HEADER TRANSFERASE 19-MAR-13 4JPF TITLE STRUCTURE OF WILD TYPE PSEUDOMONAS AERUGINOSA FABF (KASII) IN COMPLEX TITLE 2 WITH LIGAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 2; COMPND 3 CHAIN: A; COMPND 4 EC: 2.3.1.179; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228; SOURCE 5 GENE: FABF, FABF1, PA2965; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC-BSA4 KEYWDS FATTY ACID BIOSYNTHESIS, FABF, KASII, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR B.BAUM,R.BRENK,E.JAENICKE REVDAT 6 20-SEP-23 4JPF 1 REMARK SEQADV LINK REVDAT 5 15-NOV-17 4JPF 1 REMARK REVDAT 4 26-AUG-15 4JPF 1 JRNL REVDAT 3 12-AUG-15 4JPF 1 JRNL REVDAT 2 29-APR-15 4JPF 1 TITLE HEADER KEYWDS REVDAT 1 02-APR-14 4JPF 0 JRNL AUTH B.BAUM,L.S.LECKER,M.ZOLTNER,E.JAENICKE,R.SCHNELL,W.N.HUNTER, JRNL AUTH 2 R.BRENK JRNL TITL STRUCTURES OF PSEUDOMONAS AERUGINOSA JRNL TITL 2 BETA-KETOACYL-(ACYL-CARRIER-PROTEIN) SYNTHASE II (FABF) AND JRNL TITL 3 A C164Q MUTANT PROVIDE TEMPLATES FOR ANTIBACTERIAL DRUG JRNL TITL 4 DISCOVERY AND IDENTIFY A BURIED POTASSIUM ION AND A JRNL TITL 5 LIGAND-BINDING SITE THAT IS AN ARTEFACT OF THE CRYSTAL FORM. JRNL REF ACTA CRYSTALLOGR F STRUCT V. 71 1020 2015 JRNL REF 2 BIOL COMMUN JRNL REFN ESSN 1744-3091 JRNL PMID 26249693 JRNL DOI 10.1107/S2053230X15010614 REMARK 2 REMARK 2 RESOLUTION. 1.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.41 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 40931 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2155 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.67 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.71 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2815 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.12 REMARK 3 BIN R VALUE (WORKING SET) : 0.5330 REMARK 3 BIN FREE R VALUE SET COUNT : 148 REMARK 3 BIN FREE R VALUE : 0.4890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3028 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 371 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.02000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : -0.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.102 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.099 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.064 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.950 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3111 ; 0.021 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2933 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4208 ; 1.957 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6726 ; 0.945 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 414 ; 6.755 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 132 ;38.171 ;22.803 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 486 ;12.592 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 29 ;19.581 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 461 ; 0.124 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3639 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 731 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4JPF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000078337. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR-H REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43280 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.670 REMARK 200 RESOLUTION RANGE LOW (A) : 28.410 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.77 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.150 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4B7V, MONOMERA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM CHLORIDE, 0.1 M TRIS, REMARK 280 10% (W/V) PEG8000, 5 MM F24, 5% DMSO, PH 7.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.01500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 35.80000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 35.80000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 105.02250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 35.80000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 35.80000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 35.00750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 35.80000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.80000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 105.02250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 35.80000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.80000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 35.00750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 70.01500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -71.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -70.01500 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 816 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASP A 414 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 60 O HOH A 961 1.90 REMARK 500 OE1 GLU A 60 O HOH A 603 2.17 REMARK 500 O HOH A 744 O HOH A 908 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 13 CA - CB - CG ANGL. DEV. = 10.4 DEGREES REMARK 500 ASP A 276 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ARG A 282 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 ARG A 388 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG A 388 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 125 -42.12 -131.19 REMARK 500 ALA A 163 -128.63 49.31 REMARK 500 TRP A 223 -0.73 75.62 REMARK 500 ASP A 228 33.13 -149.25 REMARK 500 PHE A 268 -55.81 -122.50 REMARK 500 SER A 307 41.19 78.01 REMARK 500 LEU A 343 -112.04 58.04 REMARK 500 HIS A 383 -44.30 79.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 503 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 302 OD1 REMARK 620 2 ASN A 302 O 71.9 REMARK 620 3 ALA A 303 O 73.1 70.6 REMARK 620 4 GLU A 350 OE1 85.1 152.3 88.3 REMARK 620 5 SER A 395 OG 92.5 86.4 155.6 110.4 REMARK 620 6 ASN A 396 O 160.6 94.0 89.9 104.0 100.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 1LR A 501 OAH REMARK 620 2 HOH A 946 O 96.0 REMARK 620 3 HOH A 947 O 91.8 86.9 REMARK 620 4 HOH A 948 O 86.7 91.0 177.3 REMARK 620 5 HOH A 949 O 175.1 88.9 87.9 93.8 REMARK 620 6 HOH A 950 O 95.7 166.3 85.8 96.6 79.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1LR A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4B7V RELATED DB: PDB REMARK 900 RELATED ID: 4JB6 RELATED DB: PDB DBREF 4JPF A 1 414 UNP G3XDA2 G3XDA2_PSEAE 1 414 SEQADV 4JPF MET A -21 UNP G3XDA2 EXPRESSION TAG SEQADV 4JPF HIS A -20 UNP G3XDA2 EXPRESSION TAG SEQADV 4JPF HIS A -19 UNP G3XDA2 EXPRESSION TAG SEQADV 4JPF HIS A -18 UNP G3XDA2 EXPRESSION TAG SEQADV 4JPF HIS A -17 UNP G3XDA2 EXPRESSION TAG SEQADV 4JPF HIS A -16 UNP G3XDA2 EXPRESSION TAG SEQADV 4JPF HIS A -15 UNP G3XDA2 EXPRESSION TAG SEQADV 4JPF SER A -14 UNP G3XDA2 EXPRESSION TAG SEQADV 4JPF SER A -13 UNP G3XDA2 EXPRESSION TAG SEQADV 4JPF GLY A -12 UNP G3XDA2 EXPRESSION TAG SEQADV 4JPF VAL A -11 UNP G3XDA2 EXPRESSION TAG SEQADV 4JPF ASP A -10 UNP G3XDA2 EXPRESSION TAG SEQADV 4JPF LEU A -9 UNP G3XDA2 EXPRESSION TAG SEQADV 4JPF GLY A -8 UNP G3XDA2 EXPRESSION TAG SEQADV 4JPF THR A -7 UNP G3XDA2 EXPRESSION TAG SEQADV 4JPF GLU A -6 UNP G3XDA2 EXPRESSION TAG SEQADV 4JPF ASN A -5 UNP G3XDA2 EXPRESSION TAG SEQADV 4JPF LEU A -4 UNP G3XDA2 EXPRESSION TAG SEQADV 4JPF TYR A -3 UNP G3XDA2 EXPRESSION TAG SEQADV 4JPF PHE A -2 UNP G3XDA2 EXPRESSION TAG SEQADV 4JPF GLN A -1 UNP G3XDA2 EXPRESSION TAG SEQADV 4JPF SER A 0 UNP G3XDA2 EXPRESSION TAG SEQRES 1 A 436 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 436 GLY THR GLU ASN LEU TYR PHE GLN SER MET SER ARG ARG SEQRES 3 A 436 ARG VAL VAL ILE THR GLY MET GLY MET LEU SER PRO LEU SEQRES 4 A 436 GLY LEU ASP VAL PRO SER SER TRP GLU GLY ILE LEU ALA SEQRES 5 A 436 GLY ARG SER GLY ILE ALA PRO ILE GLU HIS MET ASP LEU SEQRES 6 A 436 SER ALA TYR SER THR ARG PHE GLY GLY SER VAL LYS GLY SEQRES 7 A 436 PHE ASN VAL GLU GLU TYR LEU SER ALA LYS GLU ALA ARG SEQRES 8 A 436 LYS LEU ASP LEU PHE ILE GLN TYR GLY LEU ALA ALA SER SEQRES 9 A 436 PHE GLN ALA VAL ARG ASP SER GLY LEU GLU VAL THR ASP SEQRES 10 A 436 ALA ASN ARG GLU ARG ILE GLY VAL SER MET GLY SER GLY SEQRES 11 A 436 ILE GLY GLY LEU THR ASN ILE GLU ASN ASN CYS ARG SER SEQRES 12 A 436 LEU PHE GLU GLN GLY PRO ARG ARG ILE SER PRO PHE PHE SEQRES 13 A 436 VAL PRO GLY SER ILE ILE ASN MET VAL SER GLY PHE LEU SEQRES 14 A 436 SER ILE HIS LEU GLY LEU GLN GLY PRO ASN TYR ALA LEU SEQRES 15 A 436 THR THR ALA CYS THR THR GLY THR HIS SER ILE GLY MET SEQRES 16 A 436 ALA ALA ARG ASN ILE ALA TYR GLY GLU ALA ASP VAL MET SEQRES 17 A 436 VAL ALA GLY GLY SER GLU MET ALA ALA CYS GLY LEU GLY SEQRES 18 A 436 LEU GLY GLY PHE GLY ALA ALA ARG ALA LEU SER THR ARG SEQRES 19 A 436 ASN ASP GLU PRO THR ARG ALA SER ARG PRO TRP ASP ARG SEQRES 20 A 436 ASP ARG ASP GLY PHE VAL LEU SER ASP GLY SER GLY ALA SEQRES 21 A 436 LEU VAL LEU GLU GLU LEU GLU HIS ALA ARG ALA ARG GLY SEQRES 22 A 436 ALA ARG ILE TYR ALA GLU LEU VAL GLY PHE GLY MET SER SEQRES 23 A 436 GLY ASP ALA PHE HIS MET THR ALA PRO PRO GLU ASP GLY SEQRES 24 A 436 ALA GLY ALA ALA ARG CYS MET LYS ASN ALA LEU ARG ASP SEQRES 25 A 436 ALA GLY LEU ASP PRO ARG GLN VAL ASP TYR ILE ASN ALA SEQRES 26 A 436 HIS GLY THR SER THR PRO ALA GLY ASP ILE ALA GLU ILE SEQRES 27 A 436 ALA ALA VAL LYS SER VAL PHE GLY GLU HIS ALA HIS ALA SEQRES 28 A 436 LEU SER MET SER SER THR LYS SER MET THR GLY HIS LEU SEQRES 29 A 436 LEU GLY ALA ALA GLY ALA VAL GLU ALA ILE PHE SER VAL SEQRES 30 A 436 LEU ALA LEU ARG ASP GLN VAL ALA PRO PRO THR ILE ASN SEQRES 31 A 436 LEU ASP ASN PRO ASP GLU GLY CYS ASP LEU ASP LEU VAL SEQRES 32 A 436 ALA HIS GLU ALA LYS PRO ARG LYS ILE ASP VAL ALA LEU SEQRES 33 A 436 SER ASN SER PHE GLY PHE GLY GLY THR ASN GLY THR LEU SEQRES 34 A 436 VAL PHE ARG ARG PHE ALA ASP HET 1LR A 501 19 HET MG A 502 1 HET K A 503 1 HETNAM 1LR 3-(BENZOYLAMINO)-2-HYDROXYBENZOIC ACID HETNAM MG MAGNESIUM ION HETNAM K POTASSIUM ION FORMUL 2 1LR C14 H11 N O4 FORMUL 3 MG MG 2+ FORMUL 4 K K 1+ FORMUL 5 HOH *371(H2 O) HELIX 1 1 ASP A 20 GLY A 31 1 12 HELIX 2 2 ASN A 58 TYR A 62 5 5 HELIX 3 3 SER A 64 ARG A 69 1 6 HELIX 4 4 ASP A 72 GLY A 90 1 19 HELIX 5 5 ASN A 97 GLU A 99 5 3 HELIX 6 6 GLY A 111 GLN A 125 1 15 HELIX 7 7 GLY A 126 ILE A 130 5 5 HELIX 8 8 ASN A 141 GLY A 152 1 12 HELIX 9 9 THR A 162 CYS A 164 5 3 HELIX 10 10 THR A 165 TYR A 180 1 16 HELIX 11 11 CYS A 196 ALA A 206 1 11 HELIX 12 12 GLU A 215 ALA A 219 5 5 HELIX 13 13 LEU A 244 ARG A 250 1 7 HELIX 14 14 GLY A 277 GLY A 292 1 16 HELIX 15 15 ASP A 294 VAL A 298 5 5 HELIX 16 16 THR A 308 GLY A 324 1 17 HELIX 17 17 GLU A 325 ALA A 329 5 5 HELIX 18 18 THR A 335 GLY A 340 1 6 HELIX 19 19 LEU A 342 GLY A 344 5 3 HELIX 20 20 ALA A 345 GLN A 361 1 17 SHEET 1 A10 ASN A 157 TYR A 158 0 SHEET 2 A10 ILE A 101 GLY A 106 1 N VAL A 103 O TYR A 158 SHEET 3 A10 VAL A 185 GLU A 192 1 O VAL A 187 N SER A 104 SHEET 4 A10 GLY A 235 GLU A 243 -1 O LEU A 241 N MET A 186 SHEET 5 A10 VAL A 6 LEU A 14 -1 N GLY A 10 O VAL A 240 SHEET 6 A10 ALA A 256 GLY A 265 -1 O ALA A 256 N ILE A 8 SHEET 7 A10 THR A 403 ARG A 410 -1 O THR A 406 N GLY A 262 SHEET 8 A10 VAL A 392 GLY A 399 -1 N ALA A 393 O PHE A 409 SHEET 9 A10 TYR A 300 ASN A 302 1 N ASN A 302 O LEU A 394 SHEET 10 A10 SER A 331 SER A 333 1 O SER A 333 N ILE A 301 SHEET 1 B 2 ALA A 36 PRO A 37 0 SHEET 2 B 2 PHE A 50 GLY A 51 -1 O GLY A 51 N ALA A 36 SHEET 1 C 2 VAL A 362 ALA A 363 0 SHEET 2 C 2 LYS A 386 PRO A 387 -1 O LYS A 386 N ALA A 363 LINK OD1 ASN A 302 K K A 503 1555 1555 2.76 LINK O ASN A 302 K K A 503 1555 1555 2.84 LINK O ALA A 303 K K A 503 1555 1555 2.97 LINK OE1 GLU A 350 K K A 503 1555 1555 2.72 LINK OG SER A 395 K K A 503 1555 1555 2.88 LINK O ASN A 396 K K A 503 1555 1555 2.68 LINK OAH 1LR A 501 MG MG A 502 1555 1555 2.11 LINK MG MG A 502 O HOH A 946 1555 1555 2.10 LINK MG MG A 502 O HOH A 947 1555 1555 2.17 LINK MG MG A 502 O HOH A 948 1555 1555 2.11 LINK MG MG A 502 O HOH A 949 1555 1555 2.24 LINK MG MG A 502 O HOH A 950 1555 1555 2.17 SITE 1 AC1 13 GLU A 61 TYR A 62 PHE A 83 VAL A 86 SITE 2 AC1 13 ARG A 87 ARG A 128 ARG A 129 LEU A 151 SITE 3 AC1 13 ARG A 207 MG A 502 HOH A 895 HOH A 947 SITE 4 AC1 13 HOH A 948 SITE 1 AC2 6 1LR A 501 HOH A 946 HOH A 947 HOH A 948 SITE 2 AC2 6 HOH A 949 HOH A 950 SITE 1 AC3 5 ASN A 302 ALA A 303 GLU A 350 SER A 395 SITE 2 AC3 5 ASN A 396 CRYST1 71.600 71.600 140.030 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013966 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013966 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007141 0.00000