HEADER HYDROLASE 09-MAR-13 4JKK TITLE CRYSTAL STRUCTURE OF STREPTOCOCCUS AGALACTIAE BETA-GLUCURONIDASE IN TITLE 2 SPACE GROUP I222 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-GLUCURONIDASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.31; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS AGALACTIAE; SOURCE 3 ORGANISM_TAXID: 208435; SOURCE 4 STRAIN: ATCC BAA-611 / 2603 V/R; SOURCE 5 GENE: SAG0698; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-AI (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS ALPHA/BETA BARREL, BETA-SANDWICH, SUGAR-BINDING DOMAIN, GLYCOSYL KEYWDS 2 HYDROLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.D.WALLACE,M.R.REDINBO REVDAT 3 28-FEB-24 4JKK 1 REMARK SEQADV REVDAT 2 21-OCT-15 4JKK 1 JRNL REVDAT 1 17-SEP-14 4JKK 0 JRNL AUTH B.D.WALLACE,A.B.ROBERTS,R.M.POLLET,J.D.INGLE,K.A.BIERNAT, JRNL AUTH 2 S.J.PELLOCK,M.K.VENKATESH,L.GUTHRIE,S.K.O'NEAL,S.J.ROBINSON, JRNL AUTH 3 M.DOLLINGER,E.FIGUEROA,S.R.MCSHANE,R.D.COHEN,J.JIN,S.V.FRYE, JRNL AUTH 4 W.C.ZAMBONI,C.PEPE-RANNEY,S.MANI,L.KELLY,M.R.REDINBO JRNL TITL STRUCTURE AND INHIBITION OF MICROBIOME BETA-GLUCURONIDASES JRNL TITL 2 ESSENTIAL TO THE ALLEVIATION OF CANCER DRUG TOXICITY. JRNL REF CHEM.BIOL. V. 22 1238 2015 JRNL REFN ISSN 1074-5521 JRNL PMID 26364932 JRNL DOI 10.1016/J.CHEMBIOL.2015.08.005 REMARK 2 REMARK 2 RESOLUTION. 2.59 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.59 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 99.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 18110 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.150 REMARK 3 R VALUE (WORKING SET) : 0.146 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 938 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.59 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.66 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1099 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.49 REMARK 3 BIN R VALUE (WORKING SET) : 0.1640 REMARK 3 BIN FREE R VALUE SET COUNT : 53 REMARK 3 BIN FREE R VALUE : 0.2680 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4780 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 295 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.24000 REMARK 3 B22 (A**2) : 0.84000 REMARK 3 B33 (A**2) : -0.60000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.311 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.208 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.616 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.900 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4950 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6725 ; 1.436 ; 1.946 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 600 ; 6.360 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 260 ;37.319 ;24.846 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 855 ;17.994 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;19.167 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 727 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3828 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2952 ; 0.926 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4799 ; 1.820 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1998 ; 2.731 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1919 ; 4.531 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4JKK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000078162. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-AUG-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL WITH K-B BIOMORPH REMARK 200 MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18183 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.590 REMARK 200 RESOLUTION RANGE LOW (A) : 99.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.12800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.36300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20-28% PEG 3350, 0.1-0.3 M KSCN, 0.02% REMARK 280 SODIUM AZIDE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 34.40700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.91450 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 99.66600 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 34.40700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.91450 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 99.66600 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 34.40700 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 41.91450 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 99.66600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 34.40700 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 41.91450 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 99.66600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 78440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -85.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 MG MG A 601 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 985 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 PHE A 360 REMARK 465 ASN A 361 REMARK 465 ALA A 362 REMARK 465 SER A 363 REMARK 465 LEU A 364 REMARK 465 ASP A 365 REMARK 465 LEU A 366 REMARK 465 SER A 367 REMARK 465 PRO A 368 REMARK 465 LYS A 369 REMARK 465 SER A 597 REMARK 465 VAL A 598 REMARK 465 LYS A 599 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 70 CG CD CE NZ REMARK 470 GLU A 73 CG CD OE1 OE2 REMARK 470 ARG A 189 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 208 CG CD CE NZ REMARK 470 GLU A 211 CG CD OE1 OE2 REMARK 470 ARG A 213 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 257 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CG GLU A 36 O HOH A 957 1.77 REMARK 500 OE1 GLU A 552 O HOH A 981 1.95 REMARK 500 NZ LYS A 425 O HOH A 960 2.03 REMARK 500 NE2 GLN A 358 O HOH A 908 2.07 REMARK 500 O HOH A 944 O HOH A 957 2.10 REMARK 500 O HOH A 864 O HOH A 865 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 42 154.08 174.20 REMARK 500 SER A 83 155.64 172.59 REMARK 500 GLU A 147 -4.28 71.16 REMARK 500 ASN A 158 34.72 -96.64 REMARK 500 ASP A 160 48.82 -100.92 REMARK 500 SER A 230 -6.79 79.67 REMARK 500 LEU A 243 13.97 54.85 REMARK 500 ASP A 262 143.71 -171.17 REMARK 500 ILE A 300 -66.88 72.65 REMARK 500 HIS A 329 54.68 -118.98 REMARK 500 PRO A 352 40.46 -77.12 REMARK 500 ASN A 371 -157.16 -179.85 REMARK 500 GLN A 378 48.03 -91.68 REMARK 500 TRP A 467 -58.67 -121.18 REMARK 500 TYR A 518 -22.07 93.96 REMARK 500 LYS A 595 25.59 124.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4JKL RELATED DB: PDB REMARK 900 RELATED ID: 4JKM RELATED DB: PDB DBREF 4JKK A 1 599 UNP Q8E0N2 Q8E0N2_STRA5 1 599 SEQADV 4JKK SER A -2 UNP Q8E0N2 EXPRESSION TAG SEQADV 4JKK ASN A -1 UNP Q8E0N2 EXPRESSION TAG SEQADV 4JKK ALA A 0 UNP Q8E0N2 EXPRESSION TAG SEQRES 1 A 602 SER ASN ALA MET LEU TYR PRO LEU LEU THR LYS THR ARG SEQRES 2 A 602 ASN THR TYR ASP LEU GLY GLY ILE TRP ASN PHE LYS LEU SEQRES 3 A 602 GLY GLU HIS ASN PRO ASN GLU LEU LEU PRO SER ASP GLU SEQRES 4 A 602 VAL MET VAL ILE PRO THR SER PHE ASN ASP LEU MET VAL SEQRES 5 A 602 SER LYS GLU LYS ARG ASP TYR ILE GLY ASP PHE TRP TYR SEQRES 6 A 602 GLU LYS VAL ILE GLU VAL PRO LYS VAL SER GLU ASP GLU SEQRES 7 A 602 GLU MET VAL LEU ARG PHE GLY SER VAL THR HIS GLN ALA SEQRES 8 A 602 LYS ILE TYR VAL ASP GLY VAL LEU VAL GLY GLU HIS LYS SEQRES 9 A 602 GLY GLY PHE THR PRO PHE GLU VAL LEU VAL PRO GLU CYS SEQRES 10 A 602 LYS TYR ASN ASN GLU LYS ILE LYS VAL SER ILE CYS ALA SEQRES 11 A 602 ASN ASN VAL LEU ASP TYR THR THR LEU PRO VAL GLY ASN SEQRES 12 A 602 TYR SER GLU ILE ILE GLN GLU ASP GLY SER ILE LYS LYS SEQRES 13 A 602 LYS VAL ARG GLU ASN PHE ASP PHE PHE ASN TYR ALA GLY SEQRES 14 A 602 VAL HIS ARG PRO LEU LYS LEU MET ILE ARG PRO LYS ASN SEQRES 15 A 602 HIS ILE PHE ASP ILE THR ILE THR SER ARG LEU SER ASP SEQRES 16 A 602 ASP LEU GLN SER ALA ASP LEU HIS PHE LEU VAL GLU THR SEQRES 17 A 602 ASN GLN LYS VAL ASP GLU VAL ARG ILE SER VAL PHE ASP SEQRES 18 A 602 GLU ASP ASN LYS LEU VAL GLY GLU THR LYS ASP SER ARG SEQRES 19 A 602 LEU PHE LEU SER ASP VAL HIS LEU TRP GLU VAL LEU ASN SEQRES 20 A 602 ALA TYR LEU TYR THR ALA ARG VAL GLU ILE PHE VAL ASP SEQRES 21 A 602 ASN GLN LEU GLN ASP VAL TYR GLU GLU ASN PHE GLY LEU SEQRES 22 A 602 ARG GLU ILE GLU VAL THR ASN GLY GLN PHE LEU LEU ASN SEQRES 23 A 602 ARG LYS PRO ILE TYR PHE LYS GLY PHE GLY LYS HIS GLU SEQRES 24 A 602 ASP THR PHE ILE ASN GLY ARG GLY LEU ASN GLU ALA ALA SEQRES 25 A 602 ASN LEU MET ASP LEU ASN LEU LEU LYS ASP MET GLY ALA SEQRES 26 A 602 ASN SER PHE ARG THR SER HIS TYR PRO TYR SER GLU GLU SEQRES 27 A 602 MET MET ARG LEU ALA ASP ARG MET GLY VAL LEU VAL ILE SEQRES 28 A 602 ASP GLU VAL PRO ALA VAL GLY LEU PHE GLN ASN PHE ASN SEQRES 29 A 602 ALA SER LEU ASP LEU SER PRO LYS ASP ASN GLY THR TRP SEQRES 30 A 602 ASN LEU MET GLN THR LYS ALA ALA HIS GLU GLN ALA ILE SEQRES 31 A 602 GLN GLU LEU VAL LYS ARG ASP LYS ASN HIS PRO SER VAL SEQRES 32 A 602 VAL MET TRP VAL VAL ALA ASN GLU PRO ALA SER HIS GLU SEQRES 33 A 602 ALA GLY ALA HIS ASP TYR PHE GLU PRO LEU VAL LYS LEU SEQRES 34 A 602 TYR LYS ASP LEU ASP PRO GLN LYS ARG PRO VAL THR LEU SEQRES 35 A 602 VAL ASN ILE LEU MET ALA THR PRO ASP ARG ASP GLN VAL SEQRES 36 A 602 MET ASP LEU VAL ASP VAL VAL CYS LEU ASN ARG TYR TYR SEQRES 37 A 602 GLY TRP TYR VAL ASP HIS GLY ASP LEU THR ASN ALA GLU SEQRES 38 A 602 VAL GLY ILE ARG LYS GLU LEU LEU GLU TRP GLN ASP LYS SEQRES 39 A 602 PHE PRO ASP LYS PRO ILE ILE ILE THR GLU TYR GLY ALA SEQRES 40 A 602 ASP THR LEU PRO GLY LEU HIS SER THR TRP ASN ILE PRO SEQRES 41 A 602 TYR THR GLU GLU PHE GLN CYS ASP PHE TYR GLU MET SER SEQRES 42 A 602 HIS ARG VAL PHE ASP GLY ILE PRO ASN LEU VAL GLY GLU SEQRES 43 A 602 GLN VAL TRP ASN PHE ALA ASP PHE GLU THR ASN LEU MET SEQRES 44 A 602 ILE LEU ARG VAL GLN GLY ASN HIS LYS GLY LEU PHE SER SEQRES 45 A 602 ARG ASN ARG GLN PRO LYS GLN VAL VAL LYS GLU PHE LYS SEQRES 46 A 602 LYS ARG TRP MET THR ILE PRO HIS TYR HIS ASN LYS LYS SEQRES 47 A 602 ASN SER VAL LYS HET MG A 601 1 HETNAM MG MAGNESIUM ION FORMUL 2 MG MG 2+ FORMUL 3 HOH *295(H2 O) HELIX 1 1 ASN A 45 MET A 48 5 4 HELIX 2 2 SER A 50 ASP A 55 1 6 HELIX 3 3 PRO A 112 TYR A 116 5 5 HELIX 4 4 ASN A 306 MET A 320 1 15 HELIX 5 5 SER A 333 GLY A 344 1 12 HELIX 6 6 THR A 379 LYS A 395 1 17 HELIX 7 7 GLY A 415 ASP A 431 1 17 HELIX 8 8 VAL A 452 VAL A 456 5 5 HELIX 9 9 ASP A 473 PHE A 492 1 20 HELIX 10 10 THR A 519 ASP A 535 1 17 HELIX 11 11 GLN A 576 MET A 586 1 11 SHEET 1 A 4 ASN A 11 ASP A 14 0 SHEET 2 A 4 LEU A 171 PRO A 177 -1 O LEU A 173 N TYR A 13 SHEET 3 A 4 GLU A 75 PHE A 81 -1 N VAL A 78 O MET A 174 SHEET 4 A 4 PHE A 107 LEU A 110 -1 O VAL A 109 N LEU A 79 SHEET 1 B 6 VAL A 37 ILE A 40 0 SHEET 2 B 6 GLY A 17 LEU A 23 -1 N TRP A 19 O MET A 38 SHEET 3 B 6 ASP A 59 GLU A 67 -1 O TRP A 61 N LYS A 22 SHEET 4 B 6 LYS A 120 ASN A 128 -1 O ILE A 121 N ILE A 66 SHEET 5 B 6 GLN A 87 VAL A 92 -1 N TYR A 91 O SER A 124 SHEET 6 B 6 VAL A 95 LYS A 101 -1 O VAL A 97 N ILE A 90 SHEET 1 C 2 THR A 42 SER A 43 0 SHEET 2 C 2 GLY A 166 VAL A 167 -1 O VAL A 167 N THR A 42 SHEET 1 D 2 GLY A 139 ILE A 145 0 SHEET 2 D 2 ILE A 151 GLU A 157 -1 O LYS A 152 N ILE A 144 SHEET 1 E 3 ILE A 181 LEU A 190 0 SHEET 2 E 3 ALA A 197 THR A 205 -1 O GLU A 204 N ASP A 183 SHEET 3 E 3 ARG A 231 LEU A 234 -1 O LEU A 232 N LEU A 199 SHEET 1 F 4 LEU A 223 THR A 227 0 SHEET 2 F 4 GLU A 211 PHE A 217 -1 N ILE A 214 O THR A 227 SHEET 3 F 4 TYR A 248 PHE A 255 -1 O ARG A 251 N SER A 215 SHEET 4 F 4 LEU A 260 PHE A 268 -1 O GLU A 266 N ALA A 250 SHEET 1 G 3 ILE A 273 THR A 276 0 SHEET 2 G 3 GLN A 279 LEU A 282 -1 O LEU A 281 N GLU A 274 SHEET 3 G 3 LYS A 285 PRO A 286 -1 O LYS A 285 N LEU A 282 SHEET 1 H 9 PHE A 289 GLY A 293 0 SHEET 2 H 9 SER A 324 ARG A 326 1 N SER A 324 O LYS A 290 SHEET 3 H 9 LEU A 346 GLU A 350 1 O ILE A 348 N PHE A 325 SHEET 4 H 9 VAL A 400 ASN A 407 1 O MET A 402 N ASP A 349 SHEET 5 H 9 VAL A 437 ASN A 441 1 O THR A 438 N TRP A 403 SHEET 6 H 9 VAL A 458 ASN A 462 1 O ASN A 462 N ASN A 441 SHEET 7 H 9 ILE A 497 GLU A 501 1 O ILE A 498 N VAL A 459 SHEET 8 H 9 LEU A 540 VAL A 545 1 O GLN A 544 N ILE A 499 SHEET 9 H 9 PHE A 289 GLY A 293 1 N GLY A 293 O VAL A 545 CISPEP 1 ILE A 40 PRO A 41 0 -3.57 CISPEP 2 THR A 85 HIS A 86 0 2.62 CISPEP 3 LEU A 136 PRO A 137 0 3.11 CISPEP 4 ASP A 148 GLY A 149 0 -3.06 CISPEP 5 SER A 328 HIS A 329 0 -6.90 CISPEP 6 ASP A 370 ASN A 371 0 9.27 CISPEP 7 TRP A 546 ASN A 547 0 5.00 CISPEP 8 LYS A 595 ASN A 596 0 8.82 SITE 1 AC1 2 GLY A 372 TRP A 374 CRYST1 68.814 83.829 199.332 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014532 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011929 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005017 0.00000