data_4JQW # _entry.id 4JQW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4JQW pdb_00004jqw 10.2210/pdb4jqw/pdb RCSB RCSB078390 ? ? WWPDB D_1000078390 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-03-26 2 'Structure model' 1 1 2014-12-24 3 'Structure model' 1 2 2023-11-08 4 'Structure model' 1 3 2024-10-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_special_symmetry 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_ref_seq_dif 8 3 'Structure model' struct_site 9 4 'Structure model' pdbx_entry_details 10 4 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_ref_seq_dif.details' 5 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4JQW _pdbx_database_status.recvd_initial_deposition_date 2013-03-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2NSN 'NOD1 CARD dimer' unspecified PDB 2NZ7 'NOD1 CARD dimer' unspecified PDB 4E9M 'NOD1 CARD dimer' unspecified PDB 1UBQ Ubiquitin unspecified PDB 2O6V 'Lys48-linked tetra-ubiquitin' unspecified PDB 1AAR 'Lys48-linked di-ubiquitin' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ver Heul, A.M.' 1 'Gakhar, L.' 2 'Piper, R.C.' 3 'Ramaswamy, S.' 4 # _citation.id primary _citation.title 'Crystal structure of a complex of NOD1 CARD and ubiquitin' _citation.journal_abbrev 'Plos One' _citation.journal_volume 9 _citation.page_first e104017 _citation.page_last e104017 _citation.year 2014 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25127239 _citation.pdbx_database_id_DOI 10.1371/journal.pone.0104017 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ver Heul, A.M.' 1 ? primary 'Gakhar, L.' 2 ? primary 'Piper, R.C.' 3 ? primary 'Ramaswamy, S.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Nucleotide-binding oligomerization domain-containing protein 1' 12041.616 1 ? ? 'CARD domain' ? 2 polymer man Polyubiquitin-C 8576.831 1 ? ? Ubiquitin ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Caspase recruitment domain-containing protein 4' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;MSHPHIQLLKSNRELLVTHIRNTQCLVDNLLKNDYFSAEDAEIV(CAS)ACPTQPDKVRKILDLVQSKGEEVSEFFLYLL QQLADAYVDLRPWLLEIGLEHHHHHH ; ;MSHPHIQLLKSNRELLVTHIRNTQCLVDNLLKNDYFSAEDAEIVCACPTQPDKVRKILDLVQSKGEEVSEFFLYLLQQLA DAYVDLRPWLLEIGLEHHHHHH ; A ? 2 'polypeptide(L)' no no MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG C ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name 'PHOSPHATE ION' _pdbx_entity_nonpoly.comp_id PO4 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 HIS n 1 4 PRO n 1 5 HIS n 1 6 ILE n 1 7 GLN n 1 8 LEU n 1 9 LEU n 1 10 LYS n 1 11 SER n 1 12 ASN n 1 13 ARG n 1 14 GLU n 1 15 LEU n 1 16 LEU n 1 17 VAL n 1 18 THR n 1 19 HIS n 1 20 ILE n 1 21 ARG n 1 22 ASN n 1 23 THR n 1 24 GLN n 1 25 CYS n 1 26 LEU n 1 27 VAL n 1 28 ASP n 1 29 ASN n 1 30 LEU n 1 31 LEU n 1 32 LYS n 1 33 ASN n 1 34 ASP n 1 35 TYR n 1 36 PHE n 1 37 SER n 1 38 ALA n 1 39 GLU n 1 40 ASP n 1 41 ALA n 1 42 GLU n 1 43 ILE n 1 44 VAL n 1 45 CAS n 1 46 ALA n 1 47 CYS n 1 48 PRO n 1 49 THR n 1 50 GLN n 1 51 PRO n 1 52 ASP n 1 53 LYS n 1 54 VAL n 1 55 ARG n 1 56 LYS n 1 57 ILE n 1 58 LEU n 1 59 ASP n 1 60 LEU n 1 61 VAL n 1 62 GLN n 1 63 SER n 1 64 LYS n 1 65 GLY n 1 66 GLU n 1 67 GLU n 1 68 VAL n 1 69 SER n 1 70 GLU n 1 71 PHE n 1 72 PHE n 1 73 LEU n 1 74 TYR n 1 75 LEU n 1 76 LEU n 1 77 GLN n 1 78 GLN n 1 79 LEU n 1 80 ALA n 1 81 ASP n 1 82 ALA n 1 83 TYR n 1 84 VAL n 1 85 ASP n 1 86 LEU n 1 87 ARG n 1 88 PRO n 1 89 TRP n 1 90 LEU n 1 91 LEU n 1 92 GLU n 1 93 ILE n 1 94 GLY n 1 95 LEU n 1 96 GLU n 1 97 HIS n 1 98 HIS n 1 99 HIS n 1 100 HIS n 1 101 HIS n 1 102 HIS n 2 1 MET n 2 2 GLN n 2 3 ILE n 2 4 PHE n 2 5 VAL n 2 6 LYS n 2 7 THR n 2 8 LEU n 2 9 THR n 2 10 GLY n 2 11 LYS n 2 12 THR n 2 13 ILE n 2 14 THR n 2 15 LEU n 2 16 GLU n 2 17 VAL n 2 18 GLU n 2 19 PRO n 2 20 SER n 2 21 ASP n 2 22 THR n 2 23 ILE n 2 24 GLU n 2 25 ASN n 2 26 VAL n 2 27 LYS n 2 28 ALA n 2 29 LYS n 2 30 ILE n 2 31 GLN n 2 32 ASP n 2 33 LYS n 2 34 GLU n 2 35 GLY n 2 36 ILE n 2 37 PRO n 2 38 PRO n 2 39 ASP n 2 40 GLN n 2 41 GLN n 2 42 ARG n 2 43 LEU n 2 44 ILE n 2 45 PHE n 2 46 ALA n 2 47 GLY n 2 48 LYS n 2 49 GLN n 2 50 LEU n 2 51 GLU n 2 52 ASP n 2 53 GLY n 2 54 ARG n 2 55 THR n 2 56 LEU n 2 57 SER n 2 58 ASP n 2 59 TYR n 2 60 ASN n 2 61 ILE n 2 62 GLN n 2 63 LYS n 2 64 GLU n 2 65 SER n 2 66 THR n 2 67 LEU n 2 68 HIS n 2 69 LEU n 2 70 VAL n 2 71 LEU n 2 72 ARG n 2 73 LEU n 2 74 ARG n 2 75 GLY n 2 76 GLY n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human ? 'CARD4, NOD1' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? BL21 ? ? ? ? ? ? ? plasmid ? ? ? pET21 ? ? 2 1 sample ? ? ? human ? UBC ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? BL21 ? ? ? ? ? ? ? plasmid ? ? ? pRSUb ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CAS 'L-peptide linking' n 'S-(DIMETHYLARSENIC)CYSTEINE' ? 'C5 H12 As N O2 S' 225.141 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 15 ? ? ? A . n A 1 2 SER 2 16 ? ? ? A . n A 1 3 HIS 3 17 17 HIS HIS A . n A 1 4 PRO 4 18 18 PRO PRO A . n A 1 5 HIS 5 19 19 HIS HIS A . n A 1 6 ILE 6 20 20 ILE ILE A . n A 1 7 GLN 7 21 21 GLN GLN A . n A 1 8 LEU 8 22 22 LEU LEU A . n A 1 9 LEU 9 23 23 LEU LEU A . n A 1 10 LYS 10 24 24 LYS LYS A . n A 1 11 SER 11 25 25 SER SER A . n A 1 12 ASN 12 26 26 ASN ASN A . n A 1 13 ARG 13 27 27 ARG ARG A . n A 1 14 GLU 14 28 28 GLU GLU A . n A 1 15 LEU 15 29 29 LEU LEU A . n A 1 16 LEU 16 30 30 LEU LEU A . n A 1 17 VAL 17 31 31 VAL VAL A . n A 1 18 THR 18 32 32 THR THR A . n A 1 19 HIS 19 33 33 HIS HIS A . n A 1 20 ILE 20 34 34 ILE ILE A . n A 1 21 ARG 21 35 35 ARG ARG A . n A 1 22 ASN 22 36 36 ASN ASN A . n A 1 23 THR 23 37 37 THR THR A . n A 1 24 GLN 24 38 38 GLN GLN A . n A 1 25 CYS 25 39 39 CYS CYS A . n A 1 26 LEU 26 40 40 LEU LEU A . n A 1 27 VAL 27 41 41 VAL VAL A . n A 1 28 ASP 28 42 42 ASP ASP A . n A 1 29 ASN 29 43 43 ASN ASN A . n A 1 30 LEU 30 44 44 LEU LEU A . n A 1 31 LEU 31 45 45 LEU LEU A . n A 1 32 LYS 32 46 46 LYS LYS A . n A 1 33 ASN 33 47 47 ASN ASN A . n A 1 34 ASP 34 48 48 ASP ASP A . n A 1 35 TYR 35 49 49 TYR TYR A . n A 1 36 PHE 36 50 50 PHE PHE A . n A 1 37 SER 37 51 51 SER SER A . n A 1 38 ALA 38 52 52 ALA ALA A . n A 1 39 GLU 39 53 53 GLU GLU A . n A 1 40 ASP 40 54 54 ASP ASP A . n A 1 41 ALA 41 55 55 ALA ALA A . n A 1 42 GLU 42 56 56 GLU GLU A . n A 1 43 ILE 43 57 57 ILE ILE A . n A 1 44 VAL 44 58 58 VAL VAL A . n A 1 45 CAS 45 59 59 CAS CAS A . n A 1 46 ALA 46 60 60 ALA ALA A . n A 1 47 CYS 47 61 61 CYS CYS A . n A 1 48 PRO 48 62 62 PRO PRO A . n A 1 49 THR 49 63 63 THR THR A . n A 1 50 GLN 50 64 64 GLN GLN A . n A 1 51 PRO 51 65 65 PRO PRO A . n A 1 52 ASP 52 66 66 ASP ASP A . n A 1 53 LYS 53 67 67 LYS LYS A . n A 1 54 VAL 54 68 68 VAL VAL A . n A 1 55 ARG 55 69 69 ARG ARG A . n A 1 56 LYS 56 70 70 LYS LYS A . n A 1 57 ILE 57 71 71 ILE ILE A . n A 1 58 LEU 58 72 72 LEU LEU A . n A 1 59 ASP 59 73 73 ASP ASP A . n A 1 60 LEU 60 74 74 LEU LEU A . n A 1 61 VAL 61 75 75 VAL VAL A . n A 1 62 GLN 62 76 76 GLN GLN A . n A 1 63 SER 63 77 77 SER SER A . n A 1 64 LYS 64 78 78 LYS LYS A . n A 1 65 GLY 65 79 79 GLY GLY A . n A 1 66 GLU 66 80 80 GLU GLU A . n A 1 67 GLU 67 81 81 GLU GLU A . n A 1 68 VAL 68 82 82 VAL VAL A . n A 1 69 SER 69 83 83 SER SER A . n A 1 70 GLU 70 84 84 GLU GLU A . n A 1 71 PHE 71 85 85 PHE PHE A . n A 1 72 PHE 72 86 86 PHE PHE A . n A 1 73 LEU 73 87 87 LEU LEU A . n A 1 74 TYR 74 88 88 TYR TYR A . n A 1 75 LEU 75 89 89 LEU LEU A . n A 1 76 LEU 76 90 90 LEU LEU A . n A 1 77 GLN 77 91 91 GLN GLN A . n A 1 78 GLN 78 92 92 GLN GLN A . n A 1 79 LEU 79 93 93 LEU LEU A . n A 1 80 ALA 80 94 94 ALA ALA A . n A 1 81 ASP 81 95 95 ASP ASP A . n A 1 82 ALA 82 96 96 ALA ALA A . n A 1 83 TYR 83 97 97 TYR TYR A . n A 1 84 VAL 84 98 98 VAL VAL A . n A 1 85 ASP 85 99 99 ASP ASP A . n A 1 86 LEU 86 100 100 LEU LEU A . n A 1 87 ARG 87 101 101 ARG ARG A . n A 1 88 PRO 88 102 102 PRO PRO A . n A 1 89 TRP 89 103 103 TRP TRP A . n A 1 90 LEU 90 104 104 LEU LEU A . n A 1 91 LEU 91 105 105 LEU LEU A . n A 1 92 GLU 92 106 106 GLU GLU A . n A 1 93 ILE 93 107 107 ILE ILE A . n A 1 94 GLY 94 108 108 GLY GLY A . n A 1 95 LEU 95 109 ? ? ? A . n A 1 96 GLU 96 110 ? ? ? A . n A 1 97 HIS 97 111 ? ? ? A . n A 1 98 HIS 98 112 ? ? ? A . n A 1 99 HIS 99 113 ? ? ? A . n A 1 100 HIS 100 114 ? ? ? A . n A 1 101 HIS 101 115 ? ? ? A . n A 1 102 HIS 102 116 ? ? ? A . n B 2 1 MET 1 1 1 MET MET C . n B 2 2 GLN 2 2 2 GLN GLN C . n B 2 3 ILE 3 3 3 ILE ILE C . n B 2 4 PHE 4 4 4 PHE PHE C . n B 2 5 VAL 5 5 5 VAL VAL C . n B 2 6 LYS 6 6 6 LYS LYS C . n B 2 7 THR 7 7 7 THR THR C . n B 2 8 LEU 8 8 8 LEU LEU C . n B 2 9 THR 9 9 9 THR THR C . n B 2 10 GLY 10 10 10 GLY GLY C . n B 2 11 LYS 11 11 11 LYS LYS C . n B 2 12 THR 12 12 12 THR THR C . n B 2 13 ILE 13 13 13 ILE ILE C . n B 2 14 THR 14 14 14 THR THR C . n B 2 15 LEU 15 15 15 LEU LEU C . n B 2 16 GLU 16 16 16 GLU GLU C . n B 2 17 VAL 17 17 17 VAL VAL C . n B 2 18 GLU 18 18 18 GLU GLU C . n B 2 19 PRO 19 19 19 PRO PRO C . n B 2 20 SER 20 20 20 SER SER C . n B 2 21 ASP 21 21 21 ASP ASP C . n B 2 22 THR 22 22 22 THR THR C . n B 2 23 ILE 23 23 23 ILE ILE C . n B 2 24 GLU 24 24 24 GLU GLU C . n B 2 25 ASN 25 25 25 ASN ASN C . n B 2 26 VAL 26 26 26 VAL VAL C . n B 2 27 LYS 27 27 27 LYS LYS C . n B 2 28 ALA 28 28 28 ALA ALA C . n B 2 29 LYS 29 29 29 LYS LYS C . n B 2 30 ILE 30 30 30 ILE ILE C . n B 2 31 GLN 31 31 31 GLN GLN C . n B 2 32 ASP 32 32 32 ASP ASP C . n B 2 33 LYS 33 33 33 LYS LYS C . n B 2 34 GLU 34 34 34 GLU GLU C . n B 2 35 GLY 35 35 35 GLY GLY C . n B 2 36 ILE 36 36 36 ILE ILE C . n B 2 37 PRO 37 37 37 PRO PRO C . n B 2 38 PRO 38 38 38 PRO PRO C . n B 2 39 ASP 39 39 39 ASP ASP C . n B 2 40 GLN 40 40 40 GLN GLN C . n B 2 41 GLN 41 41 41 GLN GLN C . n B 2 42 ARG 42 42 42 ARG ARG C . n B 2 43 LEU 43 43 43 LEU LEU C . n B 2 44 ILE 44 44 44 ILE ILE C . n B 2 45 PHE 45 45 45 PHE PHE C . n B 2 46 ALA 46 46 46 ALA ALA C . n B 2 47 GLY 47 47 47 GLY GLY C . n B 2 48 LYS 48 48 48 LYS LYS C . n B 2 49 GLN 49 49 49 GLN GLN C . n B 2 50 LEU 50 50 50 LEU LEU C . n B 2 51 GLU 51 51 51 GLU GLU C . n B 2 52 ASP 52 52 52 ASP ASP C . n B 2 53 GLY 53 53 53 GLY GLY C . n B 2 54 ARG 54 54 54 ARG ARG C . n B 2 55 THR 55 55 55 THR THR C . n B 2 56 LEU 56 56 56 LEU LEU C . n B 2 57 SER 57 57 57 SER SER C . n B 2 58 ASP 58 58 58 ASP ASP C . n B 2 59 TYR 59 59 59 TYR TYR C . n B 2 60 ASN 60 60 60 ASN ASN C . n B 2 61 ILE 61 61 61 ILE ILE C . n B 2 62 GLN 62 62 62 GLN GLN C . n B 2 63 LYS 63 63 63 LYS LYS C . n B 2 64 GLU 64 64 64 GLU GLU C . n B 2 65 SER 65 65 65 SER SER C . n B 2 66 THR 66 66 66 THR THR C . n B 2 67 LEU 67 67 67 LEU LEU C . n B 2 68 HIS 68 68 68 HIS HIS C . n B 2 69 LEU 69 69 69 LEU LEU C . n B 2 70 VAL 70 70 70 VAL VAL C . n B 2 71 LEU 71 71 71 LEU LEU C . n B 2 72 ARG 72 72 72 ARG ARG C . n B 2 73 LEU 73 73 73 LEU LEU C . n B 2 74 ARG 74 74 ? ? ? C . n B 2 75 GLY 75 75 ? ? ? C . n B 2 76 GLY 76 76 ? ? ? C . n # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id PO4 _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1001 _pdbx_nonpoly_scheme.auth_seq_num 1001 _pdbx_nonpoly_scheme.pdb_mon_id PO4 _pdbx_nonpoly_scheme.auth_mon_id PO4 _pdbx_nonpoly_scheme.pdb_strand_id C _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Blu-Ice 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.8.1_1168)' ? 3 d*TREK 'data reduction' . ? 4 d*TREK 'data scaling' . ? 5 # _cell.entry_id 4JQW _cell.length_a 61.688 _cell.length_b 61.688 _cell.length_c 86.873 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4JQW _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4JQW _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.00 _exptl_crystal.density_percent_sol 38.63 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.6 _exptl_crystal_grow.pdbx_details '100mM PCB, 25% PEG1500, pH 8.6, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type NOIR-1 _diffrn_detector.pdbx_collection_date 2011-04-23 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Rosenbaum-Rock monochromator double crystal focusing' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 4.2.2' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 4.2.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 4JQW _reflns.observed_criterion_sigma_I 5 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 38.982 _reflns.d_resolution_high 2.90 _reflns.number_obs 4048 _reflns.number_all 4052 _reflns.percent_possible_obs 99.88 _reflns.pdbx_Rmerge_I_obs 0.050 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 28.4 _reflns.B_iso_Wilson_estimate 86.06 _reflns.pdbx_redundancy 13.35 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.9 _reflns_shell.d_res_low 3.0 _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_obs 0.207 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 11.40 _reflns_shell.pdbx_redundancy 13.92 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 395 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4JQW _refine.ls_number_reflns_obs 4046 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 38.982 _refine.ls_d_res_high 2.900 _refine.ls_percent_reflns_obs 99.83 _refine.ls_R_factor_obs 0.2302 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2256 _refine.ls_R_factor_R_free 0.2699 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.03 _refine.ls_number_reflns_R_free 406 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 57.4385 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB entries 2NSN, 1UBQ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.39 _refine.B_iso_max 99.840 _refine.B_iso_min 27.520 _refine.pdbx_overall_phase_error 30.7400 _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1333 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1338 _refine_hist.d_res_high 2.900 _refine_hist.d_res_low 38.982 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' f_bond_d 1357 0.003 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 1837 0.704 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 217 0.045 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 234 0.002 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 520 15.393 ? ? ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.redundancy_reflns_obs 2.9001 3.3196 3 100.0000 1176 . 0.2980 0.4083 . 131 . 1307 . 'X-RAY DIFFRACTION' . 3.3196 4.1816 3 100.0000 1190 . 0.2661 0.3392 . 133 . 1323 . 'X-RAY DIFFRACTION' . 4.1816 38.9852 3 100.0000 1274 . 0.1943 0.2177 . 142 . 1416 . 'X-RAY DIFFRACTION' . # _database_PDB_matrix.entry_id 4JQW _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4JQW _struct.title 'Crystal Structure of a Complex of NOD1 CARD and Ubiquitin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4JQW _struct_keywords.pdbx_keywords 'APOPTOSIS/SIGNALLING PROTEIN' _struct_keywords.text 'death domain-like fold, innate immunity, RIP2, ATG16L, S-dimethylarsenic, APOPTOSIS-SIGNALLING PROTEIN complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP NOD1_HUMAN Q9Y239 1 ;SHPHIQLLKSNRELLVTHIRNTQCLVDNLLKNDYFSAEDAEIVCACPTQPDKVRKILDLVQSKGEEVSEFFLYLLQQLAD AYVDLRPWLLEIG ; 16 ? 2 UNP UBC_HUMAN P0CG48 2 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4JQW A 2 ? 94 ? Q9Y239 16 ? 108 ? 16 108 2 2 4JQW C 1 ? 76 ? P0CG48 1 ? 76 ? 1 76 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4JQW MET A 1 ? UNP Q9Y239 ? ? 'expression tag' 15 1 1 4JQW LEU A 95 ? UNP Q9Y239 ? ? 'expression tag' 109 2 1 4JQW GLU A 96 ? UNP Q9Y239 ? ? 'expression tag' 110 3 1 4JQW HIS A 97 ? UNP Q9Y239 ? ? 'expression tag' 111 4 1 4JQW HIS A 98 ? UNP Q9Y239 ? ? 'expression tag' 112 5 1 4JQW HIS A 99 ? UNP Q9Y239 ? ? 'expression tag' 113 6 1 4JQW HIS A 100 ? UNP Q9Y239 ? ? 'expression tag' 114 7 1 4JQW HIS A 101 ? UNP Q9Y239 ? ? 'expression tag' 115 8 1 4JQW HIS A 102 ? UNP Q9Y239 ? ? 'expression tag' 116 9 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 5 ? ASN A 12 ? HIS A 19 ASN A 26 1 ? 8 HELX_P HELX_P2 2 ASN A 12 ? ILE A 20 ? ASN A 26 ILE A 34 1 ? 9 HELX_P HELX_P3 3 THR A 23 ? ASN A 33 ? THR A 37 ASN A 47 1 ? 11 HELX_P HELX_P4 4 SER A 37 ? CYS A 47 ? SER A 51 CYS A 61 1 ? 11 HELX_P HELX_P5 5 THR A 49 ? GLY A 65 ? THR A 63 GLY A 79 1 ? 17 HELX_P HELX_P6 6 GLY A 65 ? ASP A 81 ? GLY A 79 ASP A 95 1 ? 17 HELX_P HELX_P7 7 TYR A 83 ? ASP A 85 ? TYR A 97 ASP A 99 5 ? 3 HELX_P HELX_P8 8 LEU A 86 ? GLY A 94 ? LEU A 100 GLY A 108 1 ? 9 HELX_P HELX_P9 9 THR B 22 ? GLY B 35 ? THR C 22 GLY C 35 1 ? 14 HELX_P HELX_P10 10 PRO B 37 ? ASP B 39 ? PRO C 37 ASP C 39 5 ? 3 HELX_P HELX_P11 11 LEU B 56 ? ASN B 60 ? LEU C 56 ASN C 60 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A VAL 44 C ? ? ? 1_555 A CAS 45 N ? ? A VAL 58 A CAS 59 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale2 covale both ? A CAS 45 C ? ? ? 1_555 A ALA 46 N ? ? A CAS 59 A ALA 60 1_555 ? ? ? ? ? ? ? 1.329 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id CAS _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 45 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id . _pdbx_modification_feature.modified_residue_label_asym_id . _pdbx_modification_feature.modified_residue_label_seq_id . _pdbx_modification_feature.modified_residue_label_alt_id . _pdbx_modification_feature.auth_comp_id CAS _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 59 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id . _pdbx_modification_feature.modified_residue_auth_asym_id . _pdbx_modification_feature.modified_residue_auth_seq_id . _pdbx_modification_feature.modified_residue_PDB_ins_code . _pdbx_modification_feature.modified_residue_symmetry . _pdbx_modification_feature.comp_id_linking_atom . _pdbx_modification_feature.modified_residue_id_linking_atom . _pdbx_modification_feature.modified_residue_id CYS _pdbx_modification_feature.ref_pcm_id 1 _pdbx_modification_feature.ref_comp_id CAS _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Non-standard residue' # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR B 12 ? GLU B 16 ? THR C 12 GLU C 16 A 2 GLN B 2 ? THR B 7 ? GLN C 2 THR C 7 A 3 THR B 66 ? LEU B 71 ? THR C 66 LEU C 71 A 4 GLN B 41 ? PHE B 45 ? GLN C 41 PHE C 45 A 5 LYS B 48 ? GLN B 49 ? LYS C 48 GLN C 49 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU B 15 ? O LEU C 15 N ILE B 3 ? N ILE C 3 A 2 3 N PHE B 4 ? N PHE C 4 O LEU B 67 ? O LEU C 67 A 3 4 O HIS B 68 ? O HIS C 68 N ILE B 44 ? N ILE C 44 A 4 5 N PHE B 45 ? N PHE C 45 O LYS B 48 ? O LYS C 48 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id C _struct_site.pdbx_auth_comp_id PO4 _struct_site.pdbx_auth_seq_id 1001 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'BINDING SITE FOR RESIDUE PO4 C 1001' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ARG B 42 ? ARG C 42 . ? 8_554 ? 2 AC1 6 ARG B 42 ? ARG C 42 . ? 1_555 ? 3 AC1 6 GLN B 49 ? GLN C 49 . ? 8_554 ? 4 AC1 6 GLN B 49 ? GLN C 49 . ? 1_555 ? 5 AC1 6 ARG B 72 ? ARG C 72 . ? 1_555 ? 6 AC1 6 ARG B 72 ? ARG C 72 . ? 8_554 ? # _pdbx_entry_details.entry_id 4JQW _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 26 ? ? -87.90 32.72 2 1 ILE A 107 ? ? -74.58 -94.82 3 1 LEU C 8 ? ? -64.99 41.95 # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id CAS _pdbx_struct_mod_residue.label_seq_id 45 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id CAS _pdbx_struct_mod_residue.auth_seq_id 59 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id CYS _pdbx_struct_mod_residue.details 'S-(DIMETHYLARSENIC)CYSTEINE' # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 C PO4 1001 ? C PO4 . 2 1 C PO4 1001 ? C PO4 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 15 ? A MET 1 2 1 Y 1 A SER 16 ? A SER 2 3 1 Y 1 A LEU 109 ? A LEU 95 4 1 Y 1 A GLU 110 ? A GLU 96 5 1 Y 1 A HIS 111 ? A HIS 97 6 1 Y 1 A HIS 112 ? A HIS 98 7 1 Y 1 A HIS 113 ? A HIS 99 8 1 Y 1 A HIS 114 ? A HIS 100 9 1 Y 1 A HIS 115 ? A HIS 101 10 1 Y 1 A HIS 116 ? A HIS 102 11 1 Y 1 C ARG 74 ? B ARG 74 12 1 Y 1 C GLY 75 ? B GLY 75 13 1 Y 1 C GLY 76 ? B GLY 76 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CAS N N N N 74 CAS CA C N R 75 CAS CB C N N 76 CAS C C N N 77 CAS O O N N 78 CAS OXT O N N 79 CAS SG S N N 80 CAS AS AS N N 81 CAS CE1 C N N 82 CAS CE2 C N N 83 CAS H H N N 84 CAS H2 H N N 85 CAS HA H N N 86 CAS HB2 H N N 87 CAS HB3 H N N 88 CAS HXT H N N 89 CAS HE11 H N N 90 CAS HE12 H N N 91 CAS HE13 H N N 92 CAS HE21 H N N 93 CAS HE22 H N N 94 CAS HE23 H N N 95 CYS N N N N 96 CYS CA C N R 97 CYS C C N N 98 CYS O O N N 99 CYS CB C N N 100 CYS SG S N N 101 CYS OXT O N N 102 CYS H H N N 103 CYS H2 H N N 104 CYS HA H N N 105 CYS HB2 H N N 106 CYS HB3 H N N 107 CYS HG H N N 108 CYS HXT H N N 109 GLN N N N N 110 GLN CA C N S 111 GLN C C N N 112 GLN O O N N 113 GLN CB C N N 114 GLN CG C N N 115 GLN CD C N N 116 GLN OE1 O N N 117 GLN NE2 N N N 118 GLN OXT O N N 119 GLN H H N N 120 GLN H2 H N N 121 GLN HA H N N 122 GLN HB2 H N N 123 GLN HB3 H N N 124 GLN HG2 H N N 125 GLN HG3 H N N 126 GLN HE21 H N N 127 GLN HE22 H N N 128 GLN HXT H N N 129 GLU N N N N 130 GLU CA C N S 131 GLU C C N N 132 GLU O O N N 133 GLU CB C N N 134 GLU CG C N N 135 GLU CD C N N 136 GLU OE1 O N N 137 GLU OE2 O N N 138 GLU OXT O N N 139 GLU H H N N 140 GLU H2 H N N 141 GLU HA H N N 142 GLU HB2 H N N 143 GLU HB3 H N N 144 GLU HG2 H N N 145 GLU HG3 H N N 146 GLU HE2 H N N 147 GLU HXT H N N 148 GLY N N N N 149 GLY CA C N N 150 GLY C C N N 151 GLY O O N N 152 GLY OXT O N N 153 GLY H H N N 154 GLY H2 H N N 155 GLY HA2 H N N 156 GLY HA3 H N N 157 GLY HXT H N N 158 HIS N N N N 159 HIS CA C N S 160 HIS C C N N 161 HIS O O N N 162 HIS CB C N N 163 HIS CG C Y N 164 HIS ND1 N Y N 165 HIS CD2 C Y N 166 HIS CE1 C Y N 167 HIS NE2 N Y N 168 HIS OXT O N N 169 HIS H H N N 170 HIS H2 H N N 171 HIS HA H N N 172 HIS HB2 H N N 173 HIS HB3 H N N 174 HIS HD1 H N N 175 HIS HD2 H N N 176 HIS HE1 H N N 177 HIS HE2 H N N 178 HIS HXT H N N 179 ILE N N N N 180 ILE CA C N S 181 ILE C C N N 182 ILE O O N N 183 ILE CB C N S 184 ILE CG1 C N N 185 ILE CG2 C N N 186 ILE CD1 C N N 187 ILE OXT O N N 188 ILE H H N N 189 ILE H2 H N N 190 ILE HA H N N 191 ILE HB H N N 192 ILE HG12 H N N 193 ILE HG13 H N N 194 ILE HG21 H N N 195 ILE HG22 H N N 196 ILE HG23 H N N 197 ILE HD11 H N N 198 ILE HD12 H N N 199 ILE HD13 H N N 200 ILE HXT H N N 201 LEU N N N N 202 LEU CA C N S 203 LEU C C N N 204 LEU O O N N 205 LEU CB C N N 206 LEU CG C N N 207 LEU CD1 C N N 208 LEU CD2 C N N 209 LEU OXT O N N 210 LEU H H N N 211 LEU H2 H N N 212 LEU HA H N N 213 LEU HB2 H N N 214 LEU HB3 H N N 215 LEU HG H N N 216 LEU HD11 H N N 217 LEU HD12 H N N 218 LEU HD13 H N N 219 LEU HD21 H N N 220 LEU HD22 H N N 221 LEU HD23 H N N 222 LEU HXT H N N 223 LYS N N N N 224 LYS CA C N S 225 LYS C C N N 226 LYS O O N N 227 LYS CB C N N 228 LYS CG C N N 229 LYS CD C N N 230 LYS CE C N N 231 LYS NZ N N N 232 LYS OXT O N N 233 LYS H H N N 234 LYS H2 H N N 235 LYS HA H N N 236 LYS HB2 H N N 237 LYS HB3 H N N 238 LYS HG2 H N N 239 LYS HG3 H N N 240 LYS HD2 H N N 241 LYS HD3 H N N 242 LYS HE2 H N N 243 LYS HE3 H N N 244 LYS HZ1 H N N 245 LYS HZ2 H N N 246 LYS HZ3 H N N 247 LYS HXT H N N 248 MET N N N N 249 MET CA C N S 250 MET C C N N 251 MET O O N N 252 MET CB C N N 253 MET CG C N N 254 MET SD S N N 255 MET CE C N N 256 MET OXT O N N 257 MET H H N N 258 MET H2 H N N 259 MET HA H N N 260 MET HB2 H N N 261 MET HB3 H N N 262 MET HG2 H N N 263 MET HG3 H N N 264 MET HE1 H N N 265 MET HE2 H N N 266 MET HE3 H N N 267 MET HXT H N N 268 PHE N N N N 269 PHE CA C N S 270 PHE C C N N 271 PHE O O N N 272 PHE CB C N N 273 PHE CG C Y N 274 PHE CD1 C Y N 275 PHE CD2 C Y N 276 PHE CE1 C Y N 277 PHE CE2 C Y N 278 PHE CZ C Y N 279 PHE OXT O N N 280 PHE H H N N 281 PHE H2 H N N 282 PHE HA H N N 283 PHE HB2 H N N 284 PHE HB3 H N N 285 PHE HD1 H N N 286 PHE HD2 H N N 287 PHE HE1 H N N 288 PHE HE2 H N N 289 PHE HZ H N N 290 PHE HXT H N N 291 PO4 P P N N 292 PO4 O1 O N N 293 PO4 O2 O N N 294 PO4 O3 O N N 295 PO4 O4 O N N 296 PRO N N N N 297 PRO CA C N S 298 PRO C C N N 299 PRO O O N N 300 PRO CB C N N 301 PRO CG C N N 302 PRO CD C N N 303 PRO OXT O N N 304 PRO H H N N 305 PRO HA H N N 306 PRO HB2 H N N 307 PRO HB3 H N N 308 PRO HG2 H N N 309 PRO HG3 H N N 310 PRO HD2 H N N 311 PRO HD3 H N N 312 PRO HXT H N N 313 SER N N N N 314 SER CA C N S 315 SER C C N N 316 SER O O N N 317 SER CB C N N 318 SER OG O N N 319 SER OXT O N N 320 SER H H N N 321 SER H2 H N N 322 SER HA H N N 323 SER HB2 H N N 324 SER HB3 H N N 325 SER HG H N N 326 SER HXT H N N 327 THR N N N N 328 THR CA C N S 329 THR C C N N 330 THR O O N N 331 THR CB C N R 332 THR OG1 O N N 333 THR CG2 C N N 334 THR OXT O N N 335 THR H H N N 336 THR H2 H N N 337 THR HA H N N 338 THR HB H N N 339 THR HG1 H N N 340 THR HG21 H N N 341 THR HG22 H N N 342 THR HG23 H N N 343 THR HXT H N N 344 TRP N N N N 345 TRP CA C N S 346 TRP C C N N 347 TRP O O N N 348 TRP CB C N N 349 TRP CG C Y N 350 TRP CD1 C Y N 351 TRP CD2 C Y N 352 TRP NE1 N Y N 353 TRP CE2 C Y N 354 TRP CE3 C Y N 355 TRP CZ2 C Y N 356 TRP CZ3 C Y N 357 TRP CH2 C Y N 358 TRP OXT O N N 359 TRP H H N N 360 TRP H2 H N N 361 TRP HA H N N 362 TRP HB2 H N N 363 TRP HB3 H N N 364 TRP HD1 H N N 365 TRP HE1 H N N 366 TRP HE3 H N N 367 TRP HZ2 H N N 368 TRP HZ3 H N N 369 TRP HH2 H N N 370 TRP HXT H N N 371 TYR N N N N 372 TYR CA C N S 373 TYR C C N N 374 TYR O O N N 375 TYR CB C N N 376 TYR CG C Y N 377 TYR CD1 C Y N 378 TYR CD2 C Y N 379 TYR CE1 C Y N 380 TYR CE2 C Y N 381 TYR CZ C Y N 382 TYR OH O N N 383 TYR OXT O N N 384 TYR H H N N 385 TYR H2 H N N 386 TYR HA H N N 387 TYR HB2 H N N 388 TYR HB3 H N N 389 TYR HD1 H N N 390 TYR HD2 H N N 391 TYR HE1 H N N 392 TYR HE2 H N N 393 TYR HH H N N 394 TYR HXT H N N 395 VAL N N N N 396 VAL CA C N S 397 VAL C C N N 398 VAL O O N N 399 VAL CB C N N 400 VAL CG1 C N N 401 VAL CG2 C N N 402 VAL OXT O N N 403 VAL H H N N 404 VAL H2 H N N 405 VAL HA H N N 406 VAL HB H N N 407 VAL HG11 H N N 408 VAL HG12 H N N 409 VAL HG13 H N N 410 VAL HG21 H N N 411 VAL HG22 H N N 412 VAL HG23 H N N 413 VAL HXT H N N 414 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CAS N CA sing N N 70 CAS N H sing N N 71 CAS N H2 sing N N 72 CAS CA CB sing N N 73 CAS CA C sing N N 74 CAS CA HA sing N N 75 CAS CB SG sing N N 76 CAS CB HB2 sing N N 77 CAS CB HB3 sing N N 78 CAS C O doub N N 79 CAS C OXT sing N N 80 CAS OXT HXT sing N N 81 CAS SG AS sing N N 82 CAS AS CE1 sing N N 83 CAS AS CE2 sing N N 84 CAS CE1 HE11 sing N N 85 CAS CE1 HE12 sing N N 86 CAS CE1 HE13 sing N N 87 CAS CE2 HE21 sing N N 88 CAS CE2 HE22 sing N N 89 CAS CE2 HE23 sing N N 90 CYS N CA sing N N 91 CYS N H sing N N 92 CYS N H2 sing N N 93 CYS CA C sing N N 94 CYS CA CB sing N N 95 CYS CA HA sing N N 96 CYS C O doub N N 97 CYS C OXT sing N N 98 CYS CB SG sing N N 99 CYS CB HB2 sing N N 100 CYS CB HB3 sing N N 101 CYS SG HG sing N N 102 CYS OXT HXT sing N N 103 GLN N CA sing N N 104 GLN N H sing N N 105 GLN N H2 sing N N 106 GLN CA C sing N N 107 GLN CA CB sing N N 108 GLN CA HA sing N N 109 GLN C O doub N N 110 GLN C OXT sing N N 111 GLN CB CG sing N N 112 GLN CB HB2 sing N N 113 GLN CB HB3 sing N N 114 GLN CG CD sing N N 115 GLN CG HG2 sing N N 116 GLN CG HG3 sing N N 117 GLN CD OE1 doub N N 118 GLN CD NE2 sing N N 119 GLN NE2 HE21 sing N N 120 GLN NE2 HE22 sing N N 121 GLN OXT HXT sing N N 122 GLU N CA sing N N 123 GLU N H sing N N 124 GLU N H2 sing N N 125 GLU CA C sing N N 126 GLU CA CB sing N N 127 GLU CA HA sing N N 128 GLU C O doub N N 129 GLU C OXT sing N N 130 GLU CB CG sing N N 131 GLU CB HB2 sing N N 132 GLU CB HB3 sing N N 133 GLU CG CD sing N N 134 GLU CG HG2 sing N N 135 GLU CG HG3 sing N N 136 GLU CD OE1 doub N N 137 GLU CD OE2 sing N N 138 GLU OE2 HE2 sing N N 139 GLU OXT HXT sing N N 140 GLY N CA sing N N 141 GLY N H sing N N 142 GLY N H2 sing N N 143 GLY CA C sing N N 144 GLY CA HA2 sing N N 145 GLY CA HA3 sing N N 146 GLY C O doub N N 147 GLY C OXT sing N N 148 GLY OXT HXT sing N N 149 HIS N CA sing N N 150 HIS N H sing N N 151 HIS N H2 sing N N 152 HIS CA C sing N N 153 HIS CA CB sing N N 154 HIS CA HA sing N N 155 HIS C O doub N N 156 HIS C OXT sing N N 157 HIS CB CG sing N N 158 HIS CB HB2 sing N N 159 HIS CB HB3 sing N N 160 HIS CG ND1 sing Y N 161 HIS CG CD2 doub Y N 162 HIS ND1 CE1 doub Y N 163 HIS ND1 HD1 sing N N 164 HIS CD2 NE2 sing Y N 165 HIS CD2 HD2 sing N N 166 HIS CE1 NE2 sing Y N 167 HIS CE1 HE1 sing N N 168 HIS NE2 HE2 sing N N 169 HIS OXT HXT sing N N 170 ILE N CA sing N N 171 ILE N H sing N N 172 ILE N H2 sing N N 173 ILE CA C sing N N 174 ILE CA CB sing N N 175 ILE CA HA sing N N 176 ILE C O doub N N 177 ILE C OXT sing N N 178 ILE CB CG1 sing N N 179 ILE CB CG2 sing N N 180 ILE CB HB sing N N 181 ILE CG1 CD1 sing N N 182 ILE CG1 HG12 sing N N 183 ILE CG1 HG13 sing N N 184 ILE CG2 HG21 sing N N 185 ILE CG2 HG22 sing N N 186 ILE CG2 HG23 sing N N 187 ILE CD1 HD11 sing N N 188 ILE CD1 HD12 sing N N 189 ILE CD1 HD13 sing N N 190 ILE OXT HXT sing N N 191 LEU N CA sing N N 192 LEU N H sing N N 193 LEU N H2 sing N N 194 LEU CA C sing N N 195 LEU CA CB sing N N 196 LEU CA HA sing N N 197 LEU C O doub N N 198 LEU C OXT sing N N 199 LEU CB CG sing N N 200 LEU CB HB2 sing N N 201 LEU CB HB3 sing N N 202 LEU CG CD1 sing N N 203 LEU CG CD2 sing N N 204 LEU CG HG sing N N 205 LEU CD1 HD11 sing N N 206 LEU CD1 HD12 sing N N 207 LEU CD1 HD13 sing N N 208 LEU CD2 HD21 sing N N 209 LEU CD2 HD22 sing N N 210 LEU CD2 HD23 sing N N 211 LEU OXT HXT sing N N 212 LYS N CA sing N N 213 LYS N H sing N N 214 LYS N H2 sing N N 215 LYS CA C sing N N 216 LYS CA CB sing N N 217 LYS CA HA sing N N 218 LYS C O doub N N 219 LYS C OXT sing N N 220 LYS CB CG sing N N 221 LYS CB HB2 sing N N 222 LYS CB HB3 sing N N 223 LYS CG CD sing N N 224 LYS CG HG2 sing N N 225 LYS CG HG3 sing N N 226 LYS CD CE sing N N 227 LYS CD HD2 sing N N 228 LYS CD HD3 sing N N 229 LYS CE NZ sing N N 230 LYS CE HE2 sing N N 231 LYS CE HE3 sing N N 232 LYS NZ HZ1 sing N N 233 LYS NZ HZ2 sing N N 234 LYS NZ HZ3 sing N N 235 LYS OXT HXT sing N N 236 MET N CA sing N N 237 MET N H sing N N 238 MET N H2 sing N N 239 MET CA C sing N N 240 MET CA CB sing N N 241 MET CA HA sing N N 242 MET C O doub N N 243 MET C OXT sing N N 244 MET CB CG sing N N 245 MET CB HB2 sing N N 246 MET CB HB3 sing N N 247 MET CG SD sing N N 248 MET CG HG2 sing N N 249 MET CG HG3 sing N N 250 MET SD CE sing N N 251 MET CE HE1 sing N N 252 MET CE HE2 sing N N 253 MET CE HE3 sing N N 254 MET OXT HXT sing N N 255 PHE N CA sing N N 256 PHE N H sing N N 257 PHE N H2 sing N N 258 PHE CA C sing N N 259 PHE CA CB sing N N 260 PHE CA HA sing N N 261 PHE C O doub N N 262 PHE C OXT sing N N 263 PHE CB CG sing N N 264 PHE CB HB2 sing N N 265 PHE CB HB3 sing N N 266 PHE CG CD1 doub Y N 267 PHE CG CD2 sing Y N 268 PHE CD1 CE1 sing Y N 269 PHE CD1 HD1 sing N N 270 PHE CD2 CE2 doub Y N 271 PHE CD2 HD2 sing N N 272 PHE CE1 CZ doub Y N 273 PHE CE1 HE1 sing N N 274 PHE CE2 CZ sing Y N 275 PHE CE2 HE2 sing N N 276 PHE CZ HZ sing N N 277 PHE OXT HXT sing N N 278 PO4 P O1 doub N N 279 PO4 P O2 sing N N 280 PO4 P O3 sing N N 281 PO4 P O4 sing N N 282 PRO N CA sing N N 283 PRO N CD sing N N 284 PRO N H sing N N 285 PRO CA C sing N N 286 PRO CA CB sing N N 287 PRO CA HA sing N N 288 PRO C O doub N N 289 PRO C OXT sing N N 290 PRO CB CG sing N N 291 PRO CB HB2 sing N N 292 PRO CB HB3 sing N N 293 PRO CG CD sing N N 294 PRO CG HG2 sing N N 295 PRO CG HG3 sing N N 296 PRO CD HD2 sing N N 297 PRO CD HD3 sing N N 298 PRO OXT HXT sing N N 299 SER N CA sing N N 300 SER N H sing N N 301 SER N H2 sing N N 302 SER CA C sing N N 303 SER CA CB sing N N 304 SER CA HA sing N N 305 SER C O doub N N 306 SER C OXT sing N N 307 SER CB OG sing N N 308 SER CB HB2 sing N N 309 SER CB HB3 sing N N 310 SER OG HG sing N N 311 SER OXT HXT sing N N 312 THR N CA sing N N 313 THR N H sing N N 314 THR N H2 sing N N 315 THR CA C sing N N 316 THR CA CB sing N N 317 THR CA HA sing N N 318 THR C O doub N N 319 THR C OXT sing N N 320 THR CB OG1 sing N N 321 THR CB CG2 sing N N 322 THR CB HB sing N N 323 THR OG1 HG1 sing N N 324 THR CG2 HG21 sing N N 325 THR CG2 HG22 sing N N 326 THR CG2 HG23 sing N N 327 THR OXT HXT sing N N 328 TRP N CA sing N N 329 TRP N H sing N N 330 TRP N H2 sing N N 331 TRP CA C sing N N 332 TRP CA CB sing N N 333 TRP CA HA sing N N 334 TRP C O doub N N 335 TRP C OXT sing N N 336 TRP CB CG sing N N 337 TRP CB HB2 sing N N 338 TRP CB HB3 sing N N 339 TRP CG CD1 doub Y N 340 TRP CG CD2 sing Y N 341 TRP CD1 NE1 sing Y N 342 TRP CD1 HD1 sing N N 343 TRP CD2 CE2 doub Y N 344 TRP CD2 CE3 sing Y N 345 TRP NE1 CE2 sing Y N 346 TRP NE1 HE1 sing N N 347 TRP CE2 CZ2 sing Y N 348 TRP CE3 CZ3 doub Y N 349 TRP CE3 HE3 sing N N 350 TRP CZ2 CH2 doub Y N 351 TRP CZ2 HZ2 sing N N 352 TRP CZ3 CH2 sing Y N 353 TRP CZ3 HZ3 sing N N 354 TRP CH2 HH2 sing N N 355 TRP OXT HXT sing N N 356 TYR N CA sing N N 357 TYR N H sing N N 358 TYR N H2 sing N N 359 TYR CA C sing N N 360 TYR CA CB sing N N 361 TYR CA HA sing N N 362 TYR C O doub N N 363 TYR C OXT sing N N 364 TYR CB CG sing N N 365 TYR CB HB2 sing N N 366 TYR CB HB3 sing N N 367 TYR CG CD1 doub Y N 368 TYR CG CD2 sing Y N 369 TYR CD1 CE1 sing Y N 370 TYR CD1 HD1 sing N N 371 TYR CD2 CE2 doub Y N 372 TYR CD2 HD2 sing N N 373 TYR CE1 CZ doub Y N 374 TYR CE1 HE1 sing N N 375 TYR CE2 CZ sing Y N 376 TYR CE2 HE2 sing N N 377 TYR CZ OH sing N N 378 TYR OH HH sing N N 379 TYR OXT HXT sing N N 380 VAL N CA sing N N 381 VAL N H sing N N 382 VAL N H2 sing N N 383 VAL CA C sing N N 384 VAL CA CB sing N N 385 VAL CA HA sing N N 386 VAL C O doub N N 387 VAL C OXT sing N N 388 VAL CB CG1 sing N N 389 VAL CB CG2 sing N N 390 VAL CB HB sing N N 391 VAL CG1 HG11 sing N N 392 VAL CG1 HG12 sing N N 393 VAL CG1 HG13 sing N N 394 VAL CG2 HG21 sing N N 395 VAL CG2 HG22 sing N N 396 VAL CG2 HG23 sing N N 397 VAL OXT HXT sing N N 398 # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 2NSN 'PDB entries 2NSN, 1UBQ' 2 ? 'experimental model' PDB 1UBQ 'PDB entries 2NSN, 1UBQ' # _atom_sites.entry_id 4JQW _atom_sites.fract_transf_matrix[1][1] 0.016211 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016211 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011511 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol AS C N O P S # loop_