HEADER PROTEIN BINDING 15-MAR-13 4JNJ TITLE STRUCTURE BASED ENGINEERING OF STREPTAVIDIN MONOMER WITH A REDUCED TITLE 2 BIOTIN DISSOCIATION RATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: STREPTAVIDIN/RHIZAVIDIN HYBRID; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 12-134; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES AVIDINII; SOURCE 3 ORGANISM_TAXID: 1895; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA BARREL, ENGINEERED STREPTAVIDIN VARIANT, BIOTIN, BIOTIN-BINDING KEYWDS 2 PROTEIN, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR D.DEMONTE,E.J.DRAKE,K.HONG LIM,A.M.GULICK,S.PARK REVDAT 3 16-OCT-24 4JNJ 1 REMARK LINK REVDAT 2 13-NOV-13 4JNJ 1 JRNL REVDAT 1 29-MAY-13 4JNJ 0 JRNL AUTH D.DEMONTE,E.J.DRAKE,K.H.LIM,A.M.GULICK,S.PARK JRNL TITL STRUCTURE-BASED ENGINEERING OF STREPTAVIDIN MONOMER WITH A JRNL TITL 2 REDUCED BIOTIN DISSOCIATION RATE. JRNL REF PROTEINS V. 81 1621 2013 JRNL REFN ISSN 0887-3585 JRNL PMID 23670729 JRNL DOI 10.1002/PROT.24320 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 33023 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1992 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.4175 - 4.5790 0.91 2233 145 0.1951 0.2291 REMARK 3 2 4.5790 - 3.6367 0.94 2206 140 0.1621 0.1983 REMARK 3 3 3.6367 - 3.1776 0.95 2183 147 0.1818 0.2661 REMARK 3 4 3.1776 - 2.8873 0.96 2217 133 0.2058 0.2606 REMARK 3 5 2.8873 - 2.6805 0.97 2202 145 0.2121 0.2686 REMARK 3 6 2.6805 - 2.5226 0.98 2244 136 0.2008 0.2618 REMARK 3 7 2.5226 - 2.3963 0.97 2205 152 0.2048 0.2674 REMARK 3 8 2.3963 - 2.2920 0.98 2224 140 0.2038 0.2657 REMARK 3 9 2.2920 - 2.2038 0.99 2248 141 0.2038 0.2661 REMARK 3 10 2.2038 - 2.1278 0.99 2237 145 0.2066 0.2778 REMARK 3 11 2.1278 - 2.0613 0.99 2240 142 0.2073 0.2632 REMARK 3 12 2.0613 - 2.0024 0.99 2211 152 0.2184 0.2784 REMARK 3 13 2.0024 - 1.9497 0.99 2246 140 0.2412 0.3019 REMARK 3 14 1.9497 - 1.9021 0.94 2135 134 0.2458 0.3357 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3621 REMARK 3 ANGLE : 1.442 4929 REMARK 3 CHIRALITY : 0.095 501 REMARK 3 PLANARITY : 0.004 661 REMARK 3 DIHEDRAL : 16.301 1259 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4JNJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-APR-13. REMARK 100 THE DEPOSITION ID IS D_1000078269. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAY-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97945 REMARK 200 MONOCHROMATOR : CURVED CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34185 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 29.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.71600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18-24% PEG 1000, 40-80 MM ZINC REMARK 280 ACETATE, 100 MM SODIUM ACETATE , PH 5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.55850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.24650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.02900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.24650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.55850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.02900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -88.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 30.55850 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -32.02900 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS B 134 REMARK 465 GLY C 12 REMARK 465 ALA C 13 REMARK 465 GLU C 14 REMARK 465 ALA C 15 REMARK 465 GLY D 12 REMARK 465 ALA D 13 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 72 CG CD CE NZ REMARK 470 GLN A 97 CG CD OE1 NE2 REMARK 470 GLU A 101 CG CD OE1 OE2 REMARK 470 GLN A 107 CG CD OE1 NE2 REMARK 470 LYS A 134 CG CD CE NZ REMARK 470 GLU B 74 CG CD OE1 OE2 REMARK 470 GLN C 107 CG CD OE1 NE2 REMARK 470 LYS C 134 CG CD CE NZ REMARK 470 GLU D 14 CG CD OE1 OE2 REMARK 470 GLU D 44 CG CD OE1 OE2 REMARK 470 LYS D 72 CG CD CE NZ REMARK 470 GLN D 97 CG CD OE1 NE2 REMARK 470 GLN D 127 CG CD OE1 NE2 REMARK 470 LYS D 134 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU D 84 O HOH D 355 1.95 REMARK 500 OE2 GLU B 124 O HOH B 346 1.97 REMARK 500 OE1 GLN B 51 O HOH B 344 2.08 REMARK 500 O HOH A 362 O HOH B 338 2.16 REMARK 500 O HOH A 336 O HOH A 349 2.18 REMARK 500 O ALA D 100 O HOH D 357 2.19 REMARK 500 O HOH D 348 O HOH D 351 2.19 REMARK 500 O HOH D 308 O HOH D 335 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG B 93 O HOH B 301 4445 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 51A -56.60 74.10 REMARK 500 ASN A 61 111.63 -175.79 REMARK 500 ALA A 100 -92.76 48.57 REMARK 500 GLU B 101 51.28 -106.44 REMARK 500 ASN C 51A -31.60 75.59 REMARK 500 ALA C 100 -54.85 68.80 REMARK 500 ALA D 35 -21.83 69.61 REMARK 500 ARG D 46 12.57 -140.19 REMARK 500 ASN D 51A -65.22 63.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 203 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 12 N REMARK 620 2 GLU A 14 OE2 115.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 204 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 36 OD2 REMARK 620 2 HOH A 311 O 112.0 REMARK 620 3 HOH A 364 O 93.7 111.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 87 ND1 REMARK 620 2 GLU A 113 OE2 123.3 REMARK 620 3 HIS C 87 ND1 106.8 108.8 REMARK 620 4 GLU C 113 OE2 112.0 91.9 113.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 204 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY B 12 N REMARK 620 2 GLU B 14 OE2 113.3 REMARK 620 3 HOH B 351 O 117.6 118.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 36 OD2 REMARK 620 2 HOH B 348 O 135.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 203 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 44 OE2 REMARK 620 2 HOH B 349 O 109.2 REMARK 620 3 HOH B 350 O 118.6 100.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 203 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 87 ND1 REMARK 620 2 GLU B 113 OE2 110.1 REMARK 620 3 HIS D 87 ND1 110.5 115.2 REMARK 620 4 GLU D 113 OE2 110.2 88.7 120.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 BTN D 201 O12 REMARK 620 2 HOH D 356 O 156.6 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BTN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BTN B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BTN C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BTN D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 203 DBREF 4JNJ A 12 134 PDB 4JNJ 4JNJ 12 134 DBREF 4JNJ B 12 134 PDB 4JNJ 4JNJ 12 134 DBREF 4JNJ C 12 134 PDB 4JNJ 4JNJ 12 134 DBREF 4JNJ D 12 134 PDB 4JNJ 4JNJ 12 134 SEQRES 1 A 115 GLY ALA GLU ALA GLY ILE THR GLY THR TRP TYR ASN GLN SEQRES 2 A 115 SER GLY SER THR PHE THR VAL THR ALA GLY ALA ASP GLY SEQRES 3 A 115 ASN LEU THR GLY GLN TYR GLU ASN ARG ALA GLN GLY THR SEQRES 4 A 115 GLY CYS GLN ASN SER PRO TYR THR LEU THR GLY ARG TYR SEQRES 5 A 115 ASN GLY THR LYS LEU GLU TRP ARG VAL GLU TRP ASN ASN SEQRES 6 A 115 SER THR GLU ASN CYS HIS SER ARG THR GLU TRP ARG GLY SEQRES 7 A 115 GLN TYR GLN GLY GLY ALA GLU ALA ARG ILE ASN THR GLN SEQRES 8 A 115 TRP ASN LEU THR TYR GLU GLY GLY SER GLY PRO ALA THR SEQRES 9 A 115 GLU GLN GLY GLN ASP THR PHE THR LYS VAL LYS SEQRES 1 B 115 GLY ALA GLU ALA GLY ILE THR GLY THR TRP TYR ASN GLN SEQRES 2 B 115 SER GLY SER THR PHE THR VAL THR ALA GLY ALA ASP GLY SEQRES 3 B 115 ASN LEU THR GLY GLN TYR GLU ASN ARG ALA GLN GLY THR SEQRES 4 B 115 GLY CYS GLN ASN SER PRO TYR THR LEU THR GLY ARG TYR SEQRES 5 B 115 ASN GLY THR LYS LEU GLU TRP ARG VAL GLU TRP ASN ASN SEQRES 6 B 115 SER THR GLU ASN CYS HIS SER ARG THR GLU TRP ARG GLY SEQRES 7 B 115 GLN TYR GLN GLY GLY ALA GLU ALA ARG ILE ASN THR GLN SEQRES 8 B 115 TRP ASN LEU THR TYR GLU GLY GLY SER GLY PRO ALA THR SEQRES 9 B 115 GLU GLN GLY GLN ASP THR PHE THR LYS VAL LYS SEQRES 1 C 115 GLY ALA GLU ALA GLY ILE THR GLY THR TRP TYR ASN GLN SEQRES 2 C 115 SER GLY SER THR PHE THR VAL THR ALA GLY ALA ASP GLY SEQRES 3 C 115 ASN LEU THR GLY GLN TYR GLU ASN ARG ALA GLN GLY THR SEQRES 4 C 115 GLY CYS GLN ASN SER PRO TYR THR LEU THR GLY ARG TYR SEQRES 5 C 115 ASN GLY THR LYS LEU GLU TRP ARG VAL GLU TRP ASN ASN SEQRES 6 C 115 SER THR GLU ASN CYS HIS SER ARG THR GLU TRP ARG GLY SEQRES 7 C 115 GLN TYR GLN GLY GLY ALA GLU ALA ARG ILE ASN THR GLN SEQRES 8 C 115 TRP ASN LEU THR TYR GLU GLY GLY SER GLY PRO ALA THR SEQRES 9 C 115 GLU GLN GLY GLN ASP THR PHE THR LYS VAL LYS SEQRES 1 D 115 GLY ALA GLU ALA GLY ILE THR GLY THR TRP TYR ASN GLN SEQRES 2 D 115 SER GLY SER THR PHE THR VAL THR ALA GLY ALA ASP GLY SEQRES 3 D 115 ASN LEU THR GLY GLN TYR GLU ASN ARG ALA GLN GLY THR SEQRES 4 D 115 GLY CYS GLN ASN SER PRO TYR THR LEU THR GLY ARG TYR SEQRES 5 D 115 ASN GLY THR LYS LEU GLU TRP ARG VAL GLU TRP ASN ASN SEQRES 6 D 115 SER THR GLU ASN CYS HIS SER ARG THR GLU TRP ARG GLY SEQRES 7 D 115 GLN TYR GLN GLY GLY ALA GLU ALA ARG ILE ASN THR GLN SEQRES 8 D 115 TRP ASN LEU THR TYR GLU GLY GLY SER GLY PRO ALA THR SEQRES 9 D 115 GLU GLN GLY GLN ASP THR PHE THR LYS VAL LYS HET BTN A 201 16 HET ZN A 202 1 HET ZN A 203 1 HET ZN A 204 1 HET BTN B 201 16 HET ZN B 202 1 HET ZN B 203 1 HET ZN B 204 1 HET BTN C 201 16 HET ZN C 202 1 HET BTN D 201 16 HET ZN D 202 1 HET ZN D 203 1 HETNAM BTN BIOTIN HETNAM ZN ZINC ION FORMUL 5 BTN 4(C10 H16 N2 O3 S) FORMUL 6 ZN 9(ZN 2+) FORMUL 18 HOH *218(H2 O) HELIX 1 1 GLY A 12 ILE A 17 5 6 HELIX 2 2 ALA B 13 THR B 18 1 6 SHEET 1 A 9 GLY A 19 ASN A 23 0 SHEET 2 A 9 THR A 28 ALA A 33 -1 O PHE A 29 N TRP A 21 SHEET 3 A 9 ASN A 38 GLU A 44 -1 O THR A 40 N THR A 32 SHEET 4 A 9 TYR A 54 ASN A 61 -1 O TYR A 54 N TYR A 43 SHEET 5 A 9 LYS A 72 ASN A 80 -1 O ARG A 76 N THR A 57 SHEET 6 A 9 ASN A 85 GLN A 97 -1 O GLY A 94 N LEU A 73 SHEET 7 A 9 ARG A 103 GLU A 113 -1 O ARG A 103 N GLN A 97 SHEET 8 A 9 PRO A 121 LYS A 132 -1 O GLU A 124 N LEU A 110 SHEET 9 A 9 GLY A 19 ASN A 23 -1 N TYR A 22 O THR A 131 SHEET 1 B 9 GLY B 19 ASN B 23 0 SHEET 2 B 9 THR B 28 ALA B 33 -1 O PHE B 29 N TRP B 21 SHEET 3 B 9 ASN B 38 GLU B 44 -1 O GLU B 44 N THR B 28 SHEET 4 B 9 PRO B 53 ASN B 61 -1 O TYR B 54 N TYR B 43 SHEET 5 B 9 LYS B 72 ASN B 80 -1 O GLU B 74 N ARG B 59 SHEET 6 B 9 ASN B 85 GLN B 97 -1 O CYS B 86 N TRP B 79 SHEET 7 B 9 ARG B 103 GLU B 113 -1 O ARG B 103 N GLN B 97 SHEET 8 B 9 PRO B 121 LYS B 132 -1 O GLU B 124 N LEU B 110 SHEET 9 B 9 GLY B 19 ASN B 23 -1 N TYR B 22 O THR B 131 SHEET 1 C 9 GLY C 19 TYR C 22 0 SHEET 2 C 9 THR C 28 ALA C 33 -1 O PHE C 29 N TRP C 21 SHEET 3 C 9 ASN C 38 GLU C 44 -1 O GLU C 44 N THR C 28 SHEET 4 C 9 PRO C 53 ASN C 61 -1 O TYR C 54 N TYR C 43 SHEET 5 C 9 LYS C 72 ASN C 80 -1 O ARG C 76 N THR C 57 SHEET 6 C 9 ASN C 85 GLY C 98 -1 O GLY C 94 N LEU C 73 SHEET 7 C 9 ALA C 102 GLU C 113 -1 O GLN C 107 N ARG C 93 SHEET 8 C 9 PRO C 121 LYS C 132 -1 O GLU C 124 N LEU C 110 SHEET 9 C 9 GLY C 19 TYR C 22 -1 N TYR C 22 O THR C 131 SHEET 1 D 9 GLY D 19 TYR D 22 0 SHEET 2 D 9 THR D 28 ALA D 33 -1 O PHE D 29 N TRP D 21 SHEET 3 D 9 ASN D 38 GLU D 44 -1 O GLU D 44 N THR D 28 SHEET 4 D 9 TYR D 54 ASN D 61 -1 O TYR D 54 N TYR D 43 SHEET 5 D 9 LYS D 72 ASN D 80 -1 O LYS D 72 N ASN D 61 SHEET 6 D 9 ASN D 85 GLN D 97 -1 O CYS D 86 N TRP D 79 SHEET 7 D 9 ARG D 103 GLU D 113 -1 O ARG D 103 N GLN D 97 SHEET 8 D 9 PRO D 121 LYS D 132 -1 O ALA D 122 N TYR D 112 SHEET 9 D 9 GLY D 19 TYR D 22 -1 N TYR D 22 O THR D 131 SSBOND 1 CYS A 50 CYS A 86 1555 1555 2.04 SSBOND 2 CYS B 50 CYS B 86 1555 1555 2.05 SSBOND 3 CYS C 50 CYS C 86 1555 1555 2.03 SSBOND 4 CYS D 50 CYS D 86 1555 1555 2.01 LINK N GLY A 12 ZN ZN A 203 1555 1555 1.97 LINK OE2 GLU A 14 ZN ZN A 203 1555 1555 1.99 LINK OD2 ASP A 36 ZN ZN A 204 1555 1555 2.30 LINK ND1 HIS A 87 ZN ZN A 202 1555 1555 1.98 LINK OE2 GLU A 113 ZN ZN A 202 1555 1555 2.01 LINK ZN ZN A 202 ND1 HIS C 87 1555 1555 1.92 LINK ZN ZN A 202 OE2 GLU C 113 1555 1555 2.00 LINK ZN ZN A 204 O HOH A 311 1555 1555 2.66 LINK ZN ZN A 204 O HOH A 364 1555 1555 2.44 LINK N GLY B 12 ZN ZN B 204 1555 1555 2.08 LINK OE2 GLU B 14 ZN ZN B 204 1555 1555 1.93 LINK OD2 ASP B 36 ZN ZN B 202 1555 1555 2.07 LINK OE2 GLU B 44 ZN ZN B 203 1555 1555 1.92 LINK ND1 HIS B 87 ZN ZN D 203 1555 1555 1.91 LINK OE2 GLU B 113 ZN ZN D 203 1555 1555 1.97 LINK ZN ZN B 202 O HOH B 348 1555 1555 2.47 LINK ZN ZN B 203 O HOH B 349 1555 1555 1.99 LINK ZN ZN B 203 O HOH B 350 1555 1555 2.12 LINK ZN ZN B 204 O HOH B 351 1555 1555 2.22 LINK ND1 HIS D 87 ZN ZN D 203 1555 1555 2.05 LINK OE2 GLU D 113 ZN ZN D 203 1555 1555 2.06 LINK O12 BTN D 201 ZN ZN D 202 1555 1555 2.69 LINK ZN ZN D 202 O HOH D 356 1555 1555 2.29 SITE 1 AC1 17 ASN A 23 SER A 27 TYR A 43 ASN A 45 SITE 2 AC1 17 ALA A 47 GLY A 49 TRP A 79 CYS A 86 SITE 3 AC1 17 SER A 88 THR A 90 TRP A 108 LEU A 110 SITE 4 AC1 17 ASP A 128 HOH A 308 GLY B 12 GLU B 14 SITE 5 AC1 17 ZN B 204 SITE 1 AC2 4 HIS A 87 GLU A 113 HIS C 87 GLU C 113 SITE 1 AC3 4 GLY A 12 GLU A 14 BTN B 201 HOH B 347 SITE 1 AC4 3 ASP A 36 HOH A 311 HOH A 364 SITE 1 AC5 15 GLY A 12 GLU A 14 ZN A 203 ASN B 23 SITE 2 AC5 15 SER B 27 TYR B 43 ASN B 45 ALA B 47 SITE 3 AC5 15 GLY B 49 TRP B 79 SER B 88 THR B 90 SITE 4 AC5 15 TRP B 92 TRP B 108 ASP B 128 SITE 1 AC6 3 ASP B 36 ASN B 38 HOH B 348 SITE 1 AC7 4 GLU B 44 HOH B 349 HOH B 350 ASP D 36 SITE 1 AC8 4 BTN A 201 GLY B 12 GLU B 14 HOH B 351 SITE 1 AC9 12 ASN C 23 SER C 27 TYR C 43 ASN C 45 SITE 2 AC9 12 ALA C 47 GLY C 49 TRP C 79 SER C 88 SITE 3 AC9 12 THR C 90 TRP C 108 ASP C 128 ZN C 202 SITE 1 BC1 1 BTN C 201 SITE 1 BC2 15 ASN D 23 SER D 27 TYR D 43 ASN D 45 SITE 2 BC2 15 ALA D 47 THR D 48 GLY D 49 TRP D 79 SITE 3 BC2 15 CYS D 86 SER D 88 THR D 90 TRP D 108 SITE 4 BC2 15 LEU D 110 ASP D 128 ZN D 202 SITE 1 BC3 2 BTN D 201 HOH D 356 SITE 1 BC4 4 HIS B 87 GLU B 113 HIS D 87 GLU D 113 CRYST1 61.117 64.058 108.493 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016362 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015611 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009217 0.00000 CONECT 1 3489 CONECT 18 3489 CONECT 173 3490 CONECT 288 527 CONECT 527 288 CONECT 534 3488 CONECT 745 3488 CONECT 869 3509 CONECT 886 3509 CONECT 1041 3507 CONECT 1110 3508 CONECT 1164 1403 CONECT 1403 1164 CONECT 1410 3544 CONECT 1633 3544 CONECT 2024 2267 CONECT 2267 2024 CONECT 2274 3488 CONECT 2493 3488 CONECT 2887 3126 CONECT 3126 2887 CONECT 3133 3544 CONECT 3352 3544 CONECT 3472 3473 3474 3475 CONECT 3473 3472 CONECT 3474 3472 CONECT 3475 3472 3476 CONECT 3476 3475 3477 CONECT 3477 3476 3478 CONECT 3478 3477 3479 CONECT 3479 3478 3480 3487 CONECT 3480 3479 3481 CONECT 3481 3480 3482 CONECT 3482 3481 3483 3487 CONECT 3483 3482 3484 CONECT 3484 3483 3485 3486 CONECT 3485 3484 CONECT 3486 3484 3487 CONECT 3487 3479 3482 3486 CONECT 3488 534 745 2274 2493 CONECT 3489 1 18 CONECT 3490 173 3555 3608 CONECT 3491 3492 3493 3494 CONECT 3492 3491 CONECT 3493 3491 CONECT 3494 3491 3495 CONECT 3495 3494 3496 CONECT 3496 3495 3497 CONECT 3497 3496 3498 CONECT 3498 3497 3499 3506 CONECT 3499 3498 3500 CONECT 3500 3499 3501 CONECT 3501 3500 3502 3506 CONECT 3502 3501 3503 CONECT 3503 3502 3504 3505 CONECT 3504 3503 CONECT 3505 3503 3506 CONECT 3506 3498 3501 3505 CONECT 3507 1041 3664 CONECT 3508 1110 3665 3666 CONECT 3509 869 886 3667 CONECT 3510 3511 3512 3513 CONECT 3511 3510 CONECT 3512 3510 CONECT 3513 3510 3514 CONECT 3514 3513 3515 CONECT 3515 3514 3516 CONECT 3516 3515 3517 CONECT 3517 3516 3518 3525 CONECT 3518 3517 3519 CONECT 3519 3518 3520 CONECT 3520 3519 3521 3525 CONECT 3521 3520 3522 CONECT 3522 3521 3523 3524 CONECT 3523 3522 CONECT 3524 3522 3525 CONECT 3525 3517 3520 3524 CONECT 3527 3528 3529 3530 CONECT 3528 3527 CONECT 3529 3527 3543 CONECT 3530 3527 3531 CONECT 3531 3530 3532 CONECT 3532 3531 3533 CONECT 3533 3532 3534 CONECT 3534 3533 3535 3542 CONECT 3535 3534 3536 CONECT 3536 3535 3537 CONECT 3537 3536 3538 3542 CONECT 3538 3537 3539 CONECT 3539 3538 3540 3541 CONECT 3540 3539 CONECT 3541 3539 3542 CONECT 3542 3534 3537 3541 CONECT 3543 3529 3760 CONECT 3544 1410 1633 3133 3352 CONECT 3555 3490 CONECT 3608 3490 CONECT 3664 3507 CONECT 3665 3508 CONECT 3666 3508 CONECT 3667 3509 CONECT 3760 3543 MASTER 455 0 13 2 36 0 25 6 3742 4 102 36 END