seq_id 101 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 21 _struct_site.details 'BINDING SITE FOR RESIDUE HEC A 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 21 ASN A 8 ? ASN A 8 . ? 1_555 ? 2 AC1 21 ASN A 9 ? ASN A 9 . ? 1_555 ? 3 AC1 21 CYS A 10 ? CYS A 10 . ? 1_555 ? 4 AC1 21 CYS A 13 ? CYS A 13 . ? 1_555 ? 5 AC1 21 HIS A 14 ? HIS A 14 . ? 1_555 ? 6 AC1 21 GLY A 22 ? GLY A 22 . ? 1_555 ? 7 AC1 21 PRO A 23 ? PRO A 23 . ? 1_555 ? 8 AC1 21 TYR A 32 ? TYR A 32 . ? 1_555 ? 9 AC1 21 TYR A 41 ? TYR A 41 . ? 1_555 ? 10 AC1 21 LYS A 45 ? LYS A 45 . ? 1_555 ? 11 AC1 21 ILE A 46 ? ILE A 46 . ? 1_555 ? 12 AC1 21 SER A 50 ? SER A 50 . ? 1_555 ? 13 AC1 21 SER A 51 ? SER A 51 . ? 1_555 ? 14 AC1 21 GLY A 52 ? GLY A 52 . ? 1_555 ? 15 AC1 21 VAL A 53 ? VAL A 53 . ? 1_555 ? 16 AC1 21 TRP A 54 ? TRP A 54 . ? 1_555 ? 17 AC1 21 GLY A 55 ? GLY A 55 . ? 1_555 ? 18 AC1 21 ILE A 57 ? ILE A 57 . ? 1_555 ? 19 AC1 21 MET A 59 ? MET A 59 . ? 1_555 ? 20 AC1 21 ASN A 62 ? ASN A 62 . ? 1_555 ? 21 AC1 21 HOH C . ? HOH A 274 . ? 1_555 ? # _pdbx_entry_details.entry_id 4JCG _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 20 ? ? -116.59 -92.56 2 1 ASP A 37 ? ? -93.84 30.71 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 229 ? C HOH . 2 1 A HOH 300 ? C HOH . # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -21.2426 -22.3489 -3.0711 0.1912 0.7086 0.4567 -0.0059 0.0213 -0.0899 6.6955 9.1161 3.8779 0.3691 3.5330 -1.3974 -0.0687 0.9710 -0.2199 -0.2649 0.1433 1.0267 0.1197 -0.6886 -0.0708 'X-RAY DIFFRACTION' 2 ? refined -10.5436 -25.0040 -10.1188 0.3157 0.7798 0.3793 0.0495 0.0801 -0.1541 3.8617 1.8799 2.9882 -2.3454 -3.1138 1.4241 0.1185 1.6351 -0.6254 -0.4181 -0.4880 0.4325 0.0923 -1.1265 0.3195 'X-RAY DIFFRACTION' 3 ? refined 0.1818 -29.7325 3.4508 0.5250 0.5406 0.5382 0.2243 0.2084 0.1843 6.8113 6.3108 5.9118 -3.0009 0.6076 2.0453 -0.7957 -1.3983 -0.9508 1.1484 0.4251 -0.1064 1.1578 0.6572 0.1415 'X-RAY DIFFRACTION' 4 ? refined -5.4014 -16.8614 -2.9527 0.2240 0.2389 0.2568 0.0443 0.1143 0.0434 2.4712 0.1442 2.9308 -0.4022 -2.5064 0.5831 0.3759 0.1500 0.4414 -0.1421 -0.1618 -0.1579 -0.4862 0.0822 -0.2280 'X-RAY DIFFRACTION' 5 ? refined -12.4125 -26.2735 1.3839 0.2019 0.2594 0.3945 -0.0432 0.1429 -0.0696 3.5279 6.6939 6.2246 -3.7807 -0.1633 1.4486 -0.2875 0.3877 -1.0634 0.0837 -0.1025 0.4118 0.4732 -0.1860 0.3212 'X-RAY DIFFRACTION' 6 ? refined -7.4955 -18.8007 -6.9129 0.2089 0.4116 0.2054 0.1232 0.0724 0.0712 0.1204 0.6416 0.6249 0.2711 0.0740 0.3011 0.2477 0.7954 0.5206 -0.2894 -0.2445 -0.2545 -0.3075 -0.4984 0.0091 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 1:7) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 8:31) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 32:37) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 38:66) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 67:81) ; 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 101:101 ; # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ASN N N N N 14 ASN CA C N S 15 ASN C C N N 16 ASN O O N N 17 ASN CB C N N 18 ASN CG C N N 19 ASN OD1 O N N 20 ASN ND2 N N N 21 ASN OXT O N N 22 ASN H H N N 23 ASN H2 H N N 24 ASN HA H N N 25 ASN HB2 H N N 26 ASN HB3 H N N 27 ASN HD21 H N N 28 ASN HD22 H N N 29 ASN HXT H N N 30 ASP N N N N 31 ASP CA C N S 32 ASP C C N N 33 ASP O O N N 34 ASP CB C N N 35 ASP CG C N N 36 ASP OD1 O N N 37 ASP OD2 O N N 38 ASP OXT O N N 39 ASP H H N N 40 ASP H2 H N N 41 ASP HA H N N 42 ASP HB2 H N N 43 ASP HB3 H N N 44 ASP HD2 H N N 45 ASP HXT H N N 46 CYS N N N N 47 CYS CA C N R 48 CYS C C N N 49 CYS O O N N 50 CYS CB C N N 51 CYS SG S N N 52 CYS OXT O N N 53 CYS H H N N 54 CYS H2 H N N 55 CYS HA H N N 56 CYS HB2 H N N 57 CYS HB3 H N N 58 CYS HG H N N 59 CYS HXT H N N 60 GLN N N N N 61 GLN CA C N S 62 GLN C C N N 63 GLN O O N N 64 GLN CB C N N 65 GLN CG C N N 66 GLN CD C N N 67 GLN OE1 O N N 68 GLN NE2 N N N 69 GLN OXT O N N 70 GLN H H N N 71 GLN H2 H N N 72 GLN HA H N N 73 GLN HB2 H N N 74 GLN HB3 H N N 75 GLN HG2 H N N 76 GLN HG3 H N N 77 GLN HE21 H N N 78 GLN HE22 H N N 79 GLN HXT H N N 80 GLU N N N N 81 GLU CA C N S 82 GLU C C N N 83 GLU O O N N 84 GLU CB C N N 85 GLU CG C N N 86 GLU CD C N N 87 GLU OE1 O N N 88 GLU OE2 O N N 89 GLU OXT O N N 90 GLU H H N N 91 GLU H2 H N N 92 GLU HA H N N 93 GLU HB2 H N N 94 GLU HB3 H N N 95 GLU HG2 H N N 96 GLU HG3 H N N 97 GLU HE2 H N N 98 GLU HXT H N N 99 GLY N N N N 100 GLY CA C N N 101 GLY C C N N 102 GLY O O N N 103 GLY OXT O N N 104 GLY H H N N 105 GLY H2 H N N 106 GLY HA2 H N N 107 GLY HA3 H N N 108 GLY HXT H N N 109 HEC FE FE N N 110 HEC CHA C N N 111 HEC CHB C N N 112 HEC CHC C N N 113 HEC CHD C N N 114 HEC NA N Y N 115 HEC C1A C Y N 116 HEC C2A C Y N 117 HEC C3A C Y N 118 HEC C4A C Y N 119 HEC CMA C N N 120 HEC CAA C N N 121 HEC CBA C N N 122 HEC CGA C N N 123 HEC O1A O N N 124 HEC O2A O N N 125 HEC NB N Y N 126 HEC C1B C Y N 127 HEC C2B C Y N 128 HEC C3B C Y N 129 HEC C4B C Y N 130 HEC CMB C N N 131 HEC CAB C N N 132 HEC CBB C N N 133 HEC NC N Y N 134 HEC C1C C Y N 135 HEC C2C C Y N 136 HEC C3C C Y N 137 HEC C4C C Y N 138 HEC CMC C N N 139 HEC CAC C N N 140 HEC CBC C N N 141 HEC ND N Y N 142 HEC C1D C Y N 143 HEC C2D C Y N 144 HEC C3D C Y N 145 HEC C4D C Y N 146 HEC CMD C N N 147 HEC CAD C N N 148 HEC CBD C N N 149 HEC CGD C N N 150 HEC O1D O N N 151 HEC O2D O N N 152 HEC HHA H N N 153 HEC HHB H N N 154 HEC HHC H N N 155 HEC HHD H N N 156 HEC HMA1 H N N 157 HEC HMA2 H N N 158 HEC HMA3 H N N 159 HEC HAA1 H N N 160 HEC HAA2 H N N 161 HEC HBA1 H N N 162 HEC HBA2 H N N 163 HEC H2A H N N 164 HEC HMB1 H N N 165 HEC HMB2 H N N 166 HEC HMB3 H N N 167 HEC HAB H N N 168 HEC HBB1 H N N 169 HEC HBB2 H N N 170 HEC HBB3 H N N 171 HEC HMC1 H N N 172 HEC HMC2 H N N 173 HEC HMC3 H N N 174 HEC HAC H N N 175 HEC HBC1 H N N 176 HEC HBC2 H N N 177 HEC HBC3 H N N 178 HEC HMD1 H N N 179 HEC HMD2 H N N 180 HEC HMD3 H N N 181 HEC HAD1 H N N 182 HEC HAD2 H N N 183 HEC HBD1 H N N 184 HEC HBD2 H N N 185 HEC H2D H N N 186 HIS N N N N 187 HIS CA C N S 188 HIS C C N N 189 HIS O O N N 190 HIS CB C N N 191 HIS CG C Y N 192 HIS ND1 N Y N 193 HIS CD2 C Y N 194 HIS CE1 C Y N 195 HIS NE2 N Y N 196 HIS OXT O N N 197 HIS H H N N 198 HIS H2 H N N 199 HIS HA H N N 200 HIS HB2 H N N 201 HIS HB3 H N N 202 HIS HD1 H N N 203 HIS HD2 H N N 204 HIS HE1 H N N 205 HIS HE2 H N N 206 HIS HXT H N N 207 HOH O O N N 208 HOH H1 H N N 209 HOH H2 H N N 210 ILE N N N N 211 ILE CA C N S 212 ILE C C N N 213 ILE O O N N 214 ILE CB C N S 215 ILE CG1 C N N 216 ILE CG2 C N N 217 ILE CD1 C N N 218 ILE OXT O N N 219 ILE H H N N 220 ILE H2 H N N 221 ILE HA H N N 222 ILE HB H N N 223 ILE HG12 H N N 224 ILE HG13 H N N 225 ILE HG21 H N N 226 ILE HG22 H N N 227 ILE HG23 H N N 228 ILE HD11 H N N 229 ILE HD12 H N N 230 ILE HD13 H N N 231 ILE HXT H N N 232 LEU N N N N 233 LEU CA C N S 234 LEU C C N N 235 LEU O O N N 236 LEU CB C N N 237 LEU CG C N N 238 LEU CD1 C N N 239 LEU CD2 C N N 240 LEU OXT O N N 241 LEU H H N N 242 LEU H2 H N N 243 LEU HA H N N 244 LEU HB2 H N N 245 LEU HB3 H N N 246 LEU HG H N N 247 LEU HD11 H N N 248 LEU HD12 H N N 249 LEU HD13 H N N 250 LEU HD21 H N N 251 LEU HD22 H N N 252 LEU HD23 H N N 253 LEU HXT H N N 254 LYS N N N N 255 LYS CA C N S 256 LYS C C N N 257 LYS O O N N 258 LYS CB C N N 259 LYS CG C N N 260 LYS CD C N N 261 LYS CE C N N 262 LYS NZ N N N 263 LYS OXT O N N 264 LYS H H N N 265 LYS H2 H N N 266 LYS HA H N N 267 LYS HB2 H N N 268 LYS HB3 H N N 269 LYS HG2 H N N 270 LYS HG3 H N N 271 LYS HD2 H N N 272 LYS HD3 H N N 273 LYS HE2 H N N 274 LYS HE3 H N N 275 LYS HZ1 H N N 276 LYS HZ2 H N N 277 LYS HZ3 H N N 278 LYS HXT H N N 279 MET N N N N 280 MET CA C N S 281 MET C C N N 282 MET O O N N 283 MET CB C N N 284 MET CG C N N 285 MET SD S N N 286 MET CE C N N 287 MET OXT O N N 288 MET H H N N 289 MET H2 H N N 290 MET HA H N N 291 MET HB2 H N N 292 MET HB3 H N N 293 MET HG2 H N N 294 MET HG3 H N N 295 MET HE1 H N N 296 MET HE2 H N N 297 MET HE3 H N N 298 MET HXT H N N 299 PRO N N N N 300 PRO CA C N S 301 PRO C C N N 302 PRO O O N N 303 PRO CB C N N 304 PRO CG C N N 305 PRO CD C N N 306 PRO OXT O N N 307 PRO H H N N 308 PRO HA H N N 309 PRO HB2 H N N 310 PRO HB3 H N N 311 PRO HG2 H N N 312 PRO HG3 H N N 313 PRO HD2 H N N 314 PRO HD3 H N N 315 PRO HXT H N N 316 SER N N N N 317 SER CA C N S 318 SER C C N N 319 SER O O N N 320 SER CB C N N 321 SER OG O N N 322 SER OXT O N N 323 SER H H N N 324 SER H2 H N N 325 SER HA H N N 326 SER HB2 H N N 327 SER HB3 H N N 328 SER HG H N N 329 SER HXT H N N 330 THR N N N N 331 THR CA C N S 332 THR C C N N 333 THR O O N N 334 THR CB C N R 335 THR OG1 O N N 336 THR CG2 C N N 337 THR OXT O N N 338 THR H H N N 339 THR H2 H N N 340 THR HA H N N 341 THR HB H N N 342 THR HG1 H N N 343 THR HG21 H N N 344 THR HG22 H N N 345 THR HG23 H N N 346 THR HXT H N N 347 TRP N N N N 348 TRP CA C N S 349 TRP C C N N 350 TRP O O N N 351 TRP CB C N N 352 TRP CG C Y N 353 TRP CD1 C Y N 354 TRP CD2 C Y N 355 TRP NE1 N Y N 356 TRP CE2 C Y N 357 TRP CE3 C Y N 358 TRP CZ2 C Y N 359 TRP CZ3 C Y N 360 TRP CH2 C Y N 361 TRP OXT O N N 362 TRP H H N N 363 TRP H2 H N N 364 TRP HA H N N 365 TRP HB2 H N N 366 TRP HB3 H N N 367 TRP HD1 H N N 368 TRP HE1 H N N 369 TRP HE3 H N N 370 TRP HZ2 H N N 371 TRP HZ3 H N N 372 TRP HH2 H N N 373 TRP HXT H N N 374 TYR N N N N 375 TYR CA C N S 376 TYR C C N N 377 TYR O O N N 378 TYR CB C N N 379 TYR CG C Y N 380 TYR CD1 C Y N 381 TYR CD2 C Y N 382 TYR CE1 C Y N 383 TYR CE2 C Y N 384 TYR CZ C Y N 385 TYR OH O N N 386 TYR OXT O N N 387 TYR H H N N 388 TYR H2 H N N 389 TYR HA H N N 390 TYR HB2 H N N 391 TYR HB3 H N N 392 TYR HD1 H N N 393 TYR HD2 H N N 394 TYR HE1 H N N 395 TYR HE2 H N N 396 TYR HH H N N 397 TYR HXT H N N 398 VAL N N N N 399 VAL CA C N S 400 VAL C C N N 401 VAL O O N N 402 VAL CB C N N 403 VAL CG1 C N N 404 VAL CG2 C N N 405 VAL OXT O N N 406 VAL H H N N 407 VAL H2 H N N 408 VAL HA H N N 409 VAL HB H N N 410 VAL HG11 H N N 411 VAL HG12 H N N 412 VAL HG13 H N N 413 VAL HG21 H N N 414 VAL HG22 H N N 415 VAL HG23 H N N 416 VAL HXT H N N 417 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ASN N CA sing N N 13 ASN N H sing N N 14 ASN N H2 sing N N 15 ASN CA C sing N N 16 ASN CA CB sing N N 17 ASN CA HA sing N N 18 ASN C O doub N N 19 ASN C OXT sing N N 20 ASN CB CG sing N N 21 ASN CB HB2 sing N N 22 ASN CB HB3 sing N N 23 ASN CG OD1 doub N N 24 ASN CG ND2 sing N N 25 ASN ND2 HD21 sing N N 26 ASN ND2 HD22 sing N N 27 ASN OXT HXT sing N N 28 ASP N CA sing N N 29 ASP N H sing N N 30 ASP N H2 sing N N 31 ASP CA C sing N N 32 ASP CA CB sing N N 33 ASP CA HA sing N N 34 ASP C O doub N N 35 ASP C OXT sing N N 36 ASP CB CG sing N N 37 ASP CB HB2 sing N N 38 ASP CB HB3 sing N N 39 ASP CG OD1 doub N N 40 ASP CG OD2 sing N N 41 ASP OD2 HD2 sing N N 42 ASP OXT HXT sing N N 43 CYS N CA sing N N 44 CYS N H sing N N 45 CYS N H2 sing N N 46 CYS CA C sing N N 47 CYS CA CB sing N N 48 CYS CA HA sing N N 49 CYS C O doub N N 50 CYS C OXT sing N N 51 CYS CB SG sing N N 52 CYS CB HB2 sing N N 53 CYS CB HB3 sing N N 54 CYS SG HG sing N N 55 CYS OXT HXT sing N N 56 GLN N CA sing N N 57 GLN N H sing N N 58 GLN N H2 sing N N 59 GLN CA C sing N N 60 GLN CA CB sing N N 61 GLN CA HA sing N N 62 GLN C O doub N N 63 GLN C OXT sing N N 64 GLN CB CG sing N N 65 GLN CB HB2 sing N N 66 GLN CB HB3 sing N N 67 GLN CG CD sing N N 68 GLN CG HG2 sing N N 69 GLN CG HG3 sing N N 70 GLN CD OE1 doub N N 71 GLN CD NE2 sing N N 72 GLN NE2 HE21 sing N N 73 GLN NE2 HE22 sing N N 74 GLN OXT HXT sing N N 75 GLU N CA sing N N 76 GLU N H sing N N 77 GLU N H2 sing N N 78 GLU CA C sing N N 79 GLU CA CB sing N N 80 GLU CA HA sing N N 81 GLU C O doub N N 82 GLU C OXT sing N N 83 GLU CB CG sing N N 84 GLU CB HB2 sing N N 85 GLU CB HB3 sing N N 86 GLU CG CD sing N N 87 GLU CG HG2 sing N N 88 GLU CG HG3 sing N N 89 GLU CD OE1 doub N N 90 GLU CD OE2 sing N N 91 GLU OE2 HE2 sing N N 92 GLU OXT HXT sing N N 93 GLY N CA sing N N 94 GLY N H sing N N 95 GLY N H2 sing N N 96 GLY CA C sing N N 97 GLY CA HA2 sing N N 98 GLY CA HA3 sing N N 99 GLY C O doub N N 100 GLY C OXT sing N N 101 GLY OXT HXT sing N N 102 HEC FE NA sing N N 103 HEC FE NB sing N N 104 HEC FE NC sing N N 105 HEC FE ND sing N N 106 HEC CHA C1A doub N N 107 HEC CHA C4D sing N N 108 HEC CHA HHA sing N N 109 HEC CHB C4A doub N N 110 HEC CHB C1B sing N N 111 HEC CHB HHB sing N N 112 HEC CHC C4B doub N N 113 HEC CHC C1C sing N N 114 HEC CHC HHC sing N N 115 HEC CHD C4C doub N N 116 HEC CHD C1D sing N N 117 HEC CHD HHD sing N N 118 HEC NA C1A sing Y N 119 HEC NA C4A sing Y N 120 HEC C1A C2A sing Y N 121 HEC C2A C3A doub Y N 122 HEC C2A CAA sing N N 123 HEC C3A C4A sing Y N 124 HEC C3A CMA sing N N 125 HEC CMA HMA1 sing N N 126 HEC CMA HMA2 sing N N 127 HEC CMA HMA3 sing N N 128 HEC CAA CBA sing N N 129 HEC CAA HAA1 sing N N 130 HEC CAA HAA2 sing N N 131 HEC CBA CGA sing N N 132 HEC CBA HBA1 sing N N 133 HEC CBA HBA2 sing N N 134 HEC CGA O1A doub N N 135 HEC CGA O2A sing N N 136 HEC O2A H2A sing N N 137 HEC NB C1B sing Y N 138 HEC NB C4B sing Y N 139 HEC C1B C2B doub Y N 140 HEC C2B C3B sing Y N 141 HEC C2B CMB sing N N 142 HEC C3B C4B sing Y N 143 HEC C3B CAB doub N E 144 HEC CMB HMB1 sing N N 145 HEC CMB HMB2 sing N N 146 HEC CMB HMB3 sing N N 147 HEC CAB CBB sing N N 148 HEC CAB HAB sing N N 149 HEC CBB HBB1 sing N N 150 HEC CBB HBB2 sing N N 151 HEC CBB HBB3 sing N N 152 HEC NC C1C sing Y N 153 HEC NC C4C sing Y N 154 HEC C1C C2C doub Y N 155 HEC C2C C3C sing Y N 156 HEC C2C CMC sing N N 157 HEC C3C C4C sing Y N 158 HEC C3C CAC doub N E 159 HEC CMC HMC1 sing N N 160 HEC CMC HMC2 sing N N 161 HEC CMC HMC3 sing N N 162 HEC CAC CBC sing N N 163 HEC CAC HAC sing N N 164 HEC CBC HBC1 sing N N 165 HEC CBC HBC2 sing N N 166 HEC CBC HBC3 sing N N 167 HEC ND C1D sing Y N 168 HEC ND C4D sing Y N 169 HEC C1D C2D doub Y N 170 HEC C2D C3D sing Y N 171 HEC C2D CMD sing N N 172 HEC C3D C4D doub Y N 173 HEC C3D CAD sing N N 174 HEC CMD HMD1 sing N N 175 HEC CMD HMD2 sing N N 176 HEC CMD HMD3 sing N N 177 HEC CAD CBD sing N N 178 HEC CAD HAD1 sing N N 179 HEC CAD HAD2 sing N N 180 HEC CBD CGD sing N N 181 HEC CBD HBD1 sing N N 182 HEC CBD HBD2 sing N N 183 HEC CGD O1D doub N N 184 HEC CGD O2D sing N N 185 HEC O2D H2D sing N N 186 HIS N CA sing N N 187 HIS N H sing N N 188 HIS N H2 sing N N 189 HIS CA C sing N N 190 HIS CA CB sing N N 191 HIS CA HA sing N N 192 HIS C O doub N N 193 HIS C OXT sing N N 194 HIS CB CG sing N N 195 HIS CB HB2 sing N N 196 HIS CB HB3 sing N N 197 HIS CG ND1 sing Y N 198 HIS CG CD2 doub Y N 199 HIS ND1 CE1 doub Y N 200 HIS ND1 HD1 sing N N 201 HIS CD2 NE2 sing Y N 202 HIS CD2 HD2 sing N N 203 HIS CE1 NE2 sing Y N 204 HIS CE1 HE1 sing N N 205 HIS NE2 HE2 sing N N 206 HIS OXT HXT sing N N 207 HOH O H1 sing N N 208 HOH O H2 sing N N 209 ILE N CA sing N N 210 ILE N H sing N N 211 ILE N H2 sing N N 212 ILE CA C sing N N 213 ILE CA CB sing N N 214 ILE CA HA sing N N 215 ILE C O doub N N 216 ILE C OXT sing N N 217 ILE CB CG1 sing N N 218 ILE CB CG2 sing N N 219 ILE CB HB sing N N 220 ILE CG1 CD1 sing N N 221 ILE CG1 HG12 sing N N 222 ILE CG1 HG13 sing N N 223 ILE CG2 HG21 sing N N 224 ILE CG2 HG22 sing N N 225 ILE CG2 HG23 sing N N 226 ILE CD1 HD11 sing N N 227 ILE CD1 HD12 sing N N 228 ILE CD1 HD13 sing N N 229 ILE OXT HXT sing N N 230 LEU N CA sing N N 231 LEU N H sing N N 232 LEU N H2 sing N N 233 LEU CA C sing N N 234 LEU CA CB sing N N 235 LEU CA HA sing N N 236 LEU C O doub N N 237 LEU C OXT sing N N 238 LEU CB CG sing N N 239 LEU CB HB2 sing N N 240 LEU CB HB3 sing N N 241 LEU CG CD1 sing N N 242 LEU CG CD2 sing N N 243 LEU CG HG sing N N 244 LEU CD1 HD11 sing N N 245 LEU CD1 HD12 sing N N 246 LEU CD1 HD13 sing N N 247 LEU CD2 HD21 sing N N 248 LEU CD2 HD22 sing N N 249 LEU CD2 HD23 sing N N 250 LEU OXT HXT sing N N 251 LYS N CA sing N N 252 LYS N H sing N N 253 LYS N H2 sing N N 254 LYS CA C sing N N 255 LYS CA CB sing N N 256 LYS CA HA sing N N 257 LYS C O doub N N 258 LYS C OXT sing N N 259 LYS CB CG sing N N 260 LYS CB HB2 sing N N 261 LYS CB HB3 sing N N 262 LYS CG CD sing N N 263 LYS CG HG2 sing N N 264 LYS CG HG3 sing N N 265 LYS CD CE sing N N 266 LYS CD HD2 sing N N 267 LYS CD HD3 sing N N 268 LYS CE NZ sing N N 269 LYS CE HE2 sing N N 270 LYS CE HE3 sing N N 271 LYS NZ HZ1 sing N N 272 LYS NZ HZ2 sing N N 273 LYS NZ HZ3 sing N N 274 LYS OXT HXT sing N N 275 MET N CA sing N N 276 MET N H sing N N 277 MET N H2 sing N N 278 MET CA C sing N N 279 MET CA CB sing N N 280 MET CA HA sing N N 281 MET C O doub N N 282 MET C OXT sing N N 283 MET CB CG sing N N 284 MET CB HB2 sing N N 285 MET CB HB3 sing N N 286 MET CG SD sing N N 287 MET CG HG2 sing N N 288 MET CG HG3 sing N N 289 MET SD CE sing N N 290 MET CE HE1 sing N N 291 MET CE HE2 sing N N 292 MET CE HE3 sing N N 293 MET OXT HXT sing N N 294 PRO N CA sing N N 295 PRO N CD sing N N 296 PRO N H sing N N 297 PRO CA C sing N N 298 PRO CA CB sing N N 299 PRO CA HA sing N N 300 PRO C O doub N N 301 PRO C OXT sing N N 302 PRO CB CG sing N N 303 PRO CB HB2 sing N N 304 PRO CB HB3 sing N N 305 PRO CG CD sing N N 306 PRO CG HG2 sing N N 307 PRO CG HG3 sing N N 308 PRO CD HD2 sing N N 309 PRO CD HD3 sing N N 310 PRO OXT HXT sing N N 311 SER N CA sing N N 312 SER N H sing N N 313 SER N H2 sing N N 314 SER CA C sing N N 315 SER CA CB sing N N 316 SER CA HA sing N N 317 SER C O doub N N 318 SER C OXT sing N N 319 SER CB OG sing N N 320 SER CB HB2 sing N N 321 SER CB HB3 sing N N 322 SER OG HG sing N N 323 SER OXT HXT sing N N 324 THR N CA sing N N 325 THR N H sing N N 326 THR N H2 sing N N 327 THR CA C sing N N 328 THR CA CB sing N N 329 THR CA HA sing N N 330 THR C O doub N N 331 THR C OXT sing N N 332 THR CB OG1 sing N N 333 THR CB CG2 sing N N 334 THR CB HB sing N N 335 THR OG1 HG1 sing N N 336 THR CG2 HG21 sing N N 337 THR CG2 HG22 sing N N 338 THR CG2 HG23 sing N N 339 THR OXT HXT sing N N 340 TRP N CA sing N N 341 TRP N H sing N N 342 TRP N H2 sing N N 343 TRP CA C sing N N 344 TRP CA CB sing N N 345 TRP CA HA sing N N 346 TRP C O doub N N 347 TRP C OXT sing N N 348 TRP CB CG sing N N 349 TRP CB HB2 sing N N 350 TRP CB HB3 sing N N 351 TRP CG CD1 doub Y N 352 TRP CG CD2 sing Y N 353 TRP CD1 NE1 sing Y N 354 TRP CD1 HD1 sing N N 355 TRP CD2 CE2 doub Y N 356 TRP CD2 CE3 sing Y N 357 TRP NE1 CE2 sing Y N 358 TRP NE1 HE1 sing N N 359 TRP CE2 CZ2 sing Y N 360 TRP CE3 CZ3 doub Y N 361 TRP CE3 HE3 sing N N 362 TRP CZ2 CH2 doub Y N 363 TRP CZ2 HZ2 sing N N 364 TRP CZ3 CH2 sing Y N 365 TRP CZ3 HZ3 sing N N 366 TRP CH2 HH2 sing N N 367 TRP OXT HXT sing N N 368 TYR N CA sing N N 369 TYR N H sing N N 370 TYR N H2 sing N N 371 TYR CA C sing N N 372 TYR CA CB sing N N 373 TYR CA HA sing N N 374 TYR C O doub N N 375 TYR C OXT sing N N 376 TYR CB CG sing N N 377 TYR CB HB2 sing N N 378 TYR CB HB3 sing N N 379 TYR CG CD1 doub Y N 380 TYR CG CD2 sing Y N 381 TYR CD1 CE1 sing Y N 382 TYR CD1 HD1 sing N N 383 TYR CD2 CE2 doub Y N 384 TYR CD2 HD2 sing N N 385 TYR CE1 CZ doub Y N 386 TYR CE1 HE1 sing N N 387 TYR CE2 CZ sing Y N 388 TYR CE2 HE2 sing N N 389 TYR CZ OH sing N N 390 TYR OH HH sing N N 391 TYR OXT HXT sing N N 392 VAL N CA sing N N 393 VAL N H sing N N 394 VAL N H2 sing N N 395 VAL CA C sing N N 396 VAL CA CB sing N N 397 VAL CA HA sing N N 398 VAL C O doub N N 399 VAL C OXT sing N N 400 VAL CB CG1 sing N N 401 VAL CB CG2 sing N N 402 VAL CB HB sing N N 403 VAL CG1 HG11 sing N N 404 VAL CG1 HG12 sing N N 405 VAL CG1 HG13 sing N N 406 VAL CG2 HG21 sing N N 407 VAL CG2 HG22 sing N N 408 VAL CG2 HG23 sing N N 409 VAL OXT HXT sing N N 410 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 351C _pdbx_initial_refinement_model.details 'PDB entry 351C' # _atom_sites.entry_id 4JCG _atom_sites.fract_transf_matrix[1][1] 0.016568 _atom_sites.fract_transf_matrix[1][2] 0.009565 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019131 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009163 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O S # loop_