HEADER PLANT PROTEIN 05-MAR-13 4JHG TITLE CRYSTAL STRUCTURE OF MEDICAGO TRUNCATULA NODULIN 13 (MTN13) IN COMPLEX TITLE 2 WITH TRANS-ZEATIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: MTN13 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MEDICAGO TRUNCATULA; SOURCE 3 ORGANISM_COMMON: BARREL MEDIC; SOURCE 4 ORGANISM_TAXID: 3880; SOURCE 5 GENE: MTN13; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET TOPO 151D KEYWDS PR-10 FOLD, NODULIN, NODULATION, LEGUME-BACTERIA SYMBIOSIS, NITROGEN KEYWDS 2 FIXATION, CYTOKININ BINDING, PLANT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.RUSZKOWSKI,K.TUSNIO,A.CIESIELSKA,K.BRZEZINSKI,M.DAUTER,Z.DAUTER, AUTHOR 2 M.SIKORSKI,M.JASKOLSKI REVDAT 5 20-SEP-23 4JHG 1 REMARK SEQADV LINK REVDAT 4 15-NOV-17 4JHG 1 REMARK REVDAT 3 15-JAN-14 4JHG 1 JRNL REVDAT 2 04-DEC-13 4JHG 1 JRNL REVDAT 1 20-MAR-13 4JHG 0 SPRSDE 20-MAR-13 4JHG 3RWS JRNL AUTH M.RUSZKOWSKI,K.SZPOTKOWSKI,M.SIKORSKI,M.JASKOLSKI JRNL TITL THE LANDSCAPE OF CYTOKININ BINDING BY A PLANT NODULIN. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 69 2365 2013 JRNL REFN ISSN 0907-4449 JRNL PMID 24311578 JRNL DOI 10.1107/S0907444913021975 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH H.FERNANDES,K.MICHALSKA,M.SIKORSKI,M.JASKOLSKI REMARK 1 TITL STRUCTURAL AND FUNCTIONAL ASPECTS OF PR-10 PROTEINS. REMARK 1 REF FEBS J. V. 280 1169 2013 REMARK 1 REFN ISSN 1742-464X REMARK 1 PMID 23289796 REMARK 1 DOI 10.1111/FEBS.12114 REMARK 1 REFERENCE 2 REMARK 1 AUTH H.FERNANDES,O.PASTERNAK,G.BUJACZ,A.BUJACZ,M.M.SIKORSKI, REMARK 1 AUTH 2 M.JASKOLSKI REMARK 1 TITL LUPINUS LUTEUS PATHOGENESIS-RELATED PROTEIN AS A RESERVOIR REMARK 1 TITL 2 FOR CYTOKININ. REMARK 1 REF J.MOL.BIOL. V. 378 1040 2008 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 18406424 REMARK 1 DOI 10.1016/J.JMB.2008.03.027 REMARK 1 REFERENCE 3 REMARK 1 AUTH H.FERNANDES,A.BUJACZ,G.BUJACZ,F.JELEN,M.JASINSKI, REMARK 1 AUTH 2 P.KACHLICKI,J.OTLEWSKI,M.M.SIKORSKI,M.JASKOLSKI REMARK 1 TITL CYTOKININ-INDUCED STRUCTURAL ADAPTABILITY OF A LUPINUS REMARK 1 TITL 2 LUTEUS PR-10 PROTEIN. REMARK 1 REF FEBS J. V. 276 1596 2009 REMARK 1 REFN ISSN 1742-464X REMARK 1 PMID 19220853 REMARK 1 DOI 10.1111/J.1742-4658.2009.06892.X REMARK 1 REFERENCE 4 REMARK 1 AUTH O.PASTERNAK,G.D.BUJACZ,Y.FUJIMOTO,Y.HASHIMOTO,F.JELEN, REMARK 1 AUTH 2 J.OTLEWSKI,M.M.SIKORSKI,M.JASKOLSKI REMARK 1 TITL CRYSTAL STRUCTURE OF VIGNA RADIATA CYTOKININ-SPECIFIC REMARK 1 TITL 2 BINDING PROTEIN IN COMPLEX WITH ZEATIN. REMARK 1 REF PLANT CELL V. 18 2622 2006 REMARK 1 REFN ISSN 1040-4651 REMARK 1 PMID 16998071 REMARK 1 DOI 10.1105/TPC.105.037119 REMARK 1 REFERENCE 5 REMARK 1 AUTH P.GAMAS,F.DE BILLY,G.TRUCHET REMARK 1 TITL SYMBIOSIS-SPECIFIC EXPRESSION OF TWO MEDICAGO TRUNCATULA REMARK 1 TITL 2 NODULIN GENES, MTN1 AND MTN13, ENCODING PRODUCTS HOMOLOGOUS REMARK 1 TITL 3 TO PLANT DEFENSE PROTEINS. REMARK 1 REF MOL.PLANT MICROBE INTERACT. V. 11 393 1998 REMARK 1 REFN ISSN 0894-0282 REMARK 1 PMID 9574507 REMARK 1 DOI 10.1094/MPMI.1998.11.5.393 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 26803 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1349 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.9200 - 3.9900 1.00 2763 140 0.1644 0.1931 REMARK 3 2 3.9900 - 3.1700 1.00 2619 128 0.1628 0.1815 REMARK 3 3 3.1700 - 2.7700 1.00 2555 141 0.1990 0.2449 REMARK 3 4 2.7700 - 2.5100 1.00 2527 145 0.2069 0.2535 REMARK 3 5 2.5100 - 2.3300 1.00 2523 145 0.1903 0.2607 REMARK 3 6 2.3300 - 2.2000 1.00 2503 136 0.1878 0.2208 REMARK 3 7 2.2000 - 2.0900 1.00 2485 149 0.1894 0.2019 REMARK 3 8 2.0900 - 2.0000 1.00 2500 128 0.2073 0.2469 REMARK 3 9 2.0000 - 1.9200 1.00 2497 114 0.2244 0.2393 REMARK 3 10 1.9200 - 1.8500 0.99 2482 123 0.2530 0.2791 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.920 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.019 1372 REMARK 3 ANGLE : 1.578 1861 REMARK 3 CHIRALITY : 0.095 202 REMARK 3 PLANARITY : 0.011 238 REMARK 3 DIHEDRAL : 15.988 516 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID -4:12 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.3836 2.5944 8.1020 REMARK 3 T TENSOR REMARK 3 T11: 0.3171 T22: 0.1414 REMARK 3 T33: 0.3193 T12: 0.0056 REMARK 3 T13: 0.0147 T23: -0.0289 REMARK 3 L TENSOR REMARK 3 L11: 3.9787 L22: 3.7470 REMARK 3 L33: 5.2407 L12: -2.7331 REMARK 3 L13: 4.0291 L23: -1.2451 REMARK 3 S TENSOR REMARK 3 S11: -0.1671 S12: -0.0482 S13: -0.0514 REMARK 3 S21: 0.2693 S22: 0.1541 S23: -0.2040 REMARK 3 S31: -0.0655 S32: -0.0202 S33: -0.0022 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 13:34 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.4998 19.6073 -1.0304 REMARK 3 T TENSOR REMARK 3 T11: 0.4582 T22: 0.4380 REMARK 3 T33: 0.4355 T12: 0.1868 REMARK 3 T13: -0.1421 T23: 0.0257 REMARK 3 L TENSOR REMARK 3 L11: 5.2764 L22: 8.7933 REMARK 3 L33: 4.0054 L12: 1.1664 REMARK 3 L13: -2.4228 L23: 2.5522 REMARK 3 S TENSOR REMARK 3 S11: -0.1754 S12: 0.4774 S13: 0.0582 REMARK 3 S21: -0.7393 S22: 0.1838 S23: 0.6132 REMARK 3 S31: -0.7763 S32: -0.4610 S33: 0.0298 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 35:74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.4575 23.1951 5.8900 REMARK 3 T TENSOR REMARK 3 T11: 0.4268 T22: 0.2357 REMARK 3 T33: 0.2830 T12: 0.1220 REMARK 3 T13: -0.0196 T23: 0.0324 REMARK 3 L TENSOR REMARK 3 L11: 2.7271 L22: 3.6600 REMARK 3 L33: 5.1657 L12: -1.4368 REMARK 3 L13: -1.7931 L23: 2.3978 REMARK 3 S TENSOR REMARK 3 S11: -0.0593 S12: -0.0395 S13: 0.2302 REMARK 3 S21: -0.1181 S22: 0.1154 S23: 0.0652 REMARK 3 S31: -0.5594 S32: -0.2488 S33: -0.0845 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESID 75:106 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.9483 11.9926 5.5839 REMARK 3 T TENSOR REMARK 3 T11: 0.2694 T22: 0.1225 REMARK 3 T33: 0.2158 T12: 0.0698 REMARK 3 T13: 0.0558 T23: 0.0397 REMARK 3 L TENSOR REMARK 3 L11: 8.2807 L22: 3.7309 REMARK 3 L33: 5.3328 L12: 1.2856 REMARK 3 L13: 3.4518 L23: 1.8974 REMARK 3 S TENSOR REMARK 3 S11: -0.3532 S12: -0.0982 S13: -0.0720 REMARK 3 S21: 0.0394 S22: 0.2365 S23: 0.2143 REMARK 3 S31: -0.3296 S32: -0.0989 S33: 0.0792 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESID 107:122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.9000 5.6256 1.7274 REMARK 3 T TENSOR REMARK 3 T11: 0.2869 T22: 0.3587 REMARK 3 T33: 0.4321 T12: 0.0221 REMARK 3 T13: -0.0009 T23: 0.0385 REMARK 3 L TENSOR REMARK 3 L11: 0.0415 L22: 3.8433 REMARK 3 L33: 1.0591 L12: 0.3832 REMARK 3 L13: 0.0726 L23: 0.9589 REMARK 3 S TENSOR REMARK 3 S11: -0.2137 S12: -0.1168 S13: -0.4792 REMARK 3 S21: -0.2080 S22: 0.1380 S23: 0.7077 REMARK 3 S31: -0.2831 S32: -0.5473 S33: 0.0650 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND (RESID 123:158 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.3268 11.5931 10.5159 REMARK 3 T TENSOR REMARK 3 T11: 0.4843 T22: 0.3654 REMARK 3 T33: 0.3692 T12: 0.0667 REMARK 3 T13: -0.0007 T23: -0.0646 REMARK 3 L TENSOR REMARK 3 L11: 8.1938 L22: 4.8301 REMARK 3 L33: 3.4102 L12: -4.0520 REMARK 3 L13: 3.7141 L23: -2.1452 REMARK 3 S TENSOR REMARK 3 S11: -0.1234 S12: 0.2308 S13: 0.0429 REMARK 3 S21: 0.4036 S22: -0.1102 S23: 0.0337 REMARK 3 S31: -0.0796 S32: 0.0515 S33: 0.2430 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGEN ATOMS WERE ADDED AT RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4JHG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000078050. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : FOCUSING MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26831 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.50 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.90 REMARK 200 R MERGE FOR SHELL (I) : 0.98100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2QIM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.9 M SODIUM MALONATE, 200 MM NACL, 50 REMARK 280 MM TRIS-HCL, PROTEIN WAS INCUBATED OVERNIGHT WITH TRANS-ZEATIN REMARK 280 PRIOR TO CRYSTALLIZATION, PH 8.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.49600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.74800 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 75.49600 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 37.74800 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 75.49600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 37.74800 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 75.49600 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 37.74800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -81.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 37.74800 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 159 REMARK 465 LYS A 160 REMARK 465 ASP A 161 REMARK 465 SER A 162 REMARK 465 ASN A 163 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 205 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 0 O REMARK 620 2 GLY A 124 O 82.2 REMARK 620 3 HOH A 302 O 99.2 89.1 REMARK 620 4 HOH A 416 O 85.0 84.7 172.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 203 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE A 59 O REMARK 620 2 GLY A 61 O 91.1 REMARK 620 3 HOH A 345 O 170.0 81.4 REMARK 620 4 HOH A 346 O 93.0 93.0 80.8 REMARK 620 5 HOH A 347 O 92.9 97.9 94.7 167.5 REMARK 620 6 HOH A 348 O 103.7 153.7 80.9 65.1 102.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 204 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 65 O REMARK 620 2 THR A 66 OG1 81.1 REMARK 620 3 HOH A 328 O 91.2 115.9 REMARK 620 4 HOH A 395 O 101.7 80.2 161.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZEA A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 205 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4GY9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MEDICAGO TRUNCATULA NODULIN 13 (MTN13) IN REMARK 900 COMPLEX WITH N6-ISOPENTENYLADENINE (2IP) REMARK 900 RELATED ID: 1ICX RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PATHOGENESIS-RELATED PROTEIN LLPR10.1A FROM REMARK 900 YELLOW LUPINE REMARK 900 RELATED ID: 2QIM RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PATHOGENESIS-RELATED PROTEIN LLPR-10.2B FROM REMARK 900 YELLOW LUPINE IN COMPLEX WITH CYTOKININ REMARK 900 RELATED ID: 3US7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PHYTOHORMONE BINDING PROTEIN FROM MEDICAGO REMARK 900 TRUNCATULA IN COMPLEX WITH GIBBERELLIC ACID (GA3) REMARK 900 RELATED ID: 4JHH RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MEDICAGO TRUNCATULA NODULIN 13 (MTN13) IN REMARK 900 COMPLEX WITH KINETIN REMARK 900 RELATED ID: 4JHI RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MEDICAGO TRUNCATULA NODULIN 13 (MTN13) IN REMARK 900 COMPLEX WITH N6-BENZYLADENINE DBREF 4JHG A 1 163 UNP P93330 P93330_MEDTR 1 163 SEQADV 4JHG ILE A -4 UNP P93330 EXPRESSION TAG SEQADV 4JHG ASP A -3 UNP P93330 EXPRESSION TAG SEQADV 4JHG PRO A -2 UNP P93330 EXPRESSION TAG SEQADV 4JHG PHE A -1 UNP P93330 EXPRESSION TAG SEQADV 4JHG THR A 0 UNP P93330 EXPRESSION TAG SEQRES 1 A 168 ILE ASP PRO PHE THR MET GLY VAL ILE THR SER GLU SER SEQRES 2 A 168 GLU TYR VAL SER SER LEU SER ALA GLU LYS LEU TYR ARG SEQRES 3 A 168 GLY ILE VAL GLU ASP GLY ASN ILE ILE TYR PRO LYS ALA SEQRES 4 A 168 LEU PRO ARG PHE ILE GLU LYS ALA GLU THR LEU GLU GLY SEQRES 5 A 168 ASP GLY GLY PRO GLY THR ILE LYS LYS LEU THR PHE VAL SEQRES 6 A 168 GLY ASP PHE GLY SER THR LYS GLN HIS ILE ASP MET VAL SEQRES 7 A 168 ASP ARG GLU ASN CYS ALA TYR THR TYR SER VAL TYR GLU SEQRES 8 A 168 GLY ILE ALA LEU SER ASP GLN PRO LEU GLU LYS ILE VAL SEQRES 9 A 168 PHE GLU PHE LYS LEU VAL PRO THR PRO GLU GLU GLY CYS SEQRES 10 A 168 ILE VAL LYS SER THR THR LYS TYR TYR THR LYS GLY ASP SEQRES 11 A 168 ASP ILE GLU LEU SER LYS ASP TYR LEU GLU ALA GLY ILE SEQRES 12 A 168 GLU ARG PHE GLU GLY PHE THR LYS ALA VAL GLU SER PHE SEQRES 13 A 168 LEU LEU ALA ASN PRO ASP TYR ASN LYS ASP SER ASN HET ZEA A 201 16 HET MLI A 202 7 HET NA A 203 1 HET NA A 204 1 HET NA A 205 1 HETNAM ZEA (2E)-2-METHYL-4-(9H-PURIN-6-YLAMINO)BUT-2-EN-1-OL HETNAM MLI MALONATE ION HETNAM NA SODIUM ION HETSYN ZEA TRANS-ZEATIN FORMUL 2 ZEA C10 H13 N5 O FORMUL 3 MLI C3 H2 O4 2- FORMUL 4 NA 3(NA 1+) FORMUL 7 HOH *121(H2 O) HELIX 1 1 SER A 15 GLU A 25 1 11 HELIX 2 2 ASP A 26 LEU A 35 1 10 HELIX 3 3 SER A 130 ASN A 155 1 26 SHEET 1 A 7 VAL A 3 SER A 12 0 SHEET 2 A 7 CYS A 112 THR A 122 -1 O VAL A 114 N TYR A 10 SHEET 3 A 7 LEU A 95 PRO A 106 -1 N VAL A 99 O LYS A 119 SHEET 4 A 7 ALA A 79 VAL A 84 -1 N TYR A 82 O PHE A 100 SHEET 5 A 7 SER A 65 ASP A 74 -1 N ASP A 71 O THR A 81 SHEET 6 A 7 ILE A 54 PHE A 59 -1 N LEU A 57 O THR A 66 SHEET 7 A 7 ILE A 39 GLU A 46 -1 N LEU A 45 O ILE A 54 LINK O THR A 0 NA NA A 205 1555 1555 2.32 LINK O PHE A 59 NA NA A 203 1555 1555 2.38 LINK O GLY A 61 NA NA A 203 1555 1555 2.44 LINK O SER A 65 NA NA A 204 1555 1555 2.22 LINK OG1BTHR A 66 NA NA A 204 1555 1555 2.67 LINK O GLY A 124 NA NA A 205 1555 1555 2.66 LINK NA NA A 203 O HOH A 345 1555 1555 2.39 LINK NA NA A 203 O HOH A 346 1555 1555 2.93 LINK NA NA A 203 O HOH A 347 1555 1555 2.17 LINK NA NA A 203 O HOH A 348 1555 1555 2.42 LINK NA NA A 204 O HOH A 328 1555 1555 2.37 LINK NA NA A 204 O HOH A 395 1555 1555 2.36 LINK NA NA A 205 O HOH A 302 1555 1555 2.27 LINK NA NA A 205 O HOH A 416 1555 1555 2.60 SITE 1 AC1 11 GLY A 61 ASP A 62 THR A 66 GLN A 68 SITE 2 AC1 11 TYR A 82 ILE A 98 PHE A 100 TYR A 133 SITE 3 AC1 11 GLY A 137 ARG A 140 PHE A 141 SITE 1 AC2 5 GLY A 87 ILE A 88 ALA A 89 HOH A 385 SITE 2 AC2 5 HOH A 389 SITE 1 AC3 6 PHE A 59 GLY A 61 HOH A 345 HOH A 346 SITE 2 AC3 6 HOH A 347 HOH A 348 SITE 1 AC4 5 ASP A 62 SER A 65 THR A 66 HOH A 328 SITE 2 AC4 5 HOH A 395 SITE 1 AC5 4 THR A 0 GLY A 124 HOH A 302 HOH A 416 CRYST1 96.110 96.110 113.244 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010405 0.006007 0.000000 0.00000 SCALE2 0.000000 0.012014 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008830 0.00000