HEADER PROTEIN BINDING 08-MAR-13 4JJY TITLE ALIX V DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROGRAMMED CELL DEATH 6-INTERACTING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PDCD6-INTERACTING PROTEIN, ALG-2-INTERACTING PROTEIN 1, COMPND 5 HP95; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PDCD6IP, AIP1, ALIX, KIAA1375; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS UBIQUITIN, ENDOSOME, MEMBRANE TRAFFICKING, VIRUS BUDDING, ESCRTI, KEYWDS 2 PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR N.PASHKOVA,L.GAKHAR,L.YU,R.C.PIPER REVDAT 3 20-NOV-24 4JJY 1 SEQADV LINK REVDAT 2 10-JUL-13 4JJY 1 JRNL REVDAT 1 19-JUN-13 4JJY 0 JRNL AUTH N.PASHKOVA,L.GAKHAR,S.C.WINISTORFER,A.B.SUNSHINE,M.RICH, JRNL AUTH 2 M.J.DUNHAM,L.YU,R.C.PIPER JRNL TITL THE YEAST ALIX HOMOLOG BRO1 FUNCTIONS AS A UBIQUITIN JRNL TITL 2 RECEPTOR FOR PROTEIN SORTING INTO MULTIVESICULAR ENDOSOMES. JRNL REF DEV.CELL V. 25 520 2013 JRNL REFN ISSN 1534-5807 JRNL PMID 23726974 JRNL DOI 10.1016/J.DEVCEL.2013.04.007 REMARK 2 REMARK 2 RESOLUTION. 6.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 6.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 3760 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.283 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.030 REMARK 3 FREE R VALUE TEST SET COUNT : 377 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.5580 - 9.3516 0.99 1149 128 0.1757 0.2515 REMARK 3 2 9.3516 - 7.4388 1.00 1122 124 0.2392 0.3235 REMARK 3 3 7.4388 - 6.5032 1.00 1112 125 0.2860 0.3829 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 1.090 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 468.9 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5452 REMARK 3 ANGLE : 0.550 7358 REMARK 3 CHIRALITY : 0.031 864 REMARK 3 PLANARITY : 0.003 972 REMARK 3 DIHEDRAL : 8.998 2118 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4JJY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000078140. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK MONOCHROMATOR REMARK 200 DOUBLE CRYSTAL FOCUSSING REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NOIR-1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 3774 REMARK 200 RESOLUTION RANGE HIGH (A) : 6.500 REMARK 200 RESOLUTION RANGE LOW (A) : 39.560 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 21.41 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 6.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 6.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 22.27 REMARK 200 R MERGE FOR SHELL (I) : 0.74800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 78.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CITRATE PH 5, 6-8% PEG REMARK 280 8000, 5-10% ETHYLENE GLYCOL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 111.88500 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 111.88500 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 111.88500 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 111.88500 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 111.88500 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 111.88500 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 111.88500 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 111.88500 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 111.88500 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 111.88500 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 111.88500 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 111.88500 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 111.88500 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 111.88500 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 111.88500 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 111.88500 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 111.88500 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 111.88500 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 111.88500 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 111.88500 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 111.88500 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 111.88500 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 111.88500 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 111.88500 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 111.88500 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 111.88500 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 111.88500 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 111.88500 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 111.88500 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 111.88500 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 111.88500 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 111.88500 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 111.88500 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 111.88500 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 111.88500 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 111.88500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 350 REMARK 465 ASP A 351 REMARK 465 PRO A 352 REMARK 465 PHE A 353 REMARK 465 THR A 354 REMARK 465 PHE A 355 REMARK 465 GLU A 356 REMARK 465 LYS A 357 REMARK 465 MSE A 358 REMARK 465 VAL A 359 REMARK 465 PRO A 360 REMARK 465 ARG A 703 REMARK 465 ASP A 704 REMARK 465 GLU A 705 REMARK 465 LEU A 706 REMARK 465 LEU A 707 REMARK 465 LYS A 708 REMARK 465 ASP A 709 REMARK 465 ILE B 350 REMARK 465 ASP B 351 REMARK 465 PRO B 352 REMARK 465 PHE B 353 REMARK 465 THR B 354 REMARK 465 PHE B 355 REMARK 465 GLU B 356 REMARK 465 LYS B 357 REMARK 465 MSE B 358 REMARK 465 VAL B 359 REMARK 465 PRO B 360 REMARK 465 ARG B 703 REMARK 465 ASP B 704 REMARK 465 GLU B 705 REMARK 465 LEU B 706 REMARK 465 LEU B 707 REMARK 465 LYS B 708 REMARK 465 ASP B 709 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 365 21.99 -152.41 REMARK 500 SER A 366 41.84 -161.12 REMARK 500 LEU A 367 -60.81 -97.66 REMARK 500 LEU A 377 -58.27 -167.71 REMARK 500 GLN A 384 38.12 -89.27 REMARK 500 MSE A 385 -53.86 -142.90 REMARK 500 ALA A 404 16.40 -147.40 REMARK 500 ILE A 405 36.24 -140.19 REMARK 500 GLU A 406 -54.37 -130.48 REMARK 500 SER A 409 -64.61 -158.82 REMARK 500 GLN A 427 54.25 -94.41 REMARK 500 ARG A 475 52.24 -148.22 REMARK 500 ASN A 482 -54.11 -158.65 REMARK 500 CYS A 524 -154.45 -79.82 REMARK 500 LYS A 525 157.26 65.76 REMARK 500 PRO A 535 104.67 -57.35 REMARK 500 LEU A 552 -55.50 -166.01 REMARK 500 LEU A 569 36.53 -90.09 REMARK 500 GLU A 570 -54.91 -135.08 REMARK 500 SER A 575 51.73 -96.33 REMARK 500 MSE A 580 58.99 -145.01 REMARK 500 SER A 642 -110.95 66.42 REMARK 500 ASN A 643 -92.36 -97.79 REMARK 500 ALA A 646 -44.98 -155.16 REMARK 500 THR A 674 -74.21 52.61 REMARK 500 GLN B 365 20.05 -153.37 REMARK 500 SER B 366 39.97 -162.68 REMARK 500 LEU B 367 -60.35 -98.62 REMARK 500 LEU B 377 -60.40 -164.87 REMARK 500 GLN B 384 44.53 -90.01 REMARK 500 MSE B 385 -56.93 -147.20 REMARK 500 ALA B 404 16.57 -147.97 REMARK 500 GLU B 406 -52.84 -130.77 REMARK 500 SER B 409 -64.77 -158.24 REMARK 500 GLN B 427 54.47 -94.41 REMARK 500 ARG B 475 52.32 -148.15 REMARK 500 ASN B 482 -52.61 -159.66 REMARK 500 PRO B 535 105.47 -56.36 REMARK 500 ALA B 540 112.53 -160.22 REMARK 500 GLN B 544 90.98 -66.85 REMARK 500 LEU B 552 -56.66 -167.22 REMARK 500 LEU B 569 34.69 -89.73 REMARK 500 GLU B 570 -53.64 -136.34 REMARK 500 SER B 575 51.48 -96.65 REMARK 500 ASP B 579 89.48 -69.12 REMARK 500 LYS B 640 -55.57 56.23 REMARK 500 GLN B 641 -56.88 -149.62 REMARK 500 SER B 642 -52.69 162.02 REMARK 500 THR B 674 -73.29 52.19 REMARK 500 REMARK 500 REMARK: NULL DBREF 4JJY A 355 709 UNP Q8WUM4 PDC6I_HUMAN 355 708 DBREF 4JJY B 355 709 UNP Q8WUM4 PDC6I_HUMAN 355 708 SEQADV 4JJY ILE A 350 UNP Q8WUM4 EXPRESSION TAG SEQADV 4JJY ASP A 351 UNP Q8WUM4 EXPRESSION TAG SEQADV 4JJY PRO A 352 UNP Q8WUM4 EXPRESSION TAG SEQADV 4JJY PHE A 353 UNP Q8WUM4 EXPRESSION TAG SEQADV 4JJY THR A 354 UNP Q8WUM4 EXPRESSION TAG SEQADV 4JJY ARG A 702 UNP Q8WUM4 EXPRESSION TAG SEQADV 4JJY ILE B 350 UNP Q8WUM4 EXPRESSION TAG SEQADV 4JJY ASP B 351 UNP Q8WUM4 EXPRESSION TAG SEQADV 4JJY PRO B 352 UNP Q8WUM4 EXPRESSION TAG SEQADV 4JJY PHE B 353 UNP Q8WUM4 EXPRESSION TAG SEQADV 4JJY THR B 354 UNP Q8WUM4 EXPRESSION TAG SEQADV 4JJY ARG B 702 UNP Q8WUM4 EXPRESSION TAG SEQRES 1 A 360 ILE ASP PRO PHE THR PHE GLU LYS MSE VAL PRO VAL SER SEQRES 2 A 360 VAL GLN GLN SER LEU ALA ALA TYR ASN GLN ARG LYS ALA SEQRES 3 A 360 ASP LEU VAL ASN ARG SER ILE ALA GLN MSE ARG GLU ALA SEQRES 4 A 360 THR THR LEU ALA ASN GLY VAL LEU ALA SER LEU ASN LEU SEQRES 5 A 360 PRO ALA ALA ILE GLU ASP VAL SER GLY ASP THR VAL PRO SEQRES 6 A 360 GLN SER ILE LEU THR LYS SER ARG SER VAL ILE GLU GLN SEQRES 7 A 360 GLY GLY ILE GLN THR VAL ASP GLN LEU ILE LYS GLU LEU SEQRES 8 A 360 PRO GLU LEU LEU GLN ARG ASN ARG GLU ILE LEU ASP GLU SEQRES 9 A 360 SER LEU ARG LEU LEU ASP GLU GLU GLU ALA THR ASP ASN SEQRES 10 A 360 ASP LEU ARG ALA LYS PHE LYS GLU ARG TRP GLN ARG THR SEQRES 11 A 360 PRO SER ASN GLU LEU TYR LYS PRO LEU ARG ALA GLU GLY SEQRES 12 A 360 THR ASN PHE ARG THR VAL LEU ASP LYS ALA VAL GLN ALA SEQRES 13 A 360 ASP GLY GLN VAL LYS GLU CYS TYR GLN SER HIS ARG ASP SEQRES 14 A 360 THR ILE VAL LEU LEU CYS LYS PRO GLU PRO GLU LEU ASN SEQRES 15 A 360 ALA ALA ILE PRO SER ALA ASN PRO ALA LYS THR MSE GLN SEQRES 16 A 360 GLY SER GLU VAL VAL ASN VAL LEU LYS SER LEU LEU SER SEQRES 17 A 360 ASN LEU ASP GLU VAL LYS LYS GLU ARG GLU GLY LEU GLU SEQRES 18 A 360 ASN ASP LEU LYS SER VAL ASN PHE ASP MSE THR SER LYS SEQRES 19 A 360 PHE LEU THR ALA LEU ALA GLN ASP GLY VAL ILE ASN GLU SEQRES 20 A 360 GLU ALA LEU SER VAL THR GLU LEU ASP ARG VAL TYR GLY SEQRES 21 A 360 GLY LEU THR THR LYS VAL GLN GLU SER LEU LYS LYS GLN SEQRES 22 A 360 GLU GLY LEU LEU LYS ASN ILE GLN VAL SER HIS GLN GLU SEQRES 23 A 360 PHE SER LYS MSE LYS GLN SER ASN ASN GLU ALA ASN LEU SEQRES 24 A 360 ARG GLU GLU VAL LEU LYS ASN LEU ALA THR ALA TYR ASP SEQRES 25 A 360 ASN PHE VAL GLU LEU VAL ALA ASN LEU LYS GLU GLY THR SEQRES 26 A 360 LYS PHE TYR ASN GLU LEU THR GLU ILE LEU VAL ARG PHE SEQRES 27 A 360 GLN ASN LYS CYS SER ASP ILE VAL PHE ALA ARG LYS THR SEQRES 28 A 360 GLU ARG ARG ASP GLU LEU LEU LYS ASP SEQRES 1 B 360 ILE ASP PRO PHE THR PHE GLU LYS MSE VAL PRO VAL SER SEQRES 2 B 360 VAL GLN GLN SER LEU ALA ALA TYR ASN GLN ARG LYS ALA SEQRES 3 B 360 ASP LEU VAL ASN ARG SER ILE ALA GLN MSE ARG GLU ALA SEQRES 4 B 360 THR THR LEU ALA ASN GLY VAL LEU ALA SER LEU ASN LEU SEQRES 5 B 360 PRO ALA ALA ILE GLU ASP VAL SER GLY ASP THR VAL PRO SEQRES 6 B 360 GLN SER ILE LEU THR LYS SER ARG SER VAL ILE GLU GLN SEQRES 7 B 360 GLY GLY ILE GLN THR VAL ASP GLN LEU ILE LYS GLU LEU SEQRES 8 B 360 PRO GLU LEU LEU GLN ARG ASN ARG GLU ILE LEU ASP GLU SEQRES 9 B 360 SER LEU ARG LEU LEU ASP GLU GLU GLU ALA THR ASP ASN SEQRES 10 B 360 ASP LEU ARG ALA LYS PHE LYS GLU ARG TRP GLN ARG THR SEQRES 11 B 360 PRO SER ASN GLU LEU TYR LYS PRO LEU ARG ALA GLU GLY SEQRES 12 B 360 THR ASN PHE ARG THR VAL LEU ASP LYS ALA VAL GLN ALA SEQRES 13 B 360 ASP GLY GLN VAL LYS GLU CYS TYR GLN SER HIS ARG ASP SEQRES 14 B 360 THR ILE VAL LEU LEU CYS LYS PRO GLU PRO GLU LEU ASN SEQRES 15 B 360 ALA ALA ILE PRO SER ALA ASN PRO ALA LYS THR MSE GLN SEQRES 16 B 360 GLY SER GLU VAL VAL ASN VAL LEU LYS SER LEU LEU SER SEQRES 17 B 360 ASN LEU ASP GLU VAL LYS LYS GLU ARG GLU GLY LEU GLU SEQRES 18 B 360 ASN ASP LEU LYS SER VAL ASN PHE ASP MSE THR SER LYS SEQRES 19 B 360 PHE LEU THR ALA LEU ALA GLN ASP GLY VAL ILE ASN GLU SEQRES 20 B 360 GLU ALA LEU SER VAL THR GLU LEU ASP ARG VAL TYR GLY SEQRES 21 B 360 GLY LEU THR THR LYS VAL GLN GLU SER LEU LYS LYS GLN SEQRES 22 B 360 GLU GLY LEU LEU LYS ASN ILE GLN VAL SER HIS GLN GLU SEQRES 23 B 360 PHE SER LYS MSE LYS GLN SER ASN ASN GLU ALA ASN LEU SEQRES 24 B 360 ARG GLU GLU VAL LEU LYS ASN LEU ALA THR ALA TYR ASP SEQRES 25 B 360 ASN PHE VAL GLU LEU VAL ALA ASN LEU LYS GLU GLY THR SEQRES 26 B 360 LYS PHE TYR ASN GLU LEU THR GLU ILE LEU VAL ARG PHE SEQRES 27 B 360 GLN ASN LYS CYS SER ASP ILE VAL PHE ALA ARG LYS THR SEQRES 28 B 360 GLU ARG ARG ASP GLU LEU LEU LYS ASP MODRES 4JJY MSE A 385 MET SELENOMETHIONINE MODRES 4JJY MSE A 543 MET SELENOMETHIONINE MODRES 4JJY MSE A 580 MET SELENOMETHIONINE MODRES 4JJY MSE A 639 MET SELENOMETHIONINE MODRES 4JJY MSE B 385 MET SELENOMETHIONINE MODRES 4JJY MSE B 543 MET SELENOMETHIONINE MODRES 4JJY MSE B 580 MET SELENOMETHIONINE MODRES 4JJY MSE B 639 MET SELENOMETHIONINE HET MSE A 385 8 HET MSE A 543 8 HET MSE A 580 8 HET MSE A 639 8 HET MSE B 385 8 HET MSE B 543 8 HET MSE B 580 8 HET MSE B 639 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 8(C5 H11 N O2 SE) HELIX 1 1 LEU A 367 LEU A 399 1 33 HELIX 2 2 PRO A 414 GLN A 427 1 14 HELIX 3 3 GLY A 429 GLU A 439 1 11 HELIX 4 4 GLU A 439 PHE A 472 1 34 HELIX 5 5 TYR A 485 HIS A 516 1 32 HELIX 6 6 HIS A 516 CYS A 524 1 9 HELIX 7 7 PRO A 526 ILE A 534 1 9 HELIX 8 8 VAL A 549 SER A 575 1 27 HELIX 9 9 MSE A 580 ASP A 591 1 12 HELIX 10 10 ASN A 595 TYR A 608 1 14 HELIX 11 11 TYR A 608 SER A 637 1 30 HELIX 12 12 ALA A 646 GLY A 673 1 28 HELIX 13 13 THR A 674 ARG A 702 1 29 HELIX 14 14 LEU B 367 LEU B 399 1 33 HELIX 15 15 PRO B 414 GLN B 427 1 14 HELIX 16 16 GLY B 429 GLU B 439 1 11 HELIX 17 17 GLU B 439 PHE B 472 1 34 HELIX 18 18 TYR B 485 HIS B 516 1 32 HELIX 19 19 HIS B 516 CYS B 524 1 9 HELIX 20 20 PRO B 526 ILE B 534 1 9 HELIX 21 21 SER B 546 SER B 575 1 30 HELIX 22 22 THR B 581 ASP B 591 1 11 HELIX 23 23 ASN B 595 TYR B 608 1 14 HELIX 24 24 TYR B 608 SER B 637 1 30 HELIX 25 25 GLU B 645 GLY B 673 1 29 HELIX 26 26 THR B 674 ARG B 702 1 29 LINK C GLN A 384 N MSE A 385 1555 1555 1.33 LINK C MSE A 385 N ARG A 386 1555 1555 1.33 LINK C THR A 542 N MSE A 543 1555 1555 1.33 LINK C MSE A 543 N GLN A 544 1555 1555 1.33 LINK C ASP A 579 N MSE A 580 1555 1555 1.33 LINK C MSE A 580 N THR A 581 1555 1555 1.33 LINK C LYS A 638 N MSE A 639 1555 1555 1.33 LINK C MSE A 639 N LYS A 640 1555 1555 1.33 LINK C GLN B 384 N MSE B 385 1555 1555 1.33 LINK C MSE B 385 N ARG B 386 1555 1555 1.33 LINK C THR B 542 N MSE B 543 1555 1555 1.33 LINK C MSE B 543 N GLN B 544 1555 1555 1.33 LINK C ASP B 579 N MSE B 580 1555 1555 1.33 LINK C MSE B 580 N THR B 581 1555 1555 1.33 LINK C LYS B 638 N MSE B 639 1555 1555 1.33 LINK C MSE B 639 N LYS B 640 1555 1555 1.33 CISPEP 1 LEU A 401 PRO A 402 0 -0.76 CISPEP 2 LEU B 401 PRO B 402 0 -1.52 CRYST1 223.770 223.770 223.770 90.00 90.00 90.00 I 2 3 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004469 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004469 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004469 0.00000 HETATM 187 N MSE A 385 95.929 69.782 8.214 1.00 48.94 N HETATM 188 CA MSE A 385 95.415 70.811 9.108 1.00 48.94 C HETATM 189 C MSE A 385 95.922 70.571 10.525 1.00 48.94 C HETATM 190 O MSE A 385 96.511 71.455 11.147 1.00 48.94 O HETATM 191 CB MSE A 385 93.884 70.804 9.094 1.00 48.94 C HETATM 192 CG MSE A 385 93.239 71.821 10.019 1.00 48.94 C HETATM 193 SE MSE A 385 92.720 73.475 9.126 1.00 48.94 SE HETATM 194 CE MSE A 385 92.224 74.493 10.705 1.00 48.94 C HETATM 1423 N MSE A 543 116.258 95.541 27.173 1.00329.43 N HETATM 1424 CA MSE A 543 114.903 95.013 27.101 1.00329.43 C HETATM 1425 C MSE A 543 113.921 96.099 27.513 1.00329.43 C HETATM 1426 O MSE A 543 112.858 96.258 26.916 1.00329.43 O HETATM 1427 CB MSE A 543 114.744 93.791 28.007 1.00329.43 C HETATM 1428 CG MSE A 543 115.424 92.528 27.498 1.00329.43 C HETATM 1429 SE MSE A 543 114.641 91.840 25.848 1.00329.43 SE HETATM 1430 CE MSE A 543 115.841 92.669 24.552 1.00329.43 C HETATM 1714 N MSE A 580 72.769 67.210 -3.759 1.00 94.90 N HETATM 1715 CA MSE A 580 72.696 67.667 -5.143 1.00 94.90 C HETATM 1716 C MSE A 580 72.464 66.507 -6.107 1.00 94.90 C HETATM 1717 O MSE A 580 73.261 66.264 -7.013 1.00 94.90 O HETATM 1718 CB MSE A 580 73.954 68.456 -5.523 1.00 94.90 C HETATM 1719 CG MSE A 580 75.260 67.849 -5.029 1.00 94.90 C HETATM 1720 SE MSE A 580 76.306 67.007 -6.444 1.00 94.90 SE HETATM 1721 CE MSE A 580 76.378 68.501 -7.695 1.00 94.90 C HETATM 2173 N MSE A 639 121.406 90.078 21.811 1.00117.33 N HETATM 2174 CA MSE A 639 122.077 90.809 22.878 1.00117.33 C HETATM 2175 C MSE A 639 122.350 89.941 24.105 1.00117.33 C HETATM 2176 O MSE A 639 121.806 90.179 25.183 1.00117.33 O HETATM 2177 CB MSE A 639 121.273 92.058 23.266 1.00117.33 C HETATM 2178 CG MSE A 639 119.769 91.837 23.424 1.00117.33 C HETATM 2179 SE MSE A 639 118.712 92.386 21.871 1.00117.33 SE HETATM 2180 CE MSE A 639 119.334 94.226 21.680 1.00117.33 C TER 2699 ARG A 702 HETATM 2886 N MSE B 385 135.331 13.655 75.224 1.00 34.90 N HETATM 2887 CA MSE B 385 136.632 14.297 75.341 1.00 34.90 C HETATM 2888 C MSE B 385 136.638 15.608 74.566 1.00 34.90 C HETATM 2889 O MSE B 385 136.906 16.673 75.123 1.00 34.90 O HETATM 2890 CB MSE B 385 137.723 13.370 74.801 1.00 34.90 C HETATM 2891 CG MSE B 385 139.108 13.987 74.756 1.00 34.90 C HETATM 2892 SE MSE B 385 140.035 13.938 76.469 1.00 34.90 SE HETATM 2893 CE MSE B 385 141.533 15.087 76.003 1.00 34.90 C HETATM 4122 N MSE B 543 141.212 47.964 90.289 1.00354.05 N HETATM 4123 CA MSE B 543 141.746 46.837 89.527 1.00354.05 C HETATM 4124 C MSE B 543 143.233 46.975 89.212 1.00354.05 C HETATM 4125 O MSE B 543 143.974 45.993 89.268 1.00354.05 O HETATM 4126 CB MSE B 543 140.955 46.628 88.233 1.00354.05 C HETATM 4127 CG MSE B 543 139.455 46.474 88.435 1.00354.05 C HETATM 4128 SE MSE B 543 138.968 44.923 89.501 1.00354.05 SE HETATM 4129 CE MSE B 543 139.417 43.539 88.209 1.00354.05 C HETATM 4413 N MSE B 580 147.168 -8.589 72.863 1.00121.38 N HETATM 4414 CA MSE B 580 146.769 -9.432 73.980 1.00121.38 C HETATM 4415 C MSE B 580 145.973 -10.625 73.461 1.00121.38 C HETATM 4416 O MSE B 580 144.744 -10.589 73.406 1.00121.38 O HETATM 4417 CB MSE B 580 145.946 -8.617 74.980 1.00121.38 C HETATM 4418 CG MSE B 580 145.747 -9.281 76.329 1.00121.38 C HETATM 4419 SE MSE B 580 144.023 -10.170 76.475 1.00121.38 SE HETATM 4420 CE MSE B 580 142.870 -8.638 76.129 1.00121.38 C HETATM 4872 N MSE B 639 130.658 45.424 93.295 1.00400.49 N HETATM 4873 CA MSE B 639 130.372 46.778 93.776 1.00400.49 C HETATM 4874 C MSE B 639 129.883 47.669 92.636 1.00400.49 C HETATM 4875 O MSE B 639 130.332 48.808 92.490 1.00400.49 O HETATM 4876 CB MSE B 639 131.618 47.374 94.443 1.00400.49 C HETATM 4877 CG MSE B 639 131.365 48.543 95.396 1.00400.49 C HETATM 4878 SE MSE B 639 130.129 48.132 96.848 1.00400.49 SE HETATM 4879 CE MSE B 639 130.729 49.455 98.153 1.00400.49 C TER 5398 ARG B 702 CONECT 180 187 CONECT 187 180 188 CONECT 188 187 189 191 CONECT 189 188 190 195 CONECT 190 189 CONECT 191 188 192 CONECT 192 191 193 CONECT 193 192 194 CONECT 194 193 CONECT 195 189 CONECT 1418 1423 CONECT 1423 1418 1424 CONECT 1424 1423 1425 1427 CONECT 1425 1424 1426 1431 CONECT 1426 1425 CONECT 1427 1424 1428 CONECT 1428 1427 1429 CONECT 1429 1428 1430 CONECT 1430 1429 CONECT 1431 1425 CONECT 1708 1714 CONECT 1714 1708 1715 CONECT 1715 1714 1716 1718 CONECT 1716 1715 1717 1722 CONECT 1717 1716 CONECT 1718 1715 1719 CONECT 1719 1718 1720 CONECT 1720 1719 1721 CONECT 1721 1720 CONECT 1722 1716 CONECT 2166 2173 CONECT 2173 2166 2174 CONECT 2174 2173 2175 2177 CONECT 2175 2174 2176 2181 CONECT 2176 2175 CONECT 2177 2174 2178 CONECT 2178 2177 2179 CONECT 2179 2178 2180 CONECT 2180 2179 CONECT 2181 2175 CONECT 2879 2886 CONECT 2886 2879 2887 CONECT 2887 2886 2888 2890 CONECT 2888 2887 2889 2894 CONECT 2889 2888 CONECT 2890 2887 2891 CONECT 2891 2890 2892 CONECT 2892 2891 2893 CONECT 2893 2892 CONECT 2894 2888 CONECT 4117 4122 CONECT 4122 4117 4123 CONECT 4123 4122 4124 4126 CONECT 4124 4123 4125 4130 CONECT 4125 4124 CONECT 4126 4123 4127 CONECT 4127 4126 4128 CONECT 4128 4127 4129 CONECT 4129 4128 CONECT 4130 4124 CONECT 4407 4413 CONECT 4413 4407 4414 CONECT 4414 4413 4415 4417 CONECT 4415 4414 4416 4421 CONECT 4416 4415 CONECT 4417 4414 4418 CONECT 4418 4417 4419 CONECT 4419 4418 4420 CONECT 4420 4419 CONECT 4421 4415 CONECT 4865 4872 CONECT 4872 4865 4873 CONECT 4873 4872 4874 4876 CONECT 4874 4873 4875 4880 CONECT 4875 4874 CONECT 4876 4873 4877 CONECT 4877 4876 4878 CONECT 4878 4877 4879 CONECT 4879 4878 CONECT 4880 4874 MASTER 391 0 8 26 0 0 0 6 5396 2 80 56 END