HEADER TRANSFERASE 01-MAR-13 4JGO TITLE THE CRYSTAL STRUCTURE OF SPORULATION KINASE D SENSOR DOMAIN FROM TITLE 2 BACILLUS SUBTILIS SUBSP. COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPORULATION KINASE D; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: SENSOR DOMAIN (UNP RESIDUES 37-250); COMPND 5 SYNONYM: SENSOR HISTIDINE KINASE D; COMPND 6 EC: 2.7.13.3; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS SUBSP. SUBTILIS; SOURCE 3 ORGANISM_TAXID: 224308; SOURCE 4 STRAIN: 168; SOURCE 5 GENE: BSU13660, KIND, YKVD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS PAS-LIKE FOLD, HISTIDINE KINASE, EXTRACYTOPLASMIC, ALPHA-BETA-ALPHA KEYWDS 2 STRUCTURE, STRUCTURAL GENOMICS, MIDWEST CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, MCSG, PSI-BIOLOGY, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.WU,M.SCHIFFER,M.GU,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 2 15-NOV-23 4JGO 1 REMARK SEQADV LINK ATOM REVDAT 1 15-MAY-13 4JGO 0 SPRSDE 15-MAY-13 4JGO 4DBJ JRNL AUTH R.WU,M.GU,R.WILTON,G.BABNIGG,Y.KIM,P.R.POKKULURI,H.SZURMANT, JRNL AUTH 2 A.JOACHIMIAK,M.SCHIFFER JRNL TITL INSIGHT INTO THE SPORULATION PHOSPHORELAY: CRYSTAL STRUCTURE JRNL TITL 2 OF THE SENSOR DOMAIN OF BACILLUS SUBTILIS HISTIDINE KINASE, JRNL TITL 3 KIND. JRNL REF PROTEIN SCI. V. 22 564 2013 JRNL REFN ISSN 0961-8368 JRNL PMID 23436677 JRNL DOI 10.1002/PRO.2237 REMARK 2 REMARK 2 RESOLUTION. 2.28 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.28 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.28 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 24870 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1335 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.2815 - 4.9065 0.99 2689 123 0.1796 0.2234 REMARK 3 2 4.9065 - 3.8959 1.00 2567 137 0.1465 0.1714 REMARK 3 3 3.8959 - 3.4039 1.00 2536 139 0.2016 0.2328 REMARK 3 4 3.4039 - 3.0928 1.00 2521 130 0.2023 0.2850 REMARK 3 5 3.0928 - 2.8713 1.00 2518 128 0.2132 0.2674 REMARK 3 6 2.8713 - 2.7020 1.00 2499 136 0.2215 0.2777 REMARK 3 7 2.7020 - 2.5668 1.00 2475 137 0.2041 0.2845 REMARK 3 8 2.5668 - 2.4550 0.99 2455 150 0.2071 0.2990 REMARK 3 9 2.4550 - 2.3606 0.98 2429 141 0.2167 0.2689 REMARK 3 10 2.3606 - 2.2791 0.86 2159 114 0.2131 0.2844 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 45.15 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.700 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.260 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.52 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.04650 REMARK 3 B22 (A**2) : -2.42990 REMARK 3 B33 (A**2) : -3.61650 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3387 REMARK 3 ANGLE : 1.144 4566 REMARK 3 CHIRALITY : 0.072 532 REMARK 3 PLANARITY : 0.005 575 REMARK 3 DIHEDRAL : 15.572 1277 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 39:182 ) REMARK 3 ORIGIN FOR THE GROUP (A): 72.476 63.349 -21.215 REMARK 3 T TENSOR REMARK 3 T11: 0.2945 T22: 0.2259 REMARK 3 T33: 0.1246 T12: 0.1502 REMARK 3 T13: -0.0149 T23: -0.0685 REMARK 3 L TENSOR REMARK 3 L11: 2.3495 L22: 2.3925 REMARK 3 L33: 1.2756 L12: -1.8507 REMARK 3 L13: 0.4276 L23: -0.6811 REMARK 3 S TENSOR REMARK 3 S11: 0.5319 S12: 0.4725 S13: -0.2017 REMARK 3 S21: -0.5167 S22: -0.4372 S23: 0.1359 REMARK 3 S31: -0.2011 S32: -0.2007 S33: -0.0461 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 183:244 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.768 78.360 -24.493 REMARK 3 T TENSOR REMARK 3 T11: 0.1661 T22: 0.2229 REMARK 3 T33: 0.2352 T12: 0.0281 REMARK 3 T13: 0.0050 T23: 0.0399 REMARK 3 L TENSOR REMARK 3 L11: 1.7742 L22: 3.2280 REMARK 3 L33: 2.4230 L12: -1.2160 REMARK 3 L13: 0.4163 L23: -0.2628 REMARK 3 S TENSOR REMARK 3 S11: -0.0951 S12: 0.0458 S13: -0.2186 REMARK 3 S21: 0.1002 S22: 0.0996 S23: 0.6404 REMARK 3 S31: -0.1098 S32: -0.2794 S33: 0.0501 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN B AND RESID 0:182 ) REMARK 3 ORIGIN FOR THE GROUP (A): 71.592 64.964 2.605 REMARK 3 T TENSOR REMARK 3 T11: 0.1289 T22: 0.1415 REMARK 3 T33: 0.1462 T12: -0.0283 REMARK 3 T13: 0.0035 T23: 0.0104 REMARK 3 L TENSOR REMARK 3 L11: 2.7876 L22: 2.3796 REMARK 3 L33: 1.8888 L12: -1.9780 REMARK 3 L13: -0.0371 L23: 0.0536 REMARK 3 S TENSOR REMARK 3 S11: 0.0195 S12: -0.0162 S13: -0.0977 REMARK 3 S21: 0.0383 S22: -0.0164 S23: -0.0823 REMARK 3 S31: 0.0375 S32: -0.0754 S33: 0.0220 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN B AND RESID 183:245 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.559 84.115 5.563 REMARK 3 T TENSOR REMARK 3 T11: 0.2146 T22: 0.1667 REMARK 3 T33: 0.2090 T12: -0.0009 REMARK 3 T13: 0.0072 T23: -0.0343 REMARK 3 L TENSOR REMARK 3 L11: 2.9894 L22: 2.6738 REMARK 3 L33: 2.9413 L12: -1.6058 REMARK 3 L13: -0.7085 L23: -0.0725 REMARK 3 S TENSOR REMARK 3 S11: 0.0443 S12: -0.0378 S13: 0.4040 REMARK 3 S21: 0.0549 S22: 0.0258 S23: -0.4077 REMARK 3 S31: -0.3524 S32: -0.0351 S33: -0.0711 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4JGO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000078022. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97926 REMARK 200 MONOCHROMATOR : SI 111, CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24870 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.13300 REMARK 200 FOR THE DATA SET : 14.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.52400 REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES AND 25% (W/V) PEG 1000, PH REMARK 280 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.05350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.18750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.26650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.18750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.05350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.26650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 34 REMARK 465 ASN A 35 REMARK 465 ALA A 36 REMARK 465 GLU A 37 REMARK 465 LYS A 38 REMARK 465 GLU A 245 REMARK 465 LEU A 246 REMARK 465 SER A 247 REMARK 465 LYS A 248 REMARK 465 SER A 249 REMARK 465 LEU A 250 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 LEU B 246 REMARK 465 SER B 247 REMARK 465 LYS B 248 REMARK 465 SER B 249 REMARK 465 LEU B 250 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 245 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 193 67.03 -119.76 REMARK 500 ASP B 167 -158.34 -99.26 REMARK 500 SER B 231 46.75 -91.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PYR A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PYR B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 307 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC106683 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: 4JGP RELATED DB: PDB REMARK 900 RELATED ID: 4JGQ RELATED DB: PDB REMARK 900 RELATED ID: 4JGR RELATED DB: PDB DBREF 4JGO A 37 250 UNP O31671 KIND_BACSU 37 250 DBREF 4JGO B 37 250 UNP O31671 KIND_BACSU 37 250 SEQADV 4JGO SER A 34 UNP O31671 EXPRESSION TAG SEQADV 4JGO ASN A 35 UNP O31671 EXPRESSION TAG SEQADV 4JGO ALA A 36 UNP O31671 EXPRESSION TAG SEQADV 4JGO SER B -2 UNP O31671 EXPRESSION TAG SEQADV 4JGO ASN B -1 UNP O31671 EXPRESSION TAG SEQADV 4JGO ALA B 0 UNP O31671 EXPRESSION TAG SEQRES 1 A 217 SER ASN ALA GLU LYS GLU LYS ASP THR ILE ALA ALA GLU SEQRES 2 A 217 HIS LYS GLN GLU ALA SER VAL LEU LEU ASN LEU HIS ARG SEQRES 3 A 217 ASN LYS ILE ASN TYR LEU ILE GLY GLU THR MSE ALA ARG SEQRES 4 A 217 MSE THR SER LEU SER ILE ALA ILE ASP ARG PRO VAL ASP SEQRES 5 A 217 ILE LYS LYS MSE GLN SER ILE LEU GLU LYS THR PHE ASP SEQRES 6 A 217 SER GLU PRO ARG PHE SER GLY LEU TYR PHE LEU ASN ALA SEQRES 7 A 217 LYS GLY ASP VAL THR ALA SER THR THR GLU LEU LYS THR SEQRES 8 A 217 LYS VAL ASN LEU ALA ASP ARG SER PHE PHE ILE LYS ALA SEQRES 9 A 217 LYS GLU THR LYS LYS THR VAL ILE SER ASP SER TYR SER SEQRES 10 A 217 SER ARG ILE THR GLY GLN PRO ILE PHE THR ILE CYS VAL SEQRES 11 A 217 PRO VAL LEU ASP SER LYS ARG ASN VAL THR ASP TYR LEU SEQRES 12 A 217 VAL ALA ALA ILE GLN ILE ASP TYR LEU LYS ASN LEU ILE SEQRES 13 A 217 ASN LEU LEU SER PRO ASP VAL TYR ILE GLU VAL VAL ASN SEQRES 14 A 217 GLN ASP GLY LYS MSE ILE PHE ALA SER GLY GLN ALA SER SEQRES 15 A 217 HIS ALA GLU ASP GLN LYS PRO VAL SER GLY TYR LEU ASP SEQRES 16 A 217 ASP ILE SER TRP ASN MSE LYS VAL TYR PRO ASN PRO VAL SEQRES 17 A 217 THR ILE GLU GLU LEU SER LYS SER LEU SEQRES 1 B 217 SER ASN ALA GLU LYS GLU LYS ASP THR ILE ALA ALA GLU SEQRES 2 B 217 HIS LYS GLN GLU ALA SER VAL LEU LEU ASN LEU HIS ARG SEQRES 3 B 217 ASN LYS ILE ASN TYR LEU ILE GLY GLU THR MSE ALA ARG SEQRES 4 B 217 MSE THR SER LEU SER ILE ALA ILE ASP ARG PRO VAL ASP SEQRES 5 B 217 ILE LYS LYS MSE GLN SER ILE LEU GLU LYS THR PHE ASP SEQRES 6 B 217 SER GLU PRO ARG PHE SER GLY LEU TYR PHE LEU ASN ALA SEQRES 7 B 217 LYS GLY ASP VAL THR ALA SER THR THR GLU LEU LYS THR SEQRES 8 B 217 LYS VAL ASN LEU ALA ASP ARG SER PHE PHE ILE LYS ALA SEQRES 9 B 217 LYS GLU THR LYS LYS THR VAL ILE SER ASP SER TYR SER SEQRES 10 B 217 SER ARG ILE THR GLY GLN PRO ILE PHE THR ILE CYS VAL SEQRES 11 B 217 PRO VAL LEU ASP SER LYS ARG ASN VAL THR ASP TYR LEU SEQRES 12 B 217 VAL ALA ALA ILE GLN ILE ASP TYR LEU LYS ASN LEU ILE SEQRES 13 B 217 ASN LEU LEU SER PRO ASP VAL TYR ILE GLU VAL VAL ASN SEQRES 14 B 217 GLN ASP GLY LYS MSE ILE PHE ALA SER GLY GLN ALA SER SEQRES 15 B 217 HIS ALA GLU ASP GLN LYS PRO VAL SER GLY TYR LEU ASP SEQRES 16 B 217 ASP ILE SER TRP ASN MSE LYS VAL TYR PRO ASN PRO VAL SEQRES 17 B 217 THR ILE GLU GLU LEU SER LYS SER LEU MODRES 4JGO MSE A 70 MET SELENOMETHIONINE MODRES 4JGO MSE A 73 MET SELENOMETHIONINE MODRES 4JGO MSE A 89 MET SELENOMETHIONINE MODRES 4JGO MSE A 207 MET SELENOMETHIONINE MODRES 4JGO MSE A 234 MET SELENOMETHIONINE MODRES 4JGO MSE B 70 MET SELENOMETHIONINE MODRES 4JGO MSE B 73 MET SELENOMETHIONINE MODRES 4JGO MSE B 89 MET SELENOMETHIONINE MODRES 4JGO MSE B 207 MET SELENOMETHIONINE MODRES 4JGO MSE B 234 MET SELENOMETHIONINE HET MSE A 70 8 HET MSE A 73 8 HET MSE A 89 8 HET MSE A 207 8 HET MSE A 234 8 HET MSE B 70 8 HET MSE B 73 8 HET MSE B 89 8 HET MSE B 207 8 HET MSE B 234 8 HET PYR A 301 6 HET GOL A 302 6 HET GOL A 303 6 HET GOL A 304 6 HET PYR B 301 6 HET GOL B 302 6 HET GOL B 303 6 HET GOL B 304 6 HET GOL B 305 6 HET GOL B 306 6 HET GOL B 307 6 HETNAM MSE SELENOMETHIONINE HETNAM PYR PYRUVIC ACID HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 3 PYR 2(C3 H4 O3) FORMUL 4 GOL 9(C3 H8 O3) FORMUL 14 HOH *153(H2 O) HELIX 1 1 LYS A 40 ILE A 80 1 41 HELIX 2 2 ASP A 85 ASP A 98 1 14 HELIX 3 3 ARG A 131 LYS A 141 1 11 HELIX 4 4 ILE A 182 SER A 193 1 12 HELIX 5 5 GLN A 213 GLU A 218 5 6 HELIX 6 6 GLU B 37 ILE B 80 1 44 HELIX 7 7 ASP B 85 ASP B 98 1 14 HELIX 8 8 ARG B 131 LYS B 141 1 11 HELIX 9 9 ILE B 182 SER B 193 1 12 HELIX 10 10 GLN B 213 GLU B 218 5 6 SHEET 1 A 5 VAL A 115 SER A 118 0 SHEET 2 A 5 PHE A 103 ASN A 110 -1 N PHE A 108 O THR A 116 SHEET 3 A 5 VAL A 172 GLN A 181 -1 O ALA A 179 N SER A 104 SHEET 4 A 5 PRO A 157 LEU A 166 -1 N ILE A 161 O ALA A 178 SHEET 5 A 5 VAL A 144 ILE A 145 -1 N VAL A 144 O CYS A 162 SHEET 1 B 5 VAL A 115 SER A 118 0 SHEET 2 B 5 PHE A 103 ASN A 110 -1 N PHE A 108 O THR A 116 SHEET 3 B 5 VAL A 172 GLN A 181 -1 O ALA A 179 N SER A 104 SHEET 4 B 5 PRO A 157 LEU A 166 -1 N ILE A 161 O ALA A 178 SHEET 5 B 5 TYR A 149 SER A 150 -1 N TYR A 149 O ILE A 158 SHEET 1 C 4 MSE A 207 SER A 211 0 SHEET 2 C 4 TYR A 197 ASN A 202 -1 N VAL A 200 O ILE A 208 SHEET 3 C 4 TRP A 232 TYR A 237 -1 O ASN A 233 N VAL A 201 SHEET 4 C 4 VAL A 223 TYR A 226 -1 N VAL A 223 O VAL A 236 SHEET 1 D 5 VAL B 115 SER B 118 0 SHEET 2 D 5 PHE B 103 LEU B 109 -1 N PHE B 108 O THR B 116 SHEET 3 D 5 VAL B 172 GLN B 181 -1 O VAL B 177 N TYR B 107 SHEET 4 D 5 PRO B 157 LEU B 166 -1 N VAL B 165 O ASP B 174 SHEET 5 D 5 VAL B 144 ILE B 145 -1 N VAL B 144 O CYS B 162 SHEET 1 E 5 VAL B 115 SER B 118 0 SHEET 2 E 5 PHE B 103 LEU B 109 -1 N PHE B 108 O THR B 116 SHEET 3 E 5 VAL B 172 GLN B 181 -1 O VAL B 177 N TYR B 107 SHEET 4 E 5 PRO B 157 LEU B 166 -1 N VAL B 165 O ASP B 174 SHEET 5 E 5 TYR B 149 SER B 150 -1 N TYR B 149 O ILE B 158 SHEET 1 F 4 MSE B 207 SER B 211 0 SHEET 2 F 4 ILE B 198 VAL B 201 -1 N VAL B 200 O ILE B 208 SHEET 3 F 4 ASN B 233 VAL B 236 -1 O ASN B 233 N VAL B 201 SHEET 4 F 4 VAL B 223 TYR B 226 -1 N VAL B 223 O VAL B 236 LINK C THR A 69 N MSE A 70 1555 1555 1.33 LINK C MSE A 70 N ALA A 71 1555 1555 1.33 LINK C ARG A 72 N MSE A 73 1555 1555 1.34 LINK C MSE A 73 N THR A 74 1555 1555 1.33 LINK C LYS A 88 N MSE A 89 1555 1555 1.33 LINK C MSE A 89 N GLN A 90 1555 1555 1.33 LINK C LYS A 206 N MSE A 207 1555 1555 1.33 LINK C MSE A 207 N ILE A 208 1555 1555 1.33 LINK C ASN A 233 N MSE A 234 1555 1555 1.33 LINK C MSE A 234 N LYS A 235 1555 1555 1.33 LINK C THR B 69 N MSE B 70 1555 1555 1.33 LINK C MSE B 70 N ALA B 71 1555 1555 1.33 LINK C ARG B 72 N MSE B 73 1555 1555 1.33 LINK C MSE B 73 N THR B 74 1555 1555 1.33 LINK C LYS B 88 N MSE B 89 1555 1555 1.33 LINK C MSE B 89 N GLN B 90 1555 1555 1.32 LINK C LYS B 206 N MSE B 207 1555 1555 1.32 LINK C MSE B 207 N ILE B 208 1555 1555 1.32 LINK C ASN B 233 N MSE B 234 1555 1555 1.33 LINK C MSE B 234 N LYS B 235 1555 1555 1.32 CISPEP 1 ARG A 82 PRO A 83 0 -0.93 CISPEP 2 ARG B 82 PRO B 83 0 0.34 CISPEP 3 GLU B 244 GLU B 245 0 1.30 SITE 1 AC1 5 ARG A 131 TYR A 149 SER A 151 ARG A 152 SITE 2 AC1 5 ILE A 158 SITE 1 AC2 7 ARG A 82 PRO A 83 VAL A 84 LEU A 166 SITE 2 AC2 7 ASP A 167 THR A 173 GOL A 303 SITE 1 AC3 3 VAL A 84 ASP A 174 GOL A 302 SITE 1 AC4 7 GLU A 199 LYS A 235 TYR A 237 GLU B 199 SITE 2 AC4 7 VAL B 201 GLY B 205 LYS B 235 SITE 1 AC5 7 LEU B 128 ARG B 131 TYR B 149 SER B 151 SITE 2 AC5 7 ARG B 152 ILE B 158 HOH B 418 SITE 1 AC6 6 TYR A 64 ASN B 63 GLY B 67 ASP B 228 SITE 2 AC6 6 ASP B 229 HOH B 427 SITE 1 AC7 7 LYS B 87 LYS B 88 TYR B 226 LEU B 227 SITE 2 AC7 7 ASP B 228 ILE B 230 SER B 231 SITE 1 AC8 4 ASN B 56 ARG B 59 ASN B 60 HOH B 416 SITE 1 AC9 6 ARG B 131 SER B 132 PHE B 133 SER B 146 SITE 2 AC9 6 ASP B 147 HOH B 429 SITE 1 BC1 4 SER A 168 ASN B 202 GLN B 203 SER B 231 SITE 1 BC2 8 ALA A 79 ASP A 81 ALA B 79 ILE B 80 SITE 2 BC2 8 ASP B 81 VAL B 84 ASP B 85 LYS B 88 CRYST1 76.107 82.533 90.375 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013139 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012116 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011065 0.00000