HEADER CHAPERONE/INHIBITOR 20-MAR-13 4JQL TITLE SYNTHESIS OF BENZOQUINONE-ANSAMYCIN-INSPIRED MACROCYCLIC LACTAMS FROM TITLE 2 SHIKIMIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEAT SHOCK PROTEIN HSP 90-ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HEAT SHOCK 86 KDA, HSP 86, HSP86, RENAL CARCINOMA ANTIGEN COMPND 5 NY-REN-38; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HSP90AA1, HSP90A, HSPC1, HSPCA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS INHIBITOR DESIGN, HSP90, NUCLEOTIDE BINDING DOMAIN, CHAPERONE, KEYWDS 2 GELDANAMYCIN, CYTOSOLE, CHAPERONE-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR V.JESO,S.IQBAL,P.HERNANDEZ,M.D.CAMERON,H.PARK,P.V.LOGRASSO, AUTHOR 2 G.C.MICALIZIO REVDAT 4 28-FEB-24 4JQL 1 REMARK SEQADV LINK REVDAT 3 22-MAY-13 4JQL 1 JRNL REVDAT 2 24-APR-13 4JQL 1 JRNL REVDAT 1 10-APR-13 4JQL 0 JRNL AUTH V.JESO,S.IQBAL,P.HERNANDEZ,M.D.CAMERON,H.PARK,P.V.LOGRASSO, JRNL AUTH 2 G.C.MICALIZIO JRNL TITL SYNTHESIS OF BENZOQUINONE ANSAMYCIN-INSPIRED MACROCYCLIC JRNL TITL 2 LACTAMS FROM SHIKIMIC ACID. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 52 4800 2013 JRNL REFN ISSN 1433-7851 JRNL PMID 23554224 JRNL DOI 10.1002/ANIE.201301323 REMARK 2 REMARK 2 RESOLUTION. 1.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 24483 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.910 REMARK 3 FREE R VALUE TEST SET COUNT : 1203 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.9285 - 3.5764 0.98 2631 136 0.1617 0.1764 REMARK 3 2 3.5764 - 2.8392 0.99 2591 138 0.1613 0.1946 REMARK 3 3 2.8392 - 2.4804 0.99 2580 132 0.1688 0.1800 REMARK 3 4 2.4804 - 2.2537 1.00 2599 131 0.1660 0.2049 REMARK 3 5 2.2537 - 2.0922 1.00 2591 136 0.1581 0.1838 REMARK 3 6 2.0922 - 1.9689 1.00 2575 130 0.1706 0.2080 REMARK 3 7 1.9689 - 1.8703 1.00 2569 128 0.1800 0.2583 REMARK 3 8 1.8703 - 1.7889 1.00 2573 139 0.1994 0.2306 REMARK 3 9 1.7889 - 1.7200 0.99 2571 133 0.2121 0.2477 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.750 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1791 REMARK 3 ANGLE : 1.107 2422 REMARK 3 CHIRALITY : 0.080 275 REMARK 3 PLANARITY : 0.004 309 REMARK 3 DIHEDRAL : 14.893 675 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 10 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.7075 -4.4449 77.2389 REMARK 3 T TENSOR REMARK 3 T11: 0.1408 T22: 0.1649 REMARK 3 T33: 0.2594 T12: -0.0418 REMARK 3 T13: 0.0374 T23: -0.0122 REMARK 3 L TENSOR REMARK 3 L11: 2.0427 L22: 0.9669 REMARK 3 L33: 9.0260 L12: -1.0849 REMARK 3 L13: 1.9388 L23: -1.0076 REMARK 3 S TENSOR REMARK 3 S11: -0.2810 S12: -0.1605 S13: -0.1662 REMARK 3 S21: 0.1370 S22: 0.3403 S23: -0.0121 REMARK 3 S31: -0.5263 S32: -0.7321 S33: 0.0385 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 24 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.6267 -8.8115 52.4480 REMARK 3 T TENSOR REMARK 3 T11: 0.2044 T22: 0.1650 REMARK 3 T33: 0.2380 T12: 0.0312 REMARK 3 T13: 0.0027 T23: -0.0953 REMARK 3 L TENSOR REMARK 3 L11: 5.6184 L22: 0.9872 REMARK 3 L33: 2.8277 L12: 1.8017 REMARK 3 L13: -2.0677 L23: -1.0268 REMARK 3 S TENSOR REMARK 3 S11: -0.0582 S12: 0.4182 S13: -0.7073 REMARK 3 S21: -0.2621 S22: -0.1824 S23: 0.0485 REMARK 3 S31: 0.3041 S32: -0.0916 S33: 0.1379 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 41 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.3920 13.0478 55.3191 REMARK 3 T TENSOR REMARK 3 T11: 0.1433 T22: 0.1470 REMARK 3 T33: 0.0982 T12: -0.0059 REMARK 3 T13: -0.0347 T23: 0.0265 REMARK 3 L TENSOR REMARK 3 L11: 4.8435 L22: 5.6002 REMARK 3 L33: 1.9652 L12: -3.6894 REMARK 3 L13: -0.3146 L23: 1.2831 REMARK 3 S TENSOR REMARK 3 S11: -0.0979 S12: 0.3395 S13: -0.0205 REMARK 3 S21: 0.0247 S22: -0.1554 S23: 0.3633 REMARK 3 S31: -0.0884 S32: -0.2302 S33: 0.1884 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 66 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.1746 14.5962 65.7575 REMARK 3 T TENSOR REMARK 3 T11: 0.1501 T22: 0.0947 REMARK 3 T33: 0.0988 T12: -0.0096 REMARK 3 T13: -0.0069 T23: -0.0153 REMARK 3 L TENSOR REMARK 3 L11: 4.3493 L22: 2.6701 REMARK 3 L33: 1.7881 L12: -1.5192 REMARK 3 L13: -0.4184 L23: 0.2876 REMARK 3 S TENSOR REMARK 3 S11: -0.0798 S12: -0.1429 S13: 0.3398 REMARK 3 S21: 0.2650 S22: 0.0183 S23: -0.0550 REMARK 3 S31: -0.1621 S32: -0.0196 S33: 0.0559 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 94 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.8923 6.1478 64.7099 REMARK 3 T TENSOR REMARK 3 T11: 0.1020 T22: 0.1835 REMARK 3 T33: 0.1554 T12: 0.0061 REMARK 3 T13: -0.0052 T23: -0.0175 REMARK 3 L TENSOR REMARK 3 L11: 3.5919 L22: 8.1814 REMARK 3 L33: 0.8768 L12: 3.4005 REMARK 3 L13: -1.3077 L23: -1.8189 REMARK 3 S TENSOR REMARK 3 S11: 0.1096 S12: -0.0351 S13: 0.1413 REMARK 3 S21: 0.2365 S22: -0.0820 S23: 0.6460 REMARK 3 S31: -0.0580 S32: -0.1324 S33: -0.0378 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 107 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.9964 -6.4015 49.3066 REMARK 3 T TENSOR REMARK 3 T11: 0.3550 T22: 0.4051 REMARK 3 T33: 0.3494 T12: 0.0202 REMARK 3 T13: -0.0973 T23: -0.1719 REMARK 3 L TENSOR REMARK 3 L11: 1.9375 L22: 3.0045 REMARK 3 L33: 4.7259 L12: 0.4962 REMARK 3 L13: -1.6179 L23: -0.4290 REMARK 3 S TENSOR REMARK 3 S11: 0.2031 S12: 0.3020 S13: -0.1881 REMARK 3 S21: -0.7393 S22: 0.0851 S23: 0.0941 REMARK 3 S31: 0.4846 S32: -0.0132 S33: -0.1478 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 125 THROUGH 136 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.2179 -0.2619 45.2680 REMARK 3 T TENSOR REMARK 3 T11: 0.4215 T22: 0.3943 REMARK 3 T33: 0.2300 T12: 0.1171 REMARK 3 T13: -0.0984 T23: -0.1026 REMARK 3 L TENSOR REMARK 3 L11: 5.8610 L22: 2.5288 REMARK 3 L33: 4.7064 L12: 2.7420 REMARK 3 L13: 0.8427 L23: -1.1914 REMARK 3 S TENSOR REMARK 3 S11: -0.0677 S12: 1.1176 S13: -0.3915 REMARK 3 S21: -1.0698 S22: -0.1546 S23: 0.1952 REMARK 3 S31: 0.3259 S32: 0.9996 S33: 0.0741 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 137 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.2609 1.8472 65.4887 REMARK 3 T TENSOR REMARK 3 T11: 0.0898 T22: 0.0988 REMARK 3 T33: 0.1151 T12: -0.0172 REMARK 3 T13: -0.0050 T23: -0.0012 REMARK 3 L TENSOR REMARK 3 L11: 2.1253 L22: 2.9307 REMARK 3 L33: 1.4594 L12: -1.3086 REMARK 3 L13: -0.2572 L23: 0.4796 REMARK 3 S TENSOR REMARK 3 S11: -0.1027 S12: -0.0555 S13: -0.2606 REMARK 3 S21: 0.1729 S22: 0.0090 S23: 0.2977 REMARK 3 S31: 0.1101 S32: -0.0952 S33: 0.1139 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 169 THROUGH 182 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.8507 5.0723 72.8989 REMARK 3 T TENSOR REMARK 3 T11: 0.1602 T22: 0.1509 REMARK 3 T33: 0.1136 T12: -0.0065 REMARK 3 T13: 0.0134 T23: -0.0094 REMARK 3 L TENSOR REMARK 3 L11: 1.9299 L22: 4.6294 REMARK 3 L33: 1.1153 L12: -0.2338 REMARK 3 L13: 0.2814 L23: -1.0453 REMARK 3 S TENSOR REMARK 3 S11: -0.0978 S12: -0.3004 S13: -0.1158 REMARK 3 S21: 0.3895 S22: 0.0133 S23: -0.3681 REMARK 3 S31: -0.1903 S32: -0.0585 S33: 0.0828 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 183 THROUGH 210 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.3788 5.9210 57.7327 REMARK 3 T TENSOR REMARK 3 T11: 0.0875 T22: 0.1260 REMARK 3 T33: 0.0825 T12: -0.0190 REMARK 3 T13: -0.0012 T23: -0.0066 REMARK 3 L TENSOR REMARK 3 L11: 3.6297 L22: 2.3141 REMARK 3 L33: 2.3914 L12: -0.5155 REMARK 3 L13: -0.6345 L23: -0.1855 REMARK 3 S TENSOR REMARK 3 S11: 0.0050 S12: 0.1565 S13: 0.0154 REMARK 3 S21: -0.1829 S22: -0.0510 S23: -0.2042 REMARK 3 S31: -0.0485 S32: 0.3338 S33: 0.0312 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 211 THROUGH 224 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.8596 17.3178 57.7335 REMARK 3 T TENSOR REMARK 3 T11: 0.1539 T22: 0.1539 REMARK 3 T33: 0.1508 T12: -0.0277 REMARK 3 T13: 0.0406 T23: 0.0289 REMARK 3 L TENSOR REMARK 3 L11: 4.1210 L22: 4.3596 REMARK 3 L33: 3.0165 L12: -1.6090 REMARK 3 L13: 0.0374 L23: 0.0690 REMARK 3 S TENSOR REMARK 3 S11: -0.0168 S12: 0.7677 S13: 0.2727 REMARK 3 S21: -0.2440 S22: 0.0636 S23: -0.0598 REMARK 3 S31: -0.2481 S32: 0.3373 S33: -0.0623 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4JQL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000078379. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-DEC-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24793 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.720 REMARK 200 RESOLUTION RANGE LOW (A) : 32.922 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS HCL, 0.2 M MGCL2, 30% REMARK 280 PEG4000, PH 8.5, VAPOR DIFFUSION, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 22.24500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 ASP A 9 REMARK 465 GLU A 225 REMARK 465 ARG A 226 REMARK 465 ASP A 227 REMARK 465 LYS A 228 REMARK 465 GLU A 229 REMARK 465 VAL A 230 REMARK 465 SER A 231 REMARK 465 ASP A 232 REMARK 465 ASP A 233 REMARK 465 GLU A 234 REMARK 465 ALA A 235 REMARK 465 GLU A 236 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 10 CG CD OE1 NE2 REMARK 470 LYS A 74 CG CD CE NZ REMARK 470 LYS A 224 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 637 O HOH A 640 1.87 REMARK 500 O HOH A 612 O HOH A 613 1.87 REMARK 500 O HOH A 631 O HOH A 633 1.92 REMARK 500 NZ LYS A 112 O HOH A 622 1.93 REMARK 500 O HOH A 621 O HOH A 626 1.96 REMARK 500 O HOH A 518 O HOH A 557 1.98 REMARK 500 OE2 GLU A 120 O HOH A 581 2.10 REMARK 500 NE2 GLN A 85 O HOH A 599 2.10 REMARK 500 O HOH A 476 O HOH A 588 2.11 REMARK 500 O HOH A 591 O HOH A 654 2.13 REMARK 500 O HOH A 502 O HOH A 560 2.17 REMARK 500 O HOH A 617 O HOH A 674 2.18 REMARK 500 O HOH A 575 O HOH A 625 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 123 31.32 -66.98 REMARK 500 ALA A 166 -145.93 66.79 REMARK 500 ARG A 182 142.49 -170.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 54 OD2 REMARK 620 2 HOH A 444 O 83.2 REMARK 620 3 HOH A 494 O 87.7 96.1 REMARK 620 4 HOH A 598 O 89.7 90.1 173.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VJ6 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 302 DBREF 4JQL A 9 236 UNP P07900 HS90A_HUMAN 9 236 SEQADV 4JQL MET A -20 UNP P07900 EXPRESSION TAG SEQADV 4JQL GLY A -19 UNP P07900 EXPRESSION TAG SEQADV 4JQL SER A -18 UNP P07900 EXPRESSION TAG SEQADV 4JQL SER A -17 UNP P07900 EXPRESSION TAG SEQADV 4JQL HIS A -16 UNP P07900 EXPRESSION TAG SEQADV 4JQL HIS A -15 UNP P07900 EXPRESSION TAG SEQADV 4JQL HIS A -14 UNP P07900 EXPRESSION TAG SEQADV 4JQL HIS A -13 UNP P07900 EXPRESSION TAG SEQADV 4JQL HIS A -12 UNP P07900 EXPRESSION TAG SEQADV 4JQL HIS A -11 UNP P07900 EXPRESSION TAG SEQADV 4JQL SER A -10 UNP P07900 EXPRESSION TAG SEQADV 4JQL SER A -9 UNP P07900 EXPRESSION TAG SEQADV 4JQL GLY A -8 UNP P07900 EXPRESSION TAG SEQADV 4JQL LEU A -7 UNP P07900 EXPRESSION TAG SEQADV 4JQL VAL A -6 UNP P07900 EXPRESSION TAG SEQADV 4JQL PRO A -5 UNP P07900 EXPRESSION TAG SEQADV 4JQL ARG A -4 UNP P07900 EXPRESSION TAG SEQADV 4JQL GLY A -3 UNP P07900 EXPRESSION TAG SEQADV 4JQL SER A -2 UNP P07900 EXPRESSION TAG SEQADV 4JQL HIS A -1 UNP P07900 EXPRESSION TAG SEQADV 4JQL MET A 0 UNP P07900 EXPRESSION TAG SEQRES 1 A 249 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 249 LEU VAL PRO ARG GLY SER HIS MET ASP GLN PRO MET GLU SEQRES 3 A 249 GLU GLU GLU VAL GLU THR PHE ALA PHE GLN ALA GLU ILE SEQRES 4 A 249 ALA GLN LEU MET SER LEU ILE ILE ASN THR PHE TYR SER SEQRES 5 A 249 ASN LYS GLU ILE PHE LEU ARG GLU LEU ILE SER ASN SER SEQRES 6 A 249 SER ASP ALA LEU ASP LYS ILE ARG TYR GLU SER LEU THR SEQRES 7 A 249 ASP PRO SER LYS LEU ASP SER GLY LYS GLU LEU HIS ILE SEQRES 8 A 249 ASN LEU ILE PRO ASN LYS GLN ASP ARG THR LEU THR ILE SEQRES 9 A 249 VAL ASP THR GLY ILE GLY MET THR LYS ALA ASP LEU ILE SEQRES 10 A 249 ASN ASN LEU GLY THR ILE ALA LYS SER GLY THR LYS ALA SEQRES 11 A 249 PHE MET GLU ALA LEU GLN ALA GLY ALA ASP ILE SER MET SEQRES 12 A 249 ILE GLY GLN PHE GLY VAL GLY PHE TYR SER ALA TYR LEU SEQRES 13 A 249 VAL ALA GLU LYS VAL THR VAL ILE THR LYS HIS ASN ASP SEQRES 14 A 249 ASP GLU GLN TYR ALA TRP GLU SER SER ALA GLY GLY SER SEQRES 15 A 249 PHE THR VAL ARG THR ASP THR GLY GLU PRO MET GLY ARG SEQRES 16 A 249 GLY THR LYS VAL ILE LEU HIS LEU LYS GLU ASP GLN THR SEQRES 17 A 249 GLU TYR LEU GLU GLU ARG ARG ILE LYS GLU ILE VAL LYS SEQRES 18 A 249 LYS HIS SER GLN PHE ILE GLY TYR PRO ILE THR LEU PHE SEQRES 19 A 249 VAL GLU LYS GLU ARG ASP LYS GLU VAL SER ASP ASP GLU SEQRES 20 A 249 ALA GLU HET VJ6 A 301 40 HET MG A 302 1 HETNAM VJ6 VALERJESOMYCIN HETNAM MG MAGNESIUM ION HETSYN VJ6 (4E,8S,9S,10E,12S,13R,14S)-13,14,20-TRIMETHOXY-4,10,12- HETSYN 2 VJ6 TRIMETHYL-3-OXO-16-OXA-2-AZABICYCLO[16.3.1]DOCOSA- HETSYN 3 VJ6 1(22),4,10,18,20-PENTAENE-8,9-DIYL DICARBAMATE FORMUL 2 VJ6 C28 H41 N3 O9 FORMUL 3 MG MG 2+ FORMUL 4 HOH *276(H2 O) HELIX 1 1 GLN A 23 THR A 36 1 14 HELIX 2 2 GLU A 42 ASP A 66 1 25 HELIX 3 3 PRO A 67 ASP A 71 5 5 HELIX 4 4 THR A 99 LEU A 107 1 9 HELIX 5 5 GLY A 114 GLN A 123 1 10 HELIX 6 6 ASP A 127 GLY A 135 5 9 HELIX 7 7 VAL A 136 LEU A 143 5 8 HELIX 8 8 GLN A 194 LEU A 198 5 5 HELIX 9 9 GLU A 199 SER A 211 1 13 SHEET 1 A 8 GLU A 18 ALA A 21 0 SHEET 2 A 8 SER A 169 THR A 174 -1 O PHE A 170 N PHE A 20 SHEET 3 A 8 TYR A 160 SER A 164 -1 N ALA A 161 O ARG A 173 SHEET 4 A 8 ALA A 145 LYS A 153 -1 N VAL A 150 O TRP A 162 SHEET 5 A 8 GLY A 183 LEU A 190 -1 O ILE A 187 N THR A 149 SHEET 6 A 8 THR A 88 ASP A 93 -1 N ILE A 91 O VAL A 186 SHEET 7 A 8 ILE A 78 ASN A 83 -1 N ILE A 81 O THR A 90 SHEET 8 A 8 ILE A 218 LEU A 220 1 O THR A 219 N LEU A 80 LINK OD2AASP A 54 MG MG A 302 1555 1555 1.85 LINK MG MG A 302 O HOH A 444 1555 1555 2.10 LINK MG MG A 302 O HOH A 494 1555 1555 2.29 LINK MG MG A 302 O HOH A 598 1555 1555 1.96 SITE 1 AC1 19 ASN A 51 SER A 52 ASP A 54 ALA A 55 SITE 2 AC1 19 LYS A 58 ASP A 93 ILE A 96 ASP A 102 SITE 3 AC1 19 ASN A 106 LEU A 107 LYS A 112 GLY A 135 SITE 4 AC1 19 VAL A 136 GLY A 137 PHE A 138 THR A 184 SITE 5 AC1 19 VAL A 186 HOH A 401 HOH A 412 SITE 1 AC2 4 ASP A 54 HOH A 444 HOH A 494 HOH A 598 CRYST1 53.370 44.490 53.920 90.00 114.80 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018737 0.000000 0.008658 0.00000 SCALE2 0.000000 0.022477 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020430 0.00000