data_4JK3 # _entry.id 4JK3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4JK3 RCSB RCSB078145 WWPDB D_1000078145 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4J43 'PylD holoenzyme (native dataset, 2.2 A resolution)' unspecified PDB 4J49 . unspecified PDB 4J4B . unspecified PDB 4J4H . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4JK3 _pdbx_database_status.recvd_initial_deposition_date 2013-03-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Quitterer, F.' 1 'Beck, P.' 2 'Bacher, A.' 3 'Groll, M.' 4 # _citation.id primary _citation.title 'Structure and Reaction Mechanism of Pyrrolysine Synthase (PylD).' _citation.journal_abbrev Angew.Chem.Int.Ed.Engl. _citation.journal_volume 52 _citation.page_first 7033 _citation.page_last 7037 _citation.year 2013 _citation.journal_id_ASTM ? _citation.country GE _citation.journal_id_ISSN 1433-7851 _citation.journal_id_CSD 9999 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23720358 _citation.pdbx_database_id_DOI 10.1002/anie.201301164 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Quitterer, F.' 1 primary 'Beck, P.' 2 primary 'Bacher, A.' 3 primary 'Groll, M.' 4 # _cell.entry_id 4JK3 _cell.length_a 79.650 _cell.length_b 155.400 _cell.length_c 39.570 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4JK3 _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man PylD 28158.113 2 1.4.1.- ? ? ? 2 non-polymer syn NICOTINAMIDE-ADENINE-DINUCLEOTIDE 663.425 2 1.4.1.- ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 5 water nat water 18.015 49 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)ALLTPDDLININ(MSE)QLQKADSAVQEVTGLDIKGICKALYGTFSSSEKVGIVPVTSGNGIIGNFSASLHAITQ YFGFDSFVTD(MSE)PDVSGYYEAVQNGAEIIL(MSE)ADDRTFLAHNLKNGK(MSE)ANNQPCTGIIYAEIASRYLKAD SKDVLVVGLGKVGFPGAEHLVQKDFRVYGYDADETLLERATSNLGIIPFDPANPKKFSIIFEATPCANTIPEAVLSENCV LSTPGIPCAISEELRDKYEVQLIAEPLGIGTAS(MSE)LYSVL ; _entity_poly.pdbx_seq_one_letter_code_can ;MALLTPDDLININMQLQKADSAVQEVTGLDIKGICKALYGTFSSSEKVGIVPVTSGNGIIGNFSASLHAITQYFGFDSFV TDMPDVSGYYEAVQNGAEIILMADDRTFLAHNLKNGKMANNQPCTGIIYAEIASRYLKADSKDVLVVGLGKVGFPGAEHL VQKDFRVYGYDADETLLERATSNLGIIPFDPANPKKFSIIFEATPCANTIPEAVLSENCVLSTPGIPCAISEELRDKYEV QLIAEPLGIGTASMLYSVL ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 ALA n 1 3 LEU n 1 4 LEU n 1 5 THR n 1 6 PRO n 1 7 ASP n 1 8 ASP n 1 9 LEU n 1 10 ILE n 1 11 ASN n 1 12 ILE n 1 13 ASN n 1 14 MSE n 1 15 GLN n 1 16 LEU n 1 17 GLN n 1 18 LYS n 1 19 ALA n 1 20 ASP n 1 21 SER n 1 22 ALA n 1 23 VAL n 1 24 GLN n 1 25 GLU n 1 26 VAL n 1 27 THR n 1 28 GLY n 1 29 LEU n 1 30 ASP n 1 31 ILE n 1 32 LYS n 1 33 GLY n 1 34 ILE n 1 35 CYS n 1 36 LYS n 1 37 ALA n 1 38 LEU n 1 39 TYR n 1 40 GLY n 1 41 THR n 1 42 PHE n 1 43 SER n 1 44 SER n 1 45 SER n 1 46 GLU n 1 47 LYS n 1 48 VAL n 1 49 GLY n 1 50 ILE n 1 51 VAL n 1 52 PRO n 1 53 VAL n 1 54 THR n 1 55 SER n 1 56 GLY n 1 57 ASN n 1 58 GLY n 1 59 ILE n 1 60 ILE n 1 61 GLY n 1 62 ASN n 1 63 PHE n 1 64 SER n 1 65 ALA n 1 66 SER n 1 67 LEU n 1 68 HIS n 1 69 ALA n 1 70 ILE n 1 71 THR n 1 72 GLN n 1 73 TYR n 1 74 PHE n 1 75 GLY n 1 76 PHE n 1 77 ASP n 1 78 SER n 1 79 PHE n 1 80 VAL n 1 81 THR n 1 82 ASP n 1 83 MSE n 1 84 PRO n 1 85 ASP n 1 86 VAL n 1 87 SER n 1 88 GLY n 1 89 TYR n 1 90 TYR n 1 91 GLU n 1 92 ALA n 1 93 VAL n 1 94 GLN n 1 95 ASN n 1 96 GLY n 1 97 ALA n 1 98 GLU n 1 99 ILE n 1 100 ILE n 1 101 LEU n 1 102 MSE n 1 103 ALA n 1 104 ASP n 1 105 ASP n 1 106 ARG n 1 107 THR n 1 108 PHE n 1 109 LEU n 1 110 ALA n 1 111 HIS n 1 112 ASN n 1 113 LEU n 1 114 LYS n 1 115 ASN n 1 116 GLY n 1 117 LYS n 1 118 MSE n 1 119 ALA n 1 120 ASN n 1 121 ASN n 1 122 GLN n 1 123 PRO n 1 124 CYS n 1 125 THR n 1 126 GLY n 1 127 ILE n 1 128 ILE n 1 129 TYR n 1 130 ALA n 1 131 GLU n 1 132 ILE n 1 133 ALA n 1 134 SER n 1 135 ARG n 1 136 TYR n 1 137 LEU n 1 138 LYS n 1 139 ALA n 1 140 ASP n 1 141 SER n 1 142 LYS n 1 143 ASP n 1 144 VAL n 1 145 LEU n 1 146 VAL n 1 147 VAL n 1 148 GLY n 1 149 LEU n 1 150 GLY n 1 151 LYS n 1 152 VAL n 1 153 GLY n 1 154 PHE n 1 155 PRO n 1 156 GLY n 1 157 ALA n 1 158 GLU n 1 159 HIS n 1 160 LEU n 1 161 VAL n 1 162 GLN n 1 163 LYS n 1 164 ASP n 1 165 PHE n 1 166 ARG n 1 167 VAL n 1 168 TYR n 1 169 GLY n 1 170 TYR n 1 171 ASP n 1 172 ALA n 1 173 ASP n 1 174 GLU n 1 175 THR n 1 176 LEU n 1 177 LEU n 1 178 GLU n 1 179 ARG n 1 180 ALA n 1 181 THR n 1 182 SER n 1 183 ASN n 1 184 LEU n 1 185 GLY n 1 186 ILE n 1 187 ILE n 1 188 PRO n 1 189 PHE n 1 190 ASP n 1 191 PRO n 1 192 ALA n 1 193 ASN n 1 194 PRO n 1 195 LYS n 1 196 LYS n 1 197 PHE n 1 198 SER n 1 199 ILE n 1 200 ILE n 1 201 PHE n 1 202 GLU n 1 203 ALA n 1 204 THR n 1 205 PRO n 1 206 CYS n 1 207 ALA n 1 208 ASN n 1 209 THR n 1 210 ILE n 1 211 PRO n 1 212 GLU n 1 213 ALA n 1 214 VAL n 1 215 LEU n 1 216 SER n 1 217 GLU n 1 218 ASN n 1 219 CYS n 1 220 VAL n 1 221 LEU n 1 222 SER n 1 223 THR n 1 224 PRO n 1 225 GLY n 1 226 ILE n 1 227 PRO n 1 228 CYS n 1 229 ALA n 1 230 ILE n 1 231 SER n 1 232 GLU n 1 233 GLU n 1 234 LEU n 1 235 ARG n 1 236 ASP n 1 237 LYS n 1 238 TYR n 1 239 GLU n 1 240 VAL n 1 241 GLN n 1 242 LEU n 1 243 ILE n 1 244 ALA n 1 245 GLU n 1 246 PRO n 1 247 LEU n 1 248 GLY n 1 249 ILE n 1 250 GLY n 1 251 THR n 1 252 ALA n 1 253 SER n 1 254 MSE n 1 255 LEU n 1 256 TYR n 1 257 SER n 1 258 VAL n 1 259 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Mbar_A0835 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain Fusaro _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Methanosarcina barkeri' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 269797 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q46E80_METBF _struct_ref.pdbx_db_accession Q46E80 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MALLTPDDLININMQLQKADSAVQEVTGLDIKGICKALYGTFSSSEKVGIVPVTSGNGIIGNFSASLHAITQYFGFDSFV TDMPDVSGYYEAVQNGAEIILMADDRTFLAHNLKNGKMANNQPCTGIIYAEIASRYLKADSKDVLVVGLGKVGFPGAEHL VQKDFRVYGYDADETLLERATSNLGIIPFDPANPKKFSIIFEATPCANTIPEAVLSENCVLSTPGIPCAISEELRDKYEV QLIAEPLGIGTASMLYSVL ; _struct_ref.pdbx_align_begin 5 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4JK3 A 1 ? 259 ? Q46E80 5 ? 263 ? 1 259 2 1 4JK3 B 1 ? 259 ? Q46E80 5 ? 263 ? 1 259 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NAD non-polymer . NICOTINAMIDE-ADENINE-DINUCLEOTIDE ? 'C21 H27 N7 O14 P2' 663.425 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4JK3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.17 _exptl_crystal.density_percent_sol 43.43 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '0.1 M TRIS; 27% PEG3350; 0.2 M NaCl, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.pdbx_collection_date 2012-06-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'LN2 cooled fixed-exit. Si(111) monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9798 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X06SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X06SA _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9798 # _reflns.entry_id 4JK3 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 30 _reflns.d_resolution_high 2.5 _reflns.number_obs ? _reflns.number_all ? _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs 0.11 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.8 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.5 _reflns_shell.d_res_low 2.6 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.693 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.0 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4JK3 _refine.ls_number_reflns_obs 16865 _refine.ls_number_reflns_all 16865 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 15.00 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 99.98 _refine.ls_R_factor_obs 0.21760 _refine.ls_R_factor_all 0.221 _refine.ls_R_factor_R_work 0.21559 _refine.ls_R_factor_R_free 0.25659 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 887 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.938 _refine.correlation_coeff_Fo_to_Fc_free 0.915 _refine.B_iso_mean 54.408 _refine.aniso_B[1][1] 2.91 _refine.aniso_B[2][2] -5.59 _refine.aniso_B[3][3] 2.69 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 1.033 _refine.pdbx_overall_ESU_R_Free 0.315 _refine.overall_SU_ML 0.226 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 21.626 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3798 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 92 _refine_hist.number_atoms_solvent 49 _refine_hist.number_atoms_total 3939 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 15.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.007 0.019 ? 3964 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.361 2.014 ? 5402 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 5.374 5.000 ? 498 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 35.585 25.696 ? 158 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 17.317 15.000 ? 608 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 13.565 15.000 ? 10 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.089 0.200 ? 630 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.005 0.021 ? 2950 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.500 _refine_ls_shell.d_res_low 2.563 _refine_ls_shell.number_reflns_R_work 1179 _refine_ls_shell.R_factor_R_work 0.258 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.273 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 62 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.details _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.vector[2] _struct_ncs_oper.vector[3] 1 given ? 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 2 given ? -0.306636 0.951004 -0.039582 0.950911 0.307899 0.031084 0.041749 -0.028108 -0.998733 103.15859 -74.22720 -57.93433 # _struct.entry_id 4JK3 _struct.title 'PylD holoenzyme (SeMet)' _struct.pdbx_descriptor 'PylD (E.C.1.4.1.-)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4JK3 _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'Pyrrolysine, 22nd Amino Acid, Biosynthesis, Rossmann Fold, Dehydrogenase, NAD, oxidoreductase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 2 ? G N N 3 ? H N N 4 ? I N N 5 ? J N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 5 ? GLY A 28 ? THR A 5 GLY A 28 1 ? 24 HELX_P HELX_P2 2 ASP A 30 ? GLY A 40 ? ASP A 30 GLY A 40 1 ? 11 HELX_P HELX_P3 3 GLY A 61 ? PHE A 74 ? GLY A 61 PHE A 74 1 ? 14 HELX_P HELX_P4 4 PRO A 84 ? ASN A 95 ? PRO A 84 ASN A 95 1 ? 12 HELX_P HELX_P5 5 ASN A 121 ? ARG A 135 ? ASN A 121 ARG A 135 1 ? 15 HELX_P HELX_P6 6 VAL A 152 ? LYS A 163 ? VAL A 152 LYS A 163 1 ? 12 HELX_P HELX_P7 7 ASP A 173 ? GLY A 185 ? ASP A 173 GLY A 185 1 ? 13 HELX_P HELX_P8 8 PRO A 211 ? ALA A 213 ? PRO A 211 ALA A 213 5 ? 3 HELX_P HELX_P9 9 SER A 231 ? TYR A 238 ? SER A 231 TYR A 238 1 ? 8 HELX_P HELX_P10 10 LEU A 247 ? LEU A 259 ? LEU A 247 LEU A 259 1 ? 13 HELX_P HELX_P11 11 PRO B 6 ? GLY B 28 ? PRO B 6 GLY B 28 1 ? 23 HELX_P HELX_P12 12 ASP B 30 ? GLY B 40 ? ASP B 30 GLY B 40 1 ? 11 HELX_P HELX_P13 13 GLY B 61 ? PHE B 74 ? GLY B 61 PHE B 74 1 ? 14 HELX_P HELX_P14 14 PRO B 84 ? ASN B 95 ? PRO B 84 ASN B 95 1 ? 12 HELX_P HELX_P15 15 ASN B 121 ? ARG B 135 ? ASN B 121 ARG B 135 1 ? 15 HELX_P HELX_P16 16 VAL B 152 ? LYS B 163 ? VAL B 152 LYS B 163 1 ? 12 HELX_P HELX_P17 17 ASP B 173 ? GLY B 185 ? ASP B 173 GLY B 185 1 ? 13 HELX_P HELX_P18 18 PRO B 211 ? ALA B 213 ? PRO B 211 ALA B 213 5 ? 3 HELX_P HELX_P19 19 SER B 231 ? GLU B 239 ? SER B 231 GLU B 239 1 ? 9 HELX_P HELX_P20 20 LEU B 247 ? LEU B 259 ? LEU B 247 LEU B 259 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ASN 13 C ? ? ? 1_555 A MSE 14 N ? ? A ASN 13 A MSE 14 1_555 ? ? ? ? ? ? ? 1.333 ? covale2 covale ? ? A MSE 14 C ? ? ? 1_555 A GLN 15 N ? ? A MSE 14 A GLN 15 1_555 ? ? ? ? ? ? ? 1.333 ? covale3 covale ? ? A ASP 82 C ? ? ? 1_555 A MSE 83 N ? ? A ASP 82 A MSE 83 1_555 ? ? ? ? ? ? ? 1.329 ? covale4 covale ? ? A MSE 83 C ? ? ? 1_555 A PRO 84 N ? ? A MSE 83 A PRO 84 1_555 ? ? ? ? ? ? ? 1.345 ? covale5 covale ? ? A LEU 101 C ? ? ? 1_555 A MSE 102 N ? ? A LEU 101 A MSE 102 1_555 ? ? ? ? ? ? ? 1.333 ? covale6 covale ? ? A MSE 102 C ? ? ? 1_555 A ALA 103 N ? ? A MSE 102 A ALA 103 1_555 ? ? ? ? ? ? ? 1.330 ? covale7 covale ? ? A LYS 117 C ? ? ? 1_555 A MSE 118 N ? ? A LYS 117 A MSE 118 1_555 ? ? ? ? ? ? ? 1.325 ? covale8 covale ? ? A MSE 118 C ? ? ? 1_555 A ALA 119 N ? ? A MSE 118 A ALA 119 1_555 ? ? ? ? ? ? ? 1.322 ? covale9 covale ? ? A SER 253 C ? ? ? 1_555 A MSE 254 N ? ? A SER 253 A MSE 254 1_555 ? ? ? ? ? ? ? 1.331 ? covale10 covale ? ? A MSE 254 C ? ? ? 1_555 A LEU 255 N ? ? A MSE 254 A LEU 255 1_555 ? ? ? ? ? ? ? 1.335 ? covale11 covale ? ? B ASN 13 C ? ? ? 1_555 B MSE 14 N ? ? B ASN 13 B MSE 14 1_555 ? ? ? ? ? ? ? 1.331 ? covale12 covale ? ? B MSE 14 C ? ? ? 1_555 B GLN 15 N ? ? B MSE 14 B GLN 15 1_555 ? ? ? ? ? ? ? 1.332 ? covale13 covale ? ? B ASP 82 C ? ? ? 1_555 B MSE 83 N ? ? B ASP 82 B MSE 83 1_555 ? ? ? ? ? ? ? 1.328 ? covale14 covale ? ? B MSE 83 C ? ? ? 1_555 B PRO 84 N ? ? B MSE 83 B PRO 84 1_555 ? ? ? ? ? ? ? 1.349 ? covale15 covale ? ? B LEU 101 C ? ? ? 1_555 B MSE 102 N ? ? B LEU 101 B MSE 102 1_555 ? ? ? ? ? ? ? 1.334 ? covale16 covale ? ? B MSE 102 C ? ? ? 1_555 B ALA 103 N ? ? B MSE 102 B ALA 103 1_555 ? ? ? ? ? ? ? 1.330 ? covale17 covale ? ? B LYS 117 C ? ? ? 1_555 B MSE 118 N ? ? B LYS 117 B MSE 118 1_555 ? ? ? ? ? ? ? 1.330 ? covale18 covale ? ? B MSE 118 C ? ? ? 1_555 B ALA 119 N ? ? B MSE 118 B ALA 119 1_555 ? ? ? ? ? ? ? 1.327 ? covale19 covale ? ? B SER 253 C ? ? ? 1_555 B MSE 254 N ? ? B SER 253 B MSE 254 1_555 ? ? ? ? ? ? ? 1.336 ? covale20 covale ? ? B MSE 254 C ? ? ? 1_555 B LEU 255 N ? ? B MSE 254 B LEU 255 1_555 ? ? ? ? ? ? ? 1.336 ? metalc1 metalc ? ? D NA . NA ? ? ? 1_555 I HOH . O ? ? A NA 902 A HOH 1019 1_555 ? ? ? ? ? ? ? 2.542 ? metalc2 metalc ? ? B CYS 206 O ? ? ? 1_555 G NA . NA ? ? B CYS 206 B NA 902 1_555 ? ? ? ? ? ? ? 2.557 ? metalc3 metalc ? ? A THR 204 O ? ? ? 1_555 D NA . NA ? ? A THR 204 A NA 902 1_555 ? ? ? ? ? ? ? 2.578 ? metalc4 metalc ? ? G NA . NA ? ? ? 1_555 J HOH . O ? ? B NA 902 B HOH 1019 1_555 ? ? ? ? ? ? ? 2.580 ? metalc5 metalc ? ? B THR 204 O ? ? ? 1_555 G NA . NA ? ? B THR 204 B NA 902 1_555 ? ? ? ? ? ? ? 2.612 ? metalc6 metalc ? ? A PRO 227 O ? ? ? 1_555 D NA . NA ? ? A PRO 227 A NA 902 1_555 ? ? ? ? ? ? ? 2.645 ? metalc7 metalc ? ? F NAD . O7N ? ? ? 1_555 H MG . MG ? ? B NAD 901 B MG 903 1_555 ? ? ? ? ? ? ? 2.656 ? metalc8 metalc ? ? A CYS 206 O ? ? ? 1_555 D NA . NA ? ? A CYS 206 A NA 902 1_555 ? ? ? ? ? ? ? 2.667 ? metalc9 metalc ? ? C NAD . O7N ? ? ? 1_555 E MG . MG ? ? A NAD 901 A MG 903 1_555 ? ? ? ? ? ? ? 2.699 ? metalc10 metalc ? ? A GLU 245 OE2 ? ? ? 1_555 E MG . MG ? ? A GLU 245 A MG 903 1_555 ? ? ? ? ? ? ? 2.706 ? metalc11 metalc ? ? B PRO 227 O ? ? ? 1_555 G NA . NA ? ? B PRO 227 B NA 902 1_555 ? ? ? ? ? ? ? 2.764 ? metalc12 metalc ? ? B GLU 202 OE1 ? ? ? 1_555 G NA . NA ? ? B GLU 202 B NA 902 1_555 ? ? ? ? ? ? ? 2.833 ? metalc13 metalc ? ? B GLU 245 OE2 ? ? ? 1_555 H MG . MG ? ? B GLU 245 B MG 903 1_555 ? ? ? ? ? ? ? 2.852 ? metalc14 metalc ? ? A TYR 129 OH ? ? ? 1_555 E MG . MG ? ? A TYR 129 A MG 903 1_555 ? ? ? ? ? ? ? 2.888 ? metalc15 metalc ? ? B GLU 202 OE2 ? ? ? 1_555 G NA . NA ? ? B GLU 202 B NA 902 1_555 ? ? ? ? ? ? ? 2.899 ? metalc16 metalc ? ? A GLU 202 OE2 ? ? ? 1_555 D NA . NA ? ? A GLU 202 A NA 902 1_555 ? ? ? ? ? ? ? 2.974 ? metalc17 metalc ? ? A GLU 202 OE1 ? ? ? 1_555 D NA . NA ? ? A GLU 202 A NA 902 1_555 ? ? ? ? ? ? ? 2.981 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ILE 226 A . ? ILE 226 A PRO 227 A ? PRO 227 A 1 -0.06 2 ILE 226 B . ? ILE 226 B PRO 227 B ? PRO 227 B 1 0.71 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 6 ? C ? 5 ? D ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel C 1 2 ? parallel C 2 3 ? parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel D 1 2 ? parallel D 2 3 ? parallel D 3 4 ? parallel D 4 5 ? parallel D 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 77 ? VAL A 80 ? ASP A 77 VAL A 80 A 2 LYS A 47 ? ILE A 50 ? LYS A 47 ILE A 50 A 3 ILE A 99 ? ALA A 103 ? ILE A 99 ALA A 103 A 4 PHE A 108 ? ASN A 112 ? PHE A 108 ASN A 112 A 5 MSE A 118 ? ASN A 120 ? MSE A 118 ASN A 120 B 1 ILE A 187 ? PRO A 188 ? ILE A 187 PRO A 188 B 2 ARG A 166 ? TYR A 170 ? ARG A 166 TYR A 170 B 3 ASP A 143 ? VAL A 147 ? ASP A 143 VAL A 147 B 4 PHE A 197 ? GLU A 202 ? PHE A 197 GLU A 202 B 5 LEU A 215 ? SER A 222 ? LEU A 215 SER A 222 B 6 GLN A 241 ? ILE A 243 ? GLN A 241 ILE A 243 C 1 ASP B 77 ? VAL B 80 ? ASP B 77 VAL B 80 C 2 LYS B 47 ? ILE B 50 ? LYS B 47 ILE B 50 C 3 ILE B 99 ? ALA B 103 ? ILE B 99 ALA B 103 C 4 PHE B 108 ? ASN B 112 ? PHE B 108 ASN B 112 C 5 MSE B 118 ? ASN B 120 ? MSE B 118 ASN B 120 D 1 ILE B 187 ? PRO B 188 ? ILE B 187 PRO B 188 D 2 ARG B 166 ? TYR B 170 ? ARG B 166 TYR B 170 D 3 ASP B 143 ? VAL B 147 ? ASP B 143 VAL B 147 D 4 PHE B 197 ? GLU B 202 ? PHE B 197 GLU B 202 D 5 LEU B 215 ? SER B 222 ? LEU B 215 SER B 222 D 6 GLN B 241 ? ILE B 243 ? GLN B 241 ILE B 243 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 79 ? O PHE A 79 N ILE A 50 ? N ILE A 50 A 2 3 N GLY A 49 ? N GLY A 49 O ILE A 99 ? O ILE A 99 A 3 4 N ILE A 100 ? N ILE A 100 O HIS A 111 ? O HIS A 111 A 4 5 N ALA A 110 ? N ALA A 110 O ALA A 119 ? O ALA A 119 B 1 2 O ILE A 187 ? O ILE A 187 N VAL A 167 ? N VAL A 167 B 2 3 O TYR A 168 ? O TYR A 168 N VAL A 144 ? N VAL A 144 B 3 4 N LEU A 145 ? N LEU A 145 O PHE A 201 ? O PHE A 201 B 4 5 N ILE A 200 ? N ILE A 200 O SER A 222 ? O SER A 222 B 5 6 N LEU A 221 ? N LEU A 221 O ILE A 243 ? O ILE A 243 C 1 2 O PHE B 79 ? O PHE B 79 N ILE B 50 ? N ILE B 50 C 2 3 N GLY B 49 ? N GLY B 49 O ILE B 99 ? O ILE B 99 C 3 4 N ILE B 100 ? N ILE B 100 O HIS B 111 ? O HIS B 111 C 4 5 N ALA B 110 ? N ALA B 110 O ALA B 119 ? O ALA B 119 D 1 2 O ILE B 187 ? O ILE B 187 N VAL B 167 ? N VAL B 167 D 2 3 O TYR B 168 ? O TYR B 168 N VAL B 144 ? N VAL B 144 D 3 4 N LEU B 145 ? N LEU B 145 O PHE B 201 ? O PHE B 201 D 4 5 N ILE B 200 ? N ILE B 200 O SER B 222 ? O SER B 222 D 5 6 N LEU B 221 ? N LEU B 221 O ILE B 243 ? O ILE B 243 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 23 'BINDING SITE FOR RESIDUE NAD A 901' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NA A 902' AC3 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE MG A 903' AC4 Software ? ? ? ? 21 'BINDING SITE FOR RESIDUE NAD B 901' AC5 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE NA B 902' AC6 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE MG B 903' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 23 ASN A 121 ? ASN A 121 . ? 1_555 ? 2 AC1 23 THR A 125 ? THR A 125 . ? 1_555 ? 3 AC1 23 VAL A 147 ? VAL A 147 . ? 1_555 ? 4 AC1 23 GLY A 150 ? GLY A 150 . ? 1_555 ? 5 AC1 23 LYS A 151 ? LYS A 151 . ? 1_555 ? 6 AC1 23 VAL A 152 ? VAL A 152 . ? 1_555 ? 7 AC1 23 ASP A 171 ? ASP A 171 . ? 1_555 ? 8 AC1 23 ALA A 172 ? ALA A 172 . ? 1_555 ? 9 AC1 23 LEU A 176 ? LEU A 176 . ? 1_555 ? 10 AC1 23 ALA A 203 ? ALA A 203 . ? 1_555 ? 11 AC1 23 THR A 204 ? THR A 204 . ? 1_555 ? 12 AC1 23 PRO A 205 ? PRO A 205 . ? 1_555 ? 13 AC1 23 CYS A 206 ? CYS A 206 . ? 1_555 ? 14 AC1 23 THR A 209 ? THR A 209 . ? 1_555 ? 15 AC1 23 PRO A 224 ? PRO A 224 . ? 1_555 ? 16 AC1 23 ILE A 226 ? ILE A 226 . ? 1_555 ? 17 AC1 23 GLU A 245 ? GLU A 245 . ? 1_555 ? 18 AC1 23 PRO A 246 ? PRO A 246 . ? 1_555 ? 19 AC1 23 LEU A 247 ? LEU A 247 . ? 1_555 ? 20 AC1 23 MG E . ? MG A 903 . ? 1_555 ? 21 AC1 23 HOH I . ? HOH A 1002 . ? 1_555 ? 22 AC1 23 HOH I . ? HOH A 1011 . ? 1_555 ? 23 AC1 23 HOH I . ? HOH A 1025 . ? 1_555 ? 24 AC2 6 GLU A 202 ? GLU A 202 . ? 1_555 ? 25 AC2 6 THR A 204 ? THR A 204 . ? 1_555 ? 26 AC2 6 CYS A 206 ? CYS A 206 . ? 1_555 ? 27 AC2 6 GLY A 225 ? GLY A 225 . ? 1_555 ? 28 AC2 6 PRO A 227 ? PRO A 227 . ? 1_555 ? 29 AC2 6 HOH I . ? HOH A 1019 . ? 1_555 ? 30 AC3 6 TYR A 129 ? TYR A 129 . ? 1_555 ? 31 AC3 6 GLU A 245 ? GLU A 245 . ? 1_555 ? 32 AC3 6 LEU A 247 ? LEU A 247 . ? 1_555 ? 33 AC3 6 ILE A 249 ? ILE A 249 . ? 1_555 ? 34 AC3 6 GLY A 250 ? GLY A 250 . ? 1_555 ? 35 AC3 6 NAD C . ? NAD A 901 . ? 1_555 ? 36 AC4 21 ASN B 121 ? ASN B 121 . ? 1_555 ? 37 AC4 21 THR B 125 ? THR B 125 . ? 1_555 ? 38 AC4 21 VAL B 147 ? VAL B 147 . ? 1_555 ? 39 AC4 21 GLY B 150 ? GLY B 150 . ? 1_555 ? 40 AC4 21 LYS B 151 ? LYS B 151 . ? 1_555 ? 41 AC4 21 VAL B 152 ? VAL B 152 . ? 1_555 ? 42 AC4 21 TYR B 170 ? TYR B 170 . ? 1_555 ? 43 AC4 21 ASP B 171 ? ASP B 171 . ? 1_555 ? 44 AC4 21 ALA B 172 ? ALA B 172 . ? 1_555 ? 45 AC4 21 LEU B 176 ? LEU B 176 . ? 1_555 ? 46 AC4 21 ALA B 203 ? ALA B 203 . ? 1_555 ? 47 AC4 21 THR B 204 ? THR B 204 . ? 1_555 ? 48 AC4 21 PRO B 205 ? PRO B 205 . ? 1_555 ? 49 AC4 21 CYS B 206 ? CYS B 206 . ? 1_555 ? 50 AC4 21 PRO B 224 ? PRO B 224 . ? 1_555 ? 51 AC4 21 ILE B 226 ? ILE B 226 . ? 1_555 ? 52 AC4 21 GLU B 245 ? GLU B 245 . ? 1_555 ? 53 AC4 21 PRO B 246 ? PRO B 246 . ? 1_555 ? 54 AC4 21 LEU B 247 ? LEU B 247 . ? 1_555 ? 55 AC4 21 MG H . ? MG B 903 . ? 1_555 ? 56 AC4 21 HOH J . ? HOH B 1001 . ? 1_555 ? 57 AC5 5 GLU B 202 ? GLU B 202 . ? 1_555 ? 58 AC5 5 THR B 204 ? THR B 204 . ? 1_555 ? 59 AC5 5 CYS B 206 ? CYS B 206 . ? 1_555 ? 60 AC5 5 PRO B 227 ? PRO B 227 . ? 1_555 ? 61 AC5 5 HOH J . ? HOH B 1019 . ? 1_555 ? 62 AC6 6 TYR B 129 ? TYR B 129 . ? 1_555 ? 63 AC6 6 GLU B 245 ? GLU B 245 . ? 1_555 ? 64 AC6 6 LEU B 247 ? LEU B 247 . ? 1_555 ? 65 AC6 6 ILE B 249 ? ILE B 249 . ? 1_555 ? 66 AC6 6 GLY B 250 ? GLY B 250 . ? 1_555 ? 67 AC6 6 NAD F . ? NAD B 901 . ? 1_555 ? # _database_PDB_matrix.entry_id 4JK3 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4JK3 _atom_sites.fract_transf_matrix[1][1] 0.012555 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006435 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025272 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N NA O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 LEU 3 3 ? ? ? A . n A 1 4 LEU 4 4 ? ? ? A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 PRO 6 6 6 PRO PRO A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 ASP 8 8 8 ASP ASP A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 ASN 11 11 11 ASN ASN A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 ASN 13 13 13 ASN ASN A . n A 1 14 MSE 14 14 14 MSE MSE A . n A 1 15 GLN 15 15 15 GLN GLN A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 GLN 17 17 17 GLN GLN A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 GLN 24 24 24 GLN GLN A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 CYS 35 35 35 CYS CYS A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 TYR 39 39 39 TYR TYR A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 THR 41 41 41 THR THR A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 VAL 51 51 51 VAL VAL A . n A 1 52 PRO 52 52 52 PRO PRO A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 THR 54 54 54 THR THR A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 GLY 56 56 ? ? ? A . n A 1 57 ASN 57 57 ? ? ? A . n A 1 58 GLY 58 58 ? ? ? A . n A 1 59 ILE 59 59 ? ? ? A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 SER 64 64 64 SER SER A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 HIS 68 68 68 HIS HIS A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 ILE 70 70 70 ILE ILE A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 GLN 72 72 72 GLN GLN A . n A 1 73 TYR 73 73 73 TYR TYR A . n A 1 74 PHE 74 74 74 PHE PHE A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 ASP 77 77 77 ASP ASP A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 PHE 79 79 79 PHE PHE A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 THR 81 81 81 THR THR A . n A 1 82 ASP 82 82 82 ASP ASP A . n A 1 83 MSE 83 83 83 MSE MSE A . n A 1 84 PRO 84 84 84 PRO PRO A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 SER 87 87 87 SER SER A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 TYR 89 89 89 TYR TYR A . n A 1 90 TYR 90 90 90 TYR TYR A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 GLN 94 94 94 GLN GLN A . n A 1 95 ASN 95 95 95 ASN ASN A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 GLU 98 98 98 GLU GLU A . n A 1 99 ILE 99 99 99 ILE ILE A . n A 1 100 ILE 100 100 100 ILE ILE A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 MSE 102 102 102 MSE MSE A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 ASP 105 105 105 ASP ASP A . n A 1 106 ARG 106 106 106 ARG ARG A . n A 1 107 THR 107 107 107 THR THR A . n A 1 108 PHE 108 108 108 PHE PHE A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 HIS 111 111 111 HIS HIS A . n A 1 112 ASN 112 112 112 ASN ASN A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 LYS 114 114 114 LYS LYS A . n A 1 115 ASN 115 115 115 ASN ASN A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 LYS 117 117 117 LYS LYS A . n A 1 118 MSE 118 118 118 MSE MSE A . n A 1 119 ALA 119 119 119 ALA ALA A . n A 1 120 ASN 120 120 120 ASN ASN A . n A 1 121 ASN 121 121 121 ASN ASN A . n A 1 122 GLN 122 122 122 GLN GLN A . n A 1 123 PRO 123 123 123 PRO PRO A . n A 1 124 CYS 124 124 124 CYS CYS A . n A 1 125 THR 125 125 125 THR THR A . n A 1 126 GLY 126 126 126 GLY GLY A . n A 1 127 ILE 127 127 127 ILE ILE A . n A 1 128 ILE 128 128 128 ILE ILE A . n A 1 129 TYR 129 129 129 TYR TYR A . n A 1 130 ALA 130 130 130 ALA ALA A . n A 1 131 GLU 131 131 131 GLU GLU A . n A 1 132 ILE 132 132 132 ILE ILE A . n A 1 133 ALA 133 133 133 ALA ALA A . n A 1 134 SER 134 134 134 SER SER A . n A 1 135 ARG 135 135 135 ARG ARG A . n A 1 136 TYR 136 136 136 TYR TYR A . n A 1 137 LEU 137 137 137 LEU LEU A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 ASP 140 140 140 ASP ASP A . n A 1 141 SER 141 141 141 SER SER A . n A 1 142 LYS 142 142 142 LYS LYS A . n A 1 143 ASP 143 143 143 ASP ASP A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 LEU 145 145 145 LEU LEU A . n A 1 146 VAL 146 146 146 VAL VAL A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 GLY 148 148 148 GLY GLY A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 GLY 150 150 150 GLY GLY A . n A 1 151 LYS 151 151 151 LYS LYS A . n A 1 152 VAL 152 152 152 VAL VAL A . n A 1 153 GLY 153 153 153 GLY GLY A . n A 1 154 PHE 154 154 154 PHE PHE A . n A 1 155 PRO 155 155 155 PRO PRO A . n A 1 156 GLY 156 156 156 GLY GLY A . n A 1 157 ALA 157 157 157 ALA ALA A . n A 1 158 GLU 158 158 158 GLU GLU A . n A 1 159 HIS 159 159 159 HIS HIS A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 VAL 161 161 161 VAL VAL A . n A 1 162 GLN 162 162 162 GLN GLN A . n A 1 163 LYS 163 163 163 LYS LYS A . n A 1 164 ASP 164 164 164 ASP ASP A . n A 1 165 PHE 165 165 165 PHE PHE A . n A 1 166 ARG 166 166 166 ARG ARG A . n A 1 167 VAL 167 167 167 VAL VAL A . n A 1 168 TYR 168 168 168 TYR TYR A . n A 1 169 GLY 169 169 169 GLY GLY A . n A 1 170 TYR 170 170 170 TYR TYR A . n A 1 171 ASP 171 171 171 ASP ASP A . n A 1 172 ALA 172 172 172 ALA ALA A . n A 1 173 ASP 173 173 173 ASP ASP A . n A 1 174 GLU 174 174 174 GLU GLU A . n A 1 175 THR 175 175 175 THR THR A . n A 1 176 LEU 176 176 176 LEU LEU A . n A 1 177 LEU 177 177 177 LEU LEU A . n A 1 178 GLU 178 178 178 GLU GLU A . n A 1 179 ARG 179 179 179 ARG ARG A . n A 1 180 ALA 180 180 180 ALA ALA A . n A 1 181 THR 181 181 181 THR THR A . n A 1 182 SER 182 182 182 SER SER A . n A 1 183 ASN 183 183 183 ASN ASN A . n A 1 184 LEU 184 184 184 LEU LEU A . n A 1 185 GLY 185 185 185 GLY GLY A . n A 1 186 ILE 186 186 186 ILE ILE A . n A 1 187 ILE 187 187 187 ILE ILE A . n A 1 188 PRO 188 188 188 PRO PRO A . n A 1 189 PHE 189 189 189 PHE PHE A . n A 1 190 ASP 190 190 190 ASP ASP A . n A 1 191 PRO 191 191 191 PRO PRO A . n A 1 192 ALA 192 192 192 ALA ALA A . n A 1 193 ASN 193 193 193 ASN ASN A . n A 1 194 PRO 194 194 194 PRO PRO A . n A 1 195 LYS 195 195 195 LYS LYS A . n A 1 196 LYS 196 196 196 LYS LYS A . n A 1 197 PHE 197 197 197 PHE PHE A . n A 1 198 SER 198 198 198 SER SER A . n A 1 199 ILE 199 199 199 ILE ILE A . n A 1 200 ILE 200 200 200 ILE ILE A . n A 1 201 PHE 201 201 201 PHE PHE A . n A 1 202 GLU 202 202 202 GLU GLU A . n A 1 203 ALA 203 203 203 ALA ALA A . n A 1 204 THR 204 204 204 THR THR A . n A 1 205 PRO 205 205 205 PRO PRO A . n A 1 206 CYS 206 206 206 CYS CYS A . n A 1 207 ALA 207 207 207 ALA ALA A . n A 1 208 ASN 208 208 208 ASN ASN A . n A 1 209 THR 209 209 209 THR THR A . n A 1 210 ILE 210 210 210 ILE ILE A . n A 1 211 PRO 211 211 211 PRO PRO A . n A 1 212 GLU 212 212 212 GLU GLU A . n A 1 213 ALA 213 213 213 ALA ALA A . n A 1 214 VAL 214 214 214 VAL VAL A . n A 1 215 LEU 215 215 215 LEU LEU A . n A 1 216 SER 216 216 216 SER SER A . n A 1 217 GLU 217 217 217 GLU GLU A . n A 1 218 ASN 218 218 218 ASN ASN A . n A 1 219 CYS 219 219 219 CYS CYS A . n A 1 220 VAL 220 220 220 VAL VAL A . n A 1 221 LEU 221 221 221 LEU LEU A . n A 1 222 SER 222 222 222 SER SER A . n A 1 223 THR 223 223 223 THR THR A . n A 1 224 PRO 224 224 224 PRO PRO A . n A 1 225 GLY 225 225 225 GLY GLY A . n A 1 226 ILE 226 226 226 ILE ILE A . n A 1 227 PRO 227 227 227 PRO PRO A . n A 1 228 CYS 228 228 228 CYS CYS A . n A 1 229 ALA 229 229 229 ALA ALA A . n A 1 230 ILE 230 230 230 ILE ILE A . n A 1 231 SER 231 231 231 SER SER A . n A 1 232 GLU 232 232 232 GLU GLU A . n A 1 233 GLU 233 233 233 GLU GLU A . n A 1 234 LEU 234 234 234 LEU LEU A . n A 1 235 ARG 235 235 235 ARG ARG A . n A 1 236 ASP 236 236 236 ASP ASP A . n A 1 237 LYS 237 237 237 LYS LYS A . n A 1 238 TYR 238 238 238 TYR TYR A . n A 1 239 GLU 239 239 239 GLU ALA A . n A 1 240 VAL 240 240 240 VAL VAL A . n A 1 241 GLN 241 241 241 GLN GLN A . n A 1 242 LEU 242 242 242 LEU LEU A . n A 1 243 ILE 243 243 243 ILE ILE A . n A 1 244 ALA 244 244 244 ALA ALA A . n A 1 245 GLU 245 245 245 GLU GLU A . n A 1 246 PRO 246 246 246 PRO PRO A . n A 1 247 LEU 247 247 247 LEU LEU A . n A 1 248 GLY 248 248 248 GLY GLY A . n A 1 249 ILE 249 249 249 ILE ILE A . n A 1 250 GLY 250 250 250 GLY GLY A . n A 1 251 THR 251 251 251 THR THR A . n A 1 252 ALA 252 252 252 ALA ALA A . n A 1 253 SER 253 253 253 SER SER A . n A 1 254 MSE 254 254 254 MSE MSE A . n A 1 255 LEU 255 255 255 LEU LEU A . n A 1 256 TYR 256 256 256 TYR TYR A . n A 1 257 SER 257 257 257 SER SER A . n A 1 258 VAL 258 258 258 VAL VAL A . n A 1 259 LEU 259 259 259 LEU LEU A . n B 1 1 MSE 1 1 ? ? ? B . n B 1 2 ALA 2 2 ? ? ? B . n B 1 3 LEU 3 3 ? ? ? B . n B 1 4 LEU 4 4 ? ? ? B . n B 1 5 THR 5 5 5 THR THR B . n B 1 6 PRO 6 6 6 PRO PRO B . n B 1 7 ASP 7 7 7 ASP ASP B . n B 1 8 ASP 8 8 8 ASP ASP B . n B 1 9 LEU 9 9 9 LEU LEU B . n B 1 10 ILE 10 10 10 ILE ILE B . n B 1 11 ASN 11 11 11 ASN ASN B . n B 1 12 ILE 12 12 12 ILE ILE B . n B 1 13 ASN 13 13 13 ASN ASN B . n B 1 14 MSE 14 14 14 MSE MSE B . n B 1 15 GLN 15 15 15 GLN GLN B . n B 1 16 LEU 16 16 16 LEU LEU B . n B 1 17 GLN 17 17 17 GLN GLN B . n B 1 18 LYS 18 18 18 LYS LYS B . n B 1 19 ALA 19 19 19 ALA ALA B . n B 1 20 ASP 20 20 20 ASP ASP B . n B 1 21 SER 21 21 21 SER SER B . n B 1 22 ALA 22 22 22 ALA ALA B . n B 1 23 VAL 23 23 23 VAL VAL B . n B 1 24 GLN 24 24 24 GLN GLN B . n B 1 25 GLU 25 25 25 GLU GLU B . n B 1 26 VAL 26 26 26 VAL VAL B . n B 1 27 THR 27 27 27 THR THR B . n B 1 28 GLY 28 28 28 GLY GLY B . n B 1 29 LEU 29 29 29 LEU LEU B . n B 1 30 ASP 30 30 30 ASP ASP B . n B 1 31 ILE 31 31 31 ILE ILE B . n B 1 32 LYS 32 32 32 LYS LYS B . n B 1 33 GLY 33 33 33 GLY GLY B . n B 1 34 ILE 34 34 34 ILE ILE B . n B 1 35 CYS 35 35 35 CYS CYS B . n B 1 36 LYS 36 36 36 LYS LYS B . n B 1 37 ALA 37 37 37 ALA ALA B . n B 1 38 LEU 38 38 38 LEU LEU B . n B 1 39 TYR 39 39 39 TYR TYR B . n B 1 40 GLY 40 40 40 GLY GLY B . n B 1 41 THR 41 41 41 THR THR B . n B 1 42 PHE 42 42 42 PHE PHE B . n B 1 43 SER 43 43 43 SER SER B . n B 1 44 SER 44 44 44 SER SER B . n B 1 45 SER 45 45 45 SER SER B . n B 1 46 GLU 46 46 46 GLU GLU B . n B 1 47 LYS 47 47 47 LYS LYS B . n B 1 48 VAL 48 48 48 VAL VAL B . n B 1 49 GLY 49 49 49 GLY GLY B . n B 1 50 ILE 50 50 50 ILE ILE B . n B 1 51 VAL 51 51 51 VAL VAL B . n B 1 52 PRO 52 52 52 PRO PRO B . n B 1 53 VAL 53 53 53 VAL VAL B . n B 1 54 THR 54 54 54 THR THR B . n B 1 55 SER 55 55 55 SER SER B . n B 1 56 GLY 56 56 ? ? ? B . n B 1 57 ASN 57 57 ? ? ? B . n B 1 58 GLY 58 58 ? ? ? B . n B 1 59 ILE 59 59 ? ? ? B . n B 1 60 ILE 60 60 60 ILE ILE B . n B 1 61 GLY 61 61 61 GLY GLY B . n B 1 62 ASN 62 62 62 ASN ASN B . n B 1 63 PHE 63 63 63 PHE PHE B . n B 1 64 SER 64 64 64 SER SER B . n B 1 65 ALA 65 65 65 ALA ALA B . n B 1 66 SER 66 66 66 SER SER B . n B 1 67 LEU 67 67 67 LEU LEU B . n B 1 68 HIS 68 68 68 HIS HIS B . n B 1 69 ALA 69 69 69 ALA ALA B . n B 1 70 ILE 70 70 70 ILE ILE B . n B 1 71 THR 71 71 71 THR THR B . n B 1 72 GLN 72 72 72 GLN GLN B . n B 1 73 TYR 73 73 73 TYR TYR B . n B 1 74 PHE 74 74 74 PHE PHE B . n B 1 75 GLY 75 75 75 GLY GLY B . n B 1 76 PHE 76 76 76 PHE PHE B . n B 1 77 ASP 77 77 77 ASP ASP B . n B 1 78 SER 78 78 78 SER SER B . n B 1 79 PHE 79 79 79 PHE PHE B . n B 1 80 VAL 80 80 80 VAL VAL B . n B 1 81 THR 81 81 81 THR THR B . n B 1 82 ASP 82 82 82 ASP ASP B . n B 1 83 MSE 83 83 83 MSE MSE B . n B 1 84 PRO 84 84 84 PRO PRO B . n B 1 85 ASP 85 85 85 ASP ASP B . n B 1 86 VAL 86 86 86 VAL VAL B . n B 1 87 SER 87 87 87 SER SER B . n B 1 88 GLY 88 88 88 GLY GLY B . n B 1 89 TYR 89 89 89 TYR TYR B . n B 1 90 TYR 90 90 90 TYR TYR B . n B 1 91 GLU 91 91 91 GLU GLU B . n B 1 92 ALA 92 92 92 ALA ALA B . n B 1 93 VAL 93 93 93 VAL VAL B . n B 1 94 GLN 94 94 94 GLN GLN B . n B 1 95 ASN 95 95 95 ASN ASN B . n B 1 96 GLY 96 96 96 GLY GLY B . n B 1 97 ALA 97 97 97 ALA ALA B . n B 1 98 GLU 98 98 98 GLU GLU B . n B 1 99 ILE 99 99 99 ILE ILE B . n B 1 100 ILE 100 100 100 ILE ILE B . n B 1 101 LEU 101 101 101 LEU LEU B . n B 1 102 MSE 102 102 102 MSE MSE B . n B 1 103 ALA 103 103 103 ALA ALA B . n B 1 104 ASP 104 104 104 ASP ASP B . n B 1 105 ASP 105 105 105 ASP ASP B . n B 1 106 ARG 106 106 106 ARG ARG B . n B 1 107 THR 107 107 107 THR THR B . n B 1 108 PHE 108 108 108 PHE PHE B . n B 1 109 LEU 109 109 109 LEU LEU B . n B 1 110 ALA 110 110 110 ALA ALA B . n B 1 111 HIS 111 111 111 HIS HIS B . n B 1 112 ASN 112 112 112 ASN ASN B . n B 1 113 LEU 113 113 113 LEU LEU B . n B 1 114 LYS 114 114 114 LYS LYS B . n B 1 115 ASN 115 115 115 ASN ASN B . n B 1 116 GLY 116 116 116 GLY GLY B . n B 1 117 LYS 117 117 117 LYS LYS B . n B 1 118 MSE 118 118 118 MSE MSE B . n B 1 119 ALA 119 119 119 ALA ALA B . n B 1 120 ASN 120 120 120 ASN ASN B . n B 1 121 ASN 121 121 121 ASN ASN B . n B 1 122 GLN 122 122 122 GLN GLN B . n B 1 123 PRO 123 123 123 PRO PRO B . n B 1 124 CYS 124 124 124 CYS CYS B . n B 1 125 THR 125 125 125 THR THR B . n B 1 126 GLY 126 126 126 GLY GLY B . n B 1 127 ILE 127 127 127 ILE ILE B . n B 1 128 ILE 128 128 128 ILE ILE B . n B 1 129 TYR 129 129 129 TYR TYR B . n B 1 130 ALA 130 130 130 ALA ALA B . n B 1 131 GLU 131 131 131 GLU GLU B . n B 1 132 ILE 132 132 132 ILE ILE B . n B 1 133 ALA 133 133 133 ALA ALA B . n B 1 134 SER 134 134 134 SER SER B . n B 1 135 ARG 135 135 135 ARG ARG B . n B 1 136 TYR 136 136 136 TYR TYR B . n B 1 137 LEU 137 137 137 LEU LEU B . n B 1 138 LYS 138 138 138 LYS LYS B . n B 1 139 ALA 139 139 139 ALA ALA B . n B 1 140 ASP 140 140 140 ASP ASP B . n B 1 141 SER 141 141 141 SER SER B . n B 1 142 LYS 142 142 142 LYS LYS B . n B 1 143 ASP 143 143 143 ASP ASP B . n B 1 144 VAL 144 144 144 VAL VAL B . n B 1 145 LEU 145 145 145 LEU LEU B . n B 1 146 VAL 146 146 146 VAL VAL B . n B 1 147 VAL 147 147 147 VAL VAL B . n B 1 148 GLY 148 148 148 GLY GLY B . n B 1 149 LEU 149 149 149 LEU LEU B . n B 1 150 GLY 150 150 150 GLY GLY B . n B 1 151 LYS 151 151 151 LYS LYS B . n B 1 152 VAL 152 152 152 VAL VAL B . n B 1 153 GLY 153 153 153 GLY GLY B . n B 1 154 PHE 154 154 154 PHE PHE B . n B 1 155 PRO 155 155 155 PRO PRO B . n B 1 156 GLY 156 156 156 GLY GLY B . n B 1 157 ALA 157 157 157 ALA ALA B . n B 1 158 GLU 158 158 158 GLU GLU B . n B 1 159 HIS 159 159 159 HIS HIS B . n B 1 160 LEU 160 160 160 LEU LEU B . n B 1 161 VAL 161 161 161 VAL VAL B . n B 1 162 GLN 162 162 162 GLN GLN B . n B 1 163 LYS 163 163 163 LYS LYS B . n B 1 164 ASP 164 164 164 ASP ASP B . n B 1 165 PHE 165 165 165 PHE PHE B . n B 1 166 ARG 166 166 166 ARG ARG B . n B 1 167 VAL 167 167 167 VAL VAL B . n B 1 168 TYR 168 168 168 TYR TYR B . n B 1 169 GLY 169 169 169 GLY GLY B . n B 1 170 TYR 170 170 170 TYR TYR B . n B 1 171 ASP 171 171 171 ASP ASP B . n B 1 172 ALA 172 172 172 ALA ALA B . n B 1 173 ASP 173 173 173 ASP ASP B . n B 1 174 GLU 174 174 174 GLU GLU B . n B 1 175 THR 175 175 175 THR THR B . n B 1 176 LEU 176 176 176 LEU LEU B . n B 1 177 LEU 177 177 177 LEU LEU B . n B 1 178 GLU 178 178 178 GLU GLU B . n B 1 179 ARG 179 179 179 ARG ARG B . n B 1 180 ALA 180 180 180 ALA ALA B . n B 1 181 THR 181 181 181 THR THR B . n B 1 182 SER 182 182 182 SER SER B . n B 1 183 ASN 183 183 183 ASN ASN B . n B 1 184 LEU 184 184 184 LEU LEU B . n B 1 185 GLY 185 185 185 GLY GLY B . n B 1 186 ILE 186 186 186 ILE ILE B . n B 1 187 ILE 187 187 187 ILE ILE B . n B 1 188 PRO 188 188 188 PRO PRO B . n B 1 189 PHE 189 189 189 PHE PHE B . n B 1 190 ASP 190 190 190 ASP ASP B . n B 1 191 PRO 191 191 191 PRO PRO B . n B 1 192 ALA 192 192 192 ALA ALA B . n B 1 193 ASN 193 193 193 ASN ASN B . n B 1 194 PRO 194 194 194 PRO PRO B . n B 1 195 LYS 195 195 195 LYS LYS B . n B 1 196 LYS 196 196 196 LYS LYS B . n B 1 197 PHE 197 197 197 PHE PHE B . n B 1 198 SER 198 198 198 SER SER B . n B 1 199 ILE 199 199 199 ILE ILE B . n B 1 200 ILE 200 200 200 ILE ILE B . n B 1 201 PHE 201 201 201 PHE PHE B . n B 1 202 GLU 202 202 202 GLU GLU B . n B 1 203 ALA 203 203 203 ALA ALA B . n B 1 204 THR 204 204 204 THR THR B . n B 1 205 PRO 205 205 205 PRO PRO B . n B 1 206 CYS 206 206 206 CYS CYS B . n B 1 207 ALA 207 207 207 ALA ALA B . n B 1 208 ASN 208 208 208 ASN ASN B . n B 1 209 THR 209 209 209 THR THR B . n B 1 210 ILE 210 210 210 ILE ILE B . n B 1 211 PRO 211 211 211 PRO PRO B . n B 1 212 GLU 212 212 212 GLU GLU B . n B 1 213 ALA 213 213 213 ALA ALA B . n B 1 214 VAL 214 214 214 VAL VAL B . n B 1 215 LEU 215 215 215 LEU LEU B . n B 1 216 SER 216 216 216 SER SER B . n B 1 217 GLU 217 217 217 GLU GLU B . n B 1 218 ASN 218 218 218 ASN ASN B . n B 1 219 CYS 219 219 219 CYS CYS B . n B 1 220 VAL 220 220 220 VAL VAL B . n B 1 221 LEU 221 221 221 LEU LEU B . n B 1 222 SER 222 222 222 SER SER B . n B 1 223 THR 223 223 223 THR THR B . n B 1 224 PRO 224 224 224 PRO PRO B . n B 1 225 GLY 225 225 225 GLY GLY B . n B 1 226 ILE 226 226 226 ILE ILE B . n B 1 227 PRO 227 227 227 PRO PRO B . n B 1 228 CYS 228 228 228 CYS CYS B . n B 1 229 ALA 229 229 229 ALA ALA B . n B 1 230 ILE 230 230 230 ILE ILE B . n B 1 231 SER 231 231 231 SER SER B . n B 1 232 GLU 232 232 232 GLU GLU B . n B 1 233 GLU 233 233 233 GLU GLU B . n B 1 234 LEU 234 234 234 LEU LEU B . n B 1 235 ARG 235 235 235 ARG ARG B . n B 1 236 ASP 236 236 236 ASP ASP B . n B 1 237 LYS 237 237 237 LYS LYS B . n B 1 238 TYR 238 238 238 TYR TYR B . n B 1 239 GLU 239 239 239 GLU ALA B . n B 1 240 VAL 240 240 240 VAL VAL B . n B 1 241 GLN 241 241 241 GLN GLN B . n B 1 242 LEU 242 242 242 LEU LEU B . n B 1 243 ILE 243 243 243 ILE ILE B . n B 1 244 ALA 244 244 244 ALA ALA B . n B 1 245 GLU 245 245 245 GLU GLU B . n B 1 246 PRO 246 246 246 PRO PRO B . n B 1 247 LEU 247 247 247 LEU LEU B . n B 1 248 GLY 248 248 248 GLY GLY B . n B 1 249 ILE 249 249 249 ILE ILE B . n B 1 250 GLY 250 250 250 GLY GLY B . n B 1 251 THR 251 251 251 THR THR B . n B 1 252 ALA 252 252 252 ALA ALA B . n B 1 253 SER 253 253 253 SER SER B . n B 1 254 MSE 254 254 254 MSE MSE B . n B 1 255 LEU 255 255 255 LEU LEU B . n B 1 256 TYR 256 256 256 TYR TYR B . n B 1 257 SER 257 257 257 SER SER B . n B 1 258 VAL 258 258 258 VAL VAL B . n B 1 259 LEU 259 259 259 LEU LEU B . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 14 A MSE 14 ? MET SELENOMETHIONINE 2 A MSE 83 A MSE 83 ? MET SELENOMETHIONINE 3 A MSE 102 A MSE 102 ? MET SELENOMETHIONINE 4 A MSE 118 A MSE 118 ? MET SELENOMETHIONINE 5 A MSE 254 A MSE 254 ? MET SELENOMETHIONINE 6 B MSE 14 B MSE 14 ? MET SELENOMETHIONINE 7 B MSE 83 B MSE 83 ? MET SELENOMETHIONINE 8 B MSE 102 B MSE 102 ? MET SELENOMETHIONINE 9 B MSE 118 B MSE 118 ? MET SELENOMETHIONINE 10 B MSE 254 B MSE 254 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 3 software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,I 2 1 B,F,G,H,J 3 1,2 A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 3 'ABSA (A^2)' 10690 ? 3 MORE -122 ? 3 'SSA (A^2)' 41660 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_755 -x+2,-y,z -1.0000000000 0.0000000000 0.0000000000 159.3000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? I HOH . ? A HOH 1019 ? 1_555 NA ? D NA . ? A NA 902 ? 1_555 O ? A THR 204 ? A THR 204 ? 1_555 131.4 ? 2 O ? I HOH . ? A HOH 1019 ? 1_555 NA ? D NA . ? A NA 902 ? 1_555 O ? A PRO 227 ? A PRO 227 ? 1_555 68.6 ? 3 O ? A THR 204 ? A THR 204 ? 1_555 NA ? D NA . ? A NA 902 ? 1_555 O ? A PRO 227 ? A PRO 227 ? 1_555 114.6 ? 4 O ? I HOH . ? A HOH 1019 ? 1_555 NA ? D NA . ? A NA 902 ? 1_555 O ? A CYS 206 ? A CYS 206 ? 1_555 120.1 ? 5 O ? A THR 204 ? A THR 204 ? 1_555 NA ? D NA . ? A NA 902 ? 1_555 O ? A CYS 206 ? A CYS 206 ? 1_555 106.7 ? 6 O ? A PRO 227 ? A PRO 227 ? 1_555 NA ? D NA . ? A NA 902 ? 1_555 O ? A CYS 206 ? A CYS 206 ? 1_555 75.7 ? 7 O ? I HOH . ? A HOH 1019 ? 1_555 NA ? D NA . ? A NA 902 ? 1_555 OE2 ? A GLU 202 ? A GLU 202 ? 1_555 77.9 ? 8 O ? A THR 204 ? A THR 204 ? 1_555 NA ? D NA . ? A NA 902 ? 1_555 OE2 ? A GLU 202 ? A GLU 202 ? 1_555 84.6 ? 9 O ? A PRO 227 ? A PRO 227 ? 1_555 NA ? D NA . ? A NA 902 ? 1_555 OE2 ? A GLU 202 ? A GLU 202 ? 1_555 146.2 ? 10 O ? A CYS 206 ? A CYS 206 ? 1_555 NA ? D NA . ? A NA 902 ? 1_555 OE2 ? A GLU 202 ? A GLU 202 ? 1_555 127.2 ? 11 O ? I HOH . ? A HOH 1019 ? 1_555 NA ? D NA . ? A NA 902 ? 1_555 OE1 ? A GLU 202 ? A GLU 202 ? 1_555 103.8 ? 12 O ? A THR 204 ? A THR 204 ? 1_555 NA ? D NA . ? A NA 902 ? 1_555 OE1 ? A GLU 202 ? A GLU 202 ? 1_555 92.8 ? 13 O ? A PRO 227 ? A PRO 227 ? 1_555 NA ? D NA . ? A NA 902 ? 1_555 OE1 ? A GLU 202 ? A GLU 202 ? 1_555 149.6 ? 14 O ? A CYS 206 ? A CYS 206 ? 1_555 NA ? D NA . ? A NA 902 ? 1_555 OE1 ? A GLU 202 ? A GLU 202 ? 1_555 84.2 ? 15 OE2 ? A GLU 202 ? A GLU 202 ? 1_555 NA ? D NA . ? A NA 902 ? 1_555 OE1 ? A GLU 202 ? A GLU 202 ? 1_555 43.2 ? 16 O ? B CYS 206 ? B CYS 206 ? 1_555 NA ? G NA . ? B NA 902 ? 1_555 O ? J HOH . ? B HOH 1019 ? 1_555 127.2 ? 17 O ? B CYS 206 ? B CYS 206 ? 1_555 NA ? G NA . ? B NA 902 ? 1_555 O ? B THR 204 ? B THR 204 ? 1_555 104.3 ? 18 O ? J HOH . ? B HOH 1019 ? 1_555 NA ? G NA . ? B NA 902 ? 1_555 O ? B THR 204 ? B THR 204 ? 1_555 124.1 ? 19 O ? B CYS 206 ? B CYS 206 ? 1_555 NA ? G NA . ? B NA 902 ? 1_555 O ? B PRO 227 ? B PRO 227 ? 1_555 74.1 ? 20 O ? J HOH . ? B HOH 1019 ? 1_555 NA ? G NA . ? B NA 902 ? 1_555 O ? B PRO 227 ? B PRO 227 ? 1_555 72.9 ? 21 O ? B THR 204 ? B THR 204 ? 1_555 NA ? G NA . ? B NA 902 ? 1_555 O ? B PRO 227 ? B PRO 227 ? 1_555 106.9 ? 22 O ? B CYS 206 ? B CYS 206 ? 1_555 NA ? G NA . ? B NA 902 ? 1_555 OE1 ? B GLU 202 ? B GLU 202 ? 1_555 90.9 ? 23 O ? J HOH . ? B HOH 1019 ? 1_555 NA ? G NA . ? B NA 902 ? 1_555 OE1 ? B GLU 202 ? B GLU 202 ? 1_555 103.3 ? 24 O ? B THR 204 ? B THR 204 ? 1_555 NA ? G NA . ? B NA 902 ? 1_555 OE1 ? B GLU 202 ? B GLU 202 ? 1_555 95.1 ? 25 O ? B PRO 227 ? B PRO 227 ? 1_555 NA ? G NA . ? B NA 902 ? 1_555 OE1 ? B GLU 202 ? B GLU 202 ? 1_555 155.7 ? 26 O ? B CYS 206 ? B CYS 206 ? 1_555 NA ? G NA . ? B NA 902 ? 1_555 OE2 ? B GLU 202 ? B GLU 202 ? 1_555 135.7 ? 27 O ? J HOH . ? B HOH 1019 ? 1_555 NA ? G NA . ? B NA 902 ? 1_555 OE2 ? B GLU 202 ? B GLU 202 ? 1_555 72.5 ? 28 O ? B THR 204 ? B THR 204 ? 1_555 NA ? G NA . ? B NA 902 ? 1_555 OE2 ? B GLU 202 ? B GLU 202 ? 1_555 86.1 ? 29 O ? B PRO 227 ? B PRO 227 ? 1_555 NA ? G NA . ? B NA 902 ? 1_555 OE2 ? B GLU 202 ? B GLU 202 ? 1_555 144.4 ? 30 OE1 ? B GLU 202 ? B GLU 202 ? 1_555 NA ? G NA . ? B NA 902 ? 1_555 OE2 ? B GLU 202 ? B GLU 202 ? 1_555 44.9 ? 31 O7N ? F NAD . ? B NAD 901 ? 1_555 MG ? H MG . ? B MG 903 ? 1_555 OE2 ? B GLU 245 ? B GLU 245 ? 1_555 121.1 ? 32 O7N ? C NAD . ? A NAD 901 ? 1_555 MG ? E MG . ? A MG 903 ? 1_555 OE2 ? A GLU 245 ? A GLU 245 ? 1_555 124.3 ? 33 O7N ? C NAD . ? A NAD 901 ? 1_555 MG ? E MG . ? A MG 903 ? 1_555 OH ? A TYR 129 ? A TYR 129 ? 1_555 115.3 ? 34 OE2 ? A GLU 245 ? A GLU 245 ? 1_555 MG ? E MG . ? A MG 903 ? 1_555 OH ? A TYR 129 ? A TYR 129 ? 1_555 90.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-06-12 2 'Structure model' 1 1 2013-07-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 80.2612 27.5105 -20.4510 0.0188 0.1993 0.0246 -0.0001 -0.0069 -0.0180 0.9941 1.8065 0.5123 1.1931 -0.2180 -0.2295 0.0476 -0.0182 -0.0294 0.0220 -0.0735 -0.0457 0.1022 -0.0207 0.0018 'X-RAY DIFFRACTION' 2 ? refined 105.3078 8.5089 -33.3776 0.1477 0.1734 0.0511 -0.0681 0.0626 -0.0532 1.8726 5.1984 0.1760 2.7797 0.1649 -0.1445 -0.3569 0.3185 0.0384 -0.0113 -0.2415 -0.4964 -0.6142 -0.0223 -0.1346 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 5 A 259 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 A 901 A 903 ? . . . . ? 'X-RAY DIFFRACTION' 3 2 B 5 B 259 ? . . . . ? 'X-RAY DIFFRACTION' 4 2 B 901 B 903 ? . . . . ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal XDS 'data scaling' . ? 1 SHARP phasing . ? 2 REFMAC refinement 5.7.0029 ? 3 XDS 'data reduction' . ? 4 XSCALE 'data scaling' . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 THR _pdbx_validate_close_contact.auth_seq_id_1 27 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 1016 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 85 ? ? 55.98 -136.35 2 1 ASP A 104 ? ? -110.43 -164.36 3 1 PRO A 205 ? ? -87.25 38.82 4 1 LEU A 247 ? ? -158.42 -39.74 5 1 ASP B 85 ? ? 49.64 -137.22 6 1 ASP B 104 ? ? -115.41 -163.88 7 1 PRO B 205 ? ? -85.74 37.48 8 1 LEU B 247 ? ? -158.02 -37.44 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 239 ? CG ? A GLU 239 CG 2 1 Y 1 A GLU 239 ? CD ? A GLU 239 CD 3 1 Y 1 A GLU 239 ? OE1 ? A GLU 239 OE1 4 1 Y 1 A GLU 239 ? OE2 ? A GLU 239 OE2 5 1 Y 1 B GLU 239 ? CG ? B GLU 239 CG 6 1 Y 1 B GLU 239 ? CD ? B GLU 239 CD 7 1 Y 1 B GLU 239 ? OE1 ? B GLU 239 OE1 8 1 Y 1 B GLU 239 ? OE2 ? B GLU 239 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A LEU 3 ? A LEU 3 4 1 Y 1 A LEU 4 ? A LEU 4 5 1 Y 1 A GLY 56 ? A GLY 56 6 1 Y 1 A ASN 57 ? A ASN 57 7 1 Y 1 A GLY 58 ? A GLY 58 8 1 Y 1 A ILE 59 ? A ILE 59 9 1 Y 1 B MSE 1 ? B MSE 1 10 1 Y 1 B ALA 2 ? B ALA 2 11 1 Y 1 B LEU 3 ? B LEU 3 12 1 Y 1 B LEU 4 ? B LEU 4 13 1 Y 1 B GLY 56 ? B GLY 56 14 1 Y 1 B ASN 57 ? B ASN 57 15 1 Y 1 B GLY 58 ? B GLY 58 16 1 Y 1 B ILE 59 ? B ILE 59 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 NICOTINAMIDE-ADENINE-DINUCLEOTIDE NAD 3 'SODIUM ION' NA 4 'MAGNESIUM ION' MG 5 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAD 1 901 901 NAD NAD A . D 3 NA 1 902 903 NA NA A . E 4 MG 1 903 904 MG MG A . F 2 NAD 1 901 901 NAD NAD B . G 3 NA 1 902 903 NA NA B . H 4 MG 1 903 904 MG MG B . I 5 HOH 1 1001 3 HOH HOH A . I 5 HOH 2 1002 6 HOH HOH A . I 5 HOH 3 1003 8 HOH HOH A . I 5 HOH 4 1004 9 HOH HOH A . I 5 HOH 5 1005 12 HOH HOH A . I 5 HOH 6 1006 13 HOH HOH A . I 5 HOH 7 1007 14 HOH HOH A . I 5 HOH 8 1008 16 HOH HOH A . I 5 HOH 9 1009 17 HOH HOH A . I 5 HOH 10 1010 18 HOH HOH A . I 5 HOH 11 1011 19 HOH HOH A . I 5 HOH 12 1012 20 HOH HOH A . I 5 HOH 13 1013 21 HOH HOH A . I 5 HOH 14 1014 22 HOH HOH A . I 5 HOH 15 1015 23 HOH HOH A . I 5 HOH 16 1016 24 HOH HOH A . I 5 HOH 17 1017 25 HOH HOH A . I 5 HOH 18 1018 28 HOH HOH A . I 5 HOH 19 1019 29 HOH HOH A . I 5 HOH 20 1020 30 HOH HOH A . I 5 HOH 21 1021 34 HOH HOH A . I 5 HOH 22 1022 36 HOH HOH A . I 5 HOH 23 1023 37 HOH HOH A . I 5 HOH 24 1024 39 HOH HOH A . I 5 HOH 25 1025 40 HOH HOH A . I 5 HOH 26 1026 46 HOH HOH A . I 5 HOH 27 1027 47 HOH HOH A . I 5 HOH 28 1028 50 HOH HOH A . I 5 HOH 29 1029 52 HOH HOH A . I 5 HOH 30 1030 53 HOH HOH A . J 5 HOH 1 1001 5 HOH HOH B . J 5 HOH 2 1002 7 HOH HOH B . J 5 HOH 3 1003 10 HOH HOH B . J 5 HOH 4 1004 11 HOH HOH B . J 5 HOH 5 1005 15 HOH HOH B . J 5 HOH 6 1006 26 HOH HOH B . J 5 HOH 7 1007 27 HOH HOH B . J 5 HOH 8 1008 32 HOH HOH B . J 5 HOH 9 1009 33 HOH HOH B . J 5 HOH 10 1010 35 HOH HOH B . J 5 HOH 11 1011 38 HOH HOH B . J 5 HOH 12 1012 41 HOH HOH B . J 5 HOH 13 1013 42 HOH HOH B . J 5 HOH 14 1014 43 HOH HOH B . J 5 HOH 15 1015 44 HOH HOH B . J 5 HOH 16 1016 45 HOH HOH B . J 5 HOH 17 1017 48 HOH HOH B . J 5 HOH 18 1018 49 HOH HOH B . J 5 HOH 19 1019 51 HOH HOH B . #