HEADER LYASE 22-MAR-13 4JSB TITLE CRYSTAL STRUCTURE OF TFU_1878, A PUTATIVE ENOYL-COA HYDRATASE FROM TITLE 2 THERMOBIFIDA FUSCA YX COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENOYL-COA HYDRATASE; COMPND 3 CHAIN: A; COMPND 4 EC: 4.2.1.17; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOBIFIDA FUSCA; SOURCE 3 ORGANISM_TAXID: 269800; SOURCE 4 STRAIN: YX; SOURCE 5 GENE: TFU_1878; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PSGC-HIS KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, NEW YORK STRUCTURAL GENOMICS KEYWDS 2 RESEARCH CONSORTIUM, NYSGRC, ENOYL-COA HYDRATASE/ISOMERASE FAMILY, KEYWDS 3 PUTATIVE ENOYL-COA HYDRATASE/ISOMERASE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR K.MIKOLAJCZAK,P.J.POREBSKI,D.R.COOPER,M.AHMED,M.STEAD,B.HILLERICH, AUTHOR 2 R.SEIDEL,M.ZIMMERMAN,J.B.BONANNO,S.C.ALMO,W.MINOR,NEW YORK AUTHOR 3 STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NYSGRC) REVDAT 4 27-NOV-24 4JSB 1 REMARK REVDAT 3 13-APR-22 4JSB 1 AUTHOR JRNL REMARK SEQADV REVDAT 3 2 1 LINK REVDAT 2 15-NOV-17 4JSB 1 REMARK REVDAT 1 19-JUN-13 4JSB 0 JRNL AUTH K.MIKOLAJCZAK,P.J.POREBSKI,D.R.COOPER,M.AHMED,M.STEAD, JRNL AUTH 2 B.HILLERICH,R.SEIDEL,M.ZIMMERMAN,J.B.BONANNO,S.C.ALMO, JRNL AUTH 3 W.MINOR JRNL TITL CRYSTAL STRUCTURE OF TFU_1878, A PUTATIVE ENOYL-COA JRNL TITL 2 HYDRATASE FROM THERMOBIFIDA FUSCA YX JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 32884 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.142 REMARK 3 R VALUE (WORKING SET) : 0.140 REMARK 3 FREE R VALUE : 0.164 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1734 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.87 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.92 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2329 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.02 REMARK 3 BIN R VALUE (WORKING SET) : 0.2350 REMARK 3 BIN FREE R VALUE SET COUNT : 110 REMARK 3 BIN FREE R VALUE : 0.2800 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1896 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 336 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.084 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.083 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.051 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.314 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2010 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2023 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2754 ; 1.829 ; 1.989 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4615 ; 0.938 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 280 ; 5.935 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 80 ;37.409 ;22.125 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 321 ;13.075 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;21.751 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 346 ; 0.122 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2303 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 443 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 30 REMARK 3 ORIGIN FOR THE GROUP (A): 49.0690 22.3730 79.3740 REMARK 3 T TENSOR REMARK 3 T11: 0.0789 T22: 0.0617 REMARK 3 T33: 0.0461 T12: -0.0208 REMARK 3 T13: 0.0061 T23: -0.0463 REMARK 3 L TENSOR REMARK 3 L11: 4.8277 L22: 6.5870 REMARK 3 L33: 1.5403 L12: -3.0325 REMARK 3 L13: -0.9015 L23: 2.0059 REMARK 3 S TENSOR REMARK 3 S11: -0.0915 S12: 0.0117 S13: 0.0767 REMARK 3 S21: 0.0833 S22: 0.2485 S23: -0.3810 REMARK 3 S31: -0.0712 S32: 0.2222 S33: -0.1571 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 31 A 79 REMARK 3 ORIGIN FOR THE GROUP (A): 42.9710 20.0030 72.6800 REMARK 3 T TENSOR REMARK 3 T11: 0.1324 T22: 0.0633 REMARK 3 T33: 0.1079 T12: -0.0034 REMARK 3 T13: 0.0081 T23: -0.0334 REMARK 3 L TENSOR REMARK 3 L11: 1.5801 L22: 2.2462 REMARK 3 L33: 1.1603 L12: 0.5274 REMARK 3 L13: -0.4035 L23: 0.5781 REMARK 3 S TENSOR REMARK 3 S11: -0.0067 S12: 0.0096 S13: 0.3276 REMARK 3 S21: -0.1331 S22: 0.0133 S23: 0.1046 REMARK 3 S31: -0.2301 S32: -0.1005 S33: -0.0067 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 80 A 101 REMARK 3 ORIGIN FOR THE GROUP (A): 36.3690 31.8630 60.7840 REMARK 3 T TENSOR REMARK 3 T11: 1.0708 T22: 0.4447 REMARK 3 T33: 1.4812 T12: 0.0987 REMARK 3 T13: -0.1931 T23: 0.2850 REMARK 3 L TENSOR REMARK 3 L11: 4.6945 L22: 0.0091 REMARK 3 L33: 8.9082 L12: 0.0109 REMARK 3 L13: -3.5963 L23: 0.1929 REMARK 3 S TENSOR REMARK 3 S11: -0.0127 S12: 0.7264 S13: 1.7651 REMARK 3 S21: -0.0555 S22: -0.0238 S23: 0.0734 REMARK 3 S31: -1.5956 S32: -0.9103 S33: 0.0365 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 102 A 211 REMARK 3 ORIGIN FOR THE GROUP (A): 42.6350 8.8180 64.2990 REMARK 3 T TENSOR REMARK 3 T11: 0.0403 T22: 0.0217 REMARK 3 T33: 0.0201 T12: 0.0093 REMARK 3 T13: 0.0108 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.8411 L22: 0.9341 REMARK 3 L33: 1.4348 L12: -0.0634 REMARK 3 L13: 0.1007 L23: 0.5138 REMARK 3 S TENSOR REMARK 3 S11: -0.0170 S12: 0.0536 S13: 0.0494 REMARK 3 S21: -0.0263 S22: 0.0206 S23: 0.0370 REMARK 3 S31: -0.0862 S32: -0.0467 S33: -0.0035 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 212 A 261 REMARK 3 ORIGIN FOR THE GROUP (A): 62.8570 3.8350 68.9120 REMARK 3 T TENSOR REMARK 3 T11: 0.0496 T22: 0.0079 REMARK 3 T33: 0.0876 T12: -0.0131 REMARK 3 T13: -0.0147 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 2.4849 L22: 1.3590 REMARK 3 L33: 2.4208 L12: -0.8278 REMARK 3 L13: -1.2846 L23: 0.4274 REMARK 3 S TENSOR REMARK 3 S11: 0.0589 S12: -0.0653 S13: 0.2340 REMARK 3 S21: -0.0147 S22: 0.0387 S23: -0.2620 REMARK 3 S31: -0.1058 S32: 0.0936 S33: -0.0975 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 262 A 269 REMARK 3 ORIGIN FOR THE GROUP (A): 78.8710 5.5230 75.9370 REMARK 3 T TENSOR REMARK 3 T11: 1.3494 T22: 1.2594 REMARK 3 T33: 0.5902 T12: -0.0201 REMARK 3 T13: -0.2531 T23: -0.4444 REMARK 3 L TENSOR REMARK 3 L11: 24.9996 L22: 4.8193 REMARK 3 L33: 44.0792 L12: 5.3299 REMARK 3 L13: 29.0392 L23: 0.0270 REMARK 3 S TENSOR REMARK 3 S11: 0.8765 S12: -0.5672 S13: -0.5103 REMARK 3 S21: 2.3427 S22: -0.5576 S23: -0.3179 REMARK 3 S31: -2.5557 S32: 0.2481 S33: -0.3189 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4JSB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-APR-13. REMARK 100 THE DEPOSITION ID IS D_1000078441. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-MAR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97957 REMARK 200 MONOCHROMATOR : DIAMOND [111] REMARK 200 OPTICS : BE LENSES/DIAMOND LAUE MONO REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32884 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.870 REMARK 200 RESOLUTION RANGE LOW (A) : 38.210 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 13.70 REMARK 200 R MERGE (I) : 0.12900 REMARK 200 R SYM (I) : 0.12900 REMARK 200 FOR THE DATA SET : 23.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000, MLPHARE, SHELXD, DM, BUCCANEER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05M AMMONIUM SULFATE, 0.05M BISTRIS, REMARK 280 30% V/V PENTAERYTHRITOL ETHOXYLATE (15/4 EO/OH) , PH 6.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 54.00250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.00250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.00250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.00250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 54.00250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.00250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 54.00250 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 54.00250 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 54.00250 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 54.00250 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 54.00250 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 54.00250 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 54.00250 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 54.00250 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 54.00250 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 54.00250 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 54.00250 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 54.00250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -176.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 108.00500 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -54.00250 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 54.00250 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 54.00250 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 54.00250 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 108.00500 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 725 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 735 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 SER A -13 REMARK 465 SER A -12 REMARK 465 GLY A -11 REMARK 465 VAL A -10 REMARK 465 ASP A -9 REMARK 465 LEU A -8 REMARK 465 GLY A -7 REMARK 465 THR A -6 REMARK 465 GLU A -5 REMARK 465 ASN A -4 REMARK 465 LEU A -3 REMARK 465 TYR A -2 REMARK 465 PHE A -1 REMARK 465 GLN A 0 REMARK 465 SER A 1 REMARK 465 ALA A 2 REMARK 465 LEU A 94 REMARK 465 ALA A 95 REMARK 465 ARG A 96 REMARK 465 ASP A 97 REMARK 465 PRO A 98 REMARK 465 ASN A 99 REMARK 465 SER A 100 REMARK 465 ALA A 270 REMARK 465 ALA A 271 REMARK 465 PRO A 272 REMARK 465 ARG A 273 REMARK 465 ARG A 274 REMARK 465 PRO A 275 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 3 CG CD OE1 NE2 REMARK 470 THR A 4 OG1 CG2 REMARK 470 LYS A 5 CG CD CE NZ REMARK 470 GLN A 56 CD OE1 NE2 REMARK 470 LYS A 83 CG CD CE NZ REMARK 470 GLU A 87 CD OE1 OE2 REMARK 470 PHE A 91 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A 106 CD OE1 NE2 REMARK 470 LYS A 267 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 49 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 4 -111.37 60.49 REMARK 500 THR A 169 7.64 83.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGRC-028034 RELATED DB: TARGETTRACK DBREF 4JSB A 2 275 UNP Q47NQ8 Q47NQ8_THEFY 2 275 SEQADV 4JSB MSE A -20 UNP Q47NQ8 EXPRESSION TAG SEQADV 4JSB HIS A -19 UNP Q47NQ8 EXPRESSION TAG SEQADV 4JSB HIS A -18 UNP Q47NQ8 EXPRESSION TAG SEQADV 4JSB HIS A -17 UNP Q47NQ8 EXPRESSION TAG SEQADV 4JSB HIS A -16 UNP Q47NQ8 EXPRESSION TAG SEQADV 4JSB HIS A -15 UNP Q47NQ8 EXPRESSION TAG SEQADV 4JSB HIS A -14 UNP Q47NQ8 EXPRESSION TAG SEQADV 4JSB SER A -13 UNP Q47NQ8 EXPRESSION TAG SEQADV 4JSB SER A -12 UNP Q47NQ8 EXPRESSION TAG SEQADV 4JSB GLY A -11 UNP Q47NQ8 EXPRESSION TAG SEQADV 4JSB VAL A -10 UNP Q47NQ8 EXPRESSION TAG SEQADV 4JSB ASP A -9 UNP Q47NQ8 EXPRESSION TAG SEQADV 4JSB LEU A -8 UNP Q47NQ8 EXPRESSION TAG SEQADV 4JSB GLY A -7 UNP Q47NQ8 EXPRESSION TAG SEQADV 4JSB THR A -6 UNP Q47NQ8 EXPRESSION TAG SEQADV 4JSB GLU A -5 UNP Q47NQ8 EXPRESSION TAG SEQADV 4JSB ASN A -4 UNP Q47NQ8 EXPRESSION TAG SEQADV 4JSB LEU A -3 UNP Q47NQ8 EXPRESSION TAG SEQADV 4JSB TYR A -2 UNP Q47NQ8 EXPRESSION TAG SEQADV 4JSB PHE A -1 UNP Q47NQ8 EXPRESSION TAG SEQADV 4JSB GLN A 0 UNP Q47NQ8 EXPRESSION TAG SEQADV 4JSB SER A 1 UNP Q47NQ8 EXPRESSION TAG SEQRES 1 A 296 MSE HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 296 GLY THR GLU ASN LEU TYR PHE GLN SER ALA GLN THR LYS SEQRES 3 A 296 ALA PRO THR ALA GLU GLU LEU ALA ALA ALA GLY LEU THR SEQRES 4 A 296 LEU THR ILE ASP GLY GLU VAL ALA ARG ILE THR LEU SER SEQRES 5 A 296 ARG PRO HIS ARG ARG ASN ALA MSE THR GLY ARG MSE TRP SEQRES 6 A 296 THR GLU LEU ALA ARG ILE GLY HIS THR LEU PRO GLN ALA SEQRES 7 A 296 VAL ARG ILE VAL VAL ILE THR GLY GLU GLY PRO THR PHE SEQRES 8 A 296 SER SER GLY ILE ASP LEU ASP MSE PHE GLN ALA GLY LYS SEQRES 9 A 296 VAL ASP GLY GLU PRO THR PRO PHE THR LEU LEU ALA ARG SEQRES 10 A 296 ASP PRO ASN SER THR ALA ALA LEU ASP GLN VAL ILE ALA SEQRES 11 A 296 SER TYR GLN GLU GLY PHE LEU TRP LEU ARG ARG ALA ASP SEQRES 12 A 296 ILE VAL SER ILE ALA ALA VAL ARG GLY HIS ALA ILE GLY SEQRES 13 A 296 ALA GLY PHE GLN LEU ALA LEU SER CYS ASP ILE ARG ILE SEQRES 14 A 296 LEU SER ASP THR ALA GLN LEU CYS MSE LYS GLU PRO ALA SEQRES 15 A 296 LEU GLY LEU VAL PRO ASP LEU THR GLY THR GLN PRO LEU SEQRES 16 A 296 VAL GLU LEU VAL GLY VAL ASN ARG ALA ILE GLU LEU CYS SEQRES 17 A 296 LEU THR ALA ARG THR ILE ASP ALA ALA GLU ALA ALA GLN SEQRES 18 A 296 LEU ARG LEU ALA GLU ARG VAL VAL ALA ASP ALA GLU LEU SEQRES 19 A 296 ASP ALA ALA VAL ASP ALA LEU VAL ALA GLN LEU LEU ALA SEQRES 20 A 296 VAL PRO ALA ALA ALA ALA ARG ALA THR LYS GLU LEU LEU SEQRES 21 A 296 LEU GLN ALA GLY ARG ASN ASP LEU ALA THR GLN ALA ARG SEQRES 22 A 296 VAL GLU ARG THR ALA GLN LEU ALA ARG LEU ALA GLU LEU SEQRES 23 A 296 ALA LYS ALA SER ALA ALA PRO ARG ARG PRO MODRES 4JSB MSE A 39 MET SELENOMETHIONINE MODRES 4JSB MSE A 43 MET SELENOMETHIONINE MODRES 4JSB MSE A 78 MET SELENOMETHIONINE MODRES 4JSB MSE A 157 MET SELENOMETHIONINE HET MSE A 39 8 HET MSE A 43 8 HET MSE A 78 8 HET MSE A 157 8 HET SO4 A 301 5 HET SO4 A 302 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 2 SO4 2(O4 S 2-) FORMUL 4 HOH *336(H2 O) HELIX 1 1 THR A 8 ALA A 15 1 8 HELIX 2 2 ARG A 32 ARG A 36 5 5 HELIX 3 3 THR A 40 LEU A 54 1 15 HELIX 4 4 ASP A 75 GLN A 80 5 6 HELIX 5 5 ALA A 102 TRP A 117 1 16 HELIX 6 6 LEU A 118 ARG A 120 5 3 HELIX 7 7 GLY A 135 CYS A 144 1 10 HELIX 8 8 LYS A 158 GLY A 163 5 6 HELIX 9 9 GLY A 170 GLY A 179 1 10 HELIX 10 10 GLY A 179 ALA A 190 1 12 HELIX 11 11 ALA A 195 LEU A 201 1 7 HELIX 12 12 ALA A 209 ALA A 211 5 3 HELIX 13 13 GLU A 212 ALA A 226 1 15 HELIX 14 14 PRO A 228 GLY A 243 1 16 HELIX 15 15 ASP A 246 SER A 269 1 24 SHEET 1 A 6 LEU A 17 ASP A 22 0 SHEET 2 A 6 VAL A 25 LEU A 30 -1 O ARG A 27 N THR A 20 SHEET 3 A 6 ILE A 60 GLY A 65 1 O VAL A 62 N ILE A 28 SHEET 4 A 6 VAL A 124 VAL A 129 1 O ILE A 126 N ILE A 63 SHEET 5 A 6 ILE A 146 SER A 150 1 O ILE A 146 N ALA A 127 SHEET 6 A 6 ARG A 206 VAL A 208 1 O ARG A 206 N LEU A 149 SHEET 1 B 2 LYS A 83 VAL A 84 0 SHEET 2 B 2 GLU A 87 PRO A 88 -1 O GLU A 87 N VAL A 84 SHEET 1 C 3 HIS A 132 ILE A 134 0 SHEET 2 C 3 GLN A 154 CYS A 156 1 O GLN A 154 N ALA A 133 SHEET 3 C 3 THR A 192 ASP A 194 -1 O ILE A 193 N LEU A 155 LINK C ALA A 38 N MSE A 39 1555 1555 1.33 LINK C MSE A 39 N THR A 40 1555 1555 1.32 LINK C ARG A 42 N MSE A 43 1555 1555 1.33 LINK C MSE A 43 N TRP A 44 1555 1555 1.34 LINK C ASP A 77 N MSE A 78 1555 1555 1.32 LINK C MSE A 78 N PHE A 79 1555 1555 1.32 LINK C CYS A 156 N MSE A 157 1555 1555 1.32 LINK C MSE A 157 N LYS A 158 1555 1555 1.30 SITE 1 AC1 7 ARG A 32 PRO A 33 HIS A 34 ARG A 35 SITE 2 AC1 7 HOH A 562 HOH A 675 HOH A 684 SITE 1 AC2 3 TYR A 111 ASP A 167 GLN A 258 CRYST1 108.005 108.005 108.005 90.00 90.00 90.00 P 21 3 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009259 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009259 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009259 0.00000