HEADER OXIDOREDUCTASE 26-FEB-13 4JE1 TITLE CRYSTAL STRUCTURE OF THIOL PEROXIDASE FROM BURKHOLDERIA CENOCEPACIA TITLE 2 J2315 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE THIOL PEROXIDASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.11.1.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA CENOCEPACIA; SOURCE 3 ORGANISM_TAXID: 216591; SOURCE 4 STRAIN: J2315; SOURCE 5 GENE: TPX, BCEJ2315_33620, BCAL3424; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: BG1861 KEYWDS SSGCID, THIOL PEROXIDASE, STRUCTURAL GENOMICS, NIAID, NATIONAL KEYWDS 2 INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES, SEATTLE STRUCTURAL KEYWDS 3 GENOMICS CENTER FOR INFECTIOUS DISEASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 25-MAY-16 4JE1 1 JRNL REVDAT 1 20-MAR-13 4JE1 0 JRNL AUTH SSGCID,D.R.DAVIES,J.A.ABENDROTH,M.C.CLIFTON,T.EDWARDS, JRNL AUTH 2 D.LORIMER JRNL TITL CRYSTAL STRUCTURE OF THIOL PEROXIDASE FROM BURKHOLDERIA JRNL TITL 2 CENOCEPACIA J2315 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 61735 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.171 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3127 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4327 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.27 REMARK 3 BIN R VALUE (WORKING SET) : 0.1870 REMARK 3 BIN FREE R VALUE SET COUNT : 205 REMARK 3 BIN FREE R VALUE : 0.2190 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2441 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 476 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.40000 REMARK 3 B22 (A**2) : -0.15000 REMARK 3 B33 (A**2) : -0.11000 REMARK 3 B12 (A**2) : 0.06000 REMARK 3 B13 (A**2) : -0.35000 REMARK 3 B23 (A**2) : -0.04000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.054 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.055 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.032 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.496 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2569 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2478 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3537 ; 1.337 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5684 ; 0.725 ; 3.002 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 364 ; 5.984 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 95 ;34.695 ;24.632 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 378 ;11.118 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;14.971 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 443 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3003 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 553 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1389 ; 0.538 ; 0.546 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1388 ; 0.531 ; 0.545 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1740 ; 0.958 ; 0.817 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -6 A 1 REMARK 3 ORIGIN FOR THE GROUP (A): 11.5447 -39.1283 -38.2072 REMARK 3 T TENSOR REMARK 3 T11: 0.0868 T22: 0.1554 REMARK 3 T33: 0.0100 T12: -0.0684 REMARK 3 T13: 0.0036 T23: -0.0173 REMARK 3 L TENSOR REMARK 3 L11: 3.1476 L22: 14.9323 REMARK 3 L33: 1.2564 L12: 1.4546 REMARK 3 L13: -1.9697 L23: -1.3583 REMARK 3 S TENSOR REMARK 3 S11: 0.3810 S12: 0.0692 S13: -0.0101 REMARK 3 S21: 0.5368 S22: -0.3871 S23: -0.2838 REMARK 3 S31: -0.2686 S32: 0.0069 S33: 0.0061 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 11 REMARK 3 ORIGIN FOR THE GROUP (A): 20.5032 -24.4014 -26.5481 REMARK 3 T TENSOR REMARK 3 T11: 0.0693 T22: 0.0286 REMARK 3 T33: 0.0409 T12: 0.0225 REMARK 3 T13: -0.0034 T23: 0.0025 REMARK 3 L TENSOR REMARK 3 L11: 3.6489 L22: 1.0408 REMARK 3 L33: 2.3170 L12: 0.5629 REMARK 3 L13: 1.1082 L23: -0.8094 REMARK 3 S TENSOR REMARK 3 S11: 0.0543 S12: 0.0199 S13: -0.0686 REMARK 3 S21: 0.0462 S22: -0.0590 S23: 0.0683 REMARK 3 S31: 0.0309 S32: 0.0412 S33: 0.0047 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 12 A 155 REMARK 3 ORIGIN FOR THE GROUP (A): 12.6919 -8.7690 -35.7533 REMARK 3 T TENSOR REMARK 3 T11: 0.0459 T22: 0.0418 REMARK 3 T33: 0.0488 T12: -0.0017 REMARK 3 T13: -0.0022 T23: 0.0022 REMARK 3 L TENSOR REMARK 3 L11: 0.0538 L22: 0.2174 REMARK 3 L33: 0.4819 L12: -0.0770 REMARK 3 L13: 0.0220 L23: 0.1857 REMARK 3 S TENSOR REMARK 3 S11: 0.0014 S12: -0.0031 S13: -0.0044 REMARK 3 S21: -0.0164 S22: -0.0010 S23: 0.0209 REMARK 3 S31: -0.0181 S32: 0.0093 S33: -0.0005 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 156 A 167 REMARK 3 ORIGIN FOR THE GROUP (A): 15.5341 -15.7155 -47.5741 REMARK 3 T TENSOR REMARK 3 T11: 0.0612 T22: 0.0355 REMARK 3 T33: 0.0334 T12: -0.0041 REMARK 3 T13: -0.0069 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 1.5974 L22: 1.1646 REMARK 3 L33: 4.5799 L12: -0.5971 REMARK 3 L13: 1.4803 L23: -0.5714 REMARK 3 S TENSOR REMARK 3 S11: 0.0388 S12: 0.0745 S13: -0.0197 REMARK 3 S21: -0.0286 S22: -0.0651 S23: -0.0107 REMARK 3 S31: -0.1932 S32: 0.0877 S33: 0.0263 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 9 REMARK 3 ORIGIN FOR THE GROUP (A): 6.3600 15.8242 -15.5648 REMARK 3 T TENSOR REMARK 3 T11: 0.0555 T22: 0.0339 REMARK 3 T33: 0.0530 T12: 0.0198 REMARK 3 T13: -0.0169 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 1.1612 L22: 3.2165 REMARK 3 L33: 2.5226 L12: 0.2156 REMARK 3 L13: 1.6538 L23: -0.4205 REMARK 3 S TENSOR REMARK 3 S11: 0.0080 S12: -0.0411 S13: 0.0239 REMARK 3 S21: 0.0837 S22: -0.0165 S23: 0.1193 REMARK 3 S31: -0.0136 S32: -0.0577 S33: 0.0086 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 10 B 64 REMARK 3 ORIGIN FOR THE GROUP (A): 19.7523 1.6665 -9.8683 REMARK 3 T TENSOR REMARK 3 T11: 0.0498 T22: 0.0501 REMARK 3 T33: 0.0395 T12: 0.0056 REMARK 3 T13: 0.0064 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 0.1037 L22: 0.2850 REMARK 3 L33: 0.2546 L12: 0.1431 REMARK 3 L13: 0.1580 L23: 0.1855 REMARK 3 S TENSOR REMARK 3 S11: 0.0115 S12: 0.0035 S13: -0.0053 REMARK 3 S21: 0.0170 S22: -0.0029 S23: -0.0246 REMARK 3 S31: 0.0170 S32: 0.0121 S33: -0.0086 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 65 B 152 REMARK 3 ORIGIN FOR THE GROUP (A): 20.7899 3.3695 -11.2441 REMARK 3 T TENSOR REMARK 3 T11: 0.0469 T22: 0.0491 REMARK 3 T33: 0.0478 T12: 0.0023 REMARK 3 T13: 0.0012 T23: 0.0051 REMARK 3 L TENSOR REMARK 3 L11: 0.0954 L22: 0.1982 REMARK 3 L33: 0.2414 L12: 0.0126 REMARK 3 L13: 0.0787 L23: 0.0703 REMARK 3 S TENSOR REMARK 3 S11: -0.0008 S12: 0.0045 S13: -0.0164 REMARK 3 S21: 0.0077 S22: 0.0014 S23: 0.0047 REMARK 3 S31: -0.0169 S32: 0.0215 S33: -0.0005 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 153 B 167 REMARK 3 ORIGIN FOR THE GROUP (A): 22.1901 14.4081 -6.9257 REMARK 3 T TENSOR REMARK 3 T11: 0.0528 T22: 0.0512 REMARK 3 T33: 0.0383 T12: 0.0069 REMARK 3 T13: -0.0002 T23: -0.0060 REMARK 3 L TENSOR REMARK 3 L11: 3.3328 L22: 0.5530 REMARK 3 L33: 2.3786 L12: -0.2739 REMARK 3 L13: 2.8142 L23: -0.2232 REMARK 3 S TENSOR REMARK 3 S11: 0.0202 S12: 0.2001 S13: -0.0282 REMARK 3 S21: 0.0399 S22: -0.0005 S23: -0.0337 REMARK 3 S31: 0.0038 S32: 0.1665 S33: -0.0197 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4JE1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-FEB-13. REMARK 100 THE RCSB ID CODE IS RCSB077927. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JAN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.00 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.283619 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61735 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: EBS INTERNAL TRACKING NUMBER HEPES (PH REMARK 280 7.0), 500 MM NACL, 2 MM DTT, 0.025% SODIUM AZIDE, 5% GLYCEROL, REMARK 280 0.4 UL X 0.4 UL DROP WITH 200 MM AMMONIUM NITRATE, 20% (W/V) PEG REMARK 280 3350. 20% ETHYLENE GLYCOL CRYOPROTECTANT, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 MET B -7 REMARK 465 ALA B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A -1 CG ND1 CD2 CE1 NE2 REMARK 470 HIS A 0 CG ND1 CD2 CE1 NE2 REMARK 470 SER A 2 OG REMARK 470 LYS A 28 CG CD CE NZ REMARK 470 THR A 91 OG1 CG2 REMARK 470 SER B 2 OG REMARK 470 LYS B 28 CG CD CE NZ REMARK 470 LYS B 66 CG CD CE NZ REMARK 470 ARG B 92 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 156 CG CD OE1 OE2 REMARK 470 LYS B 167 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 330 O HOH A 339 1.95 REMARK 500 O ALA B 140 O HOH B 532 2.02 REMARK 500 NE2 GLN A 141 O HOH A 424 2.17 REMARK 500 O HOH B 444 O HOH B 532 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 132 -179.97 -67.98 REMARK 500 ASP B 56 46.19 -107.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SSGCID-BUCEA.00055.A RELATED DB: TARGETTRACK DBREF 4JE1 A 1 167 UNP B4E5V4 B4E5V4_BURCJ 1 167 DBREF 4JE1 B 1 167 UNP B4E5V4 B4E5V4_BURCJ 1 167 SEQADV 4JE1 MET A -7 UNP B4E5V4 EXPRESSION TAG SEQADV 4JE1 ALA A -6 UNP B4E5V4 EXPRESSION TAG SEQADV 4JE1 HIS A -5 UNP B4E5V4 EXPRESSION TAG SEQADV 4JE1 HIS A -4 UNP B4E5V4 EXPRESSION TAG SEQADV 4JE1 HIS A -3 UNP B4E5V4 EXPRESSION TAG SEQADV 4JE1 HIS A -2 UNP B4E5V4 EXPRESSION TAG SEQADV 4JE1 HIS A -1 UNP B4E5V4 EXPRESSION TAG SEQADV 4JE1 HIS A 0 UNP B4E5V4 EXPRESSION TAG SEQADV 4JE1 MET B -7 UNP B4E5V4 EXPRESSION TAG SEQADV 4JE1 ALA B -6 UNP B4E5V4 EXPRESSION TAG SEQADV 4JE1 HIS B -5 UNP B4E5V4 EXPRESSION TAG SEQADV 4JE1 HIS B -4 UNP B4E5V4 EXPRESSION TAG SEQADV 4JE1 HIS B -3 UNP B4E5V4 EXPRESSION TAG SEQADV 4JE1 HIS B -2 UNP B4E5V4 EXPRESSION TAG SEQADV 4JE1 HIS B -1 UNP B4E5V4 EXPRESSION TAG SEQADV 4JE1 HIS B 0 UNP B4E5V4 EXPRESSION TAG SEQRES 1 A 175 MET ALA HIS HIS HIS HIS HIS HIS MET SER LYS VAL THR SEQRES 2 A 175 LEU GLY GLY ASN PRO ILE ASP LEU ALA GLY THR PHE PRO SEQRES 3 A 175 ALA VAL GLY ALA GLN ALA ALA ASP PHE LYS LEU VAL GLY SEQRES 4 A 175 LYS ASP LEU ALA ASP LEU SER LEU ALA SER PHE ALA GLY SEQRES 5 A 175 LYS ARG LYS VAL LEU ASN ILE VAL PRO SER LEU ASP THR SEQRES 6 A 175 PRO THR CYS ALA THR SER THR ARG LYS PHE ASN GLU ALA SEQRES 7 A 175 ALA SER SER LEU ASP ASN THR VAL VAL ILE VAL VAL SER SEQRES 8 A 175 ALA ASP LEU PRO PHE ALA ALA THR ARG PHE CYS THR THR SEQRES 9 A 175 GLU GLY LEU ALA ASN VAL VAL THR ALA SER THR PHE ARG SEQRES 10 A 175 THR GLY ARG ALA PHE ALA ASN ALA TYR GLY VAL ASP VAL SEQRES 11 A 175 THR SER GLY PRO LEU ASN GLY LEU THR ALA ARG ALA VAL SEQRES 12 A 175 VAL VAL LEU ASP ALA GLN ASP LYS VAL ILE HIS ALA GLU SEQRES 13 A 175 LEU VAL GLY GLU ILE LYS ASP GLU PRO ASN TYR ASP ALA SEQRES 14 A 175 ALA LEU ALA ALA LEU LYS SEQRES 1 B 175 MET ALA HIS HIS HIS HIS HIS HIS MET SER LYS VAL THR SEQRES 2 B 175 LEU GLY GLY ASN PRO ILE ASP LEU ALA GLY THR PHE PRO SEQRES 3 B 175 ALA VAL GLY ALA GLN ALA ALA ASP PHE LYS LEU VAL GLY SEQRES 4 B 175 LYS ASP LEU ALA ASP LEU SER LEU ALA SER PHE ALA GLY SEQRES 5 B 175 LYS ARG LYS VAL LEU ASN ILE VAL PRO SER LEU ASP THR SEQRES 6 B 175 PRO THR CYS ALA THR SER THR ARG LYS PHE ASN GLU ALA SEQRES 7 B 175 ALA SER SER LEU ASP ASN THR VAL VAL ILE VAL VAL SER SEQRES 8 B 175 ALA ASP LEU PRO PHE ALA ALA THR ARG PHE CYS THR THR SEQRES 9 B 175 GLU GLY LEU ALA ASN VAL VAL THR ALA SER THR PHE ARG SEQRES 10 B 175 THR GLY ARG ALA PHE ALA ASN ALA TYR GLY VAL ASP VAL SEQRES 11 B 175 THR SER GLY PRO LEU ASN GLY LEU THR ALA ARG ALA VAL SEQRES 12 B 175 VAL VAL LEU ASP ALA GLN ASP LYS VAL ILE HIS ALA GLU SEQRES 13 B 175 LEU VAL GLY GLU ILE LYS ASP GLU PRO ASN TYR ASP ALA SEQRES 14 B 175 ALA LEU ALA ALA LEU LYS HET EDO B 201 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO C2 H6 O2 FORMUL 4 HOH *476(H2 O) HELIX 1 1 SER A 38 ALA A 43 5 6 HELIX 2 2 ALA A 61 LEU A 74 1 14 HELIX 3 3 LEU A 86 PHE A 93 5 8 HELIX 4 4 ARG A 112 TYR A 118 1 7 HELIX 5 5 ASN A 158 ALA A 165 1 8 HELIX 6 6 SER B 38 ALA B 43 5 6 HELIX 7 7 ALA B 61 SER B 73 1 13 HELIX 8 8 LEU B 86 THR B 91 1 6 HELIX 9 9 ARG B 112 TYR B 118 1 7 HELIX 10 10 ASN B 158 ALA B 165 1 8 SHEET 1 A 2 THR A 5 LEU A 6 0 SHEET 2 A 2 ASN A 9 PRO A 10 -1 O ASN A 9 N LEU A 6 SHEET 1 B 2 LEU A 13 ALA A 14 0 SHEET 2 B 2 ASP A 121 VAL A 122 -1 O ASP A 121 N ALA A 14 SHEET 1 C 2 LEU A 29 VAL A 30 0 SHEET 2 C 2 ASP A 36 LEU A 37 -1 O LEU A 37 N LEU A 29 SHEET 1 D 5 VAL A 103 SER A 106 0 SHEET 2 D 5 THR A 77 SER A 83 1 N VAL A 79 O VAL A 103 SHEET 3 D 5 ARG A 46 ILE A 51 1 N VAL A 48 O ILE A 80 SHEET 4 D 5 ALA A 134 LEU A 138 -1 O VAL A 136 N LEU A 49 SHEET 5 D 5 VAL A 144 LEU A 149 -1 O HIS A 146 N VAL A 137 SHEET 1 E 2 THR B 5 LEU B 6 0 SHEET 2 E 2 ASN B 9 PRO B 10 -1 O ASN B 9 N LEU B 6 SHEET 1 F 2 LEU B 13 ALA B 14 0 SHEET 2 F 2 ASP B 121 VAL B 122 -1 O ASP B 121 N ALA B 14 SHEET 1 G 2 LEU B 29 VAL B 30 0 SHEET 2 G 2 ASP B 36 LEU B 37 -1 O LEU B 37 N LEU B 29 SHEET 1 H 5 VAL B 102 SER B 106 0 SHEET 2 H 5 THR B 77 SER B 83 1 N VAL B 79 O VAL B 103 SHEET 3 H 5 ARG B 46 ILE B 51 1 N VAL B 48 O ILE B 80 SHEET 4 H 5 ALA B 134 LEU B 138 -1 O VAL B 136 N LEU B 49 SHEET 5 H 5 VAL B 144 LEU B 149 -1 O ILE B 145 N VAL B 137 SSBOND 1 CYS A 60 CYS A 94 1555 1555 2.05 SSBOND 2 CYS B 60 CYS B 94 1555 1555 2.04 SITE 1 AC1 7 HIS A -2 HIS A -5 ARG A 65 GLU A 97 SITE 2 AC1 7 GLN B 23 GLN B 141 LYS B 143 CRYST1 38.910 44.290 53.080 88.13 101.34 115.10 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025700 0.012040 0.005852 0.00000 SCALE2 0.000000 0.024933 0.001429 0.00000 SCALE3 0.000000 0.000000 0.019246 0.00000