HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 20-MAR-13 4JQR TITLE CRYSTAL STRUCTURE OF A DUF4465 FAMILY PROTEIN (BACCAC_02373) FROM TITLE 2 BACTEROIDES CACCAE ATCC 43185 AT 2.05 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES CACCAE; SOURCE 3 ORGANISM_TAXID: 411901; SOURCE 4 STRAIN: ATCC 43185; SOURCE 5 GENE: ZP_01960755.1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS PF14717 FAMILY PROTEIN, DUF4465, STRUCTURAL GENOMICS, JOINT CENTER KEYWDS 2 FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI- KEYWDS 3 BIOLOGY, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 01-FEB-23 4JQR 1 REMARK SEQADV LINK REVDAT 4 24-JAN-18 4JQR 1 JRNL REVDAT 3 15-NOV-17 4JQR 1 REMARK REVDAT 2 24-DEC-14 4JQR 1 TITLE REVDAT 1 10-APR-13 4JQR 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN (BACCAC_02373) JRNL TITL 2 FROM BACTEROIDES CACCAE ATCC 43185 AT 2.05 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 24708 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 1262 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 12 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.14 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.99 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2976 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2110 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2825 REMARK 3 BIN R VALUE (WORKING SET) : 0.2100 REMARK 3 BIN FREE R VALUE : 0.2301 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.07 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 151 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1736 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 67 REMARK 3 SOLVENT ATOMS : 258 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.10260 REMARK 3 B22 (A**2) : -5.10260 REMARK 3 B33 (A**2) : 10.20520 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.228 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1848 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 2491 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 818 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 57 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 259 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1848 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 2 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 240 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2298 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.02 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.86 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.70 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|26 - 247} REMARK 3 ORIGIN FOR THE GROUP (A): 51.1994 45.4882 -2.7966 REMARK 3 T TENSOR REMARK 3 T11: -0.0062 T22: -0.0536 REMARK 3 T33: -0.0840 T12: 0.0294 REMARK 3 T13: 0.0343 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 0.5697 L22: 0.8832 REMARK 3 L33: 2.2191 L12: 0.1158 REMARK 3 L13: 0.1125 L23: -0.3394 REMARK 3 S TENSOR REMARK 3 S11: 0.0458 S12: -0.0371 S13: 0.1344 REMARK 3 S21: 0.0195 S22: -0.0110 S23: 0.0572 REMARK 3 S31: -0.3158 S32: -0.0151 S33: -0.0348 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 3. THE MAD PHASES WERE USED AS RESTRAINTS DURING REMARK 3 REFINEMENT. 4. NA, CL, SO4 AND EDO ARE PRESENT IN REMARK 3 CRYSTALLIZATION/CRYO CONDITIONS. REMARK 4 REMARK 4 4JQR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000078385. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.33 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918374,0.979415,0.979129 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : KOHZU: DOUBLE CRYSTAL SI(111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24729 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 29.249 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.13100 REMARK 200 FOR THE DATA SET : 10.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 0.01300 REMARK 200 R SYM FOR SHELL (I) : 1.32800 REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.3M AMMONIUM SULFATE, 0.1M SODIUM REMARK 280 CITRATE - CITRIC ACID PH 4.33, NANODROP, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.18933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 23.09467 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 23.09467 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 46.18933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 ASP A 20 REMARK 465 ASP A 21 REMARK 465 ASP A 22 REMARK 465 ASP A 23 REMARK 465 ASP A 24 REMARK 465 VAL A 25 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 26 CD CE NZ REMARK 470 TYR A 158 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 121 -75.00 -55.97 REMARK 500 GLN A 154 -0.66 -144.27 REMARK 500 ASP A 156 25.68 -140.77 REMARK 500 ASN A 191 87.57 -157.93 REMARK 500 GLN A 212 -135.21 67.70 REMARK 500 ASN A 213 36.62 -94.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ILE A 108 O REMARK 620 2 VAL A 111 O 108.8 REMARK 620 3 ASP A 240 OD1 139.2 92.2 REMARK 620 4 ASP A 240 OD2 88.3 100.0 53.1 REMARK 620 5 HOH A 460 O 91.2 86.1 125.6 173.7 REMARK 620 6 HOH A 482 O 112.4 130.8 73.5 106.9 67.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 312 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 313 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 314 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 315 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 316 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 317 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 318 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-416583 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT (20-247) WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 4JQR A 20 247 UNP A5ZHK1 A5ZHK1_9BACE 20 247 SEQADV 4JQR GLY A 0 UNP A5ZHK1 EXPRESSION TAG SEQRES 1 A 229 GLY ASP ASP ASP ASP ASP VAL LYS ASN GLU VAL VAL VAL SEQRES 2 A 229 SER PHE GLU ASN LEU LEU THR GLU GLU ASN SER GLN PHE SEQRES 3 A 229 ILE ALA ASP GLY THR PRO ASN ASN GLN ALA PHE GLN GLU SEQRES 4 A 229 THR ASP PHE LYS ASP PRO LYS ASN LEU ILE ASN PHE ASN SEQRES 5 A 229 HIS TYR TYR ALA ASP TRP GLY SER GLY TYR SER PHE ALA SEQRES 6 A 229 GLY PHE SER TYR MSE ASN ILE THR ASP ASN GLN THR ALA SEQRES 7 A 229 ASN SER PRO ALA PRO ILE THR GLY LYS ALA LYS ILE GLY SEQRES 8 A 229 SER VAL TYR ILE GLY VAL ASP SER THR ASP GLY GLU TYR SEQRES 9 A 229 GLY THR PRO ALA ILE LEU THR ILE LEU ASP THR ASN TYR SEQRES 10 A 229 LYS LEU LYS GLY THR TRP ILE ALA ASN SER THR TRP ALA SEQRES 11 A 229 TYR MSE GLY MSE ILE GLN GLY ASP GLY TYR ALA ARG ALA SEQRES 12 A 229 PHE LYS ALA GLY ASP TRP TYR LYS VAL THR ALA THR GLY SEQRES 13 A 229 TYR ASP GLU ALA GLY ASN GLU THR GLY LYS ALA GLU ILE SEQRES 14 A 229 LEU LEU ALA ASN TYR LYS THR ASP ASN ASP LEU PRO VAL SEQRES 15 A 229 LYS GLU TRP ILE TRP PHE ASP LEU THR PRO LEU GLN ASN SEQRES 16 A 229 ALA VAL LYS VAL LYS PHE ILE PRO ASP SER SER ASP LYS SEQRES 17 A 229 ASN GLU TYR GLY MSE ASN THR ALA SER TYR PHE CYS LEU SEQRES 18 A 229 ASP GLY ILE THR LEU ILE GLU LYS MODRES 4JQR MSE A 88 MET SELENOMETHIONINE MODRES 4JQR MSE A 150 MET SELENOMETHIONINE MODRES 4JQR MSE A 152 MET SELENOMETHIONINE MODRES 4JQR MSE A 231 MET SELENOMETHIONINE HET MSE A 88 8 HET MSE A 150 8 HET MSE A 152 8 HET MSE A 231 8 HET NA A 301 1 HET CL A 302 1 HET SO4 A 303 5 HET EDO A 304 4 HET EDO A 305 4 HET EDO A 306 4 HET EDO A 307 4 HET EDO A 308 4 HET EDO A 309 4 HET EDO A 310 4 HET EDO A 311 4 HET EDO A 312 4 HET EDO A 313 4 HET EDO A 314 4 HET EDO A 315 4 HET EDO A 316 4 HET EDO A 317 4 HET EDO A 318 4 HETNAM MSE SELENOMETHIONINE HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 2 NA NA 1+ FORMUL 3 CL CL 1- FORMUL 4 SO4 O4 S 2- FORMUL 5 EDO 15(C2 H6 O2) FORMUL 20 HOH *258(H2 O) HELIX 1 1 SER A 145 GLY A 155 1 11 HELIX 2 2 THR A 209 GLN A 212 5 4 SHEET 1 A 9 GLU A 28 VAL A 30 0 SHEET 2 A 9 TYR A 236 GLU A 246 -1 O LEU A 244 N VAL A 29 SHEET 3 A 9 TYR A 112 ASP A 116 -1 N ILE A 113 O LEU A 239 SHEET 4 A 9 TYR A 80 MSE A 88 -1 N SER A 86 O GLY A 114 SHEET 5 A 9 ILE A 67 ASP A 75 -1 N ALA A 74 O SER A 81 SHEET 6 A 9 ALA A 126 ILE A 130 -1 O THR A 129 N ASN A 68 SHEET 7 A 9 LYS A 216 SER A 223 -1 O VAL A 217 N LEU A 128 SHEET 8 A 9 TRP A 167 TYR A 175 -1 N LYS A 169 O ASP A 222 SHEET 9 A 9 GLU A 181 ASN A 191 -1 O LEU A 189 N TYR A 168 SHEET 1 B 7 GLN A 56 LYS A 61 0 SHEET 2 B 7 ILE A 67 ASP A 75 -1 O PHE A 69 N PHE A 60 SHEET 3 B 7 TYR A 80 MSE A 88 -1 O SER A 81 N ALA A 74 SHEET 4 B 7 TYR A 112 ASP A 116 -1 O GLY A 114 N SER A 86 SHEET 5 B 7 TYR A 236 GLU A 246 -1 O LEU A 239 N ILE A 113 SHEET 6 B 7 TYR A 135 ASN A 144 -1 N LYS A 138 O THR A 243 SHEET 7 B 7 ILE A 204 ASP A 207 -1 O PHE A 206 N THR A 140 SHEET 1 C 2 LYS A 226 ASN A 227 0 SHEET 2 C 2 GLY A 230 MSE A 231 -1 O GLY A 230 N ASN A 227 LINK C TYR A 87 N MSE A 88 1555 1555 1.33 LINK C MSE A 88 N ASN A 89 1555 1555 1.33 LINK C TYR A 149 N MSE A 150 1555 1555 1.36 LINK C MSE A 150 N GLY A 151 1555 1555 1.34 LINK C GLY A 151 N MSE A 152 1555 1555 1.34 LINK C MSE A 152 N ILE A 153 1555 1555 1.35 LINK C GLY A 230 N MSE A 231 1555 1555 1.34 LINK C MSE A 231 N ASN A 232 1555 1555 1.35 LINK O ILE A 108 NA NA A 301 1555 1555 2.24 LINK O VAL A 111 NA NA A 301 1555 1555 2.24 LINK OD1 ASP A 240 NA NA A 301 1555 1555 2.27 LINK OD2 ASP A 240 NA NA A 301 1555 1555 2.59 LINK NA NA A 301 O HOH A 460 1555 1555 2.31 LINK NA NA A 301 O HOH A 482 1555 1555 3.15 SITE 1 AC1 5 ILE A 108 VAL A 111 ASP A 240 EDO A 310 SITE 2 AC1 5 HOH A 460 SITE 1 AC2 4 GLY A 48 THR A 58 TYR A 73 HOH A 511 SITE 1 AC3 9 LYS A 169 ASP A 176 GLU A 177 GLU A 186 SITE 2 AC3 9 VAL A 215 EDO A 307 HOH A 433 HOH A 585 SITE 3 AC3 9 HOH A 652 SITE 1 AC4 2 ASN A 68 THR A 129 SITE 1 AC5 4 LYS A 138 TRP A 205 HOH A 631 HOH A 658 SITE 1 AC6 4 TRP A 76 GLY A 77 GLY A 157 TYR A 158 SITE 1 AC7 6 TRP A 167 LYS A 169 ASP A 176 GLU A 177 SITE 2 AC7 6 ALA A 178 SO4 A 303 SITE 1 AC8 3 TYR A 175 GLY A 179 HOH A 473 SITE 1 AC9 5 ASN A 52 ARG A 160 SER A 224 ASP A 225 SITE 2 AC9 5 HOH A 617 SITE 1 BC1 8 VAL A 31 VAL A 111 ILE A 113 ASP A 240 SITE 2 BC1 8 GLY A 241 ILE A 242 NA A 301 HOH A 436 SITE 1 BC2 4 PHE A 55 TYR A 122 GLY A 123 GLU A 228 SITE 1 BC3 4 LYS A 184 HOH A 417 HOH A 424 HOH A 432 SITE 1 BC4 5 GLN A 43 TYR A 80 PRO A 99 EDO A 316 SITE 2 BC4 5 HOH A 515 SITE 1 BC5 2 SER A 78 TYR A 80 SITE 1 BC6 7 TRP A 147 ALA A 234 SER A 235 TYR A 236 SITE 2 BC6 7 HOH A 440 HOH A 542 HOH A 621 SITE 1 BC7 6 ILE A 90 ASP A 92 THR A 95 ASN A 97 SITE 2 BC7 6 SER A 98 EDO A 313 SITE 1 BC8 2 TYR A 135 HOH A 411 SITE 1 BC9 4 TYR A 175 GLU A 181 LYS A 218 HOH A 432 CRYST1 98.573 98.573 69.284 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010145 0.005857 0.000000 0.00000 SCALE2 0.000000 0.011714 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014433 0.00000