data_4JEB # _entry.id 4JEB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4JEB pdb_00004jeb 10.2210/pdb4jeb/pdb RCSB RCSB077937 ? ? WWPDB D_1000077937 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-08-21 2 'Structure model' 1 1 2013-08-28 3 'Structure model' 1 2 2023-09-20 4 'Structure model' 1 3 2024-11-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_ref_seq_dif 8 3 'Structure model' struct_site 9 4 'Structure model' pdbx_entry_details 10 4 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 21 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 22 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 23 3 'Structure model' '_pdbx_struct_conn_angle.value' 24 3 'Structure model' '_struct_conn.pdbx_dist_value' 25 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 26 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 39 3 'Structure model' '_struct_ref_seq_dif.details' 40 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 41 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 42 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 4JEB _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-02-26 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3HNK 'Dimeric assembly of RIDC1' unspecified PDB 2BC5 'Cytochrome b562 with engineered c-type heme linkages' unspecified PDB 2QLA 'Zinc-mediated assembly of MBPC1' unspecified PDB 3IQ5 'metal-free tetrameric cytochrome cb562 complex with two interfacial disulfide bonds' unspecified PDB 3IQ6 'Zn(II) mediated tetrameric cytochrome cb562 complex with two interfacial disulfide bonds' unspecified PDB 3HNI 'Zn mediated RIDC1 tetramer' unspecified PDB 4JE9 'Eengineered metal-free RIDC1 construct with four interfacial disulfide bonds' unspecified PDB 4JEA 'Engineered Zn-RIDC1 construct with four interfacial disulfide bonds' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tezcan, F.A.' 1 'Medina-Morales, A.M.' 2 'Perez, A.' 3 'Brodin, J.D.' 4 # _citation.id primary _citation.title 'In Vitro and Cellular Self-Assembly of a Zn-Binding Protein Cryptand via Templated Disulfide Bonds.' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 135 _citation.page_first 12013 _citation.page_last 12022 _citation.year 2013 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23905754 _citation.pdbx_database_id_DOI 10.1021/ja405318d # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Medina-Morales, A.' 1 ? primary 'Perez, A.' 2 ? primary 'Brodin, J.D.' 3 ? primary 'Tezcan, F.A.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'soluble cytochrome b562' 11564.073 2 ? 'R34A, L38A, Q41W, K42S, K59A, D66W, V69I, D73H, D74A, K77H, E81C, T96C, R98C, Y101C' 'UNP residues 23-128' ? 2 non-polymer syn 'PROTOPORPHYRIN IX CONTAINING FE' 616.487 2 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 3 ? ? ? ? 4 water nat water 18.015 39 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Cytochrome b-562' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ADLEDNMETLNDNLKVIEKADNAAQVKDALTKMAAAAADAWSATPPKLEDKSPDSPEMADFRHGFWILIGQIHAALHLAN CGKVKEAQAAAEQLKCTCNACHQKYR ; _entity_poly.pdbx_seq_one_letter_code_can ;ADLEDNMETLNDNLKVIEKADNAAQVKDALTKMAAAAADAWSATPPKLEDKSPDSPEMADFRHGFWILIGQIHAALHLAN CGKVKEAQAAAEQLKCTCNACHQKYR ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PROTOPORPHYRIN IX CONTAINING FE' HEM 3 'ZINC ION' ZN 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ASP n 1 3 LEU n 1 4 GLU n 1 5 ASP n 1 6 ASN n 1 7 MET n 1 8 GLU n 1 9 THR n 1 10 LEU n 1 11 ASN n 1 12 ASP n 1 13 ASN n 1 14 LEU n 1 15 LYS n 1 16 VAL n 1 17 ILE n 1 18 GLU n 1 19 LYS n 1 20 ALA n 1 21 ASP n 1 22 ASN n 1 23 ALA n 1 24 ALA n 1 25 GLN n 1 26 VAL n 1 27 LYS n 1 28 ASP n 1 29 ALA n 1 30 LEU n 1 31 THR n 1 32 LYS n 1 33 MET n 1 34 ALA n 1 35 ALA n 1 36 ALA n 1 37 ALA n 1 38 ALA n 1 39 ASP n 1 40 ALA n 1 41 TRP n 1 42 SER n 1 43 ALA n 1 44 THR n 1 45 PRO n 1 46 PRO n 1 47 LYS n 1 48 LEU n 1 49 GLU n 1 50 ASP n 1 51 LYS n 1 52 SER n 1 53 PRO n 1 54 ASP n 1 55 SER n 1 56 PRO n 1 57 GLU n 1 58 MET n 1 59 ALA n 1 60 ASP n 1 61 PHE n 1 62 ARG n 1 63 HIS n 1 64 GLY n 1 65 PHE n 1 66 TRP n 1 67 ILE n 1 68 LEU n 1 69 ILE n 1 70 GLY n 1 71 GLN n 1 72 ILE n 1 73 HIS n 1 74 ALA n 1 75 ALA n 1 76 LEU n 1 77 HIS n 1 78 LEU n 1 79 ALA n 1 80 ASN n 1 81 CYS n 1 82 GLY n 1 83 LYS n 1 84 VAL n 1 85 LYS n 1 86 GLU n 1 87 ALA n 1 88 GLN n 1 89 ALA n 1 90 ALA n 1 91 ALA n 1 92 GLU n 1 93 GLN n 1 94 LEU n 1 95 LYS n 1 96 CYS n 1 97 THR n 1 98 CYS n 1 99 ASN n 1 100 ALA n 1 101 CYS n 1 102 HIS n 1 103 GLN n 1 104 LYS n 1 105 TYR n 1 106 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene cybC _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'B21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEM non-polymer . 'PROTOPORPHYRIN IX CONTAINING FE' HEME 'C34 H32 Fe N4 O4' 616.487 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 ASP 2 2 2 ASP ASP A . n A 1 3 LEU 3 3 3 LEU LEU A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 ASP 5 5 5 ASP ASP A . n A 1 6 ASN 6 6 6 ASN ASN A . n A 1 7 MET 7 7 7 MET MET A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 ASN 11 11 11 ASN ASN A . n A 1 12 ASP 12 12 12 ASP ASP A . n A 1 13 ASN 13 13 13 ASN ASN A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 GLN 25 25 25 GLN GLN A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 MET 33 33 33 MET MET A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 TRP 41 41 41 TRP TRP A . n A 1 42 SER 42 42 42 SER SER A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 PRO 45 45 45 PRO PRO A . n A 1 46 PRO 46 46 46 PRO PRO A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 PRO 56 56 56 PRO PRO A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 MET 58 58 58 MET MET A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 PHE 61 61 61 PHE PHE A . n A 1 62 ARG 62 62 62 ARG ARG A . n A 1 63 HIS 63 63 63 HIS HIS A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 PHE 65 65 65 PHE PHE A . n A 1 66 TRP 66 66 66 TRP TRP A . n A 1 67 ILE 67 67 67 ILE ILE A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 GLN 71 71 71 GLN GLN A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 HIS 73 73 73 HIS HIS A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 HIS 77 77 77 HIS HIS A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 ALA 79 79 79 ALA ALA A . n A 1 80 ASN 80 80 80 ASN ASN A . n A 1 81 CYS 81 81 81 CYS CYS A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 GLN 88 88 88 GLN GLN A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 ALA 91 91 91 ALA ALA A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 GLN 93 93 93 GLN GLN A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 LYS 95 95 95 LYS LYS A . n A 1 96 CYS 96 96 96 CYS CYS A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 CYS 98 98 98 CYS CYS A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 CYS 101 101 101 CYS CYS A . n A 1 102 HIS 102 102 102 HIS HIS A . n A 1 103 GLN 103 103 103 GLN GLN A . n A 1 104 LYS 104 104 104 LYS LYS A . n A 1 105 TYR 105 105 105 TYR TYR A . n A 1 106 ARG 106 106 106 ARG ARG A . n B 1 1 ALA 1 1 1 ALA ALA B . n B 1 2 ASP 2 2 2 ASP ASP B . n B 1 3 LEU 3 3 3 LEU LEU B . n B 1 4 GLU 4 4 4 GLU GLU B . n B 1 5 ASP 5 5 5 ASP ASP B . n B 1 6 ASN 6 6 6 ASN ASN B . n B 1 7 MET 7 7 7 MET MET B . n B 1 8 GLU 8 8 8 GLU GLU B . n B 1 9 THR 9 9 9 THR THR B . n B 1 10 LEU 10 10 10 LEU LEU B . n B 1 11 ASN 11 11 11 ASN ASN B . n B 1 12 ASP 12 12 12 ASP ASP B . n B 1 13 ASN 13 13 13 ASN ASN B . n B 1 14 LEU 14 14 14 LEU LEU B . n B 1 15 LYS 15 15 15 LYS LYS B . n B 1 16 VAL 16 16 16 VAL VAL B . n B 1 17 ILE 17 17 17 ILE ILE B . n B 1 18 GLU 18 18 18 GLU GLU B . n B 1 19 LYS 19 19 19 LYS LYS B . n B 1 20 ALA 20 20 20 ALA ALA B . n B 1 21 ASP 21 21 21 ASP ASP B . n B 1 22 ASN 22 22 22 ASN ASN B . n B 1 23 ALA 23 23 23 ALA ALA B . n B 1 24 ALA 24 24 24 ALA ALA B . n B 1 25 GLN 25 25 25 GLN GLN B . n B 1 26 VAL 26 26 26 VAL VAL B . n B 1 27 LYS 27 27 27 LYS LYS B . n B 1 28 ASP 28 28 28 ASP ASP B . n B 1 29 ALA 29 29 29 ALA ALA B . n B 1 30 LEU 30 30 30 LEU LEU B . n B 1 31 THR 31 31 31 THR THR B . n B 1 32 LYS 32 32 32 LYS LYS B . n B 1 33 MET 33 33 33 MET MET B . n B 1 34 ALA 34 34 34 ALA ALA B . n B 1 35 ALA 35 35 35 ALA ALA B . n B 1 36 ALA 36 36 36 ALA ALA B . n B 1 37 ALA 37 37 37 ALA ALA B . n B 1 38 ALA 38 38 38 ALA ALA B . n B 1 39 ASP 39 39 39 ASP ASP B . n B 1 40 ALA 40 40 40 ALA ALA B . n B 1 41 TRP 41 41 41 TRP TRP B . n B 1 42 SER 42 42 42 SER SER B . n B 1 43 ALA 43 43 43 ALA ALA B . n B 1 44 THR 44 44 44 THR THR B . n B 1 45 PRO 45 45 45 PRO PRO B . n B 1 46 PRO 46 46 46 PRO PRO B . n B 1 47 LYS 47 47 47 LYS LYS B . n B 1 48 LEU 48 48 48 LEU LEU B . n B 1 49 GLU 49 49 49 GLU GLU B . n B 1 50 ASP 50 50 50 ASP ASP B . n B 1 51 LYS 51 51 51 LYS LYS B . n B 1 52 SER 52 52 52 SER SER B . n B 1 53 PRO 53 53 53 PRO PRO B . n B 1 54 ASP 54 54 54 ASP ASP B . n B 1 55 SER 55 55 55 SER SER B . n B 1 56 PRO 56 56 56 PRO PRO B . n B 1 57 GLU 57 57 57 GLU GLU B . n B 1 58 MET 58 58 58 MET MET B . n B 1 59 ALA 59 59 59 ALA ALA B . n B 1 60 ASP 60 60 60 ASP ASP B . n B 1 61 PHE 61 61 61 PHE PHE B . n B 1 62 ARG 62 62 62 ARG ARG B . n B 1 63 HIS 63 63 63 HIS HIS B . n B 1 64 GLY 64 64 64 GLY GLY B . n B 1 65 PHE 65 65 65 PHE PHE B . n B 1 66 TRP 66 66 66 TRP TRP B . n B 1 67 ILE 67 67 67 ILE ILE B . n B 1 68 LEU 68 68 68 LEU LEU B . n B 1 69 ILE 69 69 69 ILE ILE B . n B 1 70 GLY 70 70 70 GLY GLY B . n B 1 71 GLN 71 71 71 GLN GLN B . n B 1 72 ILE 72 72 72 ILE ILE B . n B 1 73 HIS 73 73 73 HIS HIS B . n B 1 74 ALA 74 74 74 ALA ALA B . n B 1 75 ALA 75 75 75 ALA ALA B . n B 1 76 LEU 76 76 76 LEU LEU B . n B 1 77 HIS 77 77 77 HIS HIS B . n B 1 78 LEU 78 78 78 LEU LEU B . n B 1 79 ALA 79 79 79 ALA ALA B . n B 1 80 ASN 80 80 80 ASN ASN B . n B 1 81 CYS 81 81 81 CYS CYS B . n B 1 82 GLY 82 82 82 GLY GLY B . n B 1 83 LYS 83 83 83 LYS LYS B . n B 1 84 VAL 84 84 84 VAL VAL B . n B 1 85 LYS 85 85 85 LYS LYS B . n B 1 86 GLU 86 86 86 GLU GLU B . n B 1 87 ALA 87 87 87 ALA ALA B . n B 1 88 GLN 88 88 88 GLN GLN B . n B 1 89 ALA 89 89 89 ALA ALA B . n B 1 90 ALA 90 90 90 ALA ALA B . n B 1 91 ALA 91 91 91 ALA ALA B . n B 1 92 GLU 92 92 92 GLU GLU B . n B 1 93 GLN 93 93 93 GLN GLN B . n B 1 94 LEU 94 94 94 LEU LEU B . n B 1 95 LYS 95 95 95 LYS LYS B . n B 1 96 CYS 96 96 96 CYS CYS B . n B 1 97 THR 97 97 97 THR THR B . n B 1 98 CYS 98 98 98 CYS CYS B . n B 1 99 ASN 99 99 99 ASN ASN B . n B 1 100 ALA 100 100 100 ALA ALA B . n B 1 101 CYS 101 101 101 CYS CYS B . n B 1 102 HIS 102 102 102 HIS HIS B . n B 1 103 GLN 103 103 103 GLN GLN B . n B 1 104 LYS 104 104 104 LYS LYS B . n B 1 105 TYR 105 105 105 TYR TYR B . n B 1 106 ARG 106 106 106 ARG ARG B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM 1 201 150 HEM HEM A . D 3 ZN 1 202 3 ZN ZN A . E 3 ZN 1 203 4 ZN ZN A . F 2 HEM 1 201 150 HEM HEM B . G 3 ZN 1 202 2 ZN ZN B . H 4 HOH 1 301 2 HOH HOH A . H 4 HOH 2 302 3 HOH HOH A . H 4 HOH 3 303 5 HOH HOH A . H 4 HOH 4 304 7 HOH HOH A . H 4 HOH 5 305 8 HOH HOH A . H 4 HOH 6 306 9 HOH HOH A . H 4 HOH 7 307 10 HOH HOH A . H 4 HOH 8 308 15 HOH HOH A . H 4 HOH 9 309 16 HOH HOH A . H 4 HOH 10 310 17 HOH HOH A . H 4 HOH 11 311 20 HOH HOH A . H 4 HOH 12 312 21 HOH HOH A . H 4 HOH 13 313 24 HOH HOH A . H 4 HOH 14 314 25 HOH HOH A . H 4 HOH 15 315 27 HOH HOH A . H 4 HOH 16 316 28 HOH HOH A . H 4 HOH 17 317 33 HOH HOH A . H 4 HOH 18 318 34 HOH HOH A . H 4 HOH 19 319 35 HOH HOH A . I 4 HOH 1 301 1 HOH HOH B . I 4 HOH 2 302 4 HOH HOH B . I 4 HOH 3 303 6 HOH HOH B . I 4 HOH 4 304 11 HOH HOH B . I 4 HOH 5 305 12 HOH HOH B . I 4 HOH 6 306 13 HOH HOH B . I 4 HOH 7 307 14 HOH HOH B . I 4 HOH 8 308 18 HOH HOH B . I 4 HOH 9 309 19 HOH HOH B . I 4 HOH 10 310 22 HOH HOH B . I 4 HOH 11 311 23 HOH HOH B . I 4 HOH 12 312 26 HOH HOH B . I 4 HOH 13 313 29 HOH HOH B . I 4 HOH 14 314 30 HOH HOH B . I 4 HOH 15 315 31 HOH HOH B . I 4 HOH 16 316 32 HOH HOH B . I 4 HOH 17 317 36 HOH HOH B . I 4 HOH 18 318 37 HOH HOH B . I 4 HOH 19 319 38 HOH HOH B . I 4 HOH 20 320 39 HOH HOH B . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALA 3.3.20 2011/05/18 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 2 REFMAC 5.5.0102 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 Blu-Ice . ? ? ? ? 'data collection' ? ? ? 5 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 6 PHASER . ? ? ? ? phasing ? ? ? # _cell.length_a 54.942 _cell.length_b 54.942 _cell.length_c 145.658 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 4JEB _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 31 1 2' _symmetry.entry_id 4JEB _symmetry.Int_Tables_number 151 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 4JEB _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.74 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 55.17 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '35% methyl-pentandiol, 0.1M HEPES pH 7.5, 0.2M NaCl, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2012-07-30 _diffrn_detector.details 'K-B focusing mirrors' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Liquid nitrogen-cooled crystal' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL12-2' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.98 _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL12-2 # _reflns.entry_id 4JEB _reflns.d_resolution_high 2.158 _reflns.d_resolution_low 48.553 _reflns.number_all 13468 _reflns.number_obs 13468 _reflns.pdbx_netI_over_sigmaI 6.500 _reflns.pdbx_Rsym_value 0.094 _reflns.pdbx_redundancy 5.200 _reflns.percent_possible_obs 96.900 _reflns.observed_criterion_sigma_F 2 _reflns.observed_criterion_sigma_I 2 _reflns.pdbx_Rmerge_I_obs ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.160 2.280 ? 7597 ? 0.692 1.100 0.692 ? 4.500 ? 1701 84.900 1 1 2.280 2.410 ? 10614 ? 0.471 1.600 0.471 ? 5.700 ? 1871 99.800 2 1 2.410 2.580 ? 9668 ? 0.295 2.600 0.295 ? 5.500 ? 1767 99.600 3 1 2.580 2.790 ? 9140 ? 0.190 3.900 0.190 ? 5.500 ? 1671 99.000 4 1 2.790 3.050 ? 8463 ? 0.132 5.300 0.132 ? 5.400 ? 1554 99.800 5 1 3.050 3.410 ? 7027 ? 0.106 5.900 0.106 ? 5.200 ? 1346 97.400 6 1 3.410 3.940 ? 6277 ? 0.098 6.300 0.098 ? 5.100 ? 1238 99.700 7 1 3.940 4.830 ? 4975 ? 0.096 6.500 0.096 ? 4.900 ? 1025 98.200 8 1 4.830 6.830 ? 3997 ? 0.094 6.700 0.094 ? 4.900 ? 822 97.300 9 1 6.830 36.415 ? 2243 ? 0.065 9.500 0.065 ? 4.700 ? 473 97.700 10 1 # _refine.entry_id 4JEB _refine.ls_d_res_high 2.3000 _refine.ls_d_res_low 48.5500 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.8000 _refine.ls_number_reflns_obs 11374 _refine.ls_number_reflns_all 13468 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2479 _refine.ls_R_factor_R_work 0.2436 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.3088 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 7.1000 _refine.ls_number_reflns_R_free 812 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 57.6607 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 2.7900 _refine.aniso_B[2][2] 2.7900 _refine.aniso_B[3][3] -4.1800 _refine.aniso_B[1][2] 1.3900 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9460 _refine.correlation_coeff_Fo_to_Fc_free 0.9140 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.4050 _refine.pdbx_overall_ESU_R_Free 0.2980 _refine.overall_SU_ML 0.2250 _refine.overall_SU_B 9.2070 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 3IQ6 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 89.550 _refine.B_iso_min 26.180 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1614 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 89 _refine_hist.number_atoms_solvent 39 _refine_hist.number_atoms_total 1742 _refine_hist.d_res_high 2.3000 _refine_hist.d_res_low 48.5500 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1760 0.019 0.022 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2408 1.560 2.094 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 212 5.196 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 77 40.469 26.494 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 287 17.708 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 4 24.698 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 247 0.106 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1350 0.007 0.021 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1066 0.916 1.500 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1686 1.737 2.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 693 2.497 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 721 3.977 4.500 ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 'X-RAY DIFFRACTION' 1 1 'TIGHT POSITIONAL' A 839 0.090 0.050 ? ? ? ? ? ? 2 'X-RAY DIFFRACTION' 1 1 'TIGHT THERMAL' A 839 0.240 0.500 ? ? ? ? ? ? # _refine_ls_shell.d_res_high 2.3000 _refine_ls_shell.d_res_low 2.3600 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.7600 _refine_ls_shell.number_reflns_R_work 780 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.3130 _refine_ls_shell.R_factor_R_free 0.3850 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 58 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 838 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 4JEB _struct.title 'Crystal structure of an engineered RIDC1 tetramer with four interfacial disulfide bonds and four three-coordinate Zn(II) sites' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4JEB _struct_keywords.pdbx_keywords 'ELECTRON TRANSPORT' _struct_keywords.text 'four-helix bundle, ELECTRON TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 2 ? G N N 3 ? H N N 4 ? I N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code C562_ECOLX _struct_ref.pdbx_db_accession P0ABE7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ADLEDNMETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLAN EGKVKEAQAAAEQLKTTRNAYHQKYR ; _struct_ref.pdbx_align_begin 23 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4JEB A 1 ? 106 ? P0ABE7 23 ? 128 ? 1 106 2 1 4JEB B 1 ? 106 ? P0ABE7 23 ? 128 ? 1 106 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4JEB ALA A 34 ? UNP P0ABE7 ARG 56 'engineered mutation' 34 1 1 4JEB ALA A 38 ? UNP P0ABE7 LEU 60 'engineered mutation' 38 2 1 4JEB TRP A 41 ? UNP P0ABE7 GLN 63 'engineered mutation' 41 3 1 4JEB SER A 42 ? UNP P0ABE7 LYS 64 'engineered mutation' 42 4 1 4JEB ALA A 59 ? UNP P0ABE7 LYS 81 'engineered mutation' 59 5 1 4JEB TRP A 66 ? UNP P0ABE7 ASP 88 'engineered mutation' 66 6 1 4JEB ILE A 69 ? UNP P0ABE7 VAL 91 'engineered mutation' 69 7 1 4JEB HIS A 73 ? UNP P0ABE7 ASP 95 'engineered mutation' 73 8 1 4JEB ALA A 74 ? UNP P0ABE7 ASP 96 'engineered mutation' 74 9 1 4JEB HIS A 77 ? UNP P0ABE7 LYS 99 'engineered mutation' 77 10 1 4JEB CYS A 81 ? UNP P0ABE7 GLU 103 'engineered mutation' 81 11 1 4JEB CYS A 96 ? UNP P0ABE7 THR 118 'engineered mutation' 96 12 1 4JEB CYS A 98 ? UNP P0ABE7 ARG 120 'engineered mutation' 98 13 1 4JEB CYS A 101 ? UNP P0ABE7 TYR 123 'engineered mutation' 101 14 2 4JEB ALA B 34 ? UNP P0ABE7 ARG 56 'engineered mutation' 34 15 2 4JEB ALA B 38 ? UNP P0ABE7 LEU 60 'engineered mutation' 38 16 2 4JEB TRP B 41 ? UNP P0ABE7 GLN 63 'engineered mutation' 41 17 2 4JEB SER B 42 ? UNP P0ABE7 LYS 64 'engineered mutation' 42 18 2 4JEB ALA B 59 ? UNP P0ABE7 LYS 81 'engineered mutation' 59 19 2 4JEB TRP B 66 ? UNP P0ABE7 ASP 88 'engineered mutation' 66 20 2 4JEB ILE B 69 ? UNP P0ABE7 VAL 91 'engineered mutation' 69 21 2 4JEB HIS B 73 ? UNP P0ABE7 ASP 95 'engineered mutation' 73 22 2 4JEB ALA B 74 ? UNP P0ABE7 ASP 96 'engineered mutation' 74 23 2 4JEB HIS B 77 ? UNP P0ABE7 LYS 99 'engineered mutation' 77 24 2 4JEB CYS B 81 ? UNP P0ABE7 GLU 103 'engineered mutation' 81 25 2 4JEB CYS B 96 ? UNP P0ABE7 THR 118 'engineered mutation' 96 26 2 4JEB CYS B 98 ? UNP P0ABE7 ARG 120 'engineered mutation' 98 27 2 4JEB CYS B 101 ? UNP P0ABE7 TYR 123 'engineered mutation' 101 28 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2190 ? 1 MORE -27 ? 1 'SSA (A^2)' 24840 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_554 -y,-x,-z-1/3 0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -48.5526666667 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 2 ? LYS A 19 ? ASP A 2 LYS A 19 1 ? 18 HELX_P HELX_P2 2 ASN A 22 ? TRP A 41 ? ASN A 22 TRP A 41 1 ? 20 HELX_P HELX_P3 3 PRO A 45 ? GLU A 49 ? PRO A 45 GLU A 49 5 ? 5 HELX_P HELX_P4 4 SER A 55 ? CYS A 81 ? SER A 55 CYS A 81 1 ? 27 HELX_P HELX_P5 5 LYS A 83 ? LEU A 94 ? LYS A 83 LEU A 94 1 ? 12 HELX_P HELX_P6 6 LEU A 94 ? ARG A 106 ? LEU A 94 ARG A 106 1 ? 13 HELX_P HELX_P7 7 ASP B 2 ? LYS B 19 ? ASP B 2 LYS B 19 1 ? 18 HELX_P HELX_P8 8 ASN B 22 ? TRP B 41 ? ASN B 22 TRP B 41 1 ? 20 HELX_P HELX_P9 9 PRO B 45 ? GLU B 49 ? PRO B 45 GLU B 49 5 ? 5 HELX_P HELX_P10 10 SER B 55 ? CYS B 81 ? SER B 55 CYS B 81 1 ? 27 HELX_P HELX_P11 11 LYS B 83 ? LEU B 94 ? LYS B 83 LEU B 94 1 ? 12 HELX_P HELX_P12 12 LEU B 94 ? ARG B 106 ? LEU B 94 ARG B 106 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 81 SG ? ? ? 1_555 B CYS 81 SG ? ? A CYS 81 B CYS 81 4_554 ? ? ? ? ? ? ? 2.040 ? ? disulf2 disulf ? ? A CYS 96 SG ? ? ? 1_555 A CYS 96 SG ? ? A CYS 96 A CYS 96 4_554 ? ? ? ? ? ? ? 2.065 ? ? disulf3 disulf ? ? B CYS 96 SG ? ? ? 1_555 B CYS 96 SG ? ? B CYS 96 B CYS 96 4_554 ? ? ? ? ? ? ? 2.062 ? ? metalc1 metalc ? ? A MET 7 SD ? ? ? 1_555 C HEM . FE ? ? A MET 7 A HEM 201 1_555 ? ? ? ? ? ? ? 2.416 ? ? metalc2 metalc ? ? A ASP 39 OD1 ? ? ? 1_555 E ZN . ZN ? ? A ASP 39 A ZN 203 1_555 ? ? ? ? ? ? ? 2.186 ? ? metalc3 metalc ? ? A HIS 63 NE2 ? ? ? 1_555 G ZN . ZN ? ? A HIS 63 B ZN 202 1_555 ? ? ? ? ? ? ? 2.076 ? ? metalc4 metalc ? ? A HIS 73 NE2 ? ? ? 1_555 D ZN . ZN ? ? A HIS 73 A ZN 202 1_555 ? ? ? ? ? ? ? 2.180 ? ? metalc5 metalc ? ? A HIS 77 NE2 ? ? ? 1_555 D ZN . ZN ? ? A HIS 77 A ZN 202 1_555 ? ? ? ? ? ? ? 2.311 ? ? metalc6 metalc ? ? A HIS 102 NE2 ? ? ? 1_555 C HEM . FE ? ? A HIS 102 A HEM 201 1_555 ? ? ? ? ? ? ? 2.097 ? ? metalc7 metalc ? ? D ZN . ZN ? ? ? 1_555 H HOH . O ? ? A ZN 202 A HOH 301 1_555 ? ? ? ? ? ? ? 2.107 ? ? metalc8 metalc ? ? D ZN . ZN ? ? ? 1_555 B HIS 63 NE2 ? ? A ZN 202 B HIS 63 1_555 ? ? ? ? ? ? ? 2.338 ? ? metalc9 metalc ? ? E ZN . ZN ? ? ? 1_555 H HOH . O ? ? A ZN 203 A HOH 304 1_555 ? ? ? ? ? ? ? 2.166 ? ? metalc10 metalc ? ? B MET 7 SD ? ? ? 1_555 F HEM . FE ? ? B MET 7 B HEM 201 1_555 ? ? ? ? ? ? ? 2.502 ? ? metalc11 metalc ? ? B HIS 73 NE2 ? ? ? 1_555 G ZN . ZN ? ? B HIS 73 B ZN 202 1_555 ? ? ? ? ? ? ? 2.189 ? ? metalc12 metalc ? ? B HIS 77 NE2 ? ? ? 1_555 G ZN . ZN ? ? B HIS 77 B ZN 202 1_555 ? ? ? ? ? ? ? 2.066 ? ? metalc13 metalc ? ? B HIS 102 NE2 ? ? ? 1_555 F HEM . FE ? ? B HIS 102 B HEM 201 1_555 ? ? ? ? ? ? ? 2.034 ? ? metalc14 metalc ? ? G ZN . ZN ? ? ? 1_555 I HOH . O ? ? B ZN 202 B HOH 301 1_555 ? ? ? ? ? ? ? 2.106 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SD ? A MET 7 ? A MET 7 ? 1_555 FE ? C HEM . ? A HEM 201 ? 1_555 NA ? C HEM . ? A HEM 201 ? 1_555 89.0 ? 2 SD ? A MET 7 ? A MET 7 ? 1_555 FE ? C HEM . ? A HEM 201 ? 1_555 NB ? C HEM . ? A HEM 201 ? 1_555 90.2 ? 3 NA ? C HEM . ? A HEM 201 ? 1_555 FE ? C HEM . ? A HEM 201 ? 1_555 NB ? C HEM . ? A HEM 201 ? 1_555 88.6 ? 4 SD ? A MET 7 ? A MET 7 ? 1_555 FE ? C HEM . ? A HEM 201 ? 1_555 NC ? C HEM . ? A HEM 201 ? 1_555 90.4 ? 5 NA ? C HEM . ? A HEM 201 ? 1_555 FE ? C HEM . ? A HEM 201 ? 1_555 NC ? C HEM . ? A HEM 201 ? 1_555 177.2 ? 6 NB ? C HEM . ? A HEM 201 ? 1_555 FE ? C HEM . ? A HEM 201 ? 1_555 NC ? C HEM . ? A HEM 201 ? 1_555 88.6 ? 7 SD ? A MET 7 ? A MET 7 ? 1_555 FE ? C HEM . ? A HEM 201 ? 1_555 ND ? C HEM . ? A HEM 201 ? 1_555 88.1 ? 8 NA ? C HEM . ? A HEM 201 ? 1_555 FE ? C HEM . ? A HEM 201 ? 1_555 ND ? C HEM . ? A HEM 201 ? 1_555 93.2 ? 9 NB ? C HEM . ? A HEM 201 ? 1_555 FE ? C HEM . ? A HEM 201 ? 1_555 ND ? C HEM . ? A HEM 201 ? 1_555 177.5 ? 10 NC ? C HEM . ? A HEM 201 ? 1_555 FE ? C HEM . ? A HEM 201 ? 1_555 ND ? C HEM . ? A HEM 201 ? 1_555 89.5 ? 11 SD ? A MET 7 ? A MET 7 ? 1_555 FE ? C HEM . ? A HEM 201 ? 1_555 NE2 ? A HIS 102 ? A HIS 102 ? 1_555 176.0 ? 12 NA ? C HEM . ? A HEM 201 ? 1_555 FE ? C HEM . ? A HEM 201 ? 1_555 NE2 ? A HIS 102 ? A HIS 102 ? 1_555 93.8 ? 13 NB ? C HEM . ? A HEM 201 ? 1_555 FE ? C HEM . ? A HEM 201 ? 1_555 NE2 ? A HIS 102 ? A HIS 102 ? 1_555 87.1 ? 14 NC ? C HEM . ? A HEM 201 ? 1_555 FE ? C HEM . ? A HEM 201 ? 1_555 NE2 ? A HIS 102 ? A HIS 102 ? 1_555 86.7 ? 15 ND ? C HEM . ? A HEM 201 ? 1_555 FE ? C HEM . ? A HEM 201 ? 1_555 NE2 ? A HIS 102 ? A HIS 102 ? 1_555 94.5 ? 16 OD1 ? A ASP 39 ? A ASP 39 ? 1_555 ZN ? E ZN . ? A ZN 203 ? 1_555 O ? H HOH . ? A HOH 304 ? 1_555 107.5 ? 17 NE2 ? A HIS 63 ? A HIS 63 ? 1_555 ZN ? G ZN . ? B ZN 202 ? 1_555 NE2 ? B HIS 73 ? B HIS 73 ? 1_555 93.9 ? 18 NE2 ? A HIS 63 ? A HIS 63 ? 1_555 ZN ? G ZN . ? B ZN 202 ? 1_555 NE2 ? B HIS 77 ? B HIS 77 ? 1_555 114.0 ? 19 NE2 ? B HIS 73 ? B HIS 73 ? 1_555 ZN ? G ZN . ? B ZN 202 ? 1_555 NE2 ? B HIS 77 ? B HIS 77 ? 1_555 100.7 ? 20 NE2 ? A HIS 63 ? A HIS 63 ? 1_555 ZN ? G ZN . ? B ZN 202 ? 1_555 O ? I HOH . ? B HOH 301 ? 1_555 119.2 ? 21 NE2 ? B HIS 73 ? B HIS 73 ? 1_555 ZN ? G ZN . ? B ZN 202 ? 1_555 O ? I HOH . ? B HOH 301 ? 1_555 110.0 ? 22 NE2 ? B HIS 77 ? B HIS 77 ? 1_555 ZN ? G ZN . ? B ZN 202 ? 1_555 O ? I HOH . ? B HOH 301 ? 1_555 114.9 ? 23 NE2 ? A HIS 73 ? A HIS 73 ? 1_555 ZN ? D ZN . ? A ZN 202 ? 1_555 NE2 ? A HIS 77 ? A HIS 77 ? 1_555 96.4 ? 24 NE2 ? A HIS 73 ? A HIS 73 ? 1_555 ZN ? D ZN . ? A ZN 202 ? 1_555 O ? H HOH . ? A HOH 301 ? 1_555 110.7 ? 25 NE2 ? A HIS 77 ? A HIS 77 ? 1_555 ZN ? D ZN . ? A ZN 202 ? 1_555 O ? H HOH . ? A HOH 301 ? 1_555 96.4 ? 26 NE2 ? A HIS 73 ? A HIS 73 ? 1_555 ZN ? D ZN . ? A ZN 202 ? 1_555 NE2 ? B HIS 63 ? B HIS 63 ? 1_555 129.3 ? 27 NE2 ? A HIS 77 ? A HIS 77 ? 1_555 ZN ? D ZN . ? A ZN 202 ? 1_555 NE2 ? B HIS 63 ? B HIS 63 ? 1_555 118.8 ? 28 O ? H HOH . ? A HOH 301 ? 1_555 ZN ? D ZN . ? A ZN 202 ? 1_555 NE2 ? B HIS 63 ? B HIS 63 ? 1_555 101.0 ? 29 SD ? B MET 7 ? B MET 7 ? 1_555 FE ? F HEM . ? B HEM 201 ? 1_555 NA ? F HEM . ? B HEM 201 ? 1_555 88.2 ? 30 SD ? B MET 7 ? B MET 7 ? 1_555 FE ? F HEM . ? B HEM 201 ? 1_555 NB ? F HEM . ? B HEM 201 ? 1_555 85.6 ? 31 NA ? F HEM . ? B HEM 201 ? 1_555 FE ? F HEM . ? B HEM 201 ? 1_555 NB ? F HEM . ? B HEM 201 ? 1_555 87.8 ? 32 SD ? B MET 7 ? B MET 7 ? 1_555 FE ? F HEM . ? B HEM 201 ? 1_555 NC ? F HEM . ? B HEM 201 ? 1_555 92.6 ? 33 NA ? F HEM . ? B HEM 201 ? 1_555 FE ? F HEM . ? B HEM 201 ? 1_555 NC ? F HEM . ? B HEM 201 ? 1_555 178.6 ? 34 NB ? F HEM . ? B HEM 201 ? 1_555 FE ? F HEM . ? B HEM 201 ? 1_555 NC ? F HEM . ? B HEM 201 ? 1_555 91.1 ? 35 SD ? B MET 7 ? B MET 7 ? 1_555 FE ? F HEM . ? B HEM 201 ? 1_555 ND ? F HEM . ? B HEM 201 ? 1_555 93.4 ? 36 NA ? F HEM . ? B HEM 201 ? 1_555 FE ? F HEM . ? B HEM 201 ? 1_555 ND ? F HEM . ? B HEM 201 ? 1_555 90.5 ? 37 NB ? F HEM . ? B HEM 201 ? 1_555 FE ? F HEM . ? B HEM 201 ? 1_555 ND ? F HEM . ? B HEM 201 ? 1_555 178.0 ? 38 NC ? F HEM . ? B HEM 201 ? 1_555 FE ? F HEM . ? B HEM 201 ? 1_555 ND ? F HEM . ? B HEM 201 ? 1_555 90.7 ? 39 SD ? B MET 7 ? B MET 7 ? 1_555 FE ? F HEM . ? B HEM 201 ? 1_555 NE2 ? B HIS 102 ? B HIS 102 ? 1_555 174.5 ? 40 NA ? F HEM . ? B HEM 201 ? 1_555 FE ? F HEM . ? B HEM 201 ? 1_555 NE2 ? B HIS 102 ? B HIS 102 ? 1_555 93.2 ? 41 NB ? F HEM . ? B HEM 201 ? 1_555 FE ? F HEM . ? B HEM 201 ? 1_555 NE2 ? B HIS 102 ? B HIS 102 ? 1_555 89.2 ? 42 NC ? F HEM . ? B HEM 201 ? 1_555 FE ? F HEM . ? B HEM 201 ? 1_555 NE2 ? B HIS 102 ? B HIS 102 ? 1_555 85.8 ? 43 ND ? F HEM . ? B HEM 201 ? 1_555 FE ? F HEM . ? B HEM 201 ? 1_555 NE2 ? B HIS 102 ? B HIS 102 ? 1_555 91.9 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 81 ? CYS B 81 ? CYS A 81 ? 1_555 CYS B 81 ? 4_554 SG SG . . . None 'Disulfide bridge' 2 CYS A 96 ? CYS A 96 ? CYS A 96 ? 1_555 CYS A 96 ? 4_554 SG SG . . . None 'Disulfide bridge' 3 CYS B 96 ? CYS B 96 ? CYS B 96 ? 1_555 CYS B 96 ? 4_554 SG SG . . . None 'Disulfide bridge' # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A HEM 201 ? 9 'BINDING SITE FOR RESIDUE HEM A 201' AC2 Software A ZN 202 ? 4 'BINDING SITE FOR RESIDUE ZN A 202' AC3 Software A ZN 203 ? 5 'BINDING SITE FOR RESIDUE ZN A 203' AC4 Software B HEM 201 ? 10 'BINDING SITE FOR RESIDUE HEM B 201' AC5 Software B ZN 202 ? 4 'BINDING SITE FOR RESIDUE ZN B 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 MET A 7 ? MET A 7 . ? 1_555 ? 2 AC1 9 ASN A 11 ? ASN A 11 . ? 1_555 ? 3 AC1 9 PHE A 61 ? PHE A 61 . ? 1_555 ? 4 AC1 9 PHE A 65 ? PHE A 65 . ? 1_555 ? 5 AC1 9 CYS A 98 ? CYS A 98 . ? 1_555 ? 6 AC1 9 CYS A 101 ? CYS A 101 . ? 1_555 ? 7 AC1 9 HIS A 102 ? HIS A 102 . ? 1_555 ? 8 AC1 9 TYR A 105 ? TYR A 105 . ? 1_555 ? 9 AC1 9 ARG A 106 ? ARG A 106 . ? 1_555 ? 10 AC2 4 HIS A 73 ? HIS A 73 . ? 1_555 ? 11 AC2 4 HIS A 77 ? HIS A 77 . ? 1_555 ? 12 AC2 4 HOH H . ? HOH A 301 . ? 1_555 ? 13 AC2 4 HIS B 63 ? HIS B 63 . ? 1_555 ? 14 AC3 5 ALA A 1 ? ALA A 1 . ? 6_555 ? 15 AC3 5 ASP A 39 ? ASP A 39 . ? 1_555 ? 16 AC3 5 ASP A 39 ? ASP A 39 . ? 6_555 ? 17 AC3 5 HOH H . ? HOH A 304 . ? 6_555 ? 18 AC3 5 HOH H . ? HOH A 304 . ? 1_555 ? 19 AC4 10 MET B 7 ? MET B 7 . ? 1_555 ? 20 AC4 10 ASN B 11 ? ASN B 11 . ? 1_555 ? 21 AC4 10 MET B 33 ? MET B 33 . ? 1_555 ? 22 AC4 10 PHE B 61 ? PHE B 61 . ? 1_555 ? 23 AC4 10 PHE B 65 ? PHE B 65 . ? 1_555 ? 24 AC4 10 CYS B 98 ? CYS B 98 . ? 1_555 ? 25 AC4 10 CYS B 101 ? CYS B 101 . ? 1_555 ? 26 AC4 10 HIS B 102 ? HIS B 102 . ? 1_555 ? 27 AC4 10 TYR B 105 ? TYR B 105 . ? 1_555 ? 28 AC4 10 ARG B 106 ? ARG B 106 . ? 1_555 ? 29 AC5 4 HIS A 63 ? HIS A 63 . ? 1_555 ? 30 AC5 4 HIS B 73 ? HIS B 73 . ? 1_555 ? 31 AC5 4 HIS B 77 ? HIS B 77 . ? 1_555 ? 32 AC5 4 HOH I . ? HOH B 301 . ? 1_555 ? # _pdbx_entry_details.entry_id 4JEB _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 SG _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 CYS _pdbx_validate_close_contact.auth_seq_id_1 101 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 CAC _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HEM _pdbx_validate_close_contact.auth_seq_id_2 201 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.08 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CG _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 GLU _pdbx_validate_rmsd_bond.auth_seq_id_1 4 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CD _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 GLU _pdbx_validate_rmsd_bond.auth_seq_id_2 4 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.607 _pdbx_validate_rmsd_bond.bond_target_value 1.515 _pdbx_validate_rmsd_bond.bond_deviation 0.092 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.015 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 47 ? ? -57.39 3.15 2 1 PRO A 53 ? ? -59.40 -9.75 3 1 TRP B 41 ? ? -39.33 -38.87 4 1 LYS B 47 ? ? -59.00 -2.17 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 304 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id H _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HEM CHA C N N 137 HEM CHB C N N 138 HEM CHC C N N 139 HEM CHD C N N 140 HEM C1A C Y N 141 HEM C2A C Y N 142 HEM C3A C Y N 143 HEM C4A C Y N 144 HEM CMA C N N 145 HEM CAA C N N 146 HEM CBA C N N 147 HEM CGA C N N 148 HEM O1A O N N 149 HEM O2A O N N 150 HEM C1B C N N 151 HEM C2B C N N 152 HEM C3B C N N 153 HEM C4B C N N 154 HEM CMB C N N 155 HEM CAB C N N 156 HEM CBB C N N 157 HEM C1C C Y N 158 HEM C2C C Y N 159 HEM C3C C Y N 160 HEM C4C C Y N 161 HEM CMC C N N 162 HEM CAC C N N 163 HEM CBC C N N 164 HEM C1D C N N 165 HEM C2D C N N 166 HEM C3D C N N 167 HEM C4D C N N 168 HEM CMD C N N 169 HEM CAD C N N 170 HEM CBD C N N 171 HEM CGD C N N 172 HEM O1D O N N 173 HEM O2D O N N 174 HEM NA N Y N 175 HEM NB N N N 176 HEM NC N Y N 177 HEM ND N N N 178 HEM FE FE N N 179 HEM HHB H N N 180 HEM HHC H N N 181 HEM HHD H N N 182 HEM HMA H N N 183 HEM HMAA H N N 184 HEM HMAB H N N 185 HEM HAA H N N 186 HEM HAAA H N N 187 HEM HBA H N N 188 HEM HBAA H N N 189 HEM HMB H N N 190 HEM HMBA H N N 191 HEM HMBB H N N 192 HEM HAB H N N 193 HEM HBB H N N 194 HEM HBBA H N N 195 HEM HMC H N N 196 HEM HMCA H N N 197 HEM HMCB H N N 198 HEM HAC H N N 199 HEM HBC H N N 200 HEM HBCA H N N 201 HEM HMD H N N 202 HEM HMDA H N N 203 HEM HMDB H N N 204 HEM HAD H N N 205 HEM HADA H N N 206 HEM HBD H N N 207 HEM HBDA H N N 208 HEM H2A H N N 209 HEM H2D H N N 210 HEM HHA H N N 211 HIS N N N N 212 HIS CA C N S 213 HIS C C N N 214 HIS O O N N 215 HIS CB C N N 216 HIS CG C Y N 217 HIS ND1 N Y N 218 HIS CD2 C Y N 219 HIS CE1 C Y N 220 HIS NE2 N Y N 221 HIS OXT O N N 222 HIS H H N N 223 HIS H2 H N N 224 HIS HA H N N 225 HIS HB2 H N N 226 HIS HB3 H N N 227 HIS HD1 H N N 228 HIS HD2 H N N 229 HIS HE1 H N N 230 HIS HE2 H N N 231 HIS HXT H N N 232 HOH O O N N 233 HOH H1 H N N 234 HOH H2 H N N 235 ILE N N N N 236 ILE CA C N S 237 ILE C C N N 238 ILE O O N N 239 ILE CB C N S 240 ILE CG1 C N N 241 ILE CG2 C N N 242 ILE CD1 C N N 243 ILE OXT O N N 244 ILE H H N N 245 ILE H2 H N N 246 ILE HA H N N 247 ILE HB H N N 248 ILE HG12 H N N 249 ILE HG13 H N N 250 ILE HG21 H N N 251 ILE HG22 H N N 252 ILE HG23 H N N 253 ILE HD11 H N N 254 ILE HD12 H N N 255 ILE HD13 H N N 256 ILE HXT H N N 257 LEU N N N N 258 LEU CA C N S 259 LEU C C N N 260 LEU O O N N 261 LEU CB C N N 262 LEU CG C N N 263 LEU CD1 C N N 264 LEU CD2 C N N 265 LEU OXT O N N 266 LEU H H N N 267 LEU H2 H N N 268 LEU HA H N N 269 LEU HB2 H N N 270 LEU HB3 H N N 271 LEU HG H N N 272 LEU HD11 H N N 273 LEU HD12 H N N 274 LEU HD13 H N N 275 LEU HD21 H N N 276 LEU HD22 H N N 277 LEU HD23 H N N 278 LEU HXT H N N 279 LYS N N N N 280 LYS CA C N S 281 LYS C C N N 282 LYS O O N N 283 LYS CB C N N 284 LYS CG C N N 285 LYS CD C N N 286 LYS CE C N N 287 LYS NZ N N N 288 LYS OXT O N N 289 LYS H H N N 290 LYS H2 H N N 291 LYS HA H N N 292 LYS HB2 H N N 293 LYS HB3 H N N 294 LYS HG2 H N N 295 LYS HG3 H N N 296 LYS HD2 H N N 297 LYS HD3 H N N 298 LYS HE2 H N N 299 LYS HE3 H N N 300 LYS HZ1 H N N 301 LYS HZ2 H N N 302 LYS HZ3 H N N 303 LYS HXT H N N 304 MET N N N N 305 MET CA C N S 306 MET C C N N 307 MET O O N N 308 MET CB C N N 309 MET CG C N N 310 MET SD S N N 311 MET CE C N N 312 MET OXT O N N 313 MET H H N N 314 MET H2 H N N 315 MET HA H N N 316 MET HB2 H N N 317 MET HB3 H N N 318 MET HG2 H N N 319 MET HG3 H N N 320 MET HE1 H N N 321 MET HE2 H N N 322 MET HE3 H N N 323 MET HXT H N N 324 PHE N N N N 325 PHE CA C N S 326 PHE C C N N 327 PHE O O N N 328 PHE CB C N N 329 PHE CG C Y N 330 PHE CD1 C Y N 331 PHE CD2 C Y N 332 PHE CE1 C Y N 333 PHE CE2 C Y N 334 PHE CZ C Y N 335 PHE OXT O N N 336 PHE H H N N 337 PHE H2 H N N 338 PHE HA H N N 339 PHE HB2 H N N 340 PHE HB3 H N N 341 PHE HD1 H N N 342 PHE HD2 H N N 343 PHE HE1 H N N 344 PHE HE2 H N N 345 PHE HZ H N N 346 PHE HXT H N N 347 PRO N N N N 348 PRO CA C N S 349 PRO C C N N 350 PRO O O N N 351 PRO CB C N N 352 PRO CG C N N 353 PRO CD C N N 354 PRO OXT O N N 355 PRO H H N N 356 PRO HA H N N 357 PRO HB2 H N N 358 PRO HB3 H N N 359 PRO HG2 H N N 360 PRO HG3 H N N 361 PRO HD2 H N N 362 PRO HD3 H N N 363 PRO HXT H N N 364 SER N N N N 365 SER CA C N S 366 SER C C N N 367 SER O O N N 368 SER CB C N N 369 SER OG O N N 370 SER OXT O N N 371 SER H H N N 372 SER H2 H N N 373 SER HA H N N 374 SER HB2 H N N 375 SER HB3 H N N 376 SER HG H N N 377 SER HXT H N N 378 THR N N N N 379 THR CA C N S 380 THR C C N N 381 THR O O N N 382 THR CB C N R 383 THR OG1 O N N 384 THR CG2 C N N 385 THR OXT O N N 386 THR H H N N 387 THR H2 H N N 388 THR HA H N N 389 THR HB H N N 390 THR HG1 H N N 391 THR HG21 H N N 392 THR HG22 H N N 393 THR HG23 H N N 394 THR HXT H N N 395 TRP N N N N 396 TRP CA C N S 397 TRP C C N N 398 TRP O O N N 399 TRP CB C N N 400 TRP CG C Y N 401 TRP CD1 C Y N 402 TRP CD2 C Y N 403 TRP NE1 N Y N 404 TRP CE2 C Y N 405 TRP CE3 C Y N 406 TRP CZ2 C Y N 407 TRP CZ3 C Y N 408 TRP CH2 C Y N 409 TRP OXT O N N 410 TRP H H N N 411 TRP H2 H N N 412 TRP HA H N N 413 TRP HB2 H N N 414 TRP HB3 H N N 415 TRP HD1 H N N 416 TRP HE1 H N N 417 TRP HE3 H N N 418 TRP HZ2 H N N 419 TRP HZ3 H N N 420 TRP HH2 H N N 421 TRP HXT H N N 422 TYR N N N N 423 TYR CA C N S 424 TYR C C N N 425 TYR O O N N 426 TYR CB C N N 427 TYR CG C Y N 428 TYR CD1 C Y N 429 TYR CD2 C Y N 430 TYR CE1 C Y N 431 TYR CE2 C Y N 432 TYR CZ C Y N 433 TYR OH O N N 434 TYR OXT O N N 435 TYR H H N N 436 TYR H2 H N N 437 TYR HA H N N 438 TYR HB2 H N N 439 TYR HB3 H N N 440 TYR HD1 H N N 441 TYR HD2 H N N 442 TYR HE1 H N N 443 TYR HE2 H N N 444 TYR HH H N N 445 TYR HXT H N N 446 VAL N N N N 447 VAL CA C N S 448 VAL C C N N 449 VAL O O N N 450 VAL CB C N N 451 VAL CG1 C N N 452 VAL CG2 C N N 453 VAL OXT O N N 454 VAL H H N N 455 VAL H2 H N N 456 VAL HA H N N 457 VAL HB H N N 458 VAL HG11 H N N 459 VAL HG12 H N N 460 VAL HG13 H N N 461 VAL HG21 H N N 462 VAL HG22 H N N 463 VAL HG23 H N N 464 VAL HXT H N N 465 ZN ZN ZN N N 466 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HEM CHA C1A sing N N 129 HEM CHA C4D doub N N 130 HEM CHA HHA sing N N 131 HEM CHB C4A sing N N 132 HEM CHB C1B doub N N 133 HEM CHB HHB sing N N 134 HEM CHC C4B sing N N 135 HEM CHC C1C doub N N 136 HEM CHC HHC sing N N 137 HEM CHD C4C doub N N 138 HEM CHD C1D sing N N 139 HEM CHD HHD sing N N 140 HEM C1A C2A doub Y N 141 HEM C1A NA sing Y N 142 HEM C2A C3A sing Y N 143 HEM C2A CAA sing N N 144 HEM C3A C4A doub Y N 145 HEM C3A CMA sing N N 146 HEM C4A NA sing Y N 147 HEM CMA HMA sing N N 148 HEM CMA HMAA sing N N 149 HEM CMA HMAB sing N N 150 HEM CAA CBA sing N N 151 HEM CAA HAA sing N N 152 HEM CAA HAAA sing N N 153 HEM CBA CGA sing N N 154 HEM CBA HBA sing N N 155 HEM CBA HBAA sing N N 156 HEM CGA O1A doub N N 157 HEM CGA O2A sing N N 158 HEM C1B C2B sing N N 159 HEM C1B NB sing N N 160 HEM C2B C3B doub N N 161 HEM C2B CMB sing N N 162 HEM C3B C4B sing N N 163 HEM C3B CAB sing N N 164 HEM C4B NB doub N N 165 HEM CMB HMB sing N N 166 HEM CMB HMBA sing N N 167 HEM CMB HMBB sing N N 168 HEM CAB CBB doub N N 169 HEM CAB HAB sing N N 170 HEM CBB HBB sing N N 171 HEM CBB HBBA sing N N 172 HEM C1C C2C sing Y N 173 HEM C1C NC sing Y N 174 HEM C2C C3C doub Y N 175 HEM C2C CMC sing N N 176 HEM C3C C4C sing Y N 177 HEM C3C CAC sing N N 178 HEM C4C NC sing Y N 179 HEM CMC HMC sing N N 180 HEM CMC HMCA sing N N 181 HEM CMC HMCB sing N N 182 HEM CAC CBC doub N N 183 HEM CAC HAC sing N N 184 HEM CBC HBC sing N N 185 HEM CBC HBCA sing N N 186 HEM C1D C2D sing N N 187 HEM C1D ND doub N N 188 HEM C2D C3D doub N N 189 HEM C2D CMD sing N N 190 HEM C3D C4D sing N N 191 HEM C3D CAD sing N N 192 HEM C4D ND sing N N 193 HEM CMD HMD sing N N 194 HEM CMD HMDA sing N N 195 HEM CMD HMDB sing N N 196 HEM CAD CBD sing N N 197 HEM CAD HAD sing N N 198 HEM CAD HADA sing N N 199 HEM CBD CGD sing N N 200 HEM CBD HBD sing N N 201 HEM CBD HBDA sing N N 202 HEM CGD O1D doub N N 203 HEM CGD O2D sing N N 204 HEM O2A H2A sing N N 205 HEM O2D H2D sing N N 206 HEM FE NA sing N N 207 HEM FE NB sing N N 208 HEM FE NC sing N N 209 HEM FE ND sing N N 210 HIS N CA sing N N 211 HIS N H sing N N 212 HIS N H2 sing N N 213 HIS CA C sing N N 214 HIS CA CB sing N N 215 HIS CA HA sing N N 216 HIS C O doub N N 217 HIS C OXT sing N N 218 HIS CB CG sing N N 219 HIS CB HB2 sing N N 220 HIS CB HB3 sing N N 221 HIS CG ND1 sing Y N 222 HIS CG CD2 doub Y N 223 HIS ND1 CE1 doub Y N 224 HIS ND1 HD1 sing N N 225 HIS CD2 NE2 sing Y N 226 HIS CD2 HD2 sing N N 227 HIS CE1 NE2 sing Y N 228 HIS CE1 HE1 sing N N 229 HIS NE2 HE2 sing N N 230 HIS OXT HXT sing N N 231 HOH O H1 sing N N 232 HOH O H2 sing N N 233 ILE N CA sing N N 234 ILE N H sing N N 235 ILE N H2 sing N N 236 ILE CA C sing N N 237 ILE CA CB sing N N 238 ILE CA HA sing N N 239 ILE C O doub N N 240 ILE C OXT sing N N 241 ILE CB CG1 sing N N 242 ILE CB CG2 sing N N 243 ILE CB HB sing N N 244 ILE CG1 CD1 sing N N 245 ILE CG1 HG12 sing N N 246 ILE CG1 HG13 sing N N 247 ILE CG2 HG21 sing N N 248 ILE CG2 HG22 sing N N 249 ILE CG2 HG23 sing N N 250 ILE CD1 HD11 sing N N 251 ILE CD1 HD12 sing N N 252 ILE CD1 HD13 sing N N 253 ILE OXT HXT sing N N 254 LEU N CA sing N N 255 LEU N H sing N N 256 LEU N H2 sing N N 257 LEU CA C sing N N 258 LEU CA CB sing N N 259 LEU CA HA sing N N 260 LEU C O doub N N 261 LEU C OXT sing N N 262 LEU CB CG sing N N 263 LEU CB HB2 sing N N 264 LEU CB HB3 sing N N 265 LEU CG CD1 sing N N 266 LEU CG CD2 sing N N 267 LEU CG HG sing N N 268 LEU CD1 HD11 sing N N 269 LEU CD1 HD12 sing N N 270 LEU CD1 HD13 sing N N 271 LEU CD2 HD21 sing N N 272 LEU CD2 HD22 sing N N 273 LEU CD2 HD23 sing N N 274 LEU OXT HXT sing N N 275 LYS N CA sing N N 276 LYS N H sing N N 277 LYS N H2 sing N N 278 LYS CA C sing N N 279 LYS CA CB sing N N 280 LYS CA HA sing N N 281 LYS C O doub N N 282 LYS C OXT sing N N 283 LYS CB CG sing N N 284 LYS CB HB2 sing N N 285 LYS CB HB3 sing N N 286 LYS CG CD sing N N 287 LYS CG HG2 sing N N 288 LYS CG HG3 sing N N 289 LYS CD CE sing N N 290 LYS CD HD2 sing N N 291 LYS CD HD3 sing N N 292 LYS CE NZ sing N N 293 LYS CE HE2 sing N N 294 LYS CE HE3 sing N N 295 LYS NZ HZ1 sing N N 296 LYS NZ HZ2 sing N N 297 LYS NZ HZ3 sing N N 298 LYS OXT HXT sing N N 299 MET N CA sing N N 300 MET N H sing N N 301 MET N H2 sing N N 302 MET CA C sing N N 303 MET CA CB sing N N 304 MET CA HA sing N N 305 MET C O doub N N 306 MET C OXT sing N N 307 MET CB CG sing N N 308 MET CB HB2 sing N N 309 MET CB HB3 sing N N 310 MET CG SD sing N N 311 MET CG HG2 sing N N 312 MET CG HG3 sing N N 313 MET SD CE sing N N 314 MET CE HE1 sing N N 315 MET CE HE2 sing N N 316 MET CE HE3 sing N N 317 MET OXT HXT sing N N 318 PHE N CA sing N N 319 PHE N H sing N N 320 PHE N H2 sing N N 321 PHE CA C sing N N 322 PHE CA CB sing N N 323 PHE CA HA sing N N 324 PHE C O doub N N 325 PHE C OXT sing N N 326 PHE CB CG sing N N 327 PHE CB HB2 sing N N 328 PHE CB HB3 sing N N 329 PHE CG CD1 doub Y N 330 PHE CG CD2 sing Y N 331 PHE CD1 CE1 sing Y N 332 PHE CD1 HD1 sing N N 333 PHE CD2 CE2 doub Y N 334 PHE CD2 HD2 sing N N 335 PHE CE1 CZ doub Y N 336 PHE CE1 HE1 sing N N 337 PHE CE2 CZ sing Y N 338 PHE CE2 HE2 sing N N 339 PHE CZ HZ sing N N 340 PHE OXT HXT sing N N 341 PRO N CA sing N N 342 PRO N CD sing N N 343 PRO N H sing N N 344 PRO CA C sing N N 345 PRO CA CB sing N N 346 PRO CA HA sing N N 347 PRO C O doub N N 348 PRO C OXT sing N N 349 PRO CB CG sing N N 350 PRO CB HB2 sing N N 351 PRO CB HB3 sing N N 352 PRO CG CD sing N N 353 PRO CG HG2 sing N N 354 PRO CG HG3 sing N N 355 PRO CD HD2 sing N N 356 PRO CD HD3 sing N N 357 PRO OXT HXT sing N N 358 SER N CA sing N N 359 SER N H sing N N 360 SER N H2 sing N N 361 SER CA C sing N N 362 SER CA CB sing N N 363 SER CA HA sing N N 364 SER C O doub N N 365 SER C OXT sing N N 366 SER CB OG sing N N 367 SER CB HB2 sing N N 368 SER CB HB3 sing N N 369 SER OG HG sing N N 370 SER OXT HXT sing N N 371 THR N CA sing N N 372 THR N H sing N N 373 THR N H2 sing N N 374 THR CA C sing N N 375 THR CA CB sing N N 376 THR CA HA sing N N 377 THR C O doub N N 378 THR C OXT sing N N 379 THR CB OG1 sing N N 380 THR CB CG2 sing N N 381 THR CB HB sing N N 382 THR OG1 HG1 sing N N 383 THR CG2 HG21 sing N N 384 THR CG2 HG22 sing N N 385 THR CG2 HG23 sing N N 386 THR OXT HXT sing N N 387 TRP N CA sing N N 388 TRP N H sing N N 389 TRP N H2 sing N N 390 TRP CA C sing N N 391 TRP CA CB sing N N 392 TRP CA HA sing N N 393 TRP C O doub N N 394 TRP C OXT sing N N 395 TRP CB CG sing N N 396 TRP CB HB2 sing N N 397 TRP CB HB3 sing N N 398 TRP CG CD1 doub Y N 399 TRP CG CD2 sing Y N 400 TRP CD1 NE1 sing Y N 401 TRP CD1 HD1 sing N N 402 TRP CD2 CE2 doub Y N 403 TRP CD2 CE3 sing Y N 404 TRP NE1 CE2 sing Y N 405 TRP NE1 HE1 sing N N 406 TRP CE2 CZ2 sing Y N 407 TRP CE3 CZ3 doub Y N 408 TRP CE3 HE3 sing N N 409 TRP CZ2 CH2 doub Y N 410 TRP CZ2 HZ2 sing N N 411 TRP CZ3 CH2 sing Y N 412 TRP CZ3 HZ3 sing N N 413 TRP CH2 HH2 sing N N 414 TRP OXT HXT sing N N 415 TYR N CA sing N N 416 TYR N H sing N N 417 TYR N H2 sing N N 418 TYR CA C sing N N 419 TYR CA CB sing N N 420 TYR CA HA sing N N 421 TYR C O doub N N 422 TYR C OXT sing N N 423 TYR CB CG sing N N 424 TYR CB HB2 sing N N 425 TYR CB HB3 sing N N 426 TYR CG CD1 doub Y N 427 TYR CG CD2 sing Y N 428 TYR CD1 CE1 sing Y N 429 TYR CD1 HD1 sing N N 430 TYR CD2 CE2 doub Y N 431 TYR CD2 HD2 sing N N 432 TYR CE1 CZ doub Y N 433 TYR CE1 HE1 sing N N 434 TYR CE2 CZ sing Y N 435 TYR CE2 HE2 sing N N 436 TYR CZ OH sing N N 437 TYR OH HH sing N N 438 TYR OXT HXT sing N N 439 VAL N CA sing N N 440 VAL N H sing N N 441 VAL N H2 sing N N 442 VAL CA C sing N N 443 VAL CA CB sing N N 444 VAL CA HA sing N N 445 VAL C O doub N N 446 VAL C OXT sing N N 447 VAL CB CG1 sing N N 448 VAL CB CG2 sing N N 449 VAL CB HB sing N N 450 VAL CG1 HG11 sing N N 451 VAL CG1 HG12 sing N N 452 VAL CG1 HG13 sing N N 453 VAL CG2 HG21 sing N N 454 VAL CG2 HG22 sing N N 455 VAL CG2 HG23 sing N N 456 VAL OXT HXT sing N N 457 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3IQ6 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 4JEB _atom_sites.fract_transf_matrix[1][1] 0.018201 _atom_sites.fract_transf_matrix[1][2] 0.010508 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021017 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006865 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C FE N O S ZN # loop_