data_4JK0 # _entry.id 4JK0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4JK0 pdb_00004jk0 10.2210/pdb4jk0/pdb NDB NA2291 ? ? RCSB RCSB078142 ? ? WWPDB D_1000078142 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4JGN 'Crystal structure of p19 in complex with double-helical RNA 19mer pUUG(CUG)5CU' unspecified PDB 4J39 'Crystal structure of p19 in complex with double-helical RNA 19mer p(CAG)3C(CUG)3' unspecified PDB 1R9F 'Crystal structure of p19 complexed with 19-bp small interfering RNA' unspecified PDB 4E48 'Structure of 20mer double-helical RNA composed of CUG/CUG-repeats' unspecified # _pdbx_database_status.entry_id 4JK0 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-03-08 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Katorcha, E.' 1 'Tamjar, J.' 2 'Popov, A.N.' 3 'Malinina, L.' 4 # _citation.id primary _citation.title 'Procrustean bed of RNA silencing suppression' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Katorcha, E.' 1 ? primary 'Tamjar, J.' 2 ? primary 'Popov, A.N.' 3 ? primary 'Malinina, L.' 4 ? # _cell.length_a 90.391 _cell.length_b 90.391 _cell.length_c 148.909 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 4JK0 _cell.pdbx_unique_axis ? _cell.Z_PDB 18 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'H 3 2' _symmetry.entry_id 4JK0 _symmetry.Int_Tables_number 155 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RNA silencing suppressor p19' 14540.231 1 ? T111Q 'UNP residues 27-149' ? 2 polymer syn "5'-R(P*UP*UP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*U)-3'" 6612.860 1 ? ? ? 'siRNA pUUUG(CUG)5CU' 3 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 4 water nat water 18.015 187 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '19 kDa symptom severity modulator' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSHMTSPFKLPDESPSWTEWRLHNDETNSNQDNPLGFKESWGFGKVVFKRYLRYDRTEASLHRVLGSWTGDSVNYAASRF FGFDQIGCQYSIRFRGVSITVSGGSRTLQHLCEMAIRSKQELLQLAP ; ;GSHMTSPFKLPDESPSWTEWRLHNDETNSNQDNPLGFKESWGFGKVVFKRYLRYDRTEASLHRVLGSWTGDSVNYAASRF FGFDQIGCQYSIRFRGVSITVSGGSRTLQHLCEMAIRSKQELLQLAP ; D ? 2 polyribonucleotide no no UUUGCUGCUGCUGCUGCUGCU UUUGCUGCUGCUGCUGCUGCU B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 THR n 1 6 SER n 1 7 PRO n 1 8 PHE n 1 9 LYS n 1 10 LEU n 1 11 PRO n 1 12 ASP n 1 13 GLU n 1 14 SER n 1 15 PRO n 1 16 SER n 1 17 TRP n 1 18 THR n 1 19 GLU n 1 20 TRP n 1 21 ARG n 1 22 LEU n 1 23 HIS n 1 24 ASN n 1 25 ASP n 1 26 GLU n 1 27 THR n 1 28 ASN n 1 29 SER n 1 30 ASN n 1 31 GLN n 1 32 ASP n 1 33 ASN n 1 34 PRO n 1 35 LEU n 1 36 GLY n 1 37 PHE n 1 38 LYS n 1 39 GLU n 1 40 SER n 1 41 TRP n 1 42 GLY n 1 43 PHE n 1 44 GLY n 1 45 LYS n 1 46 VAL n 1 47 VAL n 1 48 PHE n 1 49 LYS n 1 50 ARG n 1 51 TYR n 1 52 LEU n 1 53 ARG n 1 54 TYR n 1 55 ASP n 1 56 ARG n 1 57 THR n 1 58 GLU n 1 59 ALA n 1 60 SER n 1 61 LEU n 1 62 HIS n 1 63 ARG n 1 64 VAL n 1 65 LEU n 1 66 GLY n 1 67 SER n 1 68 TRP n 1 69 THR n 1 70 GLY n 1 71 ASP n 1 72 SER n 1 73 VAL n 1 74 ASN n 1 75 TYR n 1 76 ALA n 1 77 ALA n 1 78 SER n 1 79 ARG n 1 80 PHE n 1 81 PHE n 1 82 GLY n 1 83 PHE n 1 84 ASP n 1 85 GLN n 1 86 ILE n 1 87 GLY n 1 88 CYS n 1 89 GLN n 1 90 TYR n 1 91 SER n 1 92 ILE n 1 93 ARG n 1 94 PHE n 1 95 ARG n 1 96 GLY n 1 97 VAL n 1 98 SER n 1 99 ILE n 1 100 THR n 1 101 VAL n 1 102 SER n 1 103 GLY n 1 104 GLY n 1 105 SER n 1 106 ARG n 1 107 THR n 1 108 LEU n 1 109 GLN n 1 110 HIS n 1 111 LEU n 1 112 CYS n 1 113 GLU n 1 114 MET n 1 115 ALA n 1 116 ILE n 1 117 ARG n 1 118 SER n 1 119 LYS n 1 120 GLN n 1 121 GLU n 1 122 LEU n 1 123 LEU n 1 124 GLN n 1 125 LEU n 1 126 ALA n 1 127 PRO n 2 1 U n 2 2 U n 2 3 U n 2 4 G n 2 5 C n 2 6 U n 2 7 G n 2 8 C n 2 9 U n 2 10 G n 2 11 C n 2 12 U n 2 13 G n 2 14 C n 2 15 U n 2 16 G n 2 17 C n 2 18 U n 2 19 G n 2 20 C n 2 21 U n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name TBSV _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ORF4 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Tomato bushy stunt virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 12145 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP P19_TBSVK P69517 1 ;TSPFKLPDESPSWTEWRLHNDETNSNQDNPLGFKESWGFGKVVFKRYLRYDRTEASLHRVLGSWTGDSVNYAASRFFGFD QIGCTYSIRFRGVSITVSGGSRTLQHLCEMAIRSKQELLQLAP ; 27 ? 2 PDB 4JK0 4JK0 2 UUUGCUGCUGCUGCUGCUGCU 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4JK0 D 5 ? 127 ? P69517 27 ? 149 ? 5 127 2 2 4JK0 B 1 ? 21 ? 4JK0 501 ? 521 ? 501 521 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4JK0 GLY D 1 ? UNP P69517 ? ? 'expression tag' 1 1 1 4JK0 SER D 2 ? UNP P69517 ? ? 'expression tag' 2 2 1 4JK0 HIS D 3 ? UNP P69517 ? ? 'expression tag' 3 3 1 4JK0 MET D 4 ? UNP P69517 ? ? 'expression tag' 4 4 1 4JK0 GLN D 89 ? UNP P69517 THR 111 'engineered mutation' 89 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4JK0 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.77 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 55.55 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 5 _exptl_crystal_grow.temp 291 _exptl_crystal_grow.pdbx_details '1.6 M ammonium sulfate, 0.1 M citric acid, pH 5, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9724 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-1' _diffrn_source.pdbx_wavelength_list 0.9724 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-1 # _reflns.entry_id 4JK0 _reflns.d_resolution_high 2.300 _reflns.d_resolution_low 30.0 _reflns.number_obs 10511 _reflns.pdbx_Rmerge_I_obs 0.118 _reflns.pdbx_netI_over_sigmaI 9.1 _reflns.pdbx_chi_squared 1.124 _reflns.pdbx_redundancy 2.7 _reflns.percent_possible_obs 98.6 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.300 2.380 ? ? ? 0.630 ? ? 1.231 2.7 ? 1021 98.5 1 1 2.380 2.480 ? ? ? 0.491 ? ? 1.176 2.7 ? 1038 98.8 2 1 2.480 2.590 ? ? ? 0.380 ? ? 1.126 2.7 ? 1040 99.0 3 1 2.590 2.730 ? ? ? 0.320 ? ? 1.147 2.7 ? 1043 99.0 4 1 2.730 2.900 ? ? ? 0.233 ? ? 1.112 2.7 ? 1055 99.3 5 1 2.900 3.120 ? ? ? 0.158 ? ? 1.118 2.7 ? 1057 99.2 6 1 3.120 3.430 ? ? ? 0.098 ? ? 1.061 2.7 ? 1046 99.4 7 1 3.430 3.930 ? ? ? 0.079 ? ? 0.977 2.7 ? 1058 99.2 8 1 3.930 4.950 ? ? ? 0.086 ? ? 1.183 2.7 ? 1077 99.3 9 1 4.950 30.000 ? ? ? 0.064 ? ? 1.109 2.7 ? 1076 94.6 10 1 # _refine.entry_id 4JK0 _refine.ls_d_res_high 2.300 _refine.ls_d_res_low 15.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.45 _refine.ls_number_reflns_obs 10506 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1867 _refine.ls_R_factor_R_work 0.1836 _refine.ls_wR_factor_R_work 0.1892 _refine.ls_R_factor_R_free 0.2455 _refine.ls_wR_factor_R_free 0.2580 _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 505 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 43.1562 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.9000 _refine.aniso_B[2][2] 0.9000 _refine.aniso_B[3][3] -2.9100 _refine.aniso_B[1][2] 0.9000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] -0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9520 _refine.correlation_coeff_Fo_to_Fc_free 0.9150 _refine.overall_SU_R_Cruickshank_DPI 0.2907 _refine.overall_SU_R_free 0.2316 _refine.pdbx_overall_ESU_R 0.2910 _refine.pdbx_overall_ESU_R_Free 0.2320 _refine.overall_SU_ML 0.1710 _refine.overall_SU_B 13.5120 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRY 1R9F' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8256 _refine.B_iso_max 273.720 _refine.B_iso_min 17.050 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 976 _refine_hist.pdbx_number_atoms_nucleic_acid 439 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 187 _refine_hist.number_atoms_total 1612 _refine_hist.d_res_high 2.300 _refine_hist.d_res_low 15.0 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1497 0.013 0.017 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1123 0.004 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2120 1.550 1.713 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 2609 0.990 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 118 5.645 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 50 32.652 22.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 166 15.668 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 10 16.810 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 224 0.090 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1360 0.007 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 364 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 477 2.042 2.822 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 477 2.041 2.822 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 593 3.160 4.205 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.300 _refine_ls_shell.d_res_low 2.358 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.27 _refine_ls_shell.number_reflns_R_work 696 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2260 _refine_ls_shell.R_factor_R_free 0.2720 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 43 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 739 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4JK0 _struct.title ;Crystal structure of T89Q-mutant of RNA silencing suppressor p19 with 2nt-5'-overhanging double-helical RNA 21mer pUUUG(CUG)5CU ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4JK0 _struct_keywords.text 'RNA silencing suppression, trinucleotide repeats, protein-RNA complex, dimer, RNA BINDING PROTEIN-RNA complex' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN/RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? # _struct_biol.id 1 _struct_biol.details 'THE BIOLOGICAL UNIT IS A P19 HOMODIMER BOUND TO DOUBLE-STRANDED RNA.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 16 ? THR A 27 ? SER D 16 THR D 27 1 ? 12 HELX_P HELX_P2 2 THR A 57 ? GLY A 66 ? THR D 57 GLY D 66 1 ? 10 HELX_P HELX_P3 3 THR A 69 ? ARG A 79 ? THR D 69 ARG D 79 1 ? 11 HELX_P HELX_P4 4 THR A 107 ? LEU A 125 ? THR D 107 LEU D 125 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? B U 3 N3 ? ? ? 1_555 B U 21 O2 ? ? B U 503 B U 521 4_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog2 hydrog ? ? B U 3 O4 ? ? ? 1_555 B U 21 N3 ? ? B U 503 B U 521 4_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog3 hydrog ? ? B G 4 N1 ? ? ? 1_555 B C 20 N3 ? ? B G 504 B C 520 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B G 4 N2 ? ? ? 1_555 B C 20 O2 ? ? B G 504 B C 520 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B G 4 O6 ? ? ? 1_555 B C 20 N4 ? ? B G 504 B C 520 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B C 5 N3 ? ? ? 1_555 B G 19 N1 ? ? B C 505 B G 519 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B C 5 N4 ? ? ? 1_555 B G 19 O6 ? ? B C 505 B G 519 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B C 5 O2 ? ? ? 1_555 B G 19 N2 ? ? B C 505 B G 519 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B U 6 N3 ? ? ? 1_555 B U 18 O2 ? ? B U 506 B U 518 4_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog10 hydrog ? ? B U 6 O4 ? ? ? 1_555 B U 18 N3 ? ? B U 506 B U 518 4_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog11 hydrog ? ? B G 7 N1 ? ? ? 1_555 B C 17 N3 ? ? B G 507 B C 517 4_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog12 hydrog ? ? B C 8 N3 ? ? ? 1_555 B G 16 N1 ? ? B C 508 B G 516 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B C 8 N4 ? ? ? 1_555 B G 16 O6 ? ? B C 508 B G 516 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B C 8 O2 ? ? ? 1_555 B G 16 N2 ? ? B C 508 B G 516 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B U 9 N3 ? ? ? 1_555 B U 15 O4 ? ? B U 509 B U 515 4_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog16 hydrog ? ? B G 10 N1 ? ? ? 1_555 B C 14 N3 ? ? B G 510 B C 514 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B G 10 N2 ? ? ? 1_555 B C 14 O2 ? ? B G 510 B C 514 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B G 10 O6 ? ? ? 1_555 B C 14 N4 ? ? B G 510 B C 514 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B C 11 N3 ? ? ? 1_555 B G 13 N1 ? ? B C 511 B G 513 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B C 11 N4 ? ? ? 1_555 B G 13 O6 ? ? B C 511 B G 513 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B C 11 O2 ? ? ? 1_555 B G 13 N2 ? ? B C 511 B G 513 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B G 13 N1 ? ? ? 1_555 B C 11 N3 ? ? B G 513 B C 511 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B G 13 N2 ? ? ? 1_555 B C 11 O2 ? ? B G 513 B C 511 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B G 13 O6 ? ? ? 1_555 B C 11 N4 ? ? B G 513 B C 511 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B C 14 N3 ? ? ? 1_555 B G 10 N1 ? ? B C 514 B G 510 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B C 14 N4 ? ? ? 1_555 B G 10 O6 ? ? B C 514 B G 510 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B C 14 O2 ? ? ? 1_555 B G 10 N2 ? ? B C 514 B G 510 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B U 15 O4 ? ? ? 1_555 B U 9 N3 ? ? B U 515 B U 509 4_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog29 hydrog ? ? B G 16 N1 ? ? ? 1_555 B C 8 N3 ? ? B G 516 B C 508 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B G 16 N2 ? ? ? 1_555 B C 8 O2 ? ? B G 516 B C 508 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B G 16 O6 ? ? ? 1_555 B C 8 N4 ? ? B G 516 B C 508 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B C 17 O2 ? ? ? 1_555 B G 7 N2 ? ? B C 517 B G 507 4_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog33 hydrog ? ? B U 18 N3 ? ? ? 1_555 B U 6 O4 ? ? B U 518 B U 506 4_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog34 hydrog ? ? B U 18 O2 ? ? ? 1_555 B U 6 N3 ? ? B U 518 B U 506 4_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog35 hydrog ? ? B G 19 N1 ? ? ? 1_555 B C 5 N3 ? ? B G 519 B C 505 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B G 19 N2 ? ? ? 1_555 B C 5 O2 ? ? B G 519 B C 505 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B G 19 O6 ? ? ? 1_555 B C 5 N4 ? ? B G 519 B C 505 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B C 20 N3 ? ? ? 1_555 B G 4 N1 ? ? B C 520 B G 504 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B C 20 N4 ? ? ? 1_555 B G 4 O6 ? ? B C 520 B G 504 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B C 20 O2 ? ? ? 1_555 B G 4 N2 ? ? B C 520 B G 504 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B U 21 N3 ? ? ? 1_555 B U 3 O4 ? ? B U 521 B U 503 4_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog42 hydrog ? ? B U 21 O2 ? ? ? 1_555 B U 3 N3 ? ? B U 521 B U 503 4_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 46 ? ARG A 53 ? VAL D 46 ARG D 53 A 2 GLY A 36 ? PHE A 43 ? GLY D 36 PHE D 43 A 3 GLY A 87 ? PHE A 94 ? GLY D 87 PHE D 94 A 4 VAL A 97 ? GLY A 104 ? VAL D 97 GLY D 104 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ARG A 50 ? O ARG D 50 N GLU A 39 ? N GLU D 39 A 2 3 N SER A 40 ? N SER D 40 O SER A 91 ? O SER D 91 A 3 4 N CYS A 88 ? N CYS D 88 O GLY A 103 ? O GLY D 103 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B SO4 601 ? 3 'BINDING SITE FOR RESIDUE SO4 B 601' AC2 Software B SO4 602 ? 4 'BINDING SITE FOR RESIDUE SO4 B 602' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 SER A 6 ? SER D 6 . ? 4_555 ? 2 AC1 3 PHE A 48 ? PHE D 48 . ? 4_555 ? 3 AC1 3 ARG A 50 ? ARG D 50 . ? 4_555 ? 4 AC2 4 SER A 16 ? SER D 16 . ? 4_555 ? 5 AC2 4 HIS A 62 ? HIS D 62 . ? 8_555 ? 6 AC2 4 HOH E . ? HOH D 237 . ? 4_555 ? 7 AC2 4 HOH E . ? HOH D 314 . ? 4_555 ? # _atom_sites.entry_id 4JK0 _atom_sites.fract_transf_matrix[1][1] 0.011063 _atom_sites.fract_transf_matrix[1][2] 0.006387 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012775 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006716 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 ? ? ? D . n A 1 2 SER 2 2 ? ? ? D . n A 1 3 HIS 3 3 3 HIS HIS D . n A 1 4 MET 4 4 4 MET MET D . n A 1 5 THR 5 5 5 THR THR D . n A 1 6 SER 6 6 6 SER SER D . n A 1 7 PRO 7 7 7 PRO PRO D . n A 1 8 PHE 8 8 8 PHE PHE D . n A 1 9 LYS 9 9 9 LYS LYS D . n A 1 10 LEU 10 10 10 LEU LEU D . n A 1 11 PRO 11 11 11 PRO PRO D . n A 1 12 ASP 12 12 12 ASP ASP D . n A 1 13 GLU 13 13 13 GLU GLU D . n A 1 14 SER 14 14 14 SER SER D . n A 1 15 PRO 15 15 15 PRO PRO D . n A 1 16 SER 16 16 16 SER SER D . n A 1 17 TRP 17 17 17 TRP TRP D . n A 1 18 THR 18 18 18 THR THR D . n A 1 19 GLU 19 19 19 GLU GLU D . n A 1 20 TRP 20 20 20 TRP TRP D . n A 1 21 ARG 21 21 21 ARG ARG D . n A 1 22 LEU 22 22 22 LEU LEU D . n A 1 23 HIS 23 23 23 HIS HIS D . n A 1 24 ASN 24 24 24 ASN ASN D . n A 1 25 ASP 25 25 25 ASP ASP D . n A 1 26 GLU 26 26 26 GLU GLU D . n A 1 27 THR 27 27 27 THR THR D . n A 1 28 ASN 28 28 ? ? ? D . n A 1 29 SER 29 29 ? ? ? D . n A 1 30 ASN 30 30 ? ? ? D . n A 1 31 GLN 31 31 ? ? ? D . n A 1 32 ASP 32 32 ? ? ? D . n A 1 33 ASN 33 33 33 ASN ASN D . n A 1 34 PRO 34 34 34 PRO PRO D . n A 1 35 LEU 35 35 35 LEU LEU D . n A 1 36 GLY 36 36 36 GLY GLY D . n A 1 37 PHE 37 37 37 PHE PHE D . n A 1 38 LYS 38 38 38 LYS LYS D . n A 1 39 GLU 39 39 39 GLU GLU D . n A 1 40 SER 40 40 40 SER SER D . n A 1 41 TRP 41 41 41 TRP TRP D . n A 1 42 GLY 42 42 42 GLY GLY D . n A 1 43 PHE 43 43 43 PHE PHE D . n A 1 44 GLY 44 44 44 GLY GLY D . n A 1 45 LYS 45 45 45 LYS LYS D . n A 1 46 VAL 46 46 46 VAL VAL D . n A 1 47 VAL 47 47 47 VAL VAL D . n A 1 48 PHE 48 48 48 PHE PHE D . n A 1 49 LYS 49 49 49 LYS LYS D . n A 1 50 ARG 50 50 50 ARG ARG D . n A 1 51 TYR 51 51 51 TYR TYR D . n A 1 52 LEU 52 52 52 LEU LEU D . n A 1 53 ARG 53 53 53 ARG ARG D . n A 1 54 TYR 54 54 54 TYR TYR D . n A 1 55 ASP 55 55 55 ASP ASP D . n A 1 56 ARG 56 56 56 ARG ARG D . n A 1 57 THR 57 57 57 THR THR D . n A 1 58 GLU 58 58 58 GLU GLU D . n A 1 59 ALA 59 59 59 ALA ALA D . n A 1 60 SER 60 60 60 SER SER D . n A 1 61 LEU 61 61 61 LEU LEU D . n A 1 62 HIS 62 62 62 HIS HIS D . n A 1 63 ARG 63 63 63 ARG ARG D . n A 1 64 VAL 64 64 64 VAL VAL D . n A 1 65 LEU 65 65 65 LEU LEU D . n A 1 66 GLY 66 66 66 GLY GLY D . n A 1 67 SER 67 67 67 SER SER D . n A 1 68 TRP 68 68 68 TRP TRP D . n A 1 69 THR 69 69 69 THR THR D . n A 1 70 GLY 70 70 70 GLY GLY D . n A 1 71 ASP 71 71 71 ASP ASP D . n A 1 72 SER 72 72 72 SER SER D . n A 1 73 VAL 73 73 73 VAL VAL D . n A 1 74 ASN 74 74 74 ASN ASN D . n A 1 75 TYR 75 75 75 TYR TYR D . n A 1 76 ALA 76 76 76 ALA ALA D . n A 1 77 ALA 77 77 77 ALA ALA D . n A 1 78 SER 78 78 78 SER SER D . n A 1 79 ARG 79 79 79 ARG ARG D . n A 1 80 PHE 80 80 80 PHE PHE D . n A 1 81 PHE 81 81 81 PHE PHE D . n A 1 82 GLY 82 82 82 GLY GLY D . n A 1 83 PHE 83 83 83 PHE PHE D . n A 1 84 ASP 84 84 84 ASP ASP D . n A 1 85 GLN 85 85 85 GLN GLN D . n A 1 86 ILE 86 86 86 ILE ILE D . n A 1 87 GLY 87 87 87 GLY GLY D . n A 1 88 CYS 88 88 88 CYS CYS D . n A 1 89 GLN 89 89 89 GLN GLN D . n A 1 90 TYR 90 90 90 TYR TYR D . n A 1 91 SER 91 91 91 SER SER D . n A 1 92 ILE 92 92 92 ILE ILE D . n A 1 93 ARG 93 93 93 ARG ARG D . n A 1 94 PHE 94 94 94 PHE PHE D . n A 1 95 ARG 95 95 95 ARG ARG D . n A 1 96 GLY 96 96 96 GLY GLY D . n A 1 97 VAL 97 97 97 VAL VAL D . n A 1 98 SER 98 98 98 SER SER D . n A 1 99 ILE 99 99 99 ILE ILE D . n A 1 100 THR 100 100 100 THR THR D . n A 1 101 VAL 101 101 101 VAL VAL D . n A 1 102 SER 102 102 102 SER SER D . n A 1 103 GLY 103 103 103 GLY GLY D . n A 1 104 GLY 104 104 104 GLY GLY D . n A 1 105 SER 105 105 105 SER SER D . n A 1 106 ARG 106 106 106 ARG ARG D . n A 1 107 THR 107 107 107 THR THR D . n A 1 108 LEU 108 108 108 LEU LEU D . n A 1 109 GLN 109 109 109 GLN GLN D . n A 1 110 HIS 110 110 110 HIS HIS D . n A 1 111 LEU 111 111 111 LEU LEU D . n A 1 112 CYS 112 112 112 CYS CYS D . n A 1 113 GLU 113 113 113 GLU GLU D . n A 1 114 MET 114 114 114 MET MET D . n A 1 115 ALA 115 115 115 ALA ALA D . n A 1 116 ILE 116 116 116 ILE ILE D . n A 1 117 ARG 117 117 117 ARG ARG D . n A 1 118 SER 118 118 118 SER SER D . n A 1 119 LYS 119 119 119 LYS LYS D . n A 1 120 GLN 120 120 120 GLN GLN D . n A 1 121 GLU 121 121 121 GLU GLU D . n A 1 122 LEU 122 122 122 LEU LEU D . n A 1 123 LEU 123 123 123 LEU LEU D . n A 1 124 GLN 124 124 124 GLN GLN D . n A 1 125 LEU 125 125 125 LEU LEU D . n A 1 126 ALA 126 126 126 ALA ALA D . n A 1 127 PRO 127 127 127 PRO PRO D . n B 2 1 U 1 501 501 U U B . n B 2 2 U 2 502 502 U U B . n B 2 3 U 3 503 503 U U B . n B 2 4 G 4 504 504 G G B . n B 2 5 C 5 505 505 C C B . n B 2 6 U 6 506 506 U U B . n B 2 7 G 7 507 507 G G B . n B 2 8 C 8 508 508 C C B . n B 2 9 U 9 509 509 U U B . n B 2 10 G 10 510 510 G G B . n B 2 11 C 11 511 511 C C B . n B 2 12 U 12 512 512 U U B . n B 2 13 G 13 513 513 G G B . n B 2 14 C 14 514 514 C C B . n B 2 15 U 15 515 515 U U B . n B 2 16 G 16 516 516 G G B . n B 2 17 C 17 517 517 C C B . n B 2 18 U 18 518 518 U U B . n B 2 19 G 19 519 519 G G B . n B 2 20 C 20 520 520 C C B . n B 2 21 U 21 521 521 U U B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 1 601 301 SO4 SO4 B . D 3 SO4 1 602 302 SO4 SO4 B . E 4 HOH 1 201 1 HOH HOH D . E 4 HOH 2 202 2 HOH HOH D . E 4 HOH 3 203 3 HOH HOH D . E 4 HOH 4 204 4 HOH HOH D . E 4 HOH 5 205 5 HOH HOH D . E 4 HOH 6 206 6 HOH HOH D . E 4 HOH 7 207 8 HOH HOH D . E 4 HOH 8 208 9 HOH HOH D . E 4 HOH 9 209 10 HOH HOH D . E 4 HOH 10 210 11 HOH HOH D . E 4 HOH 11 211 12 HOH HOH D . E 4 HOH 12 212 13 HOH HOH D . E 4 HOH 13 213 14 HOH HOH D . E 4 HOH 14 214 15 HOH HOH D . E 4 HOH 15 215 16 HOH HOH D . E 4 HOH 16 216 17 HOH HOH D . E 4 HOH 17 217 19 HOH HOH D . E 4 HOH 18 218 20 HOH HOH D . E 4 HOH 19 219 21 HOH HOH D . E 4 HOH 20 220 22 HOH HOH D . E 4 HOH 21 221 24 HOH HOH D . E 4 HOH 22 222 25 HOH HOH D . E 4 HOH 23 223 26 HOH HOH D . E 4 HOH 24 224 27 HOH HOH D . E 4 HOH 25 225 28 HOH HOH D . E 4 HOH 26 226 31 HOH HOH D . E 4 HOH 27 227 32 HOH HOH D . E 4 HOH 28 228 33 HOH HOH D . E 4 HOH 29 229 34 HOH HOH D . E 4 HOH 30 230 37 HOH HOH D . E 4 HOH 31 231 38 HOH HOH D . E 4 HOH 32 232 39 HOH HOH D . E 4 HOH 33 233 40 HOH HOH D . E 4 HOH 34 234 44 HOH HOH D . E 4 HOH 35 235 46 HOH HOH D . E 4 HOH 36 236 47 HOH HOH D . E 4 HOH 37 237 50 HOH HOH D . E 4 HOH 38 238 51 HOH HOH D . E 4 HOH 39 239 52 HOH HOH D . E 4 HOH 40 240 57 HOH HOH D . E 4 HOH 41 241 58 HOH HOH D . E 4 HOH 42 242 59 HOH HOH D . E 4 HOH 43 243 60 HOH HOH D . E 4 HOH 44 244 62 HOH HOH D . E 4 HOH 45 245 63 HOH HOH D . E 4 HOH 46 246 64 HOH HOH D . E 4 HOH 47 247 65 HOH HOH D . E 4 HOH 48 248 66 HOH HOH D . E 4 HOH 49 249 67 HOH HOH D . E 4 HOH 50 250 68 HOH HOH D . E 4 HOH 51 251 69 HOH HOH D . E 4 HOH 52 252 73 HOH HOH D . E 4 HOH 53 253 74 HOH HOH D . E 4 HOH 54 254 76 HOH HOH D . E 4 HOH 55 255 77 HOH HOH D . E 4 HOH 56 256 79 HOH HOH D . E 4 HOH 57 257 80 HOH HOH D . E 4 HOH 58 258 82 HOH HOH D . E 4 HOH 59 259 85 HOH HOH D . E 4 HOH 60 260 86 HOH HOH D . E 4 HOH 61 261 87 HOH HOH D . E 4 HOH 62 262 88 HOH HOH D . E 4 HOH 63 263 89 HOH HOH D . E 4 HOH 64 264 90 HOH HOH D . E 4 HOH 65 265 92 HOH HOH D . E 4 HOH 66 266 93 HOH HOH D . E 4 HOH 67 267 94 HOH HOH D . E 4 HOH 68 268 95 HOH HOH D . E 4 HOH 69 269 98 HOH HOH D . E 4 HOH 70 270 99 HOH HOH D . E 4 HOH 71 271 103 HOH HOH D . E 4 HOH 72 272 104 HOH HOH D . E 4 HOH 73 273 110 HOH HOH D . E 4 HOH 74 274 111 HOH HOH D . E 4 HOH 75 275 112 HOH HOH D . E 4 HOH 76 276 113 HOH HOH D . E 4 HOH 77 277 114 HOH HOH D . E 4 HOH 78 278 115 HOH HOH D . E 4 HOH 79 279 117 HOH HOH D . E 4 HOH 80 280 118 HOH HOH D . E 4 HOH 81 281 119 HOH HOH D . E 4 HOH 82 282 121 HOH HOH D . E 4 HOH 83 283 123 HOH HOH D . E 4 HOH 84 284 125 HOH HOH D . E 4 HOH 85 285 126 HOH HOH D . E 4 HOH 86 286 127 HOH HOH D . E 4 HOH 87 287 128 HOH HOH D . E 4 HOH 88 288 129 HOH HOH D . E 4 HOH 89 289 130 HOH HOH D . E 4 HOH 90 290 132 HOH HOH D . E 4 HOH 91 291 134 HOH HOH D . E 4 HOH 92 292 135 HOH HOH D . E 4 HOH 93 293 136 HOH HOH D . E 4 HOH 94 294 139 HOH HOH D . E 4 HOH 95 295 140 HOH HOH D . E 4 HOH 96 296 141 HOH HOH D . E 4 HOH 97 297 142 HOH HOH D . E 4 HOH 98 298 143 HOH HOH D . E 4 HOH 99 299 145 HOH HOH D . E 4 HOH 100 300 146 HOH HOH D . E 4 HOH 101 301 147 HOH HOH D . E 4 HOH 102 302 148 HOH HOH D . E 4 HOH 103 303 149 HOH HOH D . E 4 HOH 104 304 150 HOH HOH D . E 4 HOH 105 305 151 HOH HOH D . E 4 HOH 106 306 152 HOH HOH D . E 4 HOH 107 307 153 HOH HOH D . E 4 HOH 108 308 154 HOH HOH D . E 4 HOH 109 309 155 HOH HOH D . E 4 HOH 110 310 156 HOH HOH D . E 4 HOH 111 311 157 HOH HOH D . E 4 HOH 112 312 158 HOH HOH D . E 4 HOH 113 313 160 HOH HOH D . E 4 HOH 114 314 161 HOH HOH D . E 4 HOH 115 315 162 HOH HOH D . E 4 HOH 116 316 163 HOH HOH D . E 4 HOH 117 317 164 HOH HOH D . E 4 HOH 118 318 165 HOH HOH D . E 4 HOH 119 319 166 HOH HOH D . E 4 HOH 120 320 167 HOH HOH D . E 4 HOH 121 321 169 HOH HOH D . E 4 HOH 122 322 170 HOH HOH D . E 4 HOH 123 323 171 HOH HOH D . E 4 HOH 124 324 172 HOH HOH D . E 4 HOH 125 325 173 HOH HOH D . E 4 HOH 126 326 174 HOH HOH D . E 4 HOH 127 327 175 HOH HOH D . E 4 HOH 128 328 176 HOH HOH D . E 4 HOH 129 329 177 HOH HOH D . E 4 HOH 130 330 178 HOH HOH D . E 4 HOH 131 331 179 HOH HOH D . E 4 HOH 132 332 180 HOH HOH D . E 4 HOH 133 333 181 HOH HOH D . E 4 HOH 134 334 182 HOH HOH D . E 4 HOH 135 335 183 HOH HOH D . F 4 HOH 1 701 7 HOH HOH B . F 4 HOH 2 702 18 HOH HOH B . F 4 HOH 3 703 23 HOH HOH B . F 4 HOH 4 704 29 HOH HOH B . F 4 HOH 5 705 30 HOH HOH B . F 4 HOH 6 706 35 HOH HOH B . F 4 HOH 7 707 36 HOH HOH B . F 4 HOH 8 708 41 HOH HOH B . F 4 HOH 9 709 42 HOH HOH B . F 4 HOH 10 710 43 HOH HOH B . F 4 HOH 11 711 45 HOH HOH B . F 4 HOH 12 712 48 HOH HOH B . F 4 HOH 13 713 49 HOH HOH B . F 4 HOH 14 714 53 HOH HOH B . F 4 HOH 15 715 54 HOH HOH B . F 4 HOH 16 716 55 HOH HOH B . F 4 HOH 17 717 56 HOH HOH B . F 4 HOH 18 718 61 HOH HOH B . F 4 HOH 19 719 70 HOH HOH B . F 4 HOH 20 720 71 HOH HOH B . F 4 HOH 21 721 72 HOH HOH B . F 4 HOH 22 722 75 HOH HOH B . F 4 HOH 23 723 78 HOH HOH B . F 4 HOH 24 724 81 HOH HOH B . F 4 HOH 25 725 83 HOH HOH B . F 4 HOH 26 726 84 HOH HOH B . F 4 HOH 27 727 91 HOH HOH B . F 4 HOH 28 728 96 HOH HOH B . F 4 HOH 29 729 97 HOH HOH B . F 4 HOH 30 730 100 HOH HOH B . F 4 HOH 31 731 101 HOH HOH B . F 4 HOH 32 732 102 HOH HOH B . F 4 HOH 33 733 105 HOH HOH B . F 4 HOH 34 734 106 HOH HOH B . F 4 HOH 35 735 107 HOH HOH B . F 4 HOH 36 736 108 HOH HOH B . F 4 HOH 37 737 109 HOH HOH B . F 4 HOH 38 738 116 HOH HOH B . F 4 HOH 39 739 120 HOH HOH B . F 4 HOH 40 740 122 HOH HOH B . F 4 HOH 41 741 124 HOH HOH B . F 4 HOH 42 742 131 HOH HOH B . F 4 HOH 43 743 133 HOH HOH B . F 4 HOH 44 744 137 HOH HOH B . F 4 HOH 45 745 138 HOH HOH B . F 4 HOH 46 746 144 HOH HOH B . F 4 HOH 47 747 159 HOH HOH B . F 4 HOH 48 748 168 HOH HOH B . F 4 HOH 49 749 184 HOH HOH B . F 4 HOH 50 750 185 HOH HOH B . F 4 HOH 51 751 186 HOH HOH B . F 4 HOH 52 752 187 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8920 ? 1 MORE -128 ? 1 'SSA (A^2)' 16910 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_555 y,x,-z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 D HOH 272 ? E HOH . 2 1 D HOH 308 ? E HOH . 3 1 B HOH 719 ? F HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-03-12 2 'Structure model' 1 1 2017-11-15 3 'Structure model' 1 2 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' pdbx_initial_refinement_model 6 3 'Structure model' struct_ref_seq_dif 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_software.classification' 2 2 'Structure model' '_software.contact_author' 3 2 'Structure model' '_software.contact_author_email' 4 2 'Structure model' '_software.date' 5 2 'Structure model' '_software.language' 6 2 'Structure model' '_software.location' 7 2 'Structure model' '_software.name' 8 2 'Structure model' '_software.type' 9 2 'Structure model' '_software.version' 10 3 'Structure model' '_database_2.pdbx_DOI' 11 3 'Structure model' '_database_2.pdbx_database_accession' 12 3 'Structure model' '_struct_ref_seq_dif.details' 13 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 14 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 15 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 23.4429 29.4168 -10.8632 0.0112 0.0127 0.0124 0.0004 0.0103 -0.0031 0.4755 0.5550 1.1002 -0.1376 0.2471 0.0730 -0.0123 -0.0197 0.0320 -0.0132 -0.0114 -0.0234 -0.0097 0.0041 -0.0197 'X-RAY DIFFRACTION' 2 ? refined 26.5582 45.1048 -0.1984 0.0708 0.0920 0.0140 -0.0468 0.0043 -0.0082 0.1590 0.4358 0.2981 0.0336 -0.1460 0.2145 0.0327 -0.0250 -0.0077 -0.0506 0.0299 0.0649 0.0063 -0.0714 0.0879 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 D 3 D 127 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B 501 B 521 ? . . . . ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 6 REFMAC . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O D HOH 216 ? ? O D HOH 333 ? ? 1.79 2 1 O D HOH 249 ? ? O D HOH 310 ? ? 1.84 3 1 O D LEU 52 ? ? O D HOH 301 ? ? 1.90 4 1 O D HOH 232 ? ? O D HOH 288 ? ? 1.91 5 1 O D HOH 216 ? ? O D HOH 309 ? ? 1.94 6 1 O D GLU 113 ? ? O D HOH 313 ? ? 1.97 7 1 O D VAL 73 ? ? O D HOH 281 ? ? 2.00 8 1 "O2'" B U 502 ? ? O B HOH 706 ? ? 2.03 9 1 "O2'" B U 501 ? ? O B HOH 741 ? ? 2.04 10 1 N D ARG 56 ? ? O D HOH 294 ? ? 2.04 11 1 N D ARG 117 ? ? O D HOH 313 ? ? 2.05 12 1 O D LYS 38 ? ? O D HOH 305 ? ? 2.09 13 1 O D ALA 77 ? ? O D HOH 303 ? ? 2.11 14 1 O D ILE 116 ? ? O D HOH 279 ? ? 2.11 15 1 NZ D LYS 119 ? ? O D HOH 285 ? ? 2.13 16 1 OG D SER 67 ? ? O D HOH 285 ? ? 2.17 17 1 OH D TYR 51 ? ? O D HOH 273 ? ? 2.17 18 1 OE1 D GLN 120 ? ? O D HOH 288 ? ? 2.19 19 1 C D THR 27 ? ? O D HOH 321 ? ? 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 OG D SER 118 ? ? 1_555 O D HOH 298 ? ? 4_555 2.13 2 1 O4 B U 512 ? ? 1_555 O4 B U 512 ? ? 4_555 2.19 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 U _pdbx_validate_rmsd_bond.auth_seq_id_1 501 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 U _pdbx_validate_rmsd_bond.auth_seq_id_2 501 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.497 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.110 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id D _pdbx_unobs_or_zero_occ_atoms.auth_comp_id PRO _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 127 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id O _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id A _pdbx_unobs_or_zero_occ_atoms.label_comp_id PRO _pdbx_unobs_or_zero_occ_atoms.label_seq_id 127 _pdbx_unobs_or_zero_occ_atoms.label_atom_id O # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 D GLY 1 ? A GLY 1 2 1 Y 1 D SER 2 ? A SER 2 3 1 Y 1 D ASN 28 ? A ASN 28 4 1 Y 1 D SER 29 ? A SER 29 5 1 Y 1 D ASN 30 ? A ASN 30 6 1 Y 1 D GLN 31 ? A GLN 31 7 1 Y 1 D ASP 32 ? A ASP 32 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 C OP3 O N N 74 C P P N N 75 C OP1 O N N 76 C OP2 O N N 77 C "O5'" O N N 78 C "C5'" C N N 79 C "C4'" C N R 80 C "O4'" O N N 81 C "C3'" C N S 82 C "O3'" O N N 83 C "C2'" C N R 84 C "O2'" O N N 85 C "C1'" C N R 86 C N1 N N N 87 C C2 C N N 88 C O2 O N N 89 C N3 N N N 90 C C4 C N N 91 C N4 N N N 92 C C5 C N N 93 C C6 C N N 94 C HOP3 H N N 95 C HOP2 H N N 96 C "H5'" H N N 97 C "H5''" H N N 98 C "H4'" H N N 99 C "H3'" H N N 100 C "HO3'" H N N 101 C "H2'" H N N 102 C "HO2'" H N N 103 C "H1'" H N N 104 C H41 H N N 105 C H42 H N N 106 C H5 H N N 107 C H6 H N N 108 CYS N N N N 109 CYS CA C N R 110 CYS C C N N 111 CYS O O N N 112 CYS CB C N N 113 CYS SG S N N 114 CYS OXT O N N 115 CYS H H N N 116 CYS H2 H N N 117 CYS HA H N N 118 CYS HB2 H N N 119 CYS HB3 H N N 120 CYS HG H N N 121 CYS HXT H N N 122 G OP3 O N N 123 G P P N N 124 G OP1 O N N 125 G OP2 O N N 126 G "O5'" O N N 127 G "C5'" C N N 128 G "C4'" C N R 129 G "O4'" O N N 130 G "C3'" C N S 131 G "O3'" O N N 132 G "C2'" C N R 133 G "O2'" O N N 134 G "C1'" C N R 135 G N9 N Y N 136 G C8 C Y N 137 G N7 N Y N 138 G C5 C Y N 139 G C6 C N N 140 G O6 O N N 141 G N1 N N N 142 G C2 C N N 143 G N2 N N N 144 G N3 N N N 145 G C4 C Y N 146 G HOP3 H N N 147 G HOP2 H N N 148 G "H5'" H N N 149 G "H5''" H N N 150 G "H4'" H N N 151 G "H3'" H N N 152 G "HO3'" H N N 153 G "H2'" H N N 154 G "HO2'" H N N 155 G "H1'" H N N 156 G H8 H N N 157 G H1 H N N 158 G H21 H N N 159 G H22 H N N 160 GLN N N N N 161 GLN CA C N S 162 GLN C C N N 163 GLN O O N N 164 GLN CB C N N 165 GLN CG C N N 166 GLN CD C N N 167 GLN OE1 O N N 168 GLN NE2 N N N 169 GLN OXT O N N 170 GLN H H N N 171 GLN H2 H N N 172 GLN HA H N N 173 GLN HB2 H N N 174 GLN HB3 H N N 175 GLN HG2 H N N 176 GLN HG3 H N N 177 GLN HE21 H N N 178 GLN HE22 H N N 179 GLN HXT H N N 180 GLU N N N N 181 GLU CA C N S 182 GLU C C N N 183 GLU O O N N 184 GLU CB C N N 185 GLU CG C N N 186 GLU CD C N N 187 GLU OE1 O N N 188 GLU OE2 O N N 189 GLU OXT O N N 190 GLU H H N N 191 GLU H2 H N N 192 GLU HA H N N 193 GLU HB2 H N N 194 GLU HB3 H N N 195 GLU HG2 H N N 196 GLU HG3 H N N 197 GLU HE2 H N N 198 GLU HXT H N N 199 GLY N N N N 200 GLY CA C N N 201 GLY C C N N 202 GLY O O N N 203 GLY OXT O N N 204 GLY H H N N 205 GLY H2 H N N 206 GLY HA2 H N N 207 GLY HA3 H N N 208 GLY HXT H N N 209 HIS N N N N 210 HIS CA C N S 211 HIS C C N N 212 HIS O O N N 213 HIS CB C N N 214 HIS CG C Y N 215 HIS ND1 N Y N 216 HIS CD2 C Y N 217 HIS CE1 C Y N 218 HIS NE2 N Y N 219 HIS OXT O N N 220 HIS H H N N 221 HIS H2 H N N 222 HIS HA H N N 223 HIS HB2 H N N 224 HIS HB3 H N N 225 HIS HD1 H N N 226 HIS HD2 H N N 227 HIS HE1 H N N 228 HIS HE2 H N N 229 HIS HXT H N N 230 HOH O O N N 231 HOH H1 H N N 232 HOH H2 H N N 233 ILE N N N N 234 ILE CA C N S 235 ILE C C N N 236 ILE O O N N 237 ILE CB C N S 238 ILE CG1 C N N 239 ILE CG2 C N N 240 ILE CD1 C N N 241 ILE OXT O N N 242 ILE H H N N 243 ILE H2 H N N 244 ILE HA H N N 245 ILE HB H N N 246 ILE HG12 H N N 247 ILE HG13 H N N 248 ILE HG21 H N N 249 ILE HG22 H N N 250 ILE HG23 H N N 251 ILE HD11 H N N 252 ILE HD12 H N N 253 ILE HD13 H N N 254 ILE HXT H N N 255 LEU N N N N 256 LEU CA C N S 257 LEU C C N N 258 LEU O O N N 259 LEU CB C N N 260 LEU CG C N N 261 LEU CD1 C N N 262 LEU CD2 C N N 263 LEU OXT O N N 264 LEU H H N N 265 LEU H2 H N N 266 LEU HA H N N 267 LEU HB2 H N N 268 LEU HB3 H N N 269 LEU HG H N N 270 LEU HD11 H N N 271 LEU HD12 H N N 272 LEU HD13 H N N 273 LEU HD21 H N N 274 LEU HD22 H N N 275 LEU HD23 H N N 276 LEU HXT H N N 277 LYS N N N N 278 LYS CA C N S 279 LYS C C N N 280 LYS O O N N 281 LYS CB C N N 282 LYS CG C N N 283 LYS CD C N N 284 LYS CE C N N 285 LYS NZ N N N 286 LYS OXT O N N 287 LYS H H N N 288 LYS H2 H N N 289 LYS HA H N N 290 LYS HB2 H N N 291 LYS HB3 H N N 292 LYS HG2 H N N 293 LYS HG3 H N N 294 LYS HD2 H N N 295 LYS HD3 H N N 296 LYS HE2 H N N 297 LYS HE3 H N N 298 LYS HZ1 H N N 299 LYS HZ2 H N N 300 LYS HZ3 H N N 301 LYS HXT H N N 302 MET N N N N 303 MET CA C N S 304 MET C C N N 305 MET O O N N 306 MET CB C N N 307 MET CG C N N 308 MET SD S N N 309 MET CE C N N 310 MET OXT O N N 311 MET H H N N 312 MET H2 H N N 313 MET HA H N N 314 MET HB2 H N N 315 MET HB3 H N N 316 MET HG2 H N N 317 MET HG3 H N N 318 MET HE1 H N N 319 MET HE2 H N N 320 MET HE3 H N N 321 MET HXT H N N 322 PHE N N N N 323 PHE CA C N S 324 PHE C C N N 325 PHE O O N N 326 PHE CB C N N 327 PHE CG C Y N 328 PHE CD1 C Y N 329 PHE CD2 C Y N 330 PHE CE1 C Y N 331 PHE CE2 C Y N 332 PHE CZ C Y N 333 PHE OXT O N N 334 PHE H H N N 335 PHE H2 H N N 336 PHE HA H N N 337 PHE HB2 H N N 338 PHE HB3 H N N 339 PHE HD1 H N N 340 PHE HD2 H N N 341 PHE HE1 H N N 342 PHE HE2 H N N 343 PHE HZ H N N 344 PHE HXT H N N 345 PRO N N N N 346 PRO CA C N S 347 PRO C C N N 348 PRO O O N N 349 PRO CB C N N 350 PRO CG C N N 351 PRO CD C N N 352 PRO OXT O N N 353 PRO H H N N 354 PRO HA H N N 355 PRO HB2 H N N 356 PRO HB3 H N N 357 PRO HG2 H N N 358 PRO HG3 H N N 359 PRO HD2 H N N 360 PRO HD3 H N N 361 PRO HXT H N N 362 SER N N N N 363 SER CA C N S 364 SER C C N N 365 SER O O N N 366 SER CB C N N 367 SER OG O N N 368 SER OXT O N N 369 SER H H N N 370 SER H2 H N N 371 SER HA H N N 372 SER HB2 H N N 373 SER HB3 H N N 374 SER HG H N N 375 SER HXT H N N 376 SO4 S S N N 377 SO4 O1 O N N 378 SO4 O2 O N N 379 SO4 O3 O N N 380 SO4 O4 O N N 381 THR N N N N 382 THR CA C N S 383 THR C C N N 384 THR O O N N 385 THR CB C N R 386 THR OG1 O N N 387 THR CG2 C N N 388 THR OXT O N N 389 THR H H N N 390 THR H2 H N N 391 THR HA H N N 392 THR HB H N N 393 THR HG1 H N N 394 THR HG21 H N N 395 THR HG22 H N N 396 THR HG23 H N N 397 THR HXT H N N 398 TRP N N N N 399 TRP CA C N S 400 TRP C C N N 401 TRP O O N N 402 TRP CB C N N 403 TRP CG C Y N 404 TRP CD1 C Y N 405 TRP CD2 C Y N 406 TRP NE1 N Y N 407 TRP CE2 C Y N 408 TRP CE3 C Y N 409 TRP CZ2 C Y N 410 TRP CZ3 C Y N 411 TRP CH2 C Y N 412 TRP OXT O N N 413 TRP H H N N 414 TRP H2 H N N 415 TRP HA H N N 416 TRP HB2 H N N 417 TRP HB3 H N N 418 TRP HD1 H N N 419 TRP HE1 H N N 420 TRP HE3 H N N 421 TRP HZ2 H N N 422 TRP HZ3 H N N 423 TRP HH2 H N N 424 TRP HXT H N N 425 TYR N N N N 426 TYR CA C N S 427 TYR C C N N 428 TYR O O N N 429 TYR CB C N N 430 TYR CG C Y N 431 TYR CD1 C Y N 432 TYR CD2 C Y N 433 TYR CE1 C Y N 434 TYR CE2 C Y N 435 TYR CZ C Y N 436 TYR OH O N N 437 TYR OXT O N N 438 TYR H H N N 439 TYR H2 H N N 440 TYR HA H N N 441 TYR HB2 H N N 442 TYR HB3 H N N 443 TYR HD1 H N N 444 TYR HD2 H N N 445 TYR HE1 H N N 446 TYR HE2 H N N 447 TYR HH H N N 448 TYR HXT H N N 449 U OP3 O N N 450 U P P N N 451 U OP1 O N N 452 U OP2 O N N 453 U "O5'" O N N 454 U "C5'" C N N 455 U "C4'" C N R 456 U "O4'" O N N 457 U "C3'" C N S 458 U "O3'" O N N 459 U "C2'" C N R 460 U "O2'" O N N 461 U "C1'" C N R 462 U N1 N N N 463 U C2 C N N 464 U O2 O N N 465 U N3 N N N 466 U C4 C N N 467 U O4 O N N 468 U C5 C N N 469 U C6 C N N 470 U HOP3 H N N 471 U HOP2 H N N 472 U "H5'" H N N 473 U "H5''" H N N 474 U "H4'" H N N 475 U "H3'" H N N 476 U "HO3'" H N N 477 U "H2'" H N N 478 U "HO2'" H N N 479 U "H1'" H N N 480 U H3 H N N 481 U H5 H N N 482 U H6 H N N 483 VAL N N N N 484 VAL CA C N S 485 VAL C C N N 486 VAL O O N N 487 VAL CB C N N 488 VAL CG1 C N N 489 VAL CG2 C N N 490 VAL OXT O N N 491 VAL H H N N 492 VAL H2 H N N 493 VAL HA H N N 494 VAL HB H N N 495 VAL HG11 H N N 496 VAL HG12 H N N 497 VAL HG13 H N N 498 VAL HG21 H N N 499 VAL HG22 H N N 500 VAL HG23 H N N 501 VAL HXT H N N 502 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 C OP3 P sing N N 70 C OP3 HOP3 sing N N 71 C P OP1 doub N N 72 C P OP2 sing N N 73 C P "O5'" sing N N 74 C OP2 HOP2 sing N N 75 C "O5'" "C5'" sing N N 76 C "C5'" "C4'" sing N N 77 C "C5'" "H5'" sing N N 78 C "C5'" "H5''" sing N N 79 C "C4'" "O4'" sing N N 80 C "C4'" "C3'" sing N N 81 C "C4'" "H4'" sing N N 82 C "O4'" "C1'" sing N N 83 C "C3'" "O3'" sing N N 84 C "C3'" "C2'" sing N N 85 C "C3'" "H3'" sing N N 86 C "O3'" "HO3'" sing N N 87 C "C2'" "O2'" sing N N 88 C "C2'" "C1'" sing N N 89 C "C2'" "H2'" sing N N 90 C "O2'" "HO2'" sing N N 91 C "C1'" N1 sing N N 92 C "C1'" "H1'" sing N N 93 C N1 C2 sing N N 94 C N1 C6 sing N N 95 C C2 O2 doub N N 96 C C2 N3 sing N N 97 C N3 C4 doub N N 98 C C4 N4 sing N N 99 C C4 C5 sing N N 100 C N4 H41 sing N N 101 C N4 H42 sing N N 102 C C5 C6 doub N N 103 C C5 H5 sing N N 104 C C6 H6 sing N N 105 CYS N CA sing N N 106 CYS N H sing N N 107 CYS N H2 sing N N 108 CYS CA C sing N N 109 CYS CA CB sing N N 110 CYS CA HA sing N N 111 CYS C O doub N N 112 CYS C OXT sing N N 113 CYS CB SG sing N N 114 CYS CB HB2 sing N N 115 CYS CB HB3 sing N N 116 CYS SG HG sing N N 117 CYS OXT HXT sing N N 118 G OP3 P sing N N 119 G OP3 HOP3 sing N N 120 G P OP1 doub N N 121 G P OP2 sing N N 122 G P "O5'" sing N N 123 G OP2 HOP2 sing N N 124 G "O5'" "C5'" sing N N 125 G "C5'" "C4'" sing N N 126 G "C5'" "H5'" sing N N 127 G "C5'" "H5''" sing N N 128 G "C4'" "O4'" sing N N 129 G "C4'" "C3'" sing N N 130 G "C4'" "H4'" sing N N 131 G "O4'" "C1'" sing N N 132 G "C3'" "O3'" sing N N 133 G "C3'" "C2'" sing N N 134 G "C3'" "H3'" sing N N 135 G "O3'" "HO3'" sing N N 136 G "C2'" "O2'" sing N N 137 G "C2'" "C1'" sing N N 138 G "C2'" "H2'" sing N N 139 G "O2'" "HO2'" sing N N 140 G "C1'" N9 sing N N 141 G "C1'" "H1'" sing N N 142 G N9 C8 sing Y N 143 G N9 C4 sing Y N 144 G C8 N7 doub Y N 145 G C8 H8 sing N N 146 G N7 C5 sing Y N 147 G C5 C6 sing N N 148 G C5 C4 doub Y N 149 G C6 O6 doub N N 150 G C6 N1 sing N N 151 G N1 C2 sing N N 152 G N1 H1 sing N N 153 G C2 N2 sing N N 154 G C2 N3 doub N N 155 G N2 H21 sing N N 156 G N2 H22 sing N N 157 G N3 C4 sing N N 158 GLN N CA sing N N 159 GLN N H sing N N 160 GLN N H2 sing N N 161 GLN CA C sing N N 162 GLN CA CB sing N N 163 GLN CA HA sing N N 164 GLN C O doub N N 165 GLN C OXT sing N N 166 GLN CB CG sing N N 167 GLN CB HB2 sing N N 168 GLN CB HB3 sing N N 169 GLN CG CD sing N N 170 GLN CG HG2 sing N N 171 GLN CG HG3 sing N N 172 GLN CD OE1 doub N N 173 GLN CD NE2 sing N N 174 GLN NE2 HE21 sing N N 175 GLN NE2 HE22 sing N N 176 GLN OXT HXT sing N N 177 GLU N CA sing N N 178 GLU N H sing N N 179 GLU N H2 sing N N 180 GLU CA C sing N N 181 GLU CA CB sing N N 182 GLU CA HA sing N N 183 GLU C O doub N N 184 GLU C OXT sing N N 185 GLU CB CG sing N N 186 GLU CB HB2 sing N N 187 GLU CB HB3 sing N N 188 GLU CG CD sing N N 189 GLU CG HG2 sing N N 190 GLU CG HG3 sing N N 191 GLU CD OE1 doub N N 192 GLU CD OE2 sing N N 193 GLU OE2 HE2 sing N N 194 GLU OXT HXT sing N N 195 GLY N CA sing N N 196 GLY N H sing N N 197 GLY N H2 sing N N 198 GLY CA C sing N N 199 GLY CA HA2 sing N N 200 GLY CA HA3 sing N N 201 GLY C O doub N N 202 GLY C OXT sing N N 203 GLY OXT HXT sing N N 204 HIS N CA sing N N 205 HIS N H sing N N 206 HIS N H2 sing N N 207 HIS CA C sing N N 208 HIS CA CB sing N N 209 HIS CA HA sing N N 210 HIS C O doub N N 211 HIS C OXT sing N N 212 HIS CB CG sing N N 213 HIS CB HB2 sing N N 214 HIS CB HB3 sing N N 215 HIS CG ND1 sing Y N 216 HIS CG CD2 doub Y N 217 HIS ND1 CE1 doub Y N 218 HIS ND1 HD1 sing N N 219 HIS CD2 NE2 sing Y N 220 HIS CD2 HD2 sing N N 221 HIS CE1 NE2 sing Y N 222 HIS CE1 HE1 sing N N 223 HIS NE2 HE2 sing N N 224 HIS OXT HXT sing N N 225 HOH O H1 sing N N 226 HOH O H2 sing N N 227 ILE N CA sing N N 228 ILE N H sing N N 229 ILE N H2 sing N N 230 ILE CA C sing N N 231 ILE CA CB sing N N 232 ILE CA HA sing N N 233 ILE C O doub N N 234 ILE C OXT sing N N 235 ILE CB CG1 sing N N 236 ILE CB CG2 sing N N 237 ILE CB HB sing N N 238 ILE CG1 CD1 sing N N 239 ILE CG1 HG12 sing N N 240 ILE CG1 HG13 sing N N 241 ILE CG2 HG21 sing N N 242 ILE CG2 HG22 sing N N 243 ILE CG2 HG23 sing N N 244 ILE CD1 HD11 sing N N 245 ILE CD1 HD12 sing N N 246 ILE CD1 HD13 sing N N 247 ILE OXT HXT sing N N 248 LEU N CA sing N N 249 LEU N H sing N N 250 LEU N H2 sing N N 251 LEU CA C sing N N 252 LEU CA CB sing N N 253 LEU CA HA sing N N 254 LEU C O doub N N 255 LEU C OXT sing N N 256 LEU CB CG sing N N 257 LEU CB HB2 sing N N 258 LEU CB HB3 sing N N 259 LEU CG CD1 sing N N 260 LEU CG CD2 sing N N 261 LEU CG HG sing N N 262 LEU CD1 HD11 sing N N 263 LEU CD1 HD12 sing N N 264 LEU CD1 HD13 sing N N 265 LEU CD2 HD21 sing N N 266 LEU CD2 HD22 sing N N 267 LEU CD2 HD23 sing N N 268 LEU OXT HXT sing N N 269 LYS N CA sing N N 270 LYS N H sing N N 271 LYS N H2 sing N N 272 LYS CA C sing N N 273 LYS CA CB sing N N 274 LYS CA HA sing N N 275 LYS C O doub N N 276 LYS C OXT sing N N 277 LYS CB CG sing N N 278 LYS CB HB2 sing N N 279 LYS CB HB3 sing N N 280 LYS CG CD sing N N 281 LYS CG HG2 sing N N 282 LYS CG HG3 sing N N 283 LYS CD CE sing N N 284 LYS CD HD2 sing N N 285 LYS CD HD3 sing N N 286 LYS CE NZ sing N N 287 LYS CE HE2 sing N N 288 LYS CE HE3 sing N N 289 LYS NZ HZ1 sing N N 290 LYS NZ HZ2 sing N N 291 LYS NZ HZ3 sing N N 292 LYS OXT HXT sing N N 293 MET N CA sing N N 294 MET N H sing N N 295 MET N H2 sing N N 296 MET CA C sing N N 297 MET CA CB sing N N 298 MET CA HA sing N N 299 MET C O doub N N 300 MET C OXT sing N N 301 MET CB CG sing N N 302 MET CB HB2 sing N N 303 MET CB HB3 sing N N 304 MET CG SD sing N N 305 MET CG HG2 sing N N 306 MET CG HG3 sing N N 307 MET SD CE sing N N 308 MET CE HE1 sing N N 309 MET CE HE2 sing N N 310 MET CE HE3 sing N N 311 MET OXT HXT sing N N 312 PHE N CA sing N N 313 PHE N H sing N N 314 PHE N H2 sing N N 315 PHE CA C sing N N 316 PHE CA CB sing N N 317 PHE CA HA sing N N 318 PHE C O doub N N 319 PHE C OXT sing N N 320 PHE CB CG sing N N 321 PHE CB HB2 sing N N 322 PHE CB HB3 sing N N 323 PHE CG CD1 doub Y N 324 PHE CG CD2 sing Y N 325 PHE CD1 CE1 sing Y N 326 PHE CD1 HD1 sing N N 327 PHE CD2 CE2 doub Y N 328 PHE CD2 HD2 sing N N 329 PHE CE1 CZ doub Y N 330 PHE CE1 HE1 sing N N 331 PHE CE2 CZ sing Y N 332 PHE CE2 HE2 sing N N 333 PHE CZ HZ sing N N 334 PHE OXT HXT sing N N 335 PRO N CA sing N N 336 PRO N CD sing N N 337 PRO N H sing N N 338 PRO CA C sing N N 339 PRO CA CB sing N N 340 PRO CA HA sing N N 341 PRO C O doub N N 342 PRO C OXT sing N N 343 PRO CB CG sing N N 344 PRO CB HB2 sing N N 345 PRO CB HB3 sing N N 346 PRO CG CD sing N N 347 PRO CG HG2 sing N N 348 PRO CG HG3 sing N N 349 PRO CD HD2 sing N N 350 PRO CD HD3 sing N N 351 PRO OXT HXT sing N N 352 SER N CA sing N N 353 SER N H sing N N 354 SER N H2 sing N N 355 SER CA C sing N N 356 SER CA CB sing N N 357 SER CA HA sing N N 358 SER C O doub N N 359 SER C OXT sing N N 360 SER CB OG sing N N 361 SER CB HB2 sing N N 362 SER CB HB3 sing N N 363 SER OG HG sing N N 364 SER OXT HXT sing N N 365 SO4 S O1 doub N N 366 SO4 S O2 doub N N 367 SO4 S O3 sing N N 368 SO4 S O4 sing N N 369 THR N CA sing N N 370 THR N H sing N N 371 THR N H2 sing N N 372 THR CA C sing N N 373 THR CA CB sing N N 374 THR CA HA sing N N 375 THR C O doub N N 376 THR C OXT sing N N 377 THR CB OG1 sing N N 378 THR CB CG2 sing N N 379 THR CB HB sing N N 380 THR OG1 HG1 sing N N 381 THR CG2 HG21 sing N N 382 THR CG2 HG22 sing N N 383 THR CG2 HG23 sing N N 384 THR OXT HXT sing N N 385 TRP N CA sing N N 386 TRP N H sing N N 387 TRP N H2 sing N N 388 TRP CA C sing N N 389 TRP CA CB sing N N 390 TRP CA HA sing N N 391 TRP C O doub N N 392 TRP C OXT sing N N 393 TRP CB CG sing N N 394 TRP CB HB2 sing N N 395 TRP CB HB3 sing N N 396 TRP CG CD1 doub Y N 397 TRP CG CD2 sing Y N 398 TRP CD1 NE1 sing Y N 399 TRP CD1 HD1 sing N N 400 TRP CD2 CE2 doub Y N 401 TRP CD2 CE3 sing Y N 402 TRP NE1 CE2 sing Y N 403 TRP NE1 HE1 sing N N 404 TRP CE2 CZ2 sing Y N 405 TRP CE3 CZ3 doub Y N 406 TRP CE3 HE3 sing N N 407 TRP CZ2 CH2 doub Y N 408 TRP CZ2 HZ2 sing N N 409 TRP CZ3 CH2 sing Y N 410 TRP CZ3 HZ3 sing N N 411 TRP CH2 HH2 sing N N 412 TRP OXT HXT sing N N 413 TYR N CA sing N N 414 TYR N H sing N N 415 TYR N H2 sing N N 416 TYR CA C sing N N 417 TYR CA CB sing N N 418 TYR CA HA sing N N 419 TYR C O doub N N 420 TYR C OXT sing N N 421 TYR CB CG sing N N 422 TYR CB HB2 sing N N 423 TYR CB HB3 sing N N 424 TYR CG CD1 doub Y N 425 TYR CG CD2 sing Y N 426 TYR CD1 CE1 sing Y N 427 TYR CD1 HD1 sing N N 428 TYR CD2 CE2 doub Y N 429 TYR CD2 HD2 sing N N 430 TYR CE1 CZ doub Y N 431 TYR CE1 HE1 sing N N 432 TYR CE2 CZ sing Y N 433 TYR CE2 HE2 sing N N 434 TYR CZ OH sing N N 435 TYR OH HH sing N N 436 TYR OXT HXT sing N N 437 U OP3 P sing N N 438 U OP3 HOP3 sing N N 439 U P OP1 doub N N 440 U P OP2 sing N N 441 U P "O5'" sing N N 442 U OP2 HOP2 sing N N 443 U "O5'" "C5'" sing N N 444 U "C5'" "C4'" sing N N 445 U "C5'" "H5'" sing N N 446 U "C5'" "H5''" sing N N 447 U "C4'" "O4'" sing N N 448 U "C4'" "C3'" sing N N 449 U "C4'" "H4'" sing N N 450 U "O4'" "C1'" sing N N 451 U "C3'" "O3'" sing N N 452 U "C3'" "C2'" sing N N 453 U "C3'" "H3'" sing N N 454 U "O3'" "HO3'" sing N N 455 U "C2'" "O2'" sing N N 456 U "C2'" "C1'" sing N N 457 U "C2'" "H2'" sing N N 458 U "O2'" "HO2'" sing N N 459 U "C1'" N1 sing N N 460 U "C1'" "H1'" sing N N 461 U N1 C2 sing N N 462 U N1 C6 sing N N 463 U C2 O2 doub N N 464 U C2 N3 sing N N 465 U N3 C4 sing N N 466 U N3 H3 sing N N 467 U C4 O4 doub N N 468 U C4 C5 sing N N 469 U C5 C6 doub N N 470 U C5 H5 sing N N 471 U C6 H6 sing N N 472 VAL N CA sing N N 473 VAL N H sing N N 474 VAL N H2 sing N N 475 VAL CA C sing N N 476 VAL CA CB sing N N 477 VAL CA HA sing N N 478 VAL C O doub N N 479 VAL C OXT sing N N 480 VAL CB CG1 sing N N 481 VAL CB CG2 sing N N 482 VAL CB HB sing N N 483 VAL CG1 HG11 sing N N 484 VAL CG1 HG12 sing N N 485 VAL CG1 HG13 sing N N 486 VAL CG2 HG21 sing N N 487 VAL CG2 HG22 sing N N 488 VAL CG2 HG23 sing N N 489 VAL OXT HXT sing N N 490 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4JK0 'double helix' 4JK0 'a-form double helix' 4JK0 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B U 3 1_555 B U 21 4_555 -2.495 -1.581 -0.078 -6.312 -16.891 9.070 1 B_U503:U521_B B 503 ? B 521 ? 16 1 1 B G 4 1_555 B C 20 4_555 -0.003 0.093 -0.296 -12.262 -11.650 -0.726 2 B_G504:C520_B B 504 ? B 520 ? 19 1 1 B C 5 1_555 B G 19 4_555 0.087 -0.111 -0.028 -1.585 -11.828 3.499 3 B_C505:G519_B B 505 ? B 519 ? 19 1 1 B U 6 1_555 B U 18 4_555 -2.307 -1.778 0.170 -2.287 -14.788 8.012 4 B_U506:U518_B B 506 ? B 518 ? 16 1 1 B G 7 1_555 B C 17 4_555 -0.377 0.166 -0.011 -0.350 -15.755 11.827 5 B_G507:C517_B B 507 ? B 517 ? ? 1 1 B C 8 1_555 B G 16 4_555 0.467 0.179 -0.273 4.521 -11.455 8.468 6 B_C508:G516_B B 508 ? B 516 ? 19 1 1 B U 9 1_555 B U 15 4_555 1.085 -1.330 -0.015 -1.989 -15.943 -1.259 7 B_U509:U515_B B 509 ? B 515 ? ? ? 1 B G 10 1_555 B C 14 4_555 0.090 -0.191 0.060 -1.232 -11.036 -0.475 8 B_G510:C514_B B 510 ? B 514 ? 19 1 1 B C 11 1_555 B G 13 4_555 0.168 -0.163 -0.074 0.454 -3.120 -4.478 9 B_C511:G513_B B 511 ? B 513 ? 19 1 1 B G 13 1_555 B C 11 4_555 -0.168 -0.163 -0.074 -0.454 -3.120 -4.478 10 B_G513:C511_B B 513 ? B 511 ? 19 1 1 B C 14 1_555 B G 10 4_555 -0.090 -0.191 0.060 1.232 -11.036 -0.475 11 B_C514:G510_B B 514 ? B 510 ? 19 1 1 B U 15 1_555 B U 9 4_555 -1.085 -1.330 -0.015 1.989 -15.943 -1.259 12 B_U515:U509_B B 515 ? B 509 ? ? ? 1 B G 16 1_555 B C 8 4_555 -0.467 0.179 -0.273 -4.521 -11.455 8.468 13 B_G516:C508_B B 516 ? B 508 ? 19 1 1 B C 17 1_555 B G 7 4_555 0.377 0.166 -0.011 0.350 -15.755 11.827 14 B_C517:G507_B B 517 ? B 507 ? ? 1 1 B U 18 1_555 B U 6 4_555 2.307 -1.778 0.170 2.287 -14.788 8.012 15 B_U518:U506_B B 518 ? B 506 ? 16 1 1 B G 19 1_555 B C 5 4_555 -0.087 -0.111 -0.028 1.585 -11.829 3.499 16 B_G519:C505_B B 519 ? B 505 ? 19 1 1 B C 20 1_555 B G 4 4_555 0.003 0.093 -0.296 12.262 -11.651 -0.726 17 B_C520:G504_B B 520 ? B 504 ? 19 1 1 B U 21 1_555 B U 3 4_555 2.495 -1.581 -0.078 6.312 -16.891 9.070 18 B_U521:U503_B B 521 ? B 503 ? 16 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B U 3 1_555 B U 21 4_555 B G 4 1_555 B C 20 4_555 -0.623 -1.283 3.424 0.426 6.074 42.886 -2.343 0.887 3.216 8.257 -0.579 43.296 1 BB_U503G504:C520U521_BB B 503 ? B 521 ? B 504 ? B 520 ? 1 B G 4 1_555 B C 20 4_555 B C 5 1_555 B G 19 4_555 0.228 -1.753 3.058 0.558 1.841 24.201 -4.700 -0.380 2.923 4.382 -1.328 24.277 2 BB_G504C505:G519C520_BB B 504 ? B 520 ? B 505 ? B 519 ? 1 B C 5 1_555 B G 19 4_555 B U 6 1_555 B U 18 4_555 0.332 -1.849 3.196 -4.959 12.877 22.372 -6.933 -1.833 1.773 29.819 11.484 26.239 3 BB_C505U506:U518G519_BB B 505 ? B 519 ? B 506 ? B 518 ? 1 B U 6 1_555 B U 18 4_555 B G 7 1_555 B C 17 4_555 0.335 -1.109 3.167 0.073 11.805 41.192 -2.612 -0.453 2.763 16.377 -0.101 42.780 4 BB_U506G507:C517U518_BB B 506 ? B 518 ? B 507 ? B 517 ? 1 B G 7 1_555 B C 17 4_555 B C 8 1_555 B G 16 4_555 -0.398 -1.896 3.151 1.602 3.624 28.623 -4.545 1.127 2.868 7.286 -3.220 28.890 5 BB_G507C508:G516C517_BB B 507 ? B 517 ? B 508 ? B 516 ? 1 B C 8 1_555 B G 16 4_555 B U 9 1_555 B U 15 4_555 -0.425 -1.562 3.429 -0.396 13.086 34.645 -4.171 0.619 2.689 21.067 0.637 36.965 6 BB_C508U509:U515G516_BB B 508 ? B 516 ? B 509 ? B 515 ? 1 B U 9 1_555 B U 15 4_555 B G 10 1_555 B C 14 4_555 0.068 -1.239 3.130 1.380 12.063 28.049 -4.474 0.114 2.405 23.541 -2.693 30.515 7 BB_U509G510:C514U515_BB B 509 ? B 515 ? B 510 ? B 514 ? 1 B G 10 1_555 B C 14 4_555 B C 11 1_555 B G 13 4_555 -0.324 -1.702 3.354 0.614 7.600 31.018 -4.425 0.697 2.860 13.947 -1.126 31.919 8 BB_G510C511:G513C514_BB B 510 ? B 514 ? B 511 ? B 513 ? 1 B C 11 1_555 B G 13 4_555 B G 13 1_555 B C 11 4_555 0.000 -3.731 6.504 0.000 0.989 63.953 -3.607 0.000 6.451 0.934 0.000 63.960 9 BB_C511G513:C511G513_BB B 511 ? B 513 ? B 513 ? B 511 ? 1 B G 13 1_555 B C 11 4_555 B C 14 1_555 B G 10 4_555 0.324 -1.702 3.354 -0.614 7.600 31.018 -4.425 -0.697 2.860 13.947 1.126 31.919 10 BB_G513C514:G510C511_BB B 513 ? B 511 ? B 514 ? B 510 ? 1 B C 14 1_555 B G 10 4_555 B U 15 1_555 B U 9 4_555 -0.068 -1.239 3.130 -1.380 12.063 28.049 -4.474 -0.114 2.405 23.541 2.693 30.515 11 BB_C514U515:U509G510_BB B 514 ? B 510 ? B 515 ? B 509 ? 1 B U 15 1_555 B U 9 4_555 B G 16 1_555 B C 8 4_555 0.425 -1.562 3.429 0.396 13.086 34.645 -4.171 -0.619 2.689 21.067 -0.637 36.965 12 BB_U515G516:C508U509_BB B 515 ? B 509 ? B 516 ? B 508 ? 1 B G 16 1_555 B C 8 4_555 B C 17 1_555 B G 7 4_555 0.398 -1.896 3.151 -1.602 3.624 28.623 -4.545 -1.127 2.868 7.286 3.221 28.890 13 BB_G516C517:G507C508_BB B 516 ? B 508 ? B 517 ? B 507 ? 1 B C 17 1_555 B G 7 4_555 B U 18 1_555 B U 6 4_555 -0.335 -1.109 3.167 -0.073 11.805 41.192 -2.612 0.453 2.763 16.377 0.101 42.780 14 BB_C517U518:U506G507_BB B 517 ? B 507 ? B 518 ? B 506 ? 1 B U 18 1_555 B U 6 4_555 B G 19 1_555 B C 5 4_555 -0.332 -1.849 3.196 4.959 12.877 22.372 -6.933 1.833 1.773 29.819 -11.484 26.239 15 BB_U518G519:C505U506_BB B 518 ? B 506 ? B 519 ? B 505 ? 1 B G 19 1_555 B C 5 4_555 B C 20 1_555 B G 4 4_555 -0.228 -1.753 3.058 -0.558 1.841 24.201 -4.700 0.380 2.923 4.383 1.328 24.277 16 BB_G519C520:G504C505_BB B 519 ? B 505 ? B 520 ? B 504 ? 1 B C 20 1_555 B G 4 4_555 B U 21 1_555 B U 3 4_555 0.623 -1.283 3.424 -0.426 6.074 42.886 -2.343 -0.887 3.216 8.257 0.579 43.296 17 BB_C520U521:U503G504_BB B 520 ? B 504 ? B 521 ? B 503 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SULFATE ION' SO4 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1R9F _pdbx_initial_refinement_model.details 'PDB ENTRY 1R9F' #